BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg481537
Length=459
Score E
Sequences producing significant alignments: (Bits) Value
AT4G05300.1 | Symbols: | transposable element gene | chr4:2705... 259 2e-68
AT2G01040.1 | Symbols: | transposable element gene | chr2:6543... 169 3e-41
AT2G06860.1 | Symbols: | transposable element gene | chr2:2766... 167 9e-41
AT4G04655.1 | Symbols: | transposable element gene | chr4:2357... 163 1e-39
AT2G01029.1 | Symbols: | transposable element gene | chr2:2846... 163 1e-39
AT5G32481.1 | Symbols: | transposable element gene | chr5:1210... 158 6e-38
AT5G32540.1 | Symbols: | transposable element gene | chr5:1219... 158 6e-38
AT3G47240.1 | Symbols: | transposable element gene | chr3:1739... 158 6e-38
AT2G12540.1 | Symbols: | transposable element gene | chr2:5108... 158 6e-38
AT1G54926.1 | Symbols: | transposable element gene | chr1:2047... 158 6e-38
AT4G00140.1 | Symbols: EDA34 | Calcium-binding EF-hand family p... 154 7e-37
AT5G28110.1 | Symbols: | transposable element gene | chr5:1010... 152 3e-36
AT5G28120.1 | Symbols: | transposable element gene | chr5:1011... 152 3e-36
AT3G33189.1 | Symbols: | transposable element gene | chr3:1402... 152 3e-36
AT5G29060.2 | Symbols: | transposable element gene | chr5:1112... 148 3e-35
AT2G21460.1 | Symbols: | transposable element gene | chr2:9188... 148 3e-35
AT1G41797.1 | Symbols: | transposable element gene | chr1:1556... 148 3e-35
AT5G31873.1 | Symbols: | transposable element gene | chr5:1174... 147 1e-34
AT3G30816.1 | Symbols: | transposable element gene | chr3:1251... 147 1e-34
AT4G06495.1 | Symbols: | transposable element gene | chr4:3133... 143 2e-33
AT4G06496.1 | Symbols: | transposable element gene | chr4:3136... 143 2e-33
AT4G08095.1 | Symbols: | transposable element gene | chr4:4998... 137 7e-32
AT2G12530.1 | Symbols: | transposable element gene | chr2:5106... 128 4e-29
AT4G08111.1 | Symbols: | transposable element gene | chr4:5055... 117 1e-25
AT2G12385.1 | Symbols: | transposable element gene | chr2:4991... 113 1e-24
AT4G08750.1 | Symbols: | transposable element gene | chr4:5580... 106 2e-22
AT3G45095.1 | Symbols: | transposable element gene | chr3:1649... 106 2e-22
AT2G12505.1 | Symbols: | transposable element gene | chr2:5096... 100 1e-20
AT3G31945.1 | Symbols: | transposable element gene | chr3:1294... 99.0 3e-20
AT4G08760.1 | Symbols: | BEST Arabidopsis thaliana protein mat... 97.1 1e-19
AT4G08109.1 | Symbols: | transposable element gene | chr4:5049... 67.6 1e-10
AT1G54923.1 | Symbols: | transposable element gene | chr1:2047... 58.4 6e-08
> AT4G05300.1 | Symbols: | transposable element gene | chr4:2705670-2708158
FORWARD LENGTH=1164
Length=1164
Score = 259 bits (140), Expect = 2e-68
Identities = 203/233 (87%), Gaps = 6/233 (3%)
Strand=Plus/Plus
Query 226 GTTCGATGGAATCACGAGGATAAGTGCAACCAAACACACCCAAGGGTCGCCCATGGATGC 285
|||||| |||| ||| |||||||||||| || | ||||||||||||||||||||||||||
Sbjct 910 GTTCGA-GGAAGCACAAGGATAAGTGCATCCGAGCACACCCAAGGGTCGCCCATGGATGC 968
Query 286 AATCTCACCGGTAAAGGGAGTAAGCACCGAGAATGGGTA-AGTGACGTGGTTCACCATGA 344
||||| |||||||||||||| ||||||| ||||||| | |||| | ||| | |
Sbjct 969 AATCTTACCGGTAAAGGGAGAAAGCACCAAGAATGGCCATGGTGAAACCGATCA-GA-G- 1025
Query 345 ATCGGTAACACC-AATGGTGACTCGACGGATAACCAACGGGAAAGTCCACGGTGAGAACC 403
|||||||| ||| || ||||||||||||||||||||||||||||||| |||||| |||||
Sbjct 1026 ATCGGTAAGACCAAAGGGTGACTCGACGGATAACCAACGGGAAAGTCTACGGTGGGAACC 1085
Query 404 GGTGGACAAAACGGATGTTGGACCCGCGAGCAAACCAAAGGCCGACGGACGAA 456
| |||||||||||||||||||||||||||||||||| |||||||||||| |||
Sbjct 1086 GATGGACAAAACGGATGTTGGACCCGCGAGCAAACCTAAGGCCGACGGAAGAA 1138
Score = 71.3 bits (38), Expect = 8e-12
Identities = 38/38 (100%), Gaps = 0/38 (0%)
Strand=Plus/Plus
Query 1 GGTCAGCTGACACTCGAGCTGGTGGACTGTGGTAGCTC 38
||||||||||||||||||||||||||||||||||||||
Sbjct 670 GGTCAGCTGACACTCGAGCTGGTGGACTGTGGTAGCTC 707
> AT2G01040.1 | Symbols: | transposable element gene | chr2:65436-67139
REVERSE LENGTH=1704
Length=1704
Score = 169 bits (91), Expect = 3e-41
Identities = 106/113 (94%), Gaps = 1/113 (1%)
Strand=Plus/Plus
Query 345 ATCGGTAACACC-AATGGTGACTCGACGGATAACCAACGGGAAAGTCCACGGTGAGAACC 403
|||||||| ||| || |||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1117 ATCGGTAAGACCAAAGGGTGACTCGACGGATAACCAACGGGAAAGTCCACGGTGGGAACC 1176
Query 404 GGTGGACAAAACGGATGTTGGACCCGCGAGCAAACCAAAGGCCGACGGACGAA 456
| |||||||||||||||||||||||||||||||||| |||||||||||| |||
Sbjct 1177 GATGGACAAAACGGATGTTGGACCCGCGAGCAAACCTAAGGCCGACGGAAGAA 1229
Score = 102 bits (55), Expect = 3e-21
Identities = 62/65 (95%), Gaps = 2/65 (3%)
