BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg481405
Length=3275
Score E
Sequences producing significant alignments: (Bits) Value
AT2G25540.1 | Symbols: CESA10 | cellulose synthase 10 | chr2:10... 4950 0.0
AT4G32410.1 | Symbols: CESA1, RSW1, AtCESA1 | cellulose synthas... 2736 0.0
> AT2G25540.1 | Symbols: CESA10 | cellulose synthase 10 | chr2:10866822-10872077
REVERSE LENGTH=3446
Length=3446
Score = 4950 bits (2680), Expect = 0.0
Identities = 3092/3287 (94%), Gaps = 43/3287 (1%)
Strand=Plus/Plus
Query 21 ATGGTTGCCGGGATCTTACCGGAGAAATGAGTTTGTTCGGAACAGAGACGATTCTGATGA 80
||||||| ||||||||||||||||| |||||||||||||||||||||||||||| |||||
Sbjct 1 ATGGTTG-CGGGATCTTACCGGAGATATGAGTTTGTTCGGAACAGAGACGATTCCGATGA 59
Query 81 CGGGCTAAAACTCTTGAAAGATCTGAATGGTCAGATATGTCAGATCTGTGGTGACGATAT 140
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 60 TGGGCTAAAACCCTTGAAAGATCTGAATGGTCAGATATGTCAGATCTGTGGTGACGATGT 119
Query 141 TGGACTCACTGAAACTGGCAATGTCTTTG-CGCTTGTAATGAATGTGGCTTCCCTTTGTG 199
||||||||| |||||||||||||||||| |||||||||||||||||| || ||||||||
Sbjct 120 TGGACTCACAAAAACTGGCAATGTCTTTGTCGCTTGTAATGAATGTGGTTTTCCTTTGTG 179
Query 200 TCCGTCTTGTTATGAGTATGAGAGGAAAGATGGATCTCAGTGTTGCTCGCAGTGCAAGAC 259
|| ||||||||||||||||||||||||||||||||||||||||||| |||| |||||| |
Sbjct 180 TCAGTCTTGTTATGAGTATGAGAGGAAAGATGGATCTCAGTGTTGCCCGCAATGCAAGGC 239
Query 260 TAGATTCAGACGGCACAATGGTCAGTAGGACTCCTGGAGTTGAAGGAGATGAAAAAGAGA 319
||||||||||||||||||||| | | | |||| ||||||||| |||||||||||||
Sbjct 240 TAGATTCAGACGGCACAATGG---G-A-G--TCCTCGAGTTGAAGTAGATGAAAAAGAGG 292
Query 320 ATGATGTCAATGATATCGAGAATGAGCTTGATTATACCCAGGTAAACAACAAGGCAAGAC 379
|||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||
Sbjct 293 ATGATGTCAATGATATCGAGAATGAGTTTGATTATACCCAGGGAAACAACAAGGCAAGAC 352
Query 380 TCCCACATCGCGCTGAAGAGTTCTCTTCGTCATCTCGAC-T--AGAATCCCAACCAATTT 436
||||||||||||||||||||||||||||||||||||||| | |||||| ||| |||
Sbjct 353 TCCCACATCGCGCTGAAGAGTTCTCTTCGTCATCTCGACATGAAGAATCTTTACCTGTTT 412
Query 437 CTCTTCTTACTCATGGCCATCCGGTTTCTGGAGAGATTCCTACGCCGGATAGGAAAGCTA 496
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 413 CTCTTCTTACTCATGGCCATCCGGTTTCTGGAGAGATTCCTACGCCGGATAGGAATGCTA 472
Query 497 CTTTGTCTCCTTGTATTGA-CC-C-AC-A----G---CTA-C--C---TG----TGCCTG 535
|| |||||||||||||||| || | || | | ||| | | || ||||||
Sbjct 473 CTCTGTCTCCTTGTATTGACCCACAACTACCTGGTATCTATCAACTTTTGCTTCTGCCTG 532
Query 536 TAAGAATCGTGGACCCATCAAAAGACTTGAACTCTTATGGGCTTGGGAATGTTGACTGGA 595
|||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 533 TAAGAATCTTGGACCCATCAAAAGACTTGAACTCTTATGGGCTTGTGAATGTTGACTGGA 592
Query 596 AAGAAAGGATTGAAGGTTGGAAGCTGAAGCAGGAGAAAAATATGATACAAATGACTGGTA 655
|| ||||||| |||||||||||||||||||||| || ||||||||||| ||||||||||
Sbjct 593 AAAAAAGGATCCAAGGTTGGAAGCTGAAGCAGGATAAGAATATGATACATATGACTGGTA 652
