BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg481476
Length=1780
Score E
Sequences producing significant alignments: (Bits) Value
AT2G26200.1 | Symbols: | S-adenosyl-L-methionine-dependent met... 2789 0.0
> AT2G26200.1 | Symbols: | S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein | chr2:11152726-11156466
FORWARD LENGTH=1896
Length=1896
Score = 2789 bits (1510), Expect = 0.0
Identities = 1697/1788 (95%), Gaps = 10/1788 (1%)
Strand=Plus/Plus
Query 1 GAAGAAGAACCAGAGCGTTTACCGTCGACGAACCACAGATACGGCGTGTGG---T-AATA 56
||||||||||||||||||||| |||||||||| |||||||||||||||||| | ||||
Sbjct 4 GAAGAAGAACCAGAGCGTTTAACGTCGACGAA-CACAGATACGGCGTGTGGTAATAAATA 62
Query 57 ATGTCTTCTGGCTTGAAAATCATAGAAGAACAGCAGAAACCGATTCAGAAGTTGCAGATT 116
||||||||||||||||||||||||||||||| ||| ||||||||| ||||| ||||||||
Sbjct 63 ATGTCTTCTGGCTTGAAAATCATAGAAGAACCGCAAAAACCGATTGAGAAGCTGCAGATT 122
Query 117 TATCCGACGGCTAATGCCGGTGTTTCTCCTTTTTGGCGAGAGAAGTATGAAAGGGATGCT 176
||||||||||||||||| ||||||||||| ||||||||||| |||||||| | ||||||
Sbjct 123 TATCCGACGGCTAATGCTGGTGTTTCTCCCTTTTGGCGAGACAAGTATGAGCGAGATGCT 182
Query 177 AAAAAGTATTGGGATATATTTTACAAGCATCATGGAGACAGATTTTTCAAAGACCGCCAC 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 183 AAAAAGTATTGGGATATATTTTACAAGCATCATGGAGACAGATTTTTCAAAGACCGCCAC 242
Query 237 TACTTGGACAAGGAATGGAATAGCTATTTTTCCGGTAGTGGGAAAAAAGTCATTCTTGAG 296
|||||||| ||||||||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct 243 TACTTGGATAAGGAATGGAATAGCTATTTTTCCGTTAGTGGGAAAAGTGTCATTCTTGAG 302
Query 297 GTTGGTTGTGGAGCTGGAAACACCATCTTTCCGTTGATTGCCACATATCCAGACATTTTT 356
||||| |||||||||||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct 303 GTTGGCTGTGGAGCTGGAAACACCATCTTTCCATTGATCGCCACATATCCAGACATTTTT 362
Query 357 GTTTATGCATGTGATTTTTCACCACGAGCCGTCGAATTGGTCAAGGCTCATGATGAATAC 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 363 GTTTATGCATGTGATTTTTCACCACGAGCCGTCGAATTGGTCAAGGCTCATGATGAATAC 422
Query 417 ACAGAGACGCGTGTGTGTGCATTTGCTTGTGACTTGACAGGGGATGGTCTTGACAAGCAT 476
|||||||| || || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 423 ACAGAGACACGCGTTTGTGCATTTGCTTGTGACTTGACAGGGGATGGTCTTGACAAGCAT 482
Query 477 ATTTCTCCATCTTCAGTTGATATTGTGACCATGATATTCGTTTTATCTGCGGTATCCCCA 536
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 483 ATTTCTCCATCTTCAGTTGATATTGTGACCATGATATTTGTTTTATCTGCGGTATCCCCA 542
Query 537 GAGAAGATGGCCTCAGTATTGCAGAACATTAAGAAAGTGCTTAAGCCAAATGGGTGTATA 596
||||||||| ||||||||||||||||||||| |||||| ||||||||||||||||||||
Sbjct 543 GAGAAGATGTCCTCAGTATTGCAGAACATTAGGAAAGTTCTTAAGCCAAATGGGTGTATC 602
Query 597 CTCTTCCGTGACTATGCTGTCGGTGATCTTGCTCAGGAGAGGTTTTCTGGGAAGGATCAG 656
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 603 CTCTTCCGTGACTATGCTGTCGGTGATCTTGCTCAGGAGAGGTTCTCTGGGAAGGATCAG 662
Query 657 AAGATCAGCAAGAACTTTTATGTGAGAGGTGATGGCACTCGTGCATTCTACTTTTCTAAT 716
| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 663 AGGATCAGCGAGAACTTTTATGTGAGAGGTGATGGCACTCGTGCATTCTACTTTTCTAAT 722
Query 717 GAATTCCTAGAAACTCTGTTTTCCGAACAAGGATTTGAAGTTGAGGAGCTTGATGTTTGC 776
||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 723 GAATTCCTAGAAACTTTGTTTTCTGAACAAGGATTTGAAGTTGAGGAGCTTGATGTTTGC 782
Query 777 TGCAAACAAGTTGAGAATCGTTCACGCGAACTGGTCATGAATCGGCGCTGGGTCCAAGCT 836
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 783 TGCAAACAAGTTGAGAATCGTTCACGCGAACTGGTCATGAATCGGCGCTGGGTCCAAGCT 842
Query 837 ACATTTTGTCGATCGCATGGCAACCAAAACCCTGGCGATAGTTT-ATCTCCTGCCAAATT 895
