BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg481450
Length=1652
Score E
Sequences producing significant alignments: (Bits) Value
AT2G25940.1 | Symbols: ALPHA-VPE, ALPHAVPE | alpha-vacuolar pro... 2390 0.0
AT4G32940.1 | Symbols: GAMMA-VPE, GAMMAVPE | gamma vacuolar pro... 1243 0.0
> AT2G25940.1 | Symbols: ALPHA-VPE, ALPHAVPE | alpha-vacuolar processing
enzyme | chr2:11063301-11066028 REVERSE LENGTH=1640
Length=1640
Score = 2390 bits (1294), Expect = 0.0
Identities = 1540/1656 (93%), Gaps = 27/1656 (2%)
Strand=Plus/Plus
Query 1 ACCTAACAATGACCACCGTCGCCGTCACGTTTCTCGCCCTCTTCCTCTATCTAGTCGCCG 60
||||||||||||||||||||| || | ||||||||||||||||||| |||||||||||
Sbjct 1 ACCTAACAATGACCACCGTCG-TTTC-C-TTTCTCGCCCTCTTCCTCTTTCTAGTCGCCG 57
Query 61 CTGTTTCTGGTGACGTCATCAAACTTCCTTCTCAAGCTTCCAAGTTCTTCCACCCAACTG 120
| ||||||||||||||||||||||||||||||| |||||| |||||||||| ||||||||
Sbjct 58 CCGTTTCTGGTGACGTCATCAAACTTCCTTCTCTAGCTTCTAAGTTCTTCCGCCCAACTG 117
Query 121 AAAACGACGATGATTCTACTAGGTGGGCTGTTCTCGTCGCCGGATCTAGCGGATACTGGA 180
||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||
Sbjct 118 AAAACGACGATGATTCTACTAAGTGGGCTGTTCTCGTCGCCGGATCCAGCGGATACTGGA 177
Query 181 ATTATCGACATCAGGCGGATGTTTGTCATGCTTATCAGCTTTTGAAGAAAGGTGGAGTGA 240
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 178 ATTATCGTCATCAGGCGGATGTTTGTCATGCTTATCAGCTTTTGAAGAAAGGTGGAGTGA 237
Query 241 AAGAGGAGAATATTGTAGTGTTCATGTATGATGACATTGCGAAGAACGAAGAGAATCCAA 300
|||||||||||||||| ||||| |||||||||||||||||||||||||| ||||||||||
Sbjct 238 AAGAGGAGAATATTGTGGTGTTTATGTATGATGACATTGCGAAGAACGAGGAGAATCCAA 297
Query 301 GACCTGGAGTTATTATCAATAGTCCTAATGGAGAGGATGTCTATAATGGAGTTCCCAAGG 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 298 GACCTGGAGTTATTATCAATAGTCCTAATGGAGAGGATGTCTATAATGGAGTTCCCAAGG 357
Query 361 ATTACACTGGAGATGATGTTAATGTTGATAACTTATTAGCTGTGATCCTTGGAAATAAAA 420
|||||||||||||||| ||||||||||||||||||||||||||||| |||||||| ||||
Sbjct 358 ATTACACTGGAGATGAAGTTAATGTTGATAACTTATTAGCTGTGATTCTTGGAAACAAAA 417
Query 421 CAGCTCTTAAAGGAGGAAGTGGGAAAGTTGTAGATAGCGGTCCAAACGATCATATCTTTA 480
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 418 CGGCTCTTAAAGGAGGAAGTGGGAAAGTTGTAGATAGCGGTCCAAACGATCATATCTTTA 477
Query 481 TATACTATAGTGATCACGGTGGCCCGGGAGTGCTCGGGATGCCAACTTCTCCGTACCTAT 540
|||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct 478 TATACTATAGTGATCACGGTGGTCCGGGAGTGCTCGGGATGCCAACTTCTCCAAACCTAT 537