Query 656 AATACCATGAAGGGAAGGGAGGAGAATTTGAAGGGACCGGGTCAAATGGTGATGAACTCC 715
||||||||||||| ||||||||||||||||||||||| |||||||||||||| |||||||
Sbjct 653 AATACCATGAAGGAAAGGGAGGAGAATTTGAAGGGACAGGGTCAAATGGTGACGAACTCC 712
Query 716 AAATGGTTGATGATGCTCGAG-TTCCTATGAGCCGTGTGGTACATTTCCCATCCTCTCGC 774
||||||||||||||||||| | |||||||||||||||||||||||||||||||| |||||
Sbjct 713 AAATGGTTGATGATGCTCG-GCTTCCTATGAGCCGTGTGGTACATTTCCCATCCGCTCGC 771
Query 775 ATGACACCTTATCGTATAGTGATAGTTCTTCGGCTCATCATTTTGGGAGTCTTCTTGCAT 834
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 772 ATGACACCTTATCGTATAGTGATAGTTCTCCGGCTCATCATTTTGGGAGTCTTCTTGCAT 831
Query 835 TATCGTACAACTCATCCCGTGAAAGATGCATATGCCATGTGGTTGACCTCCGTTATTTGT 894
|||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||
Sbjct 832 TATCGTACAACTCATCCCGTGAAAGATGCATATGCCCTGTGGTTGACCTCAGTTATTTGT 891
Query 895 GAGATCTGGTTTGCCTTTTCGTGGCTTCTTGATCAGTTTCCAAAATGGTATCCCATTAAC 954
|||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||
Sbjct 892 GAGATCTGGTTTGCCTTTTCTTGGCTTCTTGATCAGTTCCCAAAATGGTATCCCATTAAC 951
Query 955 AGGGAGACTTTTCTTGACAGGCTTGCTTTAAGATATGATCGAGATGGTGAACCATCTCAG 1014
||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||
Sbjct 952 AGGGAGACTTTTCTTGACAGGCTTGCTTTAAGATACGATCGAGATGGTGAACCATCACAG 1011
Query 1015 CTAGCTCCCGTAGATGTGTTTGTTAGTACGGTGGACCCAATGAAAGAGCCTCCTCTTGTA 1074
||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1012 CTAGCTCCCGTGGATGTGTTTGTTAGTACGGTGGACCCGATGAAAGAGCCTCCTCTTGTA 1071
Query 1075 ACAGCAAACACGGTTCTCTCGATCCTTGCAGTGGACTACCCAGTAGA-AACAGTTGCGTG 1133
||||||||||| |||||||| |||||||| |||||||||||||| || || |||||||||
Sbjct 1072 ACAGCAAACACAGTTCTCTCAATCCTTGCTGTGGACTACCCAGTGGATAA-AGTTGCGTG 1130
Query 1134 TTATGTTTCAGATGATGGTTCAACTATGCTAACTTTTGAAGCCCTTTTTGAAACGGCAGA 1193
||| ||||| ||||| |||||| |||||||||||||||||||||||| ||||||||| ||
Sbjct 1131 TTACGTTTCGGATGACGGTTCAGCTATGCTAACTTTTGAAGCCCTTTCTGAAACGGCTGA 1190
Query 1194 GTTCGCAAAGAAATGGGTACCTTTTTGCAAGAAATTCAACATTGAACCTAGAGCTCCTGA 1253
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1191 GTTCTCAAAGAAATGGGTACCTTTTTGCAAGAAATTCAACATTGAACCTAGAGCTCCTGA 1250
Query 1254 GTTCTATTTTTCCCAGAAGATAGATTACTTGAAGGATAAGATCCAACCTTCTTTTGTCAA 1313
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1251 GTTCTATTTTTCCCAGAAGATAGATTACTTGAAGGACAAGATCCAACCTTCTTTTGTCAA 1310
Query 1314 AGAGAGGCGGGCAATGAAGAGAGAGTATGAGGAGTTTAAAGTGAGGATCAATATCCTTGT 1373
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1311 AGAGAGACGGGCAATGAAGAGAGAGTATGAGGAGTTTAAAGTGAGGATCAATATCCTCGT 1370
Query 1374 TGCTAAAGCACAGAAGATTCCTGAAGATGGCTGGACAATGGATGATGGTACACCCTGGCC 1433
||||||||||||||||||||||||||||| ||||||||||| |||||||| |||||||
Sbjct 1371 CGCTAAAGCACAGAAGATTCCTGAAGATGGTTGGACAATGGAGGATGGTACGTCCTGGCC 1430
