BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg481430 Length=485 Score E Sequences producing significant alignments: (Bits) Value AT2G25780.1 | Symbols: | Protein of unknown function (DUF1677)... 660 0.0 > AT2G25780.1 | Symbols: | Protein of unknown function (DUF1677) | chr2:10995141-10996024 FORWARD LENGTH=591 Length=591 Score = 660 bits (357), Expect = 0.0 Identities = 444/485 (92%), Gaps = 10/485 (2%) Strand=Plus/Plus Query 10 ATTCTTCGAAAGGCCTTCTCTGATGTTTCTTTGGAGAGAAAACGAAATATAAGCGAAAAA 69 ||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| Sbjct 44 ATTCTTCGAAAGGCCTTCTCTGATGTTTCCTTGGAGAGAAAACGAAATATAAGCCAAAAC 103 Query 70 GACGAGCAAGAACAAGACCGAGAGCTAGAAGTGAAGCAAGTGAAATGTGATTGTTGTGGT 129 ||||||||||||||||| ||||| |||||||||| |||||||||||||||||||||||| Sbjct 104 GACGAGCAAGAACAAGAAGGAGAGGTAGAAGTGAACCAAGTGAAATGTGATTGTTGTGGT 163 Query 130 ATAGAAGAAGAATGTACTATGCAATACATAGACAAAGTTA-AAGACTTGTATTCAGGCAA 188 ||||||||||||||||||||||||||||||| |||||| | || |||||||||||||||| Sbjct 164 ATAGAAGAAGAATGTACTATGCAATACATAGCCAAAGTCAGAA-ACTTGTATTCAGGCAA 222 Query 189 TTGGGTTTGTGGTCTTTGTGCCGTAGTGGTCACTGAGAGATTTCGGAAAGATCCCCCTAC 248 |||||||||||||||||||| || ||| || ||||||||| ||||||||||||| || | Sbjct 223 TTGGGTTTGTGGTCTTTGTGGCGAAGTAGTAACTGAGAGACTTCGGAAAGATCCTCCAAT 282 Query 249 AGCCACTGGGATACAAGAAGCCTTTGACTGGCACAAAGGAATTTGTGATGCCTTCAATTC 308 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 283 AGCCGCTGGGATACAAGAAGCCTTTGACTGGCACAAAGGAATTTGTGATGCCTTCAATTC 342 Query 309 TACTACAAGAGTGAACCCTAAACTCGATTTCGCACGGTCAATGAGAGAGATCGCTAAACG 368 ||||||||| ||||||||||||||||| ||| || | || |||||||||||||||||||| Sbjct 343 TACTACAAGGGTGAACCCTAAACTCGACTTCACAAGATCGATGAGAGAGATCGCTAAACG 402 Query 369 AAGCAGTCAGAATAGGATG-TC-C-GACTTTTCGTTAGGTTCCAAAATTGCTCGAACAAT 425 |||||||||||| |||||| | | ||||||||| |||| |||||||||||||||||||| Sbjct 403 AAGCAGTCAGAACAGGATGATGTCAGACTTTTCGATAGGATCCAAAATTGCTCGAACAAT 462 Query 426 CAGTTGTGACCCAAGGCTCGAGACTTGA--AAT--T-ATGTAGACCCAAGCTCTAGTTAT 480 ||||||||| |||||||||||||||||| ||| | ||||||||||||||| ||||||| Sbjct 463 CAGTTGTGATCCAAGGCTCGAGACTTGAGCAATAATGATGTAGACCCAAGCTGTAGTTAT 522 Query 481 TCTTA 485 | ||| Sbjct 523 TGTTA 527 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 23107707620 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5