Strand=Plus/Plus
Query 1 GGTCAGCTGACACTCGAGCTGGTGGACTGTGGTAGCTCG-GGGATGAAGAGGTGTCTCGG 59
|||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||
Sbjct 317 GGTCAGCTGACACTCGAGCTGGTGGACTGTGGTAGCTCACGGG-TGAAGAGGTGTCTCGG 375
Query 60 CCAAA 64
|||||
Sbjct 376 CCAAA 380
Score = 82.4 bits (44), Expect = 3e-15
Identities = 48/50 (96%), Gaps = 0/50 (0%)
Strand=Plus/Plus
Query 186 CTCGACCGAACTGATGCGCATGCTACCTCCCGATCCAATGGTTCGATGGA 235
||||||||||||||||||||||||||||||| |||||| |||||||||||
Sbjct 668 CTCGACCGAACTGATGCGCATGCTACCTCCCAATCCAACGGTTCGATGGA 717
> AT2G06860.1 | Symbols: | transposable element gene | chr2:2766356-2772445
FORWARD LENGTH=2817
Length=2817
Score = 167 bits (90), Expect = 9e-41
Identities = 145/171 (85%), Gaps = 6/171 (4%)
Strand=Plus/Plus
Query 226 GTTCGATGGAATCACGAGGATAAGTGCAACCAAACACACCCAAGGGTCGCCCATGGATGC 285
|||||| |||| ||| |||||||||||| || ||||||||||||||||||||||||||||
Sbjct 2533 GTTCGA-GGAAGCACAAGGATAAGTGCATCCGAACACACCCAAGGGTCGCCCATGGATGC 2591
Query 286 AATCTCACCGGTAAAGGGAGTAAGCACCGAGAATGGGTAAG-TGACGTGGTTCACCATGA 344
||||| |||||||||||||| ||||||| ||||||| | | ||| | || | ||
Sbjct 2592 AATCTTACCGGTAAAGGGAGAAAGCACCAAGAATGGCCATGGTGAAACCGATCGG-A-GA 2649
Query 345 ATCGGTAACACCAATGG-TGACTCGACGGATAACCAACGGGAAAGTCCACG 394
||||||| ||||| || |||||||||||||||||||| ||||||||||||
Sbjct 2650 -TCGGTAAGACCAAAGGGTGACTCGACGGATAACCAACAGGAAAGTCCACG 2699
> AT4G04655.1 | Symbols: | transposable element gene | chr4:2357418-2364944
FORWARD LENGTH=7527
Length=7527
Score = 163 bits (88), Expect = 1e-39
Identities = 105/113 (93%), Gaps = 1/113 (1%)
Strand=Plus/Minus
Query 345 ATCGGTAACACC-AATGGTGACTCGACGGATAACCAACGGGAAAGTCCACGGTGAGAACC 403
|||||||| ||| || |||||||||||||||||||||||||||||||||||||| |||||
Sbjct 4868 ATCGGTAAGACCAAAGGGTGACTCGACGGATAACCAACGGGAAAGTCCACGGTGGGAACC 4809
Query 404 GGTGGACAAAACGGATGTTGGACCCGCGAGCAAACCAAAGGCCGACGGACGAA 456
| || ||||||||||||||||||||||||||||||| |||||||||||| |||
Sbjct 4808 GATGAACAAAACGGATGTTGGACCCGCGAGCAAACCTAAGGCCGACGGAAGAA 4756
Score = 148 bits (80), Expect = 3e-35
Identities = 106/118 (90%), Gaps = 3/118 (3%)
Strand=Plus/Minus
Query 226 GTTCGATGGAATCACGAGGATAAGTGCAACCAAACACACCCAAGGGTCGCCCATGGATGC 285
|||||| |||| ||| |||||||||||| || ||||||||||||||||||||||||||||
Sbjct 5049 GTTCGA-GGAAGCACAAGGATAAGTGCATCCGAACACACCCAAGGGTCGCCCATGGATGC 4991
Query 286 AATCTCACCGGTAAAGGGAGTAAGCACCGAGAATGGGTAAGTGA-CGTGGTTCACCAT 342
||||| |||| ||||||||| ||||||| |||||||||||| || |||| ||||||||
Sbjct 4990 AATCTTACCGATAAAGGGAGAAAGCACCAAGAATGGGTAAG-GAACGTGATTCACCAT 4934
Score = 100 bits (54), Expect = 1e-20
Identities = 63/67 (94%), Gaps = 2/67 (3%)
Strand=Plus/Minus
Query 1 GGTCAGCTGACACTCGAGCTGGTGGACTGTGGTAGCTCG-GGGATGAAGAGGTGTCTCGG 59
|||||||||||||||||||||||||||||||||||||| ||| |||| |||||||||||
Sbjct 5673 GGTCAGCTGACACTCGAGCTGGTGGACTGTGGTAGCTCACGGG-TGAAAAGGTGTCTCGG 5615
Query 60 CCAAAAG 66
|||||||
Sbjct 5614 CCAAAAG 5608
Score = 82.4 bits (44), Expect = 3e-15
Identities = 48/50 (96%), Gaps = 0/50 (0%)
Strand=Plus/Minus
Query 186 CTCGACCGAACTGATGCGCATGCTACCTCCCGATCCAATGGTTCGATGGA 235
|||||||||||||||||||||||||||||||| ||||| |||||||||||
Sbjct 5317 CTCGACCGAACTGATGCGCATGCTACCTCCCGGTCCAACGGTTCGATGGA 5268
Score = 60.2 bits (32), Expect = 2e-08
Identities = 36/38 (95%), Gaps = 0/38 (0%)
Strand=Plus/Minus
Query 64 AAGCAACCATTCGCCCCCTATATAAGGGAGGACGTCCA 101
||||| |||||||||||||||||||||||||||| |||
Sbjct 5477 AAGCATCCATTCGCCCCCTATATAAGGGAGGACGCCCA 5440
> AT2G01029.1 | Symbols: | transposable element gene | chr2:28465-38652
FORWARD LENGTH=10188
Length=10188
Score = 163 bits (88), Expect = 1e-39
Identities = 105/113 (93%), Gaps = 1/113 (1%)
Strand=Plus/Plus
Query 345 ATCGGTAACACC-AATGGTGACTCGACGGATAACCAACGGGAAAGTCCACGGTGAGAACC 403
||| |||| ||| || |||||||||||||||||||||||||||||||||||||| |||||
Sbjct 4094 ATCAGTAAGACCAAAGGGTGACTCGACGGATAACCAACGGGAAAGTCCACGGTGGGAACC 4153
Query 404 GGTGGACAAAACGGATGTTGGACCCGCGAGCAAACCAAAGGCCGACGGACGAA 456
| |||||||||||||||||||||||||||||||||| |||||||||||| |||
Sbjct 4154 GATGGACAAAACGGATGTTGGACCCGCGAGCAAACCTAAGGCCGACGGAAGAA 4206
Score = 163 bits (88), Expect = 1e-39
Identities = 105/113 (93%), Gaps = 1/113 (1%)
Strand=Plus/Plus
Query 345 ATCGGTAACACC-AATGGTGACTCGACGGATAACCAACGGGAAAGTCCACGGTGAGAACC 403
||| |||| ||| || |||||||||||||||||||||||||||||||||||||| |||||
Sbjct 7028 ATCAGTAAGACCAAAGGGTGACTCGACGGATAACCAACGGGAAAGTCCACGGTGGGAACC 7087
Query 404 GGTGGACAAAACGGATGTTGGACCCGCGAGCAAACCAAAGGCCGACGGACGAA 456
| |||||||||||||||||||||||||||||||||| |||||||||||| |||
Sbjct 7088 GATGGACAAAACGGATGTTGGACCCGCGAGCAAACCTAAGGCCGACGGAAGAA 7140
Score = 148 bits (80), Expect = 3e-35