Query 1434 CGGAAACAACCCTAGAGACCATCCTGGGATGATTCAGGTTTTCTTAGGCCATAGTGGAGG 1493
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1431 TGGTAACAACCCTAGAGACCATCCTGGGATGATTCAGGTTTTCTTAGGCCATAGTGGAGG 1490
Query 1494 TCTGGATACCGATGGAAATGAGCTACCTAGGCTCATCTATGTGTCCCGAGAAAAGCGTCC 1553
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1491 TCTGGATACCGATGGAAATGAGCTACCTAGGCTCATCTATGTGTCCCGTGAAAAGCGTCC 1550
Query 1554 TGGATTTCAGCACCACAAGAAGGCTGGAGCTATGAATGCCCTGATCCGTGTTTCTGCTGT 1613
|||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||
Sbjct 1551 TGGATTTCAGCACCACAAGAAGGCTGGAGCTATGAATGCCTTGATTCGTGTTTCTGCTGT 1610
Query 1614 TCTTACTAATGGGGCATATCTTTTAAACGTTGATTGTGATCATTACTTCAACAACAGCAA 1673
||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1611 TCTTACTAATGGGGCGTATCTTTTGAACGTTGATTGTGATCATTACTTCAACAACAGCAA 1670
Query 1674 GGCGATTAAGGAAGCCATGTGTTTCATGATGGACCCTGCAATCGGAAAGAAGTGCTGCTA 1733
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1671 GGCGATTAAGGAAGCCATGTGTTTCATGATGGACCCTGCAATCGGAAAGAAGTGTTGCTA 1730
Query 1734 CGTGCAGTTTCCACAACGTTTCGATGGTATTGACTTGCATGATCGATACGCCAACAGGAA 1793
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1731 CGTGCAGTTTCCACAACGTTTCGATGGTATTGACTTGCATGATCGATACGCCAACAGGAA 1790
Query 1794 TATTGTCTTCTTTGATATTAACTTGAAGGGGTTAGATGGTATCCAAGGTCCTGTGTATGT 1853
|| ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||
Sbjct 1791 TACTGTCTTCTTTGATATCAACTTGAAGGGGTTAGATGGTATACAAGGTCCTGTGTATGT 1850
Query 1854 GGGCACTGGTTGCTGTTTCAACAGGCAGGCCCTGTATGGGTATGATCCTGTTCTAACAGA 1913
||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1851 GGGCACTGGCTGCTGTTTCAACAGGCAGGCCTTGTATGGGTATGATCCTGTTCTAACAGA 1910
Query 1914 GGAAGATCTTGAGCCTAATATAATTATAAAGAGCTGTTTTGGCTCGAGGAAGAAAGGAAA 1973
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1911 GGAAGATCTTGAGCCTAATATAATTGTAAAGAGCTGTTTTGGCTCGAGGAAGAAAGGAAA 1970
Query 1974 GAGAAGCAAAATACCTAACTATGACCATAACAGAAGCATCAAGAGAAGTGACTCCAACGT 2033
||| || ||||||||||||||||| ||||||||||||| ||||||||||||||||||||
Sbjct 1971 GAGTAGAAAAATACCTAACTATGAAGATAACAGAAGCATTAAGAGAAGTGACTCCAACGT 2030
Query 2034 TCCACTTTTCAGTATGGAAGACATTGACGAGGGTGTTGAAGGCTATGATGATGAGATGTC 2093
||||||||||| |||||||||||||||||||| |||||||||||||| |||||||||||
Sbjct 2031 TCCACTTTTCAATATGGAAGACATTGACGAGGACGTTGAAGGCTATGAGGATGAGATGTC 2090
Query 2094 TCTTCTAGTGTCTCAGAAAAGGCTGGAGAAGCGTTTTGGTCAGTCACCAGTGTTTATTGC 2153
||||||||| || ||||||||||| || ||||||||||| ||||| ||||||||||||||
Sbjct 2091 TCTTCTAGTATCCCAGAAAAGGCTAGAAAAGCGTTTTGGCCAGTCGCCAGTGTTTATTGC 2150
Query 2154 GGCTACCTTCATGGAACAAGGAGGTCTTCCACCATCAACGAACCCCACGACTCTTCTCAA 2213
|||||||||||||||||||||||||||||| || |||| |||||| ||||||||||||
Sbjct 2151 AGCTACCTTCATGGAACAAGGAGGTCTTCCATCAACAACCAACCCCTTGACTCTTCTCAA 2210
Query 2214 GGAGGCGATTCATGTCATAAGCTGTGGTTATGAGGCCAATACTGAATGGGGCAAAGAGAT 2273
