BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg481495
Length=726
Score E
Sequences producing significant alignments: (Bits) Value
AT2G26400.1 | Symbols: ARD, ATARD3, ARD3 | acireductone dioxyge... 1027 0.0
AT4G14710.5 | Symbols: ATARD2 | RmlC-like cupins superfamily pr... 732 0.0
AT4G14716.1 | Symbols: ATARD1, ARD1 | acireductone dioxygenase ... 669 0.0
> AT2G26400.1 | Symbols: ARD, ATARD3, ARD3 | acireductone dioxygenase
3 | chr2:11231800-11233295 REVERSE LENGTH=879
Length=879
Score = 1027 bits (556), Expect = 0.0
Identities = 674/731 (92%), Gaps = 8/731 (1%)
Strand=Plus/Plus
Query 1 AGAGGAATAACCATGGTTGAAGCCG-TGAGGGATCAAAGAGAAGAAGCGATTCAAGCTTG 59
||| |||||||||||| |||||||| | | |||||||| ||||||| ||||||||||||
Sbjct 10 AGAAGAATAACCATGGGTGAAGCCGCT-AAGGATCAAACTGAAGAAGTGATTCAAGCTTG 68
Query 60 GTATTTGGATGACAATGAAGAGGATCAGAAACTTCCTCACCACAAGGATCCTAAGGAGTT 119
||| |||||| | || ||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 69 GTACTTGGATAATAAGGAAGAGGATCAGAAACTTCCTCACCACAAGGATCCTAAGGAATT 128
Query 120 TGTATCTTTGGACAAACTTGCAGAGCTTGGAGTACTTAGCTGGAGACTTGACGCTGATAA 179
||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||
Sbjct 129 TGTATCTTTGGACAAACTTGCAGAGCTTGGAGTACTTTGCTGGAGACTTGATGCTGATAA 188
Query 180 CTATGAAACCGATGAGGAGTTGAAAAAGATCCGCGAATCTCGTGGTTACTCCTACATGGA 239
|||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||
Sbjct 189 CTATGAAACCGATGAGGAATTGAAAAGGATCCGCGAATCTCGTGGTTACTCCTACATGGA 248
Query 240 CATT-TGTGAGGTGTGTCCAAAAAAGCTTCCAAACTATGAAGCAACAGTAAAGATGTTTT 298
| || ||||||||||||||| | ||||||||||||||||||| || ||||||||||||||
Sbjct 249 C-TTATGTGAGGTGTGTCCAGAGAAGCTTCCAAACTATGAAGAAAAAGTAAAGATGTTTT 307
Query 299 TTGTAGAACATTTACACATTGATGAAGAGATTCGTTACTGCCTCGCAGGAAGTGGATACT 358
||| |||||||||||| |||||||||||||| ||||||||||||||||||||||||||||
Sbjct 308 TTGAAGAACATTTACATATTGATGAAGAGATCCGTTACTGCCTCGCAGGAAGTGGATACT 367
Query 359 TTGATGTGAGGGATCTCAATGATGTTTGGATTAGAGTATGGGTAAAGAAGGGAGGTATGA 418
||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct 368 TTGATGTGAGGGATCTCAATGATATTTGGATTAGAGTATGGGTAAAGAAGGGAGGTTTGA 427
Query 419 TAGTCTTCCCTGCTGGAATATATCATCGCTTCACCGTGGACTCAGACAATTATATGAAGG 478
||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||
Sbjct 428 TAGTCTTCCCTGCTGGAATATATCATCGCTTCACCGTGGACTCGGACAACTATATGAAGG 487
Query 479 CAATGCGGCTTTTCGTGGGTGGACCAGTGTGGACTGCTTACAATCGCCCACACGACCATC 538
||||||| |||||||||||||||||||||||||||||||| ||||||||||| |||||||
Sbjct 488 CAATGCGTCTTTTCGTGGGTGGACCAGTGTGGACTGCTTATAATCGCCCACATGACCATC 547
Query 539 TTCCTGCAAGGATAGCGTATATGGATAAATTCGTGAAGGTGATTAGGGACCGTACCATAG 598
|||||||||||| |||||||||| | |||||| ||||||||||| ||||||||| |||||
Sbjct 548 TTCCTGCAAGGAAAGCGTATATGAAAAAATTCTTGAAGGTGATTGGGGACCGTAACATAG 607