Identities = 106/118 (90%), Gaps = 3/118 (3%)
Strand=Plus/Plus
Query 226 GTTCGATGGAATCACGAGGATAAGTGCAACCAAACACACCCAAGGGTCGCCCATGGATGC 285
|||||| |||| ||| |||||||||||| || ||||||||||||||||||||||||||||
Sbjct 3913 GTTCGA-GGAAGCACAAGGATAAGTGCATCCGAACACACCCAAGGGTCGCCCATGGATGC 3971
Query 286 AATCTCACCGGTAAAGGGAGTAAGCACCGAGAATGGGTAAGTGA-CGTGGTTCACCAT 342
||||| |||| ||||||||| ||||||| |||||||||||| || |||| ||||||||
Sbjct 3972 AATCTTACCGATAAAGGGAGAAAGCACCAAGAATGGGTAAG-GAACGTGATTCACCAT 4028
Score = 143 bits (77), Expect = 2e-33
Identities = 106/119 (89%), Gaps = 5/119 (4%)
Strand=Plus/Plus
Query 226 GTTCGATGGAATCACGAGGATAAGTGCAACCAAACACACCCAAGGGTCGCCCATGGATGC 285
|||||| |||| ||| |||||||||||| || ||||||||||||||||||||||||||||
Sbjct 6847 GTTCGA-GGAAGCACAAGGATAAGTGCATCCGAACACACCCAAGGGTCGCCCATGGATGC 6905
Query 286 AATCTCACCG-GTAAAGGGAGTAAGCACCGAGAATGGGTAAGTGA-CGTGGTTCACCAT 342
||||| |||| | |||||||| ||||||| |||||||||||| || |||| ||||||||
Sbjct 6906 AATCTTACCGAG-AAAGGGAGAAAGCACCAAGAATGGGTAAG-GAACGTGATTCACCAT 6962
Score = 106 bits (57), Expect = 2e-22
Identities = 64/67 (96%), Gaps = 2/67 (3%)
Strand=Plus/Plus
Query 1 GGTCAGCTGACACTCGAGCTGGTGGACTGTGGTAGCTCG-GGGATGAAGAGGTGTCTCGG 59
|||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||
Sbjct 6227 GGTCAGCTGACACTCGAGCTGGTGGACTGTGGTAGCTCACGGG-TGAAGAGGTGTCTCGG 6285
Query 60 CCAAAAG 66
|||||||
Sbjct 6286 CCAAAAG 6292
Score = 82.4 bits (44), Expect = 3e-15
Identities = 48/50 (96%), Gaps = 0/50 (0%)
Strand=Plus/Plus
Query 186 CTCGACCGAACTGATGCGCATGCTACCTCCCGATCCAATGGTTCGATGGA 235
|||||||||||||||||||||||||||||||| ||||| |||||||||||
Sbjct 3645 CTCGACCGAACTGATGCGCATGCTACCTCCCGGTCCAACGGTTCGATGGA 3694
Score = 82.4 bits (44), Expect = 3e-15
Identities = 48/50 (96%), Gaps = 0/50 (0%)
Strand=Plus/Plus
Query 186 CTCGACCGAACTGATGCGCATGCTACCTCCCGATCCAATGGTTCGATGGA 235
|||||||||||||||||||||||||||||||| ||||| |||||||||||
Sbjct 6579 CTCGACCGAACTGATGCGCATGCTACCTCCCGGTCCAAGGGTTCGATGGA 6628
> AT5G32481.1 | Symbols: | transposable element gene | chr5:12106066-12110796
REVERSE LENGTH=4731
Length=4731
Score = 158 bits (85), Expect = 6e-38
Identities = 105/114 (92%), Gaps = 3/114 (3%)
Strand=Plus/Plus
Query 345 ATCGGTAACACC-AATGGTGACTCGACGGATAACCAACGGGAAAGTCCACGGT-GAGAAC 402
|||||||| ||| || |||||||||||||||||||||| |||||||||||||| || |||
Sbjct 1614 ATCGGTAAGACCAAAGGGTGACTCGACGGATAACCAACTGGAAAGTCCACGGTGGA-AAC 1672
Query 403 CGGTGGACAAAACGGATGTTGGACCCGCGAGCAAACCAAAGGCCGACGGACGAA 456
|| |||||||||||||||||||||||||||||||||| |||||||||||| |||
Sbjct 1673 CGATGGACAAAACGGATGTTGGACCCGCGAGCAAACCTAAGGCCGACGGAAGAA 1726
Score = 60.2 bits (32), Expect = 2e-08
Identities = 36/38 (95%), Gaps = 0/38 (0%)
Strand=Plus/Plus
Query 64 AAGCAACCATTCGCCCCCTATATAAGGGAGGACGTCCA 101
||||| |||||||||||||||||||||||||||| |||
Sbjct 1010 AAGCATCCATTCGCCCCCTATATAAGGGAGGACGCCCA 1047
> AT5G32540.1 | Symbols: | transposable element gene | chr5:12195731-12199558
FORWARD LENGTH=3828
Length=3828
Score = 158 bits (85), Expect = 6e-38
Identities = 104/113 (92%), Gaps = 2/113 (2%)
Strand=Plus/Plus
Query 345 ATCGGTAACACC-AATGGTGACTCGACGGATAACCAACGGGAAAGTCCACGGTGAGAACC 403
|||||||| ||| || ||||||||||||||||||||||||||||||| ||| ||| ||||
Sbjct 2186 ATCGGTAAGACCAAAGGGTGACTCGACGGATAACCAACGGGAAAGTCTACGTTGA-AACC 2244
Query 404 GGTGGACAAAACGGATGTTGGACCCGCGAGCAAACCAAAGGCCGACGGACGAA 456
| |||||||||||||||||||||||||||||||||| |||||||||||| |||
Sbjct 2245 GATGGACAAAACGGATGTTGGACCCGCGAGCAAACCTAAGGCCGACGGAAGAA 2297
Score = 91.6 bits (49), Expect = 6e-18
Identities = 60/65 (92%), Gaps = 2/65 (3%)
Strand=Plus/Plus
Query 1 GGTCAGCTGACACTCGAGCTGGTGGACTGTGGTAGCTCG-GGGATGAAGAGGTGTCTCGG 59
|||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||
Sbjct 1376 GGTCAGCTGACACTCGAGCTGGTGGACTGTGGTAGCTCACGGG-TGAAGAGGTGTCTCAA 1434
Query 60 CCAAA 64
|||||
Sbjct 1435 CCAAA 1439
> AT3G47240.1 | Symbols: | transposable element gene | chr3:17393861-17394988
REVERSE LENGTH=720
Length=720
Score = 158 bits (85), Expect = 6e-38
Identities = 104/113 (92%), Gaps = 1/113 (1%)
Strand=Plus/Plus
Query 345 ATCGGTAACACC-AATGGTGACTCGACGGATAACCAACGGGAAAGTCCACGGTGAGAACC 403
|||||||| ||| || |||||||||||||||||||||||||||||||||||||| |||||
Sbjct 582 ATCGGTAAGACCAAAGGGTGACTCGACGGATAACCAACGGGAAAGTCCACGGTGGGAACC 641
Query 404 GGTGGACAAAACGGATGTTGGACCCGCGAGCAAACCAAAGGCCGACGGACGAA 456
| |||||||||||||||||||||||| ||||||||| || ||||||||| |||
Sbjct 642 GATGGACAAAACGGATGTTGGACCCGTGAGCAAACCTAACGCCGACGGAGGAA 694
Score = 143 bits (77), Expect = 2e-33
Identities = 94/102 (92%), Gaps = 2/102 (2%)
Strand=Plus/Plus
Query 1 GGTCAGCTGACACTCGAGCTGGTGGACTGTGGTAGCTC-GGGGATGAAGAGGTGTCTCGG 59