Query 541 ATGCAAACGATCTCAATGATGTCCTGAAGAAAAAACATGCTTCAGGAACATATAAGAGCT 600
||||||| ||||||||||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct 538 ATGCAAATGATCTCAATGATGTCTTGAAGAAAAAATATGCTTCAGGAACATATAAGAGCT 597
Query 601 TGGTGTTTTATTTAGAGGCTTGTGAGTCTGGAAGTATTTTTGAAGGCCTTTTACCAGAGG 660
||||||||||||| ||||||||||| |||||||||||||||||||| |||||||||||||
Sbjct 598 TGGTGTTTTATTTGGAGGCTTGTGAATCTGGAAGTATTTTTGAAGGTCTTTTACCAGAGG 657
Query 661 GTTTAAACATTTACGCGACAACTGCATCGAATGCAGTAGAAAGTAGCTGGGGTACTTATT 720
||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||| |
Sbjct 658 GTTTAAATATTTACGCGACAACTGCATCGAATGCAGAAGAAAGTAGCTGGGGTACTTACT 717
Query 721 GTCCTGGAGAGGATCCTAGTCCTCCTTCCGAGTATGAGACCTGTTTGGGTGACTTATACA 780
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 718 GTCCTGGAGAGGATCCTAGTCCTCCTTCTGAGTATGAGACCTGTTTGGGTGACTTATACA 777
Query 781 GTGTTGCTTGGATGGAAGATAGTGATATACATAATTTACAGACAGAGACTTTGCACCAGC 840
||||||||||||| ||||||||||| | ||| |||||||| ||||||||||||||| |||
Sbjct 778 GTGTTGCTTGGATAGAAGATAGTGAAAAACACAATTTACAAACAGAGACTTTGCACGAGC 837
Query 841 AATATGAACTGGTGAAAAAGAGGACTGCAGGTTCTGGTAAGTCTTTTGGTTCTCATGTCA 900
|||||||| ||||||||||||| |||||||||||||||||||||| |||||||||||| |
Sbjct 838 AATATGAATTGGTGAAAAAGAGAACTGCAGGTTCTGGTAAGTCTTATGGTTCTCATGTTA 897
Query 901 TGGAATTTGGAGATATAGGACTCAGCAAGGAGAAGCTTGTTCTTTATATGGGTACAAACC 960
|||||||||||||||||||||||||||||||||||||||| |||| |||||||||||| |
Sbjct 898 TGGAATTTGGAGATATAGGACTCAGCAAGGAGAAGCTTGTCCTTTTTATGGGTACAAATC 957
Query 961 CAGCCA-ATGAAAACTTCACCTTTGTGAATGAAAATTCACTAAGGCCGCCTTCAAGAGTT 1019
|||| | ||||||||||||||||||||||||| |||||| ||||||||||||||||||||
Sbjct 958 CAGC-AGATGAAAACTTCACCTTTGTGAATGAGAATTCAATAAGGCCGCCTTCAAGAGTT 1016
Query 1020 ACAAATCAGCGTGACGCGGATCTTGTCCATTTCTGGGATAAGTATCGAAAGGCACCAGAA 1079
||||| |||||||| ||||||||||||||||||||| ||||||||| ||||||||| |||
Sbjct 1017 ACAAACCAGCGTGATGCGGATCTTGTCCATTTCTGGCATAAGTATCAAAAGGCACCGGAA 1076
Query 1080 GGTTCTGCAAGAAAAGTTGAAGCTCAGAAGCAAGTCCTTGAAGCAATGTCTCACAGACTT 1139
|| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1077 GGGTCAGCAAGAAAAGTTGAAGCTCAGAAGCAAGTCCTTGAAGCAATGTCTCACAGACTT 1136
Query 1140 CATGTCGATAATAGCATTCTATTAATTGGGAAACTCTTGTTTGGTTTGGACAG-TCCTGC 1198
||||| |||||||||||||| || ||||||| || |||||||||||||| || || |||
Sbjct 1137 CATGTTGATAATAGCATTCTGTTGATTGGGATTCTTTTGTTTGGTTTGGA-AGGTCATGC 1195