||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||
Sbjct 2211 GGAGGCGATTCATGTCATAAGCTGTGGTTATGAGGCCAAGACTGATTGGGGCAAAGAGAT 2270
Query 2274 CGGGTGGATCTACGGTTCTGTGACAGAAGATATTCTTACTGGATTCAAGATGCATGCGAG 2333
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 2271 CGGGTGGATCTACGGTTCTGTGACAGAAGATATTCTTACTGGATTCAAGATGCATGCAAG 2330
Query 2334 GGGTTGGATATCAATCTACTGCGTGCCTCCACGCCCTGCGTTCAAGGGATCCGCACCCAT 2393
||||||||||||||||||||| || ||| |||||||||||||||||||||||||||||||
Sbjct 2331 GGGTTGGATATCAATCTACTGTGTTCCTTCACGCCCTGCGTTCAAGGGATCCGCACCCAT 2390
Query 2394 CAATCTCTCTGACCGCTTGAACCAAGTTCTTCGGTGGGCTTTGGGATCTATCGAGATTCT 2453
|||||||||||| || ||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct 2391 CAATCTCTCTGATCGTTTGAACCAAGTTCTTCGATGGGCTTTGGGGTCTATCGAGATTCT 2450
Query 2454 TCTGAGCAGACATTGCCCTATATGGTCTGGCTATAATGGAAGGTTGAAACTGTTGGAGAG 2513
|||||| ||||||||||||||||||| |||||||||||| ||||||||||| ||||||||
Sbjct 2451 TCTGAGTAGACATTGCCCTATATGGTATGGCTATAATGGGAGGTTGAAACTTTTGGAGAG 2510
Query 2514 AATTGCCTACATCAATACCATAGTCTATCCAATTACATCCATCCCGCTCCTCGCCTATTG 2573
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2511 AATTGCCTACATCAATACCATAGTCTATCCAATTACATCCATCCCGCTCCTCGCCTATTG 2570
Query 2574 TATGCTTCCAGCTTTTTGCCTCATCACCAACAAGTTCATCATACCAGAGATAAGCAACTC 2633
|||||||||||||||||||||||| ||||||| ||||||||||||||||||||| ||||
Sbjct 2571 TATGCTTCCAGCTTTTTGCCTCATAACCAACACGTTCATCATACCAGAGATAAGTAACT- 2629
Query 2634 T-GCGTCCTTGTGTTTCATACTGCTATTTACATCCATCTACGCATCGGCAATCTTGGAGC 2692
| ||| |||||||||||| ||||||||| |||||||||||||||| |||||||||||||
Sbjct 2630 TAGCGAGCTTGTGTTTCATGCTGCTATTTGCATCCATCTACGCATCAGCAATCTTGGAGC 2689
Query 2693 TCAGATGGAGTGATGTGGCCCTTGAAGAATGGTGGAGGAACGAGCAGTTTTGGGTAATCG 2752
||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 2690 TCAAATGGAGTGATGTGGCCCTTGAAGACTGGTGGAGGAACGAGCAGTTTTGGGTAATCG 2749
Query 2753 GTGGAACCCCGGCTCATCTTTTTGTAGTGTTTCAAGGTCTACTCAAAGTTTTTGCAGGGA 2812
||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 2750 GTGGAACATCGGCTCATCTTTTTGCAGTGTTTCAAGGTCTACTCAAAGTTTTTGCAGGGA 2809
Query 2813 TAGACACAAACTTCACGGTCACATCGAAAGCCTCTGACGAAGATGGAGACTTTGCAGAGC 2872
|||||||||||||||| |||||||| |||||||| || ||||||||||||||||||||||
Sbjct 2810 TAGACACAAACTTCACAGTCACATCAAAAGCCTCAGATGAAGATGGAGACTTTGCAGAGC 2869
Query 2873 TTTACGTCTTCAAATGGACGTCTCTTCTCATCCCACCAACCACTAACTTATTGGTCAACT 2932
||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||
Sbjct 2870 TTTACGTCTTCAAATGGACGTCTCTTCTCATCCCACCAACCACTATCTTACTGGTCAACC 2929
Query 2933 TTGTCGGTATTGTGGTTGGGGTCTCCTATGCAATAAACAGTGGCTACCAATCGTGGGGAC 2992
||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct 2930 TTGTCGGTATTGTGGCCGGTGTCTCCTATGCAATAAACAGTGGCTACCAATCGTGGGGAC 2989
Query 2993 CTCTCATGGGAAAGCTCTTTTTTGCTCTTTGGGTTGTTGCTCATCTTTACCCTTTCTTGA 3052