||||| |||||||||||||| || |||||||||||||| ||| ||||||||||||||||
Sbjct 88 GGTCATCTGACACTCGAGCTAGTTGACTGTGGTAGCTCACGGG-TGAAGAGGTGTCTCGG 146
Query 60 CCAAAAGCAACCATTCGCCCCCTATATAAGGGAGGACGTCCA 101
||||||||| |||||||||||||||||||||||||||| |||
Sbjct 147 CCAAAAGCATCCATTCGCCCCCTATATAAGGGAGGACGCCCA 188
Score = 135 bits (73), Expect = 3e-31
Identities = 92/101 (91%), Gaps = 2/101 (2%)
Strand=Plus/Plus
Query 243 GGATAAGTGCAACCAAACACACCCAAGGGTCGCCCATGGATGCAATCTCACCGGTAAAGG 302
||||||||||| || |||||||||||||||||||||||||||||||| |||||||||||
Sbjct 417 GGATAAGTGCATCCGGACACACCCAAGGGTCGCCCATGGATGCAATCTTACCGGTAAAGG 476
Query 303 GAGTAAGCACCGAGAATGGGTAAGTGA-CGTGGTTCACCAT 342
||| ||||||| |||||||||||| || |||| ||||||||
Sbjct 477 GAGAAAGCACCAAGAATGGGTAAG-GAACGTGATTCACCAT 516
> AT2G12540.1 | Symbols: | transposable element gene | chr2:5108873-5110827
REVERSE LENGTH=1955
Length=1955
Score = 158 bits (85), Expect = 6e-38
Identities = 104/113 (92%), Gaps = 1/113 (1%)
Strand=Plus/Minus
Query 345 ATCGGTAACACC-AATGGTGACTCGACGGATAACCAACGGGAAAGTCCACGGTGAGAACC 403
|||||||| ||| || ||||||||||||||||||||||||||||||||||||| | ||||
Sbjct 932 ATCGGTAAGACCAAAGGGTGACTCGACGGATAACCAACGGGAAAGTCCACGGTAAAAACC 873
Query 404 GGTGGACAAAACGGATGTTGGACCCGCGAGCAAACCAAAGGCCGACGGACGAA 456
| |||||||||||||||||||||||| ||||||||| |||||||||||| |||
Sbjct 872 GATGGACAAAACGGATGTTGGACCCGTGAGCAAACCTAAGGCCGACGGAAGAA 820
Score = 134 bits (72), Expect = 1e-30
Identities = 104/119 (87%), Gaps = 4/119 (3%)
Strand=Plus/Minus
Query 226 GTTCGATGGAATCACGAGGATAAGTGCAACCAAACACACCCAAGGGTCGCCCATGGATGC 285
|||||| |||| ||| | |||||||||| |||||||||||||||||||||||||||||||
Sbjct 1114 GTTCGA-GGAAGCACAAAGATAAGTGCATCCAAACACACCCAAGGGTCGCCCATGGATGC 1056
Query 286 AATCTCACCGGTAAAGGGAGTAAGCACCGAGAATGGGTAAGTGA--CGTGGTTCACCAT 342
||||| ||| |||||||||| |||| | |||||||||||| || |||| ||||||||
Sbjct 1055 AATCTTACCAGTAAAGGGAGAAAGCTTCAAGAATGGGTAAG-GAAACGTGATTCACCAT 998
Score = 78.7 bits (42), Expect = 5e-14
Identities = 60/68 (88%), Gaps = 4/68 (6%)
Strand=Plus/Minus
Query 1 GGTCAGCTGACACTCGAGCTGGTGGACTGTGGTAGCTCGGG-GATGAAGAGG-TGTCTCG 58
|||||||||||||||||||||||||||||||||||||| | |||| | | |||||||
Sbjct 1738 GGTCAGCTGACACTCGAGCTGGTGGACTGTGGTAGCTCACCCG-TGAA-ACGATGTCTCG 1681
Query 59 GCCAAAAG 66
||||||||
Sbjct 1680 GCCAAAAG 1673
Score = 60.2 bits (32), Expect = 2e-08
Identities = 36/38 (95%), Gaps = 0/38 (0%)
Strand=Plus/Minus
Query 64 AAGCAACCATTCGCCCCCTATATAAGGGAGGACGTCCA 101
||||| |||||||||||||||||||||||||||| |||
Sbjct 1536 AAGCATCCATTCGCCCCCTATATAAGGGAGGACGCCCA 1499
> AT1G54926.1 | Symbols: | transposable element gene | chr1:20476624-20477773
REVERSE LENGTH=822
Length=822
Score = 158 bits (85), Expect = 6e-38
Identities = 104/113 (92%), Gaps = 1/113 (1%)
Strand=Plus/Plus
Query 345 ATCGGTAACACC-AATGGTGACTCGACGGATAACCAACGGGAAAGTCCACGGTGAGAACC 403
|||||||| ||| || ||||||||||||||||| |||||||||||||||| ||| |||||
Sbjct 684 ATCGGTAAGACCAAAGGGTGACTCGACGGATAAACAACGGGAAAGTCCACTGTGGGAACC 743
Query 404 GGTGGACAAAACGGATGTTGGACCCGCGAGCAAACCAAAGGCCGACGGACGAA 456
| |||||||||||||||||||||||||||||||||| |||||||||||| |||
Sbjct 744 GATGGACAAAACGGATGTTGGACCCGCGAGCAAACCTAAGGCCGACGGAAGAA 796
Score = 65.8 bits (35), Expect = 4e-10
Identities = 37/38 (97%), Gaps = 0/38 (0%)
Strand=Plus/Plus
Query 186 CTCGACCGAACTGATGCGCATGCTACCTCCCGATCCAA 223
|||||||||||||||||||||||||||||||| |||||
Sbjct 327 CTCGACCGAACTGATGCGCATGCTACCTCCCGGTCCAA 364
> AT4G00140.1 | Symbols: EDA34 | Calcium-binding EF-hand family
protein | chr4:51166-53449 REVERSE LENGTH=774
Length=774
Score = 154 bits (83), Expect = 7e-37
Identities = 107/118 (91%), Gaps = 3/118 (3%)
Strand=Plus/Plus
Query 226 GTTCGATGGAATCACGAGGATAAGTGCAACCAAACACACCCAAGGGTCGCCCATGGATGC 285
|||||| |||| ||| |||||||||||| || ||||||||||||||||||||||||||||
Sbjct 539 GTTCGA-GGAAGCACAAGGATAAGTGCATCCGAACACACCCAAGGGTCGCCCATGGATGC 597
Query 286 AATCTCACCGGTAAAGGGAGTAAGCACCGAGAATGGGTAAGTGA-CGTGGTTCACCAT 342
||||| |||||||||||||| ||||||| |||||||||||| || |||| ||||||||
Sbjct 598 AATCTTACCGGTAAAGGGAGAAAGCACCAAGAATGGGTAAG-GAACGTGATTCACCAT 654
Score = 78.7 bits (42), Expect = 5e-14
Identities = 51/55 (93%), Gaps = 1/55 (2%)
Strand=Plus/Plus
Query 345 ATCGGTAACACC-AATGGTGACTCGACGGATAACCAACGGGAAAGTCCACGGTGA 398
|||||||| ||| || |||||||||| ||||||||||||||||||||||||||||
Sbjct 720 ATCGGTAAGACCAAAGGGTGACTCGATGGATAACCAACGGGAAAGTCCACGGTGA 774
> AT5G28110.1 | Symbols: | transposable element gene | chr5:10108331-10111154
FORWARD LENGTH=1482
Length=1482
Score = 152 bits (82), Expect = 3e-36
Identities = 92/97 (95%), Gaps = 0/97 (0%)
Strand=Plus/Plus
Query 360 GGTGACTCGACGGATAACCAACGGGAAAGTCCACGGTGAGAACCGGTGGACAAAACGGAT 419