|||||| ||||| | |||||||| |||||||| | |||||||| | |||||||||||||
Sbjct 843 ACATTTCGTCGAACAAATGGCAACAAAAACCCTTGTGATAGTTTGA-CTCCTGCCAAATT 901
Query 896 AGACAAATCTGAACAACATGATAGCATTCAGTCTAAATCTGAGGAGCAGGAAAGAAAAGA 955
||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 902 AGATAAATCTGAACAACAGGATAGCATTCAGTCTAAATCTGAGGAGCAGGAAAGAAAAGA 961
Query 956 GATTATCGATAACACTGACATTGACATATCTGATGGTCTGGCTATGGAAATGTTTGGAGC 1015
|||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 962 GATTATTGATTACACTGACATTGACATATCTGATGGTCTGGCTATGGAAATGTTTGGAGC 1021
Query 1016 CTCCCCATCAAGTCATGAGATGACCGTGGTTAAGCTTAGGGATTCTGATTTTAAAATCAA 1075
||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct 1022 CTCCCCATCAAGTCATGAGATGAGCGTGGTTAAGCTTAGGGATTCTGCTTTTAAAATCAA 1081
Query 1076 ACTTTTGTCCAAAGAATATCAACATACTTGCAAATCAACGGGGTTGATGCTCTGGGAGTC 1135
||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1082 ACTTTTGTCAAAAGAATATCAACATACTTGCAAATCTACGGGGTTGATGCTCTGGGAGTC 1141
Query 1136 TGCTCGGCTTATGGCTTCTGTTCTTGACAGGAACCCAAATATTGTGTCTGGAAAACGGGT 1195
||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||
Sbjct 1142 TGCTCGGCTTATGGCTTCTGTTCTTGACAGGAACCCAAACATTGTTTCTGGAAAACGGGT 1201
Query 1196 GTTGGAATTGGGTTGTGGCTGTACAGGGATTTGCTCGATGGTAGCTGCCAGATCAGCTAA 1255
||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct 1202 GTTGGAATTGGGTTGTGGCTGCACAGGAATTTGCTCGATGGTAGCTGCCAGATCAGCTAA 1261
Query 1256 CCTGGTGGTAGCTACCGATGCAGACACGAAGGCACTTACACTACTGACAGAGAACATCAC 1315
||| |||||||| |||||||||||||| ||||||||||| ||| ||||||||||||||||
Sbjct 1262 CCTTGTGGTAGCAACCGATGCAGACACAAAGGCACTTACGCTATTGACAGAGAACATCAC 1321
Query 1316 AATGAACCTCCAATCTTCTTTACTTGGAAAACTGAAAACAGGTGTACTTGAATGGGGTAA 1375
|||||||||||||||||||||||||||||||||||||||| | |||||||||||||| ||
Sbjct 1322 AATGAACCTCCAATCTTCTTTACTTGGAAAACTGAAAACAAGCGTACTTGAATGGGGAAA 1381
Query 1376 CAAAGAACATACAGAAAGCATTAAGGGTTTGGCTTGTGAGGGATTTGAAGTTATCATTGG 1435
|||||| |||| ||||||||||||| ||||||||||||||||||| ||||||||||| ||
Sbjct 1382 CAAAGAGCATATAGAAAGCATTAAGCGTTTGGCTTGTGAGGGATTCGAAGTTATCATGGG 1441
Query 1436 GACAGATGTTACCTATGTAGCTGAAGCCATTATTCCTTTGTTTGAAACCGCAAAAGAATT 1495
||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| ||
Sbjct 1442 GACAGATGTTACCTATGTAGCTGAAGCCATTATACCTTTATTTGAAACCGCAAAAGAGTT 1501
Query 1496 GATTTTACGGAAAATGGGAGAC--CT-AGAGATGCAAGAAAAGCCGGCATTGATTCTATG 1552
||| |||||||||||||||||| || |||| ||||||| |||||||| |||||||||||
Sbjct 1502 GATCTTACGGAAAATGGGAGACGACTTAGAGGTGCAAGAGAAGCCGGCGTTGATTCTATG 1561
Query 1553 CCATGTTTTCAGAAGGGTTGATGAACCTTCTCTCCTGTCAGCTGCATCTAAGTATGGGTT 1612
||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||
Sbjct 1562 CCATGTTTTCAGAAGGGTTGATGAACCTTCTCTTCTGTCAGCTGCATCTAAGTTTGGGTT 1621
Query 1613 TAAGCTTGCAGACAGATGGGCTGCAAATTCAAAGGAATCTCCTATCGGGAACATCATTGA 1672
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1622 TAAGCTTGCAGACAGATGGGCTGCAAATTCAAAGGAATCTCCTATTGGGAACATCATTGA 1681
Query 1673 CAGATGGTTTTCCGAAAAGGATTTGGTCGCGGAAATCCCGAGTTCTGCGTTGCATATTCT 1732
||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1682 CAGTTGGTTTTCCGAAAAGGATTTGGTCGCAGAAATCCCGAGTTCTGCGTTGCATATTCT 1741
Query 1733 TTACTTTCAGATGGAGTAACTATGGGGTGGAGGATCAAGTGTTGATTA 1780
|| |||||||||||||||||||| ||| ||||| ||| |||||||||
Sbjct 1742 CTATTTTCAGATGGAGTAACTATGTGGTAGAGGAGCAAATGTTGATTA 1789
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 88051755930
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5