||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||
Sbjct 2990 CTCTCATGGGAAAGCTCCTTTTTGCTTTTTGGGTTGTTGCTCATCTTTACCCTTTCTTGA 3049
Query 3053 AGAGACTTTTGGGAAGACAGAACCGGACTCCGACCATTGTCATTGTCTGGTCTGCGCTTC 3112
|| | |||||||| ||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 3050 AGGGTCTTTTGGGCAGACAGAACCGGACTCCGACCATTGTCATTGTCTGGTCTGCACTTC 3109
Query 3113 TTGCATCCATCTTCTCATTACTTTGGGTCCGAATCAACCCCTTTGTTTCCACCACTGGAG 3172
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 3110 TTGCATCCATCTTCTCATTACTTTGGGTCCGAATCAACCCCTTTGTTTCCACCACTGGGG 3169
Query 3173 TTATGAGCAACAGTTTCATGGGACAGTGAGCTGCCCACTGTTATG-TTCAGCCCTAT--A 3229
|||||||||||||||||||||| ||||||||||| ||| ||||| ||||||||| | |
Sbjct 3170 TTATGAGCAACAGTTTCATGGGTGAGTGAGCTGCCAACTATTATGCTTCAGCCCTGTTTA 3229
Query 3230 TAAATGTGTGTGTGGATATATAA-TAGGAAACCCCATTAATCTAAGA 3275
|||||| ||||||||||||||| ||| |||||||||||||||||||
Sbjct 3230 TAAATGAGTGTGTGGATATATACGTAGTAAACCCCATTAATCTAAGA 3276
> AT4G32410.1 | Symbols: CESA1, RSW1, AtCESA1 | cellulose synthase
1 | chr4:15640620-15646665 REVERSE LENGTH=3912
Length=3912
Score = 2736 bits (1481), Expect = 0.0
Identities = 2307/2704 (85%), Gaps = 64/2704 (2%)
Strand=Plus/Plus
Query 487 AGGAAAGCTACTTT-GTCTCCTTGTATTGACCCACAGCTACCTGTGCCTGTAAGAATCGT 545
||||| |||| ||| ||||| | |||||| |||| || |||||| ||||||||||||||
Sbjct 800 AGGAATGCTA-TTTCATCTCCATATATTGATCCACGGCAACCTGTCCCTGTAAGAATCGT 858
Query 546 GGACCCATCAAAAGACTTGAACTCTTATGGGCTTGGGAATGTTGACTGGAAAGAAAGGA- 604
|||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| ||
Sbjct 859 GGACCCGTCAAAAGACTTGAACTCTTATGGGCTTGGTAATGTTGACTGGAAAGAAA-GAG 917
Query 605 TTGAAGGTTGGAAGCTGAAGCAGGAGAAAAATATGATACAAATGACTGGTAAATACCATG 664
||||||| ||||||||||||||||||||||||||| |||| |||||||||||||||||||
Sbjct 918 TTGAAGGCTGGAAGCTGAAGCAGGAGAAAAATATGTTACAGATGACTGGTAAATACCATG 977
Query 665 AAGGGAAGGGAGGAGAATTTGAAGGGACCGGGTCAAATGGTGATGAACTCCAAATGGTTG 724
||||||| ||||||||| |||||||||| || || ||||| || ||||||||||||| ||
Sbjct 978 AAGGGAAAGGAGGAGAAATTGAAGGGACTGGTTCCAATGGCGAAGAACTCCAAATGGCTG 1037
Query 725 ATGATGCTCGAGTTCCTATGAGCCGTGTGGTACATTTCCCATCCTCTCGCATGACACCTT 784
||||| | || |||||||||| |||||||| | | ||||||| |||||| | || ||||
Sbjct 1038 ATGATACACGTCTTCCTATGAGTCGTGTGGTGCCTATCCCATCTTCTCGCCTAACCCCTT 1097
Query 785 ATCGTATAGTGA-TAGTTCTTCGGCTCATCATTTTGGGAGTCTTCTTGCATTATCGTACA 843
|||| | |||| || |||| ||||| ||||| ||| | |||||||||| |||||||||
Sbjct 1098 ATCGGGTTGTGATTA-TTCTCCGGCTTATCATCTTGTGTTTCTTCTTGCAATATCGTACA 1156
Query 844 ACTCATCCC-GTGAAAGATGCATATGCC-ATGTGGTTGACCTCCGTTATTTGTGAGATCT 901
||||| ||| |||||| |||||||| || ||||||||||||| ||||| ||||||||||
Sbjct 1157 ACTCA-CCCTGTGAAAAATGCATAT-CCTTTGTGGTTGACCTCGGTTATCTGTGAGATCT 1214
Query 902 GGTTTGCCTTTTCGTGGCTTCTTGATCAGTTTCCAAAATGGTATCCCATTAACAGGGAGA 961