|||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||
Sbjct 1128 GGTGACTCGACGGATAACCAACGGGAAAGTCCACGGTGGGAACCGATGGACAAAACGGAT 1187
Query 420 GTTGGACCCGCGAGCAAACCAAAGGCCGACGGACGAA 456
||||||||| |||||||||| |||||||||||| |||
Sbjct 1188 GTTGGACCCACGAGCAAACCTAAGGCCGACGGAAGAA 1224
Score = 91.6 bits (49), Expect = 6e-18
Identities = 58/62 (94%), Gaps = 2/62 (3%)
Strand=Plus/Plus
Query 6 GCTGACACTCGAGCTGGTGGACTGTGGTAGCTCG-GGGATGAAGAGGTGTCTCGGCCAAA 64
||||||||||||||||||||||||||||||||| ||| |||| ||||||||||||||||
Sbjct 720 GCTGACACTCGAGCTGGTGGACTGTGGTAGCTCACGGG-TGAAAAGGTGTCTCGGCCAAA 778
Query 65 AG 66
||
Sbjct 779 AG 780
Score = 87.9 bits (47), Expect = 8e-17
Identities = 49/50 (98%), Gaps = 0/50 (0%)
Strand=Plus/Plus
Query 186 CTCGACCGAACTGATGCGCATGCTACCTCCCGATCCAATGGTTCGATGGA 235
|||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 804 CTCGACCGAACTGATGCGCATGCTACCTCCCGATCCAACGGTTCGATGGA 853
> AT5G28120.1 | Symbols: | transposable element gene | chr5:10111393-10114354
FORWARD LENGTH=1521
Length=1521
Score = 152 bits (82), Expect = 3e-36
Identities = 92/97 (95%), Gaps = 0/97 (0%)
Strand=Plus/Plus
Query 360 GGTGACTCGACGGATAACCAACGGGAAAGTCCACGGTGAGAACCGGTGGACAAAACGGAT 419
|||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||
Sbjct 1128 GGTGACTCGACGGATAACCAACGGGAAAGTCCACGGTGGGAACCGATGGACAAAACGGAT 1187
Query 420 GTTGGACCCGCGAGCAAACCAAAGGCCGACGGACGAA 456
||||||||| |||||||||| |||||||||||| |||
Sbjct 1188 GTTGGACCCACGAGCAAACCTAAGGCCGACGGAAGAA 1224
Score = 91.6 bits (49), Expect = 6e-18
Identities = 58/62 (94%), Gaps = 2/62 (3%)
Strand=Plus/Plus
Query 6 GCTGACACTCGAGCTGGTGGACTGTGGTAGCTCG-GGGATGAAGAGGTGTCTCGGCCAAA 64
||||||||||||||||||||||||||||||||| ||| |||| ||||||||||||||||
Sbjct 720 GCTGACACTCGAGCTGGTGGACTGTGGTAGCTCACGGG-TGAAAAGGTGTCTCGGCCAAA 778
Query 65 AG 66
||
Sbjct 779 AG 780
Score = 87.9 bits (47), Expect = 8e-17
Identities = 49/50 (98%), Gaps = 0/50 (0%)
Strand=Plus/Plus
Query 186 CTCGACCGAACTGATGCGCATGCTACCTCCCGATCCAATGGTTCGATGGA 235
|||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 804 CTCGACCGAACTGATGCGCATGCTACCTCCCGATCCAACGGTTCGATGGA 853
> AT3G33189.1 | Symbols: | transposable element gene | chr3:14028344-14029295
FORWARD LENGTH=952
Length=952
Score = 152 bits (82), Expect = 3e-36
Identities = 101/110 (92%), Gaps = 1/110 (1%)
Strand=Plus/Plus
Query 348 GGTAACACC-AATGGTGACTCGACGGATAACCAACGGGAAAGTCCACGGTGAGAACCGGT 406
||||| ||| || ||||||||||||||||||||||||||||||||| |||| |||||| |
Sbjct 365 GGTAAGACCAAAGGGTGACTCGACGGATAACCAACGGGAAAGTCCATGGTGGGAACCGAT 424
Query 407 GGACAAAACGGATGTTGGACCCGCGAGCAAACCAAAGGCCGACGGACGAA 456
||||||||||||| ||||||||||||||||||| |||||||||||| |||
Sbjct 425 GGACAAAACGGATATTGGACCCGCGAGCAAACCTAAGGCCGACGGAAGAA 474
> AT5G29060.2 | Symbols: | transposable element gene | chr5:11128470-11129537
REVERSE LENGTH=1068
Length=1068
Score = 148 bits (80), Expect = 3e-35
Identities = 106/118 (90%), Gaps = 3/118 (3%)
Strand=Plus/Plus
Query 226 GTTCGATGGAATCACGAGGATAAGTGCAACCAAACACACCCAAGGGTCGCCCATGGATGC 285
|||||| |||| ||| |||||||||||| || ||||||| ||||||||||||||||||||
Sbjct 754 GTTCGA-GGAAGCACAAGGATAAGTGCATCCGAACACACTCAAGGGTCGCCCATGGATGC 812
Query 286 AATCTCACCGGTAAAGGGAGTAAGCACCGAGAATGGGTAAGTGA-CGTGGTTCACCAT 342
|||||||||| ||||||||| ||||||| |||||||||||| || |||| ||||||||
Sbjct 813 AATCTCACCGATAAAGGGAGAAAGCACCAAGAATGGGTAAG-GAACGTGATTCACCAT 869
Score = 82.4 bits (44), Expect = 3e-15
Identities = 48/50 (96%), Gaps = 0/50 (0%)
Strand=Plus/Plus
Query 186 CTCGACCGAACTGATGCGCATGCTACCTCCCGATCCAATGGTTCGATGGA 235
|||||||||||||||||||||||||||||||| ||||| |||||||||||
Sbjct 585 CTCGACCGAACTGATGCGCATGCTACCTCCCGGTCCAACGGTTCGATGGA 634
> AT2G21460.1 | Symbols: | transposable element gene | chr2:9188338-9194491
REVERSE LENGTH=6154
Length=6154
Score = 148 bits (80), Expect = 3e-35
Identities = 106/118 (90%), Gaps = 3/118 (3%)
Strand=Plus/Plus
Query 226 GTTCGATGGAATCACGAGGATAAGTGCAACCAAACACACCCAAGGGTCGCCCATGGATGC 285
|||||| |||| ||| |||||||||||| || ||||||||||||||||||||||||||||
Sbjct 1710 GTTCGA-GGAAGCACAAGGATAAGTGCATCCGAACACACCCAAGGGTCGCCCATGGATGC 1768
Query 286 AATCTCACCGGTAAAGGGAGTAAGCACCGAGAATGGGTAAGTGA-CGTGGTTCACCAT 342
||||| |||| ||||||||| ||||||| |||||||||||| || |||| ||||||||
Sbjct 1769 AATCTTACCGATAAAGGGAGAAAGCACCAAGAATGGGTAAG-GAACGTGATTCACCAT 1825
Score = 147 bits (79), Expect = 1e-34
Identities = 102/113 (90%), Gaps = 1/113 (1%)
Strand=Plus/Plus
Query 345 ATCGGTAACACC-AATGGTGACTCGACGGATAACCAACGGGAAAGTCCACGGTGAGAACC 403
|||||||| || || |||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1891 ATCGGTAAGTCCAAAGGGTGACTCGACGGATAACCAACGGGAAAGTCCACGGTGGGAACC 1950