Query 599 ACGCTTCAGCGTAGAGGGACTCTCAGGCATCAGATTTCTATAAGCTAAACATATGTTTAG 658
||||||||||||| || |||||| || ||||||||||||||||||||||||||||||||
Sbjct 608 ACGCTTCAGCGTAAAGA-ACTCTCGGGGATCAGATTTCTATAAGCTAAACATATGTTTAG 666
Query 659 ATGATGT-TGTCTTTATGCTTTATTGTGTTTACCAC-TA-AAACCGAAGACACTTCGGTT 715
||| ||| | | |||||||||||| ||||||| || | |||||||||||| || ||||
Sbjct 667 ATGTTGTCTTTAATTATGCTTTATTATGTTTACAACATGGAAACCGAAGACATTTTGGTT 726
Query 716 CGTGTGTCTTT 726
| |||||||||
Sbjct 727 CATGTGTCTTT 737
> AT4G14710.5 | Symbols: ATARD2 | RmlC-like cupins superfamily
protein | chr4:8424703-8426471 REVERSE LENGTH=1030
Length=1030
Score = 732 bits (396), Expect = 0.0
Identities = 551/625 (88%), Gaps = 13/625 (2%)
Strand=Plus/Plus
Query 36 AAGAGAAGAAGCGATTCAAGCTTGGTATTTGGATGACAATGAAGAGGATCAGAAACTTCC 95
||||||||||| ||| || || |||||| ||||||| | ||||||||||||| ||||||
Sbjct 260 AAGAGAAGAAGTGATCCAGGCATGGTATATGGATGATAGCGAAGAGGATCAGAGACTTCC 319
Query 96 TCACCACAAGGATCCTAAGGAGTTTGTATCTTTGGACAAACTTGCAGAGCTTGGAGTACT 155
||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||
Sbjct 320 TCACCACAAGGATCCTAAGGAGTTTCTATCTTTGGACAAACTTGCAGAGCTGGGAGTACT 379
Query 156 TAGCTGGAGACTTGACGCTGATAACTATGAAACCGATGAGGAGTTGAAAAAGATCCGCGA 215
||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||
Sbjct 380 TAGCTGGAGACTTGATGCTGATAACTATGAAACCGATGAGGATTTGAAAAAGATCCGCGA 439
Query 216 ATCTCGTGGTTACTCCTACATGGACATTTGTGAGGTGTGTCCAAAAAAGCTTCCAAACTA 275
||||||||||||||| ||||||||| |||||||||| || || ||||||||||||||||
Sbjct 440 ATCTCGTGGTTACTCTTACATGGACTTTTGTGAGGTATGCCCGGAAAAGCTTCCAAACTA 499
Query 276 TGAAG-CAACAGTAAAGATG-TTTTTTGTAGAACATTTACACATTGATGAAGAGATTCGT 333
||||| || ||| |||| | ||||| | ||||||||| |||| |||||||||||| |||
Sbjct 500 TGAAGTGAA-AGTGAAGA-GCTTTTTCGAAGAACATTTGCACACTGATGAAGAGATCCGT 557
Query 334 TACTGCCTCGCAGGAAGTGGATACTTTGATGTGAGGGATCTCAATGATGTTTGGATTAGA 393
|||||| | |||||||| || ||||||||||||||||||| |||||| | ||||||||||
Sbjct 558 TACTGCGTTGCAGGAAGCGGTTACTTTGATGTGAGGGATCGCAATGAAGCTTGGATTAGA 617
Query 394 GTATGGGTAAAGAAGGGAGGTATGATAGTCTTCCCTGCTGGAATATATCATCGCTTCACC 453
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 618 GTATGGGTAAAGAAGGGAGGTATGATAGTCTTACCTGCTGGAATATATCATCGCTTCACC 677
Query 454 GTGGACTCAGACAATTATATGAAGGCAATGCGGCTTTTCGTGGGTGGACCAGTGTGGACT 513
|| ||||||||||| ||||| ||||||||||||||||||||||||| ||| || |||||
Sbjct 678 GTAGACTCAGACAACTATATCAAGGCAATGCGGCTTTTCGTGGGTGAACCGGTCTGGACA 737
Query 514 GCTTACAATCGCCCACACGACCATCTTCCTGCAAGGATAGCGTATATGGATAAATTCGTG 573
| |||||||||||||||||||| || |||||||||| || ||| || ||||| ||||||
Sbjct 738 CCATACAATCGCCCACACGACCACCTCCCTGCAAGGAAAGAGTACATCGATAATTTCGTG 797