||||||| ||||| |||||||||||||||||||| |||||||| ||||||||||||||||
Sbjct 1215 GGTTTGCATTTTCTTGGCTTCTTGATCAGTTTCCCAAATGGTACCCCATTAACAGGGAGA 1274
Query 962 CTTTTCTTGACAGGCTTGCTTTAAGATATGATCGAGATGGTGAACCATCTCAGCTAGCTC 1021
||| ||||||| | || ||| |||||||||||||||| ||||||||||| ||||| | ||
Sbjct 1275 CTTATCTTGACCGTCTCGCTATAAGATATGATCGAGACGGTGAACCATCACAGCTCGTTC 1334
Query 1022 CCGTAGATGTGTTTGTTAGTACGGTGGACCCAATGAAAGAGCCTCCTCTTGTAACAGCAA 1081
| || ||||||||||||||||| ||||||||| ||||||||||||| ||||| |||||||
Sbjct 1335 CTGTTGATGTGTTTGTTAGTACAGTGGACCCATTGAAAGAGCCTCCCCTTGTTACAGCAA 1394
Query 1082 ACACGGTTCTCTCGATCCTTGCAGTGGACTACCCAGTAGA-AACAGTTGCGTGTTATGTT 1140
|||| ||||||||||| ||| | ||||||||||| ||||| || ||| || |||||||||
Sbjct 1395 ACACAGTTCTCTCGATTCTTTCTGTGGACTACCCGGTAGATAA-AGTAGCCTGTTATGTT 1453
Query 1141 TCAGATGATGGTTCAACTATGCTAACTTTTGAAGCCCTTTTTGAAACGGCAGAGTTCGCA 1200
||||||||||||||| ||||||| || |||||| |||||| |||||| || ||||| |||
Sbjct 1454 TCAGATGATGGTTCAGCTATGCTTACCTTTGAATCCCTTTCTGAAACCGCTGAGTTTGCA 1513
Query 1201 AAGAAATGGGTACCTTTTTGCAAGAAATTCAACATTGAACCTAGAGCTCCTGAGTTCTAT 1260
|||||||||||||| ||||||||||||||||||||||||||||| || ||||| ||||||
Sbjct 1514 AAGAAATGGGTACCATTTTGCAAGAAATTCAACATTGAACCTAGGGCCCCTGAATTCTAT 1573
Query 1261 TTTTCCCAGAAGATAGATTACTTGAAGGATAAGATCCAACCTTCTTTTGTCAAAGAGAGG 1320
||| ||||||||||||||||||||||||| ||||||||||| |||||||| |||||| |
Sbjct 1574 TTTGCCCAGAAGATAGATTACTTGAAGGACAAGATCCAACCGTCTTTTGTTAAAGAGCGA 1633
Query 1321 CGGGCAATGAAGAGAGAGTATGAGGAGTTTAAAGTGAGGATCAATA-TCCTTGTTGCTAA 1379
|| || ||||||||||||||||| ||||||||||||||||| ||| || ||||||| ||
Sbjct 1634 CGAGCTATGAAGAGAGAGTATGAAGAGTTTAAAGTGAGGATAAATGCTC-TTGTTGCCAA 1692
Query 1380 AGCACAGAAGATTCCTGAAGATGGCTGGACAATGGATGATGGTACACCCTGGCCCGGAAA 1439
||||||||| || |||||||| |||||||||||| | |||||||| |||||||| || ||
Sbjct 1693 AGCACAGAAAATCCCTGAAGAAGGCTGGACAATGCAGGATGGTACTCCCTGGCCTGGTAA 1752
Query 1440 CAACCCTAGAGACCATCCTGGGATGATTCAGGTTTTCTTAGGCCATAGTGGAGGTCTGGA 1499
|||| ||||||| |||||||| ||||| ||||| ||||||||||||||||| ||||||||
Sbjct 1753 CAACACTAGAGATCATCCTGGAATGATACAGGTGTTCTTAGGCCATAGTGGGGGTCTGGA 1812
Query 1500 TACCGATGGAAATGAGCTACCTAGGCTCATCTATGTGTCCCGAGAAAAGCGTCCTGGATT 1559
|||||||||||||||||| ||||| ||||||||||| || || |||||||| ||||||||
Sbjct 1813 TACCGATGGAAATGAGCTGCCTAGACTCATCTATGTTTCTCGTGAAAAGCGGCCTGGATT 1872
Query 1560 TCAGCACCACAAGAAGGCTGGAGCTATGAATGCCCTGATCCGTGTTTCTGCTGTTCTTAC 1619
||| |||||||| |||||||||||||||||||| |||||||||| ||||||||||||||
Sbjct 1873 TCAACACCACAAAAAGGCTGGAGCTATGAATGCATTGATCCGTGTATCTGCTGTTCTTAC 1932
Query 1620 TAATGGGGCATATCTTTTAAACGTTGATTGTGATCATTACTTCAACAACAGCAAGGCGAT 1679
||||| ||||||||||| ||||| ||||||||||||||||| || ||||| ||||| ||
Sbjct 1933 CAATGGAGCATATCTTTTGAACGTGGATTGTGATCATTACTTTAATAACAGTAAGGCTAT 1992