Query 1199 GGTACTAAATAATGTCCGGCCTTCTGGA-ACACCGCTTGTTGACGATTGGGACTGCCTTA 1257
||| ||||||| ||||||||||||||| | |||||||||||||||||||||||||||||
Sbjct 1196 GGTGTTAAATAAAGTCCGGCCTTCTGGAGA-ACCGCTTGTTGACGATTGGGACTGCCTTA 1254
Query 1258 AATCGCTGGTGAGAGTTTTCGAGATGCACTGTGGATCGTTGTCTCAGTACGGAATAAAGC 1317
|||| |||||||||| |||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1255 AATCTCTGGTGAGAGCTTTCGAGAGGCACTGTGGATCGTTGTCTCAGTACGGAATAAAGC 1314
Query 1318 ACATGAGGTCGATTGCAAACATATGCAACGCAGGAATTCAGATG-GGACAGATGGAGGAA 1376
|||||||||||||||||||||| ||||||||||| ||||||||| || || ||||||||
Sbjct 1315 ACATGAGGTCGATTGCAAACATGTGCAACGCAGGGATTCAGATGAGG-CAAATGGAGGAG 1373
Query 1377 GCAGCAATGCAGGCTTGTCCCACCATCCCTGCCAGTCCTTGGAGCTCTCTTGACCGCGGA 1436
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||
Sbjct 1374 GCAGCAATGCAGGCTTGTCCCACCATCCCTACCAGTCCTTGGAGCTCTCTTGACCGTGGA 1433
Query 1437 TTTAGTGCTTGATCCTCGTATCTGTCCAATATTTGTACCCCAAATCGATCTCCATTAATA 1496
|| ||||||||||| |||| || | || ||||| | | ||||| ||||||||||
Sbjct 1434 TTCAGTGCTTGATCTTCGTCTCCGCCCTATATT---A----A--TCGATGTCCATTAATA 1484
Query 1497 ACTTCTGTGTATTACAAATTATAATCTTTCCTATGTACACAAGATGTTGTAAATATGGTA 1556
| || | | ||| ||||||| || |||||||||| |||||||||||||||||||| |
Sbjct 1485 --T-CT-T--ACTACCAATTATACTCCTTCCTATGTAGACAAGATGTTGTAAATATGGGA 1538
Query 1557 TGCTTAAGTTCTTGATGTCACAAACAAAAGACACAGTGATTGTAAGTAGTTGTTTCAAAT 1616
|||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||
Sbjct 1539 TGCTTAAGTTCTTGATGTCACAGACAAAAGAAACAGTGATTGTAAGTAGTTGTTTCAAAT 1598
Query 1617 AATCTTTAACTGTTCCAGTGATTTCAAGGCTTTAAG 1652
||||||| ||||| ||||||||||||||||||||
Sbjct 1599 AATCTTTGT-TGTTCAAGTGATTTCAAGGCTTTAAG 1633
> AT4G32940.1 | Symbols: GAMMA-VPE, GAMMAVPE | gamma vacuolar processing
enzyme | chr4:15900270-15903268 REVERSE LENGTH=1879
Length=1879
Score = 1243 bits (673), Expect = 0.0
Identities = 1165/1402 (83%), Gaps = 36/1402 (3%)
Strand=Plus/Plus
Query 67 CTGGTGACGTCATCAAACTTCCTTCTCAAGCTTCCAAG-TTCTTCCACCCAACTGAAAAC 125
||| ||| || |||||||| ||||| || |||| | | ||||||| || ||||||||
Sbjct 199 CTGATGATGTTATCAAACTCCCTTCGCAGGCTT-CTCGCTTCTTCCGTCCTGCTGAAAAC 257
Query 126 GACGATGA---T---T-C--TACTAGGTGGGCTGTTCTCGTCGCCGGATCTAGCGGATAC 176
||||| || | | | |||||||||||||||||| ||||||||||||||||||||
Sbjct 258 GACGACGATTCTAACTCCGGTACTAGGTGGGCTGTTCTAGTCGCCGGATCTAGCGGATAT 317