Query 404 GGTGGACAAAACGGATGTTGGACCCGCGAGCAAACCAAAGGCCGACGGACGAA 456
| ||||||||||||||||||||||| | |||||||| ||| |||||||| |||
Sbjct 1951 GATGGACAAAACGGATGTTGGACCCACAAGCAAACCTAAGACCGACGGAAGAA 2003
Score = 102 bits (55), Expect = 3e-21
Identities = 62/65 (95%), Gaps = 2/65 (3%)
Strand=Plus/Plus
Query 2 GTCAGCTGACACTCGAGCTGGTGGACTGTGGTAGCTCG-GGGATGAAGAGGTGTCTCGGC 60
||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||
Sbjct 1050 GTCAGCTGACACTCGAGCTGGTGGACTGTGGTAGCTCACGGG-TGAAGAGGTGTCTCGGC 1108
Query 61 CAAAA 65
|||||
Sbjct 1109 CAAAA 1113
> AT1G41797.1 | Symbols: | transposable element gene | chr1:15560039-15563509
REVERSE LENGTH=3471
Length=3471
Score = 148 bits (80), Expect = 3e-35
Identities = 106/118 (90%), Gaps = 3/118 (3%)
Strand=Plus/Minus
Query 226 GTTCGATGGAATCACGAGGATAAGTGCAACCAAACACACCCAAGGGTCGCCCATGGATGC 285
|||| | |||| ||| |||||||||||| || ||||||||||||||||||||||||||||
Sbjct 583 GTTC-AAGGAAGCACAAGGATAAGTGCATCCGAACACACCCAAGGGTCGCCCATGGATGC 525
Query 286 AATCTCACCGGTAAAGGGAGTAAGCACCGAGAATGGGTAAGTGA-CGTGGTTCACCAT 342
||||| |||||||||||||| ||||||| |||||||||||| || |||| ||||||||
Sbjct 524 AATCTTACCGGTAAAGGGAGAAAGCACCAAGAATGGGTAAG-GAACGTGATTCACCAT 468
Score = 87.9 bits (47), Expect = 8e-17
Identities = 61/67 (91%), Gaps = 4/67 (6%)
Strand=Plus/Minus
Query 1 GGTCAGCTGACACTCGAGCTGGTGGACTGTGGTAGCTC-GGGGATGAAGAGGTGTCTCGG 59
||||||||||||||||||||||||||| ||||||||| || ||||||||||||||||
Sbjct 1200 GGTCAGCTGACACTCGAGCTGGTGGAC--TGGTAGCTCACAGG-TGAAGAGGTGTCTCGG 1144
Query 60 CCAAAAG 66
|||||||
Sbjct 1143 CCAAAAG 1137
Score = 67.6 bits (36), Expect = 1e-10
Identities = 62/73 (85%), Gaps = 7/73 (10%)
Strand=Plus/Minus
Query 64 AAGCAACCATTCGCCCCCTATATAAGGGAGGACGTCCACACCAT--CTCACA--ATGCCC 119
||||| |||||||||||||||||||||||||||| ||| || || |||||| || | |
Sbjct 1001 AAGCATCCATTCGCCCCCTATATAAGGGAGGACGCCCA-ACGATATCTCACATCAT-CTC 944
Query 120 ACAACGATCCAAA 132
||||| |||||||
Sbjct 943 ACAAC-ATCCAAA 932
> AT5G31873.1 | Symbols: | transposable element gene | chr5:11746240-11747771
FORWARD LENGTH=816
Length=816
Score = 147 bits (79), Expect = 1e-34
Identities = 91/97 (94%), Gaps = 0/97 (0%)
Strand=Plus/Plus
Query 360 GGTGACTCGACGGATAACCAACGGGAAAGTCCACGGTGAGAACCGGTGGACAAAACGGAT 419
|||||||||| |||||||| |||||||||||||||||| |||||| ||||||||||||||
Sbjct 534 GGTGACTCGATGGATAACCCACGGGAAAGTCCACGGTGGGAACCGATGGACAAAACGGAT 593
Query 420 GTTGGACCCGCGAGCAAACCAAAGGCCGACGGACGAA 456
|||||||||||||||||||| |||||||||||| |||
Sbjct 594 GTTGGACCCGCGAGCAAACCTAAGGCCGACGGAAGAA 630
Score = 76.8 bits (41), Expect = 2e-13
Identities = 47/50 (94%), Gaps = 0/50 (0%)
Strand=Plus/Plus
Query 186 CTCGACCGAACTGATGCGCATGCTACCTCCCGATCCAATGGTTCGATGGA 235
|||||||||||||||||||||||||||| ||| ||||| |||||||||||
Sbjct 210 CTCGACCGAACTGATGCGCATGCTACCTTCCGGTCCAACGGTTCGATGGA 259
> AT3G30816.1 | Symbols: | transposable element gene | chr3:12511659-12513384
FORWARD LENGTH=1029
Length=1029
Score = 147 bits (79), Expect = 1e-34
Identities = 91/97 (94%), Gaps = 0/97 (0%)
Strand=Plus/Plus
Query 360 GGTGACTCGACGGATAACCAACGGGAAAGTCCACGGTGAGAACCGGTGGACAAAACGGAT 419
|||||||||| ||||||||||||||||||||||| ||| |||||| ||||||||||||||
Sbjct 639 GGTGACTCGATGGATAACCAACGGGAAAGTCCACCGTGGGAACCGATGGACAAAACGGAT 698
Query 420 GTTGGACCCGCGAGCAAACCAAAGGCCGACGGACGAA 456
|||||||||||||||||||| |||||||||||| |||
Sbjct 699 GTTGGACCCGCGAGCAAACCTAAGGCCGACGGAAGAA 735
Score = 128 bits (69), Expect = 4e-29
Identities = 88/97 (91%), Gaps = 1/97 (1%)
Strand=Plus/Plus
Query 226 GTTCGATGGAATCACGAGGATAAGTGCAACCAAACACACCCAAGGGTCGCCCATGGATGC 285
|||||| |||| ||| |||||||||||| || ||||||||||||||||||||||||||||
Sbjct 544 GTTCGA-GGAAGCACAAGGATAAGTGCATCCGAACACACCCAAGGGTCGCCCATGGATGC 602
Query 286 AATCTCACCGGTAAAGGGAGTAAGCACCGAGAATGGG 322
||||| |||| ||||||||| ||||||| ||||||||
Sbjct 603 AATCTTACCGATAAAGGGAGAAAGCACCAAGAATGGG 639
Score = 102 bits (55), Expect = 3e-21
Identities = 62/65 (95%), Gaps = 2/65 (3%)
Strand=Plus/Plus
Query 1 GGTCAGCTGACACTCGAGCTGGTGGACTGTGGTAGCTCG-GGGATGAAGAGGTGTCTCGG 59
|||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||
Sbjct 76 GGTCAGCTGACACTCGAGCTGGTGGACTGTGGTAGCTCACGGG-TGAAGAGGTGTCTCGG 134
Query 60 CCAAA 64
|||||
Sbjct 135 CCAAA 139
> AT4G06495.1 | Symbols: | transposable element gene | chr4:3133802-3135016
FORWARD LENGTH=1215
Length=1215
Score = 143 bits (77), Expect = 2e-33
Identities = 105/118 (89%), Gaps = 3/118 (3%)
Strand=Plus/Plus
Query 226 GTTCGATGGAATCACGAGGATAAGTGCAACCAAACACACCCAAGGGTCGCCCATGGATGC 285
|||||| |||| ||| |||||||||||| || |||| |||||||||||||||||||||||
Sbjct 793 GTTCGA-GGAAGCACAAGGATAAGTGCATCCGAACAAACCCAAGGGTCGCCCATGGATGC 851