Query 1680 TAAGGAAGCCATGTGTTTCATGATGGACCCTGCAATCGGAAAGAAGTGCTGCTACGTGCA 1739
||| ||||| |||||||||||||||||||| || || ||||||||||||||||| || ||
Sbjct 1993 TAAAGAAGCTATGTGTTTCATGATGGACCCGGCTATTGGAAAGAAGTGCTGCTATGTCCA 2052
Query 1740 GTTTCCACAACGTTTCGATGGTATTGACTTGCATGATCGATACGCCAACAGGAATATTGT 1799
||| || |||||||| || |||||||| ||||| |||||||| |||||||||||||| ||
Sbjct 2053 GTTCCCTCAACGTTTTGACGGTATTGATTTGCACGATCGATATGCCAACAGGAATATAGT 2112
Query 1800 CTTCTTT-GATATTAACTTGAAGGGGTTAGATGGTATCCAAGGTCCTGTGTATGTGGGCA 1858
||| ||| ||||||||| |||||||||| ||||||||||| ||||| || |||||||| |
Sbjct 2113 CTT-TTTCGATATTAACATGAAGGGGTTGGATGGTATCCAGGGTCCAGTATATGTGGGTA 2171
Query 1859 CTGGTTGCTGTTTCAACAGGCAGGCCCTGTATGGGTATGATCCTGTTCTAACAGAGGAAG 1918
||||||| ||||| || |||||||| || |||||||||||||||||| | || || ||||
Sbjct 2172 CTGGTTGTTGTTTTAATAGGCAGGCTCTATATGGGTATGATCCTGTTTTGACGGAAGAAG 2231
Query 1919 ATCTT-GAGCCTAATATAATTATAAAGAGCTGTTTTGGCTCGAGGAAGAAAGG-AAAGAG 1976
|| || || || ||||| ||| | |||||||||| || || ||||||||||| ||| ||
Sbjct 2232 AT-TTAGAACCAAATATTATTGTCAAGAGCTGTTGCGGGTCAAGGAAGAAAGGTAAA-AG 2289
Query 1977 AAGCAA-AA-TACCTAACTATGACCATAACAGAAGCATCAAGAGAAGTGACTCCAACGTT 2034
||||| || || |||||| || | | ||| ||||||| |||||||||||||| | |
Sbjct 2290 TAGCAAGAAGTA--TAACTACGAAAAGAGGAGAGGCATCAACAGAAGTGACTCCAATGCT 2347
Query 2035 CCACTTTTCAGTATGGAAGACATTGACGAGGGTGTTGAAGGCTATGATGATGAGATGTCT 2094
|||||||||| |||||| ||||| || |||||| ||||||| ||||||||||||| ||||
Sbjct 2348 CCACTTTTCAATATGGAGGACATCGATGAGGGTTTTGAAGGTTATGATGATGAGAGGTCT 2407
Query 2095 CTTCTAGTGTCTCAGAAAAG-GCTGGAGAAGCGTTTTGGTCAGTCACCAGTGTTTATTGC 2153
||||| |||| |||| || | | |||||||||||||||||||| || || ||||||||
Sbjct 2408 ATTCTAATGTCCCAGAGGAGTG-TAGAGAAGCGTTTTGGTCAGTCGCCGGTATTTATTGC 2466
Query 2154 GGCTACCTTCATGGAACAAGGAGGTC-TTCCACCATCAACGAACCCCACGACTCTTCTCA 2212
||| ||||||||||||||||| || | |||||||| |||| || ||| | |||||||| |
Sbjct 2467 GGCAACCTTCATGGAACAAGGCGG-CATTCCACCAACAACCAATCCCGCTACTCTTCTGA 2525
Query 2213 AGGAGGCGATTCATGTCATAAGCTGTGGTTATGAGGCCAATACTGAATGGGGCAAAGAGA 2272
||||||| |||||||| |||||||||||||| || | ||| |||||||||||||||||||
Sbjct 2526 AGGAGGCTATTCATGTTATAAGCTGTGGTTACGAAGACAAGACTGAATGGGGCAAAGAGA 2585
Query 2273 TCGGGTGGATCTACGGTTCTGTGACAGAAGATATTCTTACTGGATTCAAGATGCATGCGA 2332
| || |||||||| ||||| ||||| ||||||||||||||||| ||||||||||||||
Sbjct 2586 TTGGTTGGATCTATGGTTCCGTGACGGAAGATATTCTTACTGGGTTCAAGATGCATGCCC 2645
Query 2333 GGGGTTGGATATCAATCTACTGCG-TGCCTCCACGCCCTGCGTTCAAGGGATCCGCACCC 2391
||||||||||||| ||||||||| | |||||||||||||||||||||||||| |||||
Sbjct 2646 GGGGTTGGATATCGATCTACTGCAAT-CCTCCACGCCCTGCGTTCAAGGGATCTGCACCA 2704
Query 2392 ATCAATCTCTCTGACCGCTTGAACCAAGTTCTTCGGTGGGCTTTGGGATCTATCGAGATT 2451
|||||||| ||||| || ||||||||||||||||| ||||||||||||||||||||||||
Sbjct 2705 ATCAATCTTTCTGATCGTTTGAACCAAGTTCTTCGATGGGCTTTGGGATCTATCGAGATT 2764