Query 177 TGGAATTATC-GACATCAGGCGGATGTTTGTCATGCTTATCAGCTTTTGAAGAAAGGTGG 235
|||||||| | | |||||||| ||| | || ||||| ||||| ||| ||| |||||||||
Sbjct 318 TGGAATTA-CAGGCATCAGGCTGATATATGCCATGCCTATCAACTTCTGAGGAAAGGTGG 376
Query 236 AGTGAAAGAGGAGAATATTGTAGTGTTCATGTATGATGACATTGCGAAGAACGAAGAGAA 295
| ||||||||||||||||||| || |||||||||||||| ||||| || || | |||||
Sbjct 377 ATTGAAAGAGGAGAATATTGTGGTATTCATGTATGATGATATTGCTAACAATTACGAGAA 436
Query 296 TCCAAGACCTGGAGTTATTATCAATAGTCCTAATGGAGAGGATGTCTAT-AATGGAGTTC 354
|||||| |||||| |||||||| || ||| ||||| | ||||||||| || |||||||
Sbjct 437 TCCAAGGCCTGGAACCATTATCAACAGCCCTCATGGAAAAGATGTCTATCAA-GGAGTTC 495
Query 355 CCAAGGATTACACTGGAGATGATGTTAATGTTGATAACT-TATTAGCTGTGATCCTTGGA 413
|||||||||| |||||||||||||| ||||||||||| | |||| |||||||||||||||
Sbjct 496 CCAAGGATTATACTGGAGATGATGTCAATGTTGATAA-TCTATTTGCTGTGATCCTTGGA 554
Query 414 AATAAAACAGCTCTTAAAGGAGGAAGTGGGAAAGTTGTAGATAGCGGTCCAAACGATCAT 473
| ||||| ||| ||||||| ||||||||||| ||||| ||||| ||||| || ||||||
Sbjct 555 GACAAAACTGCTGTTAAAGGGGGAAGTGGGAAGGTTGTGGATAGTGGTCCTAATGATCAT 614
Query 474 ATCTTTATATACTATAGTGATCACGGTGGCCCGGGAGTGCTCGGGATGCCAACTTCTCCG 533
||||| |||| ||| ||||| || ||||| || ||||| || |||||||||||||||||
Sbjct 615 ATCTTCATATTCTACAGTGACCATGGTGGTCCTGGAGTTCTTGGGATGCCAACTTCTCCT 674
Query 534 TACCTATATGCAAACGATCTCAATGATGTCCTGAAGAAAAAACATGCTTCAGGAACATAT 593
|||||||||||||| ||||||||||||||| ||||||| |||||||||| ||||||||||
Sbjct 675 TACCTATATGCAAATGATCTCAATGATGTCTTGAAGAAGAAACATGCTTTAGGAACATAT 734
Query 594 AAGAGCTTGGTGTTTTATTTAGAGGCTTGTGAGTCTGGAAGTATTTTTGAAGGCCTT-TT 652
|| ||||||||||||||| | || ||||| || ||||||||||| |||||||| ||| ||
Sbjct 735 AAAAGCTTGGTGTTTTATCTCGAAGCTTGCGAATCTGGAAGTATCTTTGAAGGGCTTCTT 794
Query 653 ACCAGAGGGTTTAAACATTTACGCGACAACTGCATCGAATGCAGTAGAAAGTAGCTGGGG 712
|| |||||||| ||||| || || ||||||||||| || || | |||||| || |||||
Sbjct 795 -CCTGAGGGTTTGAACATCTATGCCACAACTGCATCAAACGCCGAAGAAAGCAGTTGGGG 853
Query 713 TACTTATTGTCCTGGAGAGGATCCTAGTCCTCCTTCC-GAGTATGAGACCTGTTTGGGTG 771
||| ||||| ||||||||||| || |||||||| || |||||||| || ||||| ||||
Sbjct 854 TACCTATTGCCCTGGAGAGGAACCCAGTCCTCC-ACCGGAGTATGAAACTTGTTTAGGTG 912
Query 772 ACTTATACAGTGTTGCTTGGATGGAAGATAGTGATATACATAATTTACAGACAGAGACTT 831
|||| |||||||||||||||||||||||||||| ||| || ||||||||||| ||||||
Sbjct 913 ACTTGTACAGTGTTGCTTGGATGGAAGATAGTGGTATGCACAATTTACAGACTGAGACTC 972