Query 574 AAGGTGATT-AGGGACCGTACCATAGACGCTTCAGCGTAGAGGGACTCTCAG------GC 626
||||||| | | || || ||||||||| ||||| |||||| | |||||| ||
Sbjct 798 AAGGTGAATGAAGGTG-GTGTCATAGACGCGTCAGCCTAGAGG-ATTCTCAGTCTTATGC 855
Query 627 ATCAGATTTCTATAAGCTAAACATA 651
||||||||||||||| |||| ||||
Sbjct 856 ATCAGATTTCTATAAACTAAGCATA 880
> AT4G14716.1 | Symbols: ATARD1, ARD1 | acireductone dioxygenase
1 | chr4:8430207-8431945 REVERSE LENGTH=934
Length=934
Score = 669 bits (362), Expect = 0.0
Identities = 506/576 (88%), Gaps = 7/576 (1%)
Strand=Plus/Plus
Query 2 GAGGAATAACCATGGTTGAAGCCGTGAGGGATCAAAGAGAAGAAGCGATTCAAGCTTGGT 61
|||||| || |||| |||||| || | |||| |||||||||| ||||||||||||||
Sbjct 69 GAGGAA-CACGATGGGTGAAGCGGTCAAGGATGGGAGAGAAGAAGTGATTCAAGCTTGGT 127
Query 62 ATTTGGATGACAATGAAGAGGATCAGAAACTTCCTCACCACAAGGATCCTAAGGAGTTTG 121
|| ||||||| | |||||||||||||| |||||||||||||||||||||||| |||||||
Sbjct 128 ATATGGATGATAGTGAAGAGGATCAGAGACTTCCTCACCACAAGGATCCTAAAGAGTTTG 187
Query 122 TATCTTTGGACAAACTTGCAGAGCTTGGAGTACTTAGCTGGAGACTTGACGCTGATAACT 181
|||| |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||
Sbjct 188 TATCGTTGGACAAACTTGCAGAGCTGGGAGTACTTAGCTGGAGACTTGATGCTGATAACT 247
Query 182 ATGAAACCGATGAGGAGTTGAAAAAGATCCGCGAATCTCGTGGTTACTCCTACATGGACA 241
|||||||||||||||| |||||||||||||| ||||||||||||||||| |||||||||
Sbjct 248 ATGAAACCGATGAGGATTTGAAAAAGATCCGTGAATCTCGTGGTTACTCTTACATGGACT 307
Query 242 TTTGTGAGGTGTGTCCAAAAAAGCTTCCAAACTATGAAG-CAACAGTAAAGATG-TTTTT 299
|||||||||| || || ||||||||||||||||||||| || ||| |||| | |||||
Sbjct 308 TTTGTGAGGTATGCCCGGAAAAGCTTCCAAACTATGAAGTGAA-AGTGAAGA-GCTTTTT 365
Query 300 TGTAGAACATTTACACATTGATGAAGAGATTCGTTACTGCCTCGCAGGAAGTGGATACTT 359
| |||||||||||||| |||||| ||||| ||||||||| | ||||||| ||| |||||
Sbjct 366 CGAAGAACATTTACACACTGATGAGGAGATCCGTTACTGCGTTGCAGGAACTGGTTACTT 425
Query 360 TGATGTGAGGGATC-TCAATGATGTTTGGATTAGAGTATGGGTAAAGAAGGGAGGTATGA 418
||||||||| |||| | ||||| | ||||||||| |||| ||||||||||||||||||||
Sbjct 426 TGATGTGAGAGATCGT-AATGAAGCTTGGATTAGGGTATTGGTAAAGAAGGGAGGTATGA 484
Query 419 TAGTCTTCCCTGCTGGAATATATCATCGCTTCACCGTGGACTCAGACAATTATATGAAGG 478
||||||| |||||||| || |||||||||||||| |||||||| ||||| ||||| ||||
Sbjct 485 TAGTCTTACCTGCTGGGATCTATCATCGCTTCACTGTGGACTCTGACAACTATATCAAGG 544
Query 479 CAATGCGGCTTTTCGTGGGTGGACCAGTGTGGACTGCTTACAATCGCCCACACGACCATC 538
|||||||||| |||||||||| ||| || ||||| | ||||||||||||||||||||||
Sbjct 545 CAATGCGGCTATTCGTGGGTGAACCGGTATGGACACCATACAATCGCCCACACGACCATC 604
Query 539 TTCCTGCAAGGATAGCGTATATGGATAAATTCGTGA 574
|||||||||||| || ||| | ||||| ||| |||
Sbjct 605 TTCCTGCAAGGAAAGAATATGTCGATAACTTCATGA 640
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 35214137047
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5