Query 2452 CTTCTGAGCAGACATTGCCCTATATGGTCTGGCTATAATGGAAGGTTGAAACTGTTGGAG 2511
||||| ||||||||||| ||||| |||| ||| || |||||||||||| ||| ||||||
Sbjct 2765 CTTCTTAGCAGACATTGTCCTATCTGGTATGGTTACCATGGAAGGTTGAGACTTTTGGAG 2824
Query 2512 AGAATTGCCTACATCAATACCATAGTCTATCCAATTACATCCATCCCGCTCCTCGCCTAT 2571
|| || || || ||||| ||||| |||||||| |||||||||||||| || | || |||
Sbjct 2825 AGGATCGCTTATATCAACACCATCGTCTATCCTATTACATCCATCCCTCTTATTGCGTAT 2884
Query 2572 TGTATGCTTCCAGCTTTTTGCCTCATCACCAACA-AGTTCATCATACCAGAGATAAGCAA 2630
||||| ||||| |||||||| ||||||||| ||| | ||||||||||| |||||||||||
Sbjct 2885 TGTATTCTTCCCGCTTTTTGTCTCATCACCGACAGA-TTCATCATACCCGAGATAAGCAA 2943
Query 2631 CT-CTGCG--TCCTTGTGTTTCATACTGCTATTTACATC-CA-T--CTACG-CATCGGCA 2682
|| | ||| | ||| ||| ||| || || || |||| || | || | | | || |
Sbjct 2944 CTAC-GCGAGTATTTG-GTT-CATTCTACTCTT--CATCTCAATTGCTGTGAC-T-GG-A 2995
Query 2683 ATCTTGGAGCTCAGATGGAGTGATGTG-GCCCTTGAAGAATGGTGGAGGAACGAGCAGTT 2741
||| ||||||| |||||||| | |||| || |||| || ||||||||||||||||||||
Sbjct 2996 ATCCTGGAGCTGAGATGGAGCGGTGTGAGCA-TTGAGGATTGGTGGAGGAACGAGCAGTT 3054
Query 2742 TTGGGTAATCGGTGGAACC-CCGGCTCATCTTTTTG-TAGTGTTTCAAGGTCTACTCAAA 2799
||||| || ||||| || ||| | |||||||||| | || || ||||||||||| ||
Sbjct 3055 CTGGGTCATTGGTGGCACATCCGCC-CATCTTTTTGCT-GTCTTCCAAGGTCTACTTAAG 3112
Query 2800 GTTTTTGCAGGGATAGACACAAACTTCACGGTCACATCGAAAGCCTCTGACGAAGATGGA 2859
||| |||| || || ||||| |||||||| || ||||| |||||| | |||||||||||
Sbjct 3113 GTTCTTGCTGGTATCGACACCAACTTCACCGTTACATCTAAAGCCACAGACGAAGATGGG 3172
Query 2860 GACTTTGCAGAGCTTTACGTCTTCAAATGGAC-GTCTCTTCTCATCCCACCAACCACTAA 2918
|| |||||||| || ||| ||||||||||||| | |||||||||| |||||||||||
Sbjct 3173 GATTTTGCAGAACTCTACATCTTCAAATGGACAG-CTCTTCTCATTCCACCAACCACCGT 3231
Query 2919 CTTA-TTGGTCAACTTTGTCGGTATTGTGGTTGGGGTCTCCTATGCAATAAACAGTGGCT 2977
| || ||| | ||| | | || ||||||| ||| ||||| ||||| ||||||||||||
Sbjct 3232 CCTACTTG-TGAACCTCATAGGCATTGTGGCTGGTGTCTCTTATGCTGTAAACAGTGGCT 3290
Query 2978 ACCAATCGTGGGGACCTCTCAT-GGGAAAGCTCTTTTTTGCTCTT-TGGGTTGTTGCTCA 3035
|||| |||||||| || || | ||||| |||||| || || ||| |||||| |||| ||
Sbjct 3291 ACCAGTCGTGGGGTCCGCTTTTCGGGAA-GCTCTTCTTCGC-CTTATGGGTTATTGCCCA 3348
Query 3036 TCTTTACCCTTTCTTGAAGAGA-CTTTTGGGAAGACAGAACCGGACTCCGACCATTGTCA 3094
||| |||||||||||||| || || ||||||||||| ||||| || || ||||| ||||
Sbjct 3349 TCTCTACCCTTTCTTGAA-AGGTCTGTTGGGAAGACAAAACCGAACACCAACCATCGTCA 3407
Query 3095 TTGTCTGGTCTGCGCTTCTTGCATCCATCTTCTCATTACTTTGGGTCCGAATCAACCCCT 3154
|||||||||||| ||||| || ||||||||||| || ||||||||| | ||||| ||||
Sbjct 3408 TTGTCTGGTCTGTTCTTCTCGCCTCCATCTTCTCGTTGCTTTGGGTCAGGATCAATCCCT 3467
Query 3155 TTGT 3158
||||
Sbjct 3468 TTGT 3471
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 162942230864
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5