Query 832 TGCACCAGCAATATGAACTGGTGAAAAAGAGGACTGCAGGT-TCTGG-TAAGTCTTTTGG 889
||||||||||||||||||| ||||||| |||||||||| | | ||| || |||| |||
Sbjct 973 TGCACCAGCAATATGAACTTGTGAAAAGGAGGACTGCACCTGT-TGGGTAC-TCTTATGG 1030
Query 890 TTCTCATGTCATGGAATTTGGAGATATAGGACTCAGCAAGGAGAAGCTTGTTCTTTATAT 949
||||||||||||| ||| ||| ||| ||||| | |||||||| || || | |||||||||
Sbjct 1031 TTCTCATGTCATGCAATATGGCGATGTAGGAATTAGCAAGGATAATCTCGATCTTTATAT 1090
Query 950 GGGTACAAACCCAGCCAATGAAAACTTCACCTTTGTGAATGAAAATTCACTAAGGCCGCC 1009
||| |||||||| |||||||| || || ||||||| | ||| |||||||||| ||| ||
Sbjct 1091 GGGAACAAACCCTGCCAATGACAATTTTACCTTTGCGGATGCGAATTCACTAAAGCCACC 1150
Query 1010 TTCAAGAGTTACAAATCAGCGTGACGCGGATCTTGTCCATTTCTGGGATAAGTATCGAAA 1069
||||||||||||||| |||||||| || |||||||| ||||| ||||| ||||| |||||
Sbjct 1151 TTCAAGAGTTACAAACCAGCGTGATGCAGATCTTGTTCATTTTTGGGAAAAGTACCGAAA 1210
Query 1070 GGCACCAGAAGGTTCTGCAAGAAAAGTTGAAGCTCAGAAGCAAGTCCTTGAAGCAATGTC 1129
|||||||||||||| ||||||||| ||||||||||||||||| |||||||| |||||
Sbjct 1211 AGCACCAGAAGGTTCAGCAAGAAAAACAGAAGCTCAGAAGCAAGTACTTGAAGCCATGTC 1270
Query 1130 TCACAGACTTCATGTCGATAATAGCATTCTATTAATTGGGAAACTCTTGTTTGG--TTTG 1187
||||||||||||| | || |||||| | || | | || ||| |||||||||| |||
Sbjct 1271 TCACAGACTTCATATTGACAATAGCGTGATACTCGTCGGAAAAATCTTGTTTGGCATTTC 1330
Query 1188 GACAG-TCCTGCGGTACTAAATAATGTCCGGCCTTCTGGAACA-CCGCTTGTTGACGATT 1245
|| || ||||| || ||||| || || ||| || |||| || || || || || || |
Sbjct 1331 GAGAGGTCCTGAAGTGCTAAACAAAGTACGGTCTGCTGGG-CAACCTCTAGTCGATGACT 1389
Query 1246 GGGACTGCCTTAAATCGCTGGTGAGAGTTTTCGAGATGCACTGTGGATCGTTGTCTCAGT 1305
|| ||||||||||| | |||||||| |||||||| ||||||||||||| |||||||||
Sbjct 1390 GGAACTGCCTTAAAAATCAGGTGAGAGCTTTCGAGAGGCACTGTGGATCGCTGTCTCAGT 1449
Query 1306 ACGGAATAAAGCACATGAGGTCGATTGCAAACATATGCAACGCAGGAATTCAGATGG-GA 1364
|||| || |||||||||||||| |||||||||| ||||| ||||| ||||| |||| |
Sbjct 1450 ACGGTATCAAGCACATGAGGTCTTTTGCAAACATCTGCAATGCAGGGATTCAAATGGAG- 1508
Query 1365 CAGATGGAGGAAGCAGCAATG-CAGGCTTGTCCCAC-CATCCCTGCCAGTCCTTGGAGCT 1422
|| |||||||| ||||| | ||||||||| |||| | | || | ||||||||||||
Sbjct 1509 CAAATGGAGGAGGCAGCT-TCACAGGCTTGTACCACAC-TGCCAACTGGTCCTTGGAGCT 1566
Query 1423 CTCTTGACCGCGGATTTAGTGC 1444
| ||| |||| ||||| |||||
Sbjct 1567 CGCTTAACCGTGGATTCAGTGC 1588
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 81626086170
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5