Query 286 AATCTCACCGGTAAAGGGAGTAAGCACCGAGAATGGGTAAGTGA-CGTGGTTCACCAT 342
||||| |||||||||||||| ||||||| |||||||||||| || ||| ||||||||
Sbjct 852 AATCTTACCGGTAAAGGGAGAAAGCACCAAGAATGGGTAAG-GAACGTTATTCACCAT 908
Score = 135 bits (73), Expect = 3e-31
Identities = 101/114 (89%), Gaps = 3/114 (3%)
Strand=Plus/Plus
Query 345 ATCGGTAACACC-AATGGTGACTCGACGGATAACCAACGGGAAAGTCCACGGTGAGAACC 403
|||||||| ||| || |||||||||||||||||||||||||||||||||||||| |||||
Sbjct 974 ATCGGTAAAACCAAAGGGTGACTCGACGGATAACCAACGGGAAAGTCCACGGTGGGAACC 1033
Query 404 GGTGGACAAAACGGATGTTGGACCCGCGAGCA-AACCAAAGGCCGACGGACGAA 456
| ||||||||||||||| ||||||||| | |||| |||||||||||| |||
Sbjct 1034 CATAGACAAAACGGATGTTAAACCCGCGAG-AGAACCTAAGGCCGACGGAAGAA 1086
Score = 60.2 bits (32), Expect = 2e-08
Identities = 36/38 (95%), Gaps = 0/38 (0%)
Strand=Plus/Plus
Query 64 AAGCAACCATTCGCCCCCTATATAAGGGAGGACGTCCA 101
||||| |||||||||||||||||||||||||||| |||
Sbjct 382 AAGCATCCATTCGCCCCCTATATAAGGGAGGACGCCCA 419
> AT4G06496.1 | Symbols: | transposable element gene | chr4:3136680-3137837
FORWARD LENGTH=1158
Length=1158
Score = 143 bits (77), Expect = 2e-33
Identities = 105/118 (89%), Gaps = 3/118 (3%)
Strand=Plus/Plus
Query 226 GTTCGATGGAATCACGAGGATAAGTGCAACCAAACACACCCAAGGGTCGCCCATGGATGC 285
||| || |||| ||| |||||||||||| || ||||||||||||||||||||||||||||
Sbjct 847 GTTTGA-GGAAGCACAAGGATAAGTGCATCCGAACACACCCAAGGGTCGCCCATGGATGC 905
Query 286 AATCTCACCGGTAAAGGGAGTAAGCACCGAGAATGGGTAAGTGA-CGTGGTTCACCAT 342
||||| |||||||||||||| ||||||| |||||||||||| || | || ||||||||
Sbjct 906 AATCTTACCGGTAAAGGGAGAAAGCACCAAGAATGGGTAAG-GAACATGATTCACCAT 962
> AT4G08095.1 | Symbols: | transposable element gene | chr4:4998060-5001542
REVERSE LENGTH=3483
Length=3483
Score = 137 bits (74), Expect = 7e-32
Identities = 99/111 (89%), Gaps = 2/111 (2%)
Strand=Plus/Plus
Query 343 GAATCGGTAACACC-AATGGTGACTCGACGGATAACCAACGGGAAAGTCCACGGTGAGAA 401
||| || ||| ||| || ||||||||||||||||||||||||||||||| |||||| |||
Sbjct 972 GAA-CGATAAGACCAAAGGGTGACTCGACGGATAACCAACGGGAAAGTCTACGGTGGGAA 1030
Query 402 CCGGTGGACAAAACGGATGTTGGACCCGCGAGCAAACCAAAGGCCGACGGA 452
||| ||||||||||||||||||||| ||||||||||| |||| |||||||
Sbjct 1031 CCGATGGACAAAACGGATGTTGGACTCGCGAGCAAACGTAAGGTCGACGGA 1081
Score = 97.1 bits (52), Expect = 1e-19
Identities = 61/65 (94%), Gaps = 2/65 (3%)
Strand=Plus/Plus
Query 2 GTCAGCTGACACTCGAGCTGGTGGACTGTGGTAGCTCG-GGGATGAAGAGGTGTCTCGGC 60
|||||||||||||||||||||||||||||||||| || ||| |||||||||||||||||
Sbjct 305 GTCAGCTGACACTCGAGCTGGTGGACTGTGGTAGATCAAGGG-TGAAGAGGTGTCTCGGC 363
Query 61 CAAAA 65
|||||
Sbjct 364 CAAAA 368
> AT2G12530.1 | Symbols: | transposable element gene | chr2:5106678-5106974
REVERSE LENGTH=297
Length=297
Score = 128 bits (69), Expect = 4e-29
Identities = 103/119 (87%), Gaps = 4/119 (3%)
Strand=Plus/Minus
Query 226 GTTCGATGGAATCACGAGGATAAGTGCAACCAAACACACCCAAGGGTCGCCCATGGATGC 285
|||||| |||| ||| | |||||||||| |||||||||||||||||||||||||||||||
Sbjct 234 GTTCGA-GGAAGCACAAAGATAAGTGCATCCAAACACACCCAAGGGTCGCCCATGGATGC 176
Query 286 AATCTCACCGGTAAAGGGAGTAAGCACCGAGAATGGGTAAGTGA--CGTGGTTCACCAT 342
||||| ||| |||||||||| |||| | |||||| ||||| || |||| ||||||||
Sbjct 175 AATCTTACCAGTAAAGGGAGAAAGCTTCAAGAATGAGTAAG-GAAACGTGATTCACCAT 118
> AT4G08111.1 | Symbols: | transposable element gene | chr4:5055667-5057174
REVERSE LENGTH=690
Length=690
Score = 117 bits (63), Expect = 1e-25
Identities = 71/75 (95%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 382 GGGAAAGTCCACGGTGAGAACCGGTGGACAAAACGGATGTTGGACCCGCGAGCAAACCAA 441
|||||||||||||||| |||||| |||||||||||||||||||||||||||||||||| |
Sbjct 61 GGGAAAGTCCACGGTGGGAACCGATGGACAAAACGGATGTTGGACCCGCGAGCAAACCTA 120
Query 442 AGGCCGACGGACGAA 456
||||||||||| |||
Sbjct 121 AGGCCGACGGAAGAA 135
> AT2G12385.1 | Symbols: | transposable element gene | chr2:4991988-4995221
REVERSE LENGTH=3234
Length=3234
Score = 113 bits (61), Expect = 1e-24
Identities = 100/118 (85%), Gaps = 6/118 (5%)
Strand=Plus/Plus
Query 226 GTTCGATGGAATCACGAGGATAAGTGCAACCAAACACACCCAAGGGTCGCCCATGGATGC 285
|||||| |||| ||| | |||||||||| || ||||||||||||||||||||||||||||
Sbjct 2298 GTTCGA-GGAAGCACAAAGATAAGTGCATCCGAACACACCCAAGGGTCGCCCATGGATGC 2356
Query 286 AATCTCACCGGTAAAGGGA-GTAAGCACCGA-GAATGGGTAAGTGA-CGTGGTTCACC 340
||| | |||| |||| ||| | ||||||||| || ||||||| || |||| ||||||
Sbjct 2357 AATATTACCGATAAAAGGAAGAAAGCACCGAAGA-TGGGTAAA-GAACGTGATTCACC 2412
> AT4G08750.1 | Symbols: | transposable element gene | chr4:5580236-5583144
REVERSE LENGTH=1386
Length=1386
Score = 106 bits (57), Expect = 2e-22
Identities = 64/67 (96%), Gaps = 2/67 (3%)
Strand=Plus/Minus
Query 1 GGTCAGCTGACACTCGAGCTGGTGGACTGTGGTAGCTCG-GGGATGAAGAGGTGTCTCGG 59
|||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||
Sbjct 778 GGTCAGCTGACACTCGAGCTGGTGGACTGTGGTAGCTCACGGG-TGAAGAGGTGTCTCGG 720
Query 60 CCAAAAG 66
|||||||
Sbjct 719 CCAAAAG 713
> AT3G45095.1 | Symbols: | transposable element gene | chr3:16499710-16504054
REVERSE LENGTH=4345
Length=4345
Score = 106 bits (57), Expect = 2e-22
Identities = 64/67 (96%), Gaps = 2/67 (3%)
Strand=Plus/Minus
Query 1 GGTCAGCTGACACTCGAGCTGGTGGACTGTGGTAGCTCG-GGGATGAAGAGGTGTCTCGG 59
|||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||
Sbjct 2855 GGTCAGCTGACACTCGAGCTGGTGGACTGTGGTAGCTCACGGG-TGAAGAGGTGTCTCGG 2797
Query 60 CCAAAAG 66
|||||||
Sbjct 2796 CCAAAAG 2790
Score = 82.4 bits (44), Expect = 3e-15
Identities = 48/50 (96%), Gaps = 0/50 (0%)
Strand=Plus/Minus
Query 186 CTCGACCGAACTGATGCGCATGCTACCTCCCGATCCAATGGTTCGATGGA 235
|||||||||||||||||||||||||||||||| ||||| |||||||||||
Sbjct 2503 CTCGACCGAACTGATGCGCATGCTACCTCCCGGTCCAACGGTTCGATGGA 2454
Score = 78.7 bits (42), Expect = 5e-14
Identities = 65/75 (87%), Gaps = 6/75 (8%)
Strand=Plus/Minus
Query 64 AAGCAACCATTCGCCCCCTATATAAGGGAGGACGTCCACAC-CATCTCACA--ATGCCCA 120
||||| |||||||||||||||||||||||||||| ||| | ||||||||| || | ||
Sbjct 2653 AAGCATCCATTCGCCCCCTATATAAGGGAGGACGCCCA-AGGCATCTCACATCAT-CTCA 2596
Query 121 CAACGATCCAAAACA 135
|||| ||||||||||
Sbjct 2595 CAAC-ATCCAAAACA 2582
> AT2G12505.1 | Symbols: | transposable element gene | chr2:5096038-5097359
FORWARD LENGTH=1035
Length=1035
Score = 100 bits (54), Expect = 1e-20
Identities = 63/67 (94%), Gaps = 2/67 (3%)
Strand=Plus/Minus
Query 1 GGTCAGCTGACACTCGAGCTGGTGGACTGTGGTAGCTCG-GGGATGAAGAGGTGTCTCGG 59
|||||||||||||||||||||||||||||||||||||| ||| |||| |||||||||||
Sbjct 967 GGTCAGCTGACACTCGAGCTGGTGGACTGTGGTAGCTCACGGG-TGAAAAGGTGTCTCGG 909
Query 60 CCAAAAG 66
|||||||
Sbjct 908 CCAAAAG 902
Score = 82.4 bits (44), Expect = 3e-15
Identities = 57/63 (90%), Gaps = 1/63 (2%)
Strand=Plus/Minus
Query 226 GTTCGATGGAATCACGAGGATAAGTGCAACCAAACACACCCAAGGGTCGCCCATGGATGC 285
|||||| |||| ||| | |||||||||| ||||||||||||||||||||||||||||||
Sbjct 426 GTTCGA-GGAAGCACAAAGATAAGTGCATCCAAACACACCCAAGGGTCGCCCATGGATGT 368
Query 286 AAT 288
|||
Sbjct 367 AAT 365
> AT3G31945.1 | Symbols: | transposable element gene | chr3:12942324-12949134
REVERSE LENGTH=6811
Length=6811
Score = 99.0 bits (53), Expect = 3e-20
Identities = 61/65 (94%), Gaps = 0/65 (0%)
Strand=Plus/Plus
Query 2 GTCAGCTGACACTCGAGCTGGTGGACTGTGGTAGCTCGGGGATGAAGAGGTGTCTCGGCC 61
||||||||||||||||||||||||||||||||||||| | |||||||||||||||| ||
Sbjct 2753 GTCAGCTGACACTCGAGCTGGTGGACTGTGGTAGCTCACGAATGAAGAGGTGTCTCGACC 2812
Query 62 AAAAG 66
|||||
Sbjct 2813 AAAAG 2817
Score = 76.8 bits (41), Expect = 2e-13
Identities = 47/50 (94%), Gaps = 0/50 (0%)
Strand=Plus/Plus
Query 186 CTCGACCGAACTGATGCGCATGCTACCTCCCGATCCAATGGTTCGATGGA 235
||| |||||||||||||||||||||||||||| ||||| |||||||||||
Sbjct 261 CTCAACCGAACTGATGCGCATGCTACCTCCCGGTCCAACGGTTCGATGGA 310
> AT4G08760.1 | Symbols: | BEST Arabidopsis thaliana protein match
is: nucleolin like 1 (TAIR:AT1G48920.1); Has 36 Blast hits
to 36 proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa
- 0; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes
- 0 (source: NCBI BLink). | chr4:5584739-5591133 REVERSE
LENGTH=1566
Length=1566
Score = 97.1 bits (52), Expect = 1e-19
Identities = 65/71 (92%), Gaps = 2/71 (3%)
Strand=Plus/Minus
Query 226 GTTCGATGGAATCACGAGGATAAGTGCAACCAAACACACCCAAGGGTCGCCCATGGATGC 285
|||||| |||| ||| |||||||||||| || ||||||||||||||||||||||||||||
Sbjct 1031 GTTCGA-GGAAGCACAAGGATAAGTGCATCCGAACACACCCAAGGGTCGCCCATGGATGC 973
Query 286 AATCT-CACCG 295
||||| |||||
Sbjct 972 AATCTTCACCG 962
> AT4G08109.1 | Symbols: | transposable element gene | chr4:5049024-5054252
REVERSE LENGTH=5229
Length=5229
Score = 67.6 bits (36), Expect = 1e-10
Identities = 63/75 (84%), Gaps = 6/75 (8%)
Strand=Plus/Plus
Query 64 AAGCAACCATTCGCCCCCTATATAAGGGAGGACGTCCACAC-CATCTCACA--ATGCCCA 120
||||| |||||||||||||||||||||||||||| ||| | ||||||| | || | ||
Sbjct 17 AAGCATCCATTCGCCCCCTATATAAGGGAGGACGCCCA-AGGCATCTCAGATCAT-CTCA 74
Query 121 CAACGATCCAAAACA 135
||| ||||||||||
Sbjct 75 GAAC-ATCCAAAACA 88
> AT1G54923.1 | Symbols: | transposable element gene | chr1:20475757-20476568
REVERSE LENGTH=405
Length=405
Score = 58.4 bits (31), Expect = 6e-08
Identities = 31/31 (100%), Gaps = 0/31 (0%)
Strand=Plus/Minus
Query 1 GGTCAGCTGACACTCGAGCTGGTGGACTGTG 31
|||||||||||||||||||||||||||||||
Sbjct 331 GGTCAGCTGACACTCGAGCTGGTGGACTGTG 301
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 21866470815
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5