BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg481538
Length=829
Score E
Sequences producing significant alignments: (Bits) Value
AT2G16832.1 | Symbols: | transposable element gene | chr2:7293... 444 7e-124
AT2G17460.1 | Symbols: | transposable element gene | chr2:7582... 444 7e-124
AT3G29777.1 | Symbols: | transposable element gene | chr3:1165... 438 3e-122
AT3G28800.1 | Symbols: | transposable element gene | chr3:1081... 429 2e-119
AT1G30980.1 | Symbols: | transposable element gene | chr1:1104... 427 7e-119
AT4G04495.1 | Symbols: | transposable element gene | chr4:2236... 425 3e-118
AT3G59860.1 | Symbols: | transposable element gene | chr3:2211... 416 2e-115
AT1G32505.1 | Symbols: | transposable element gene | chr1:1175... 327 8e-89
AT1G55400.1 | Symbols: | transposable element gene | chr1:2068... 302 5e-81
AT5G27590.1 | Symbols: | transposable element gene | chr5:9738... 296 2e-79
AT5G03950.1 | Symbols: | transposable element gene | chr5:1066... 296 2e-79
AT5G44313.1 | Symbols: | transposable element gene | chr5:1785... 296 2e-79
AT1G17900.1 | Symbols: | transposable element gene | chr1:6157... 285 5e-76
AT5G28637.1 | Symbols: | transposable element gene | chr5:1064... 248 6e-65
AT3G45120.1 | Symbols: | transposable element gene | chr3:1651... 187 1e-46
AT2G16820.1 | Symbols: | transposable element gene | chr2:7290... 169 5e-41
AT4G05583.2 | Symbols: | transposable element gene | chr4:2860... 124 1e-27
AT2G06600.1 | Symbols: | transposable element gene | chr2:2639... 86.1 5e-16
AT5G28487.1 | Symbols: | transposable element gene | chr5:1044... 80.5 2e-14
AT2G12150.1 | Symbols: | transposable element gene | chr2:4884... 80.5 2e-14
AT3G28110.1 | Symbols: | transposable element gene | chr3:1046... 75.0 1e-12
AT3G42626.1 | Symbols: | transposable element gene | chr3:1471... 75.0 1e-12
AT2G05490.1 | Symbols: | transposable element gene | chr2:2006... 75.0 1e-12
AT2G16150.1 | Symbols: | transposable element gene | chr2:7009... 75.0 1e-12
AT1G45070.1 | Symbols: | transposable element gene | chr1:1703... 75.0 1e-12
AT1G29075.1 | Symbols: | transposable element gene | chr1:1015... 65.8 6e-10
> AT2G16832.1 | Symbols: | transposable element gene | chr2:7293623-7294681
FORWARD LENGTH=1059
Length=1059
Score = 444 bits (240), Expect = 7e-124
Identities = 279/298 (94%), Gaps = 2/298 (1%)
Strand=Plus/Minus
Query 1 TCATACGATGTGATTTTGAAACATTCTGAATTCTTGACAACTTGAGCTGTCAAATGCCAT 60
|||||||||||||||||||||||||||||||||||||| || ||||| |||||||| |||
Sbjct 1046 TCATACGATGTGATTTTGAAACATTCTGAATTCTTGACGACATGAGCAGTCAAATGTCAT 987
Query 61 GGACAAGTATCATCAACGCAGACCATCTCCAATCTTTTAGGACATGACCTACGTTGCTTG 120
|||||||||||||||||||| |||||| |||||||| ||||| |||||||| ||||||||
Sbjct 986 GGACAAGTATCATCAACGCATACCATCACCAATCTTGTAGGATATGACCTAGGTTGCTTG 927
Query 121 TAGC-AAAAGCATTGTTTGATTGCGAGATAAGACATTATTTGTTGTATGACTTTTCTGTT 179
|||| ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 926 TAGCAAAAAG-ATTGTTTGATTGCGAGATAAGACATTGTTTGTTGTATGACTTTTCTGTT 868
Query 180 CTTAAAAACACTCTCCAATCTGTAGTGTACGTACATTGGTACAAACCATGTTGACACGTA 239
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct 867 CTTAAAAACACTCTCCAATCTATAGTGTACGTACATTGGTACAAACCATGTTGACACATA 808
Query 240 CGTCTTGGAGTCACCGTTGGTGTACGGTCACCCGAATGAGAAATGTTATCTCCGCCAG 297
| |||||||||||| | ||||||||||||||||| ||||||||||||||||||||||
Sbjct 807 CTTCTTGGAGTCACAGCTGGTGTACGGTCACCCGGGTGAGAAATGTTATCTCCGCCAG 750
Score = 267 bits (144), Expect = 2e-70
Identities = 321/398 (81%), Gaps = 45/398 (11%)
Strand=Plus/Minus
Query 470 GATCGAGGGTACTTCCCCCCATAGATCCATCATCACCCTGATAATCATCATACCCAGCAC 529
|||||| ||||||| |||||||||||||||| |||| ||||||||||||||||||| |||
Sbjct 564 GATCGATGGTACTT-CCCCCATAGATCCATCGTCACACTGATAATCATCATACCCATCAC 506
Query 530 CATCTTCGTTTTCCTCCTCCTCTTCTTCATCCTCATCTGTTTTATCGTCTTCAACGTCGT 589
|||||||||| | | || || | |||||||||||||||||||||||||||||| |||||
Sbjct 505 CATCTTCGTTGT-C-CC-CC-CAACTTCATCCTCATCTGTTTTATCGTCTTCAATGTCGT 450
Query 590 CTTGCTCATCTACGGCCTCATTATTTCCATCTACATTTGAAGCACTCCCACACACACGGT 649
|||||| ||||||||||||||||||| |||| |||||| || |||| ||||||||||||
Sbjct 449 CTTGCTAATCTACGGCCTCATTATTTTCATCAACATTTAAAACACTATCACACACACGGT 390
Query 650 -A-----A-C-TC-TCACCATCG-GTCCTAGGGACAGTATTCCCGAGTG-C----C--TT 692
| | | || ||||||| | ||||||| |||| |||||||||||| | | ||
Sbjct 389 CACTTTCAGCATCGTCACCAT-GAGTCCTAGAGACATTATTCCCGAGTGTCTTGACGGTT 331
Query 693 G-AA--A--GAGACAAACAAGGTGACACTAGGATCCCCACCACGAATCAAAAA--TC--A 743
| || | ||||||||||| ||| | ||||| |||||||||||| ||||| || |
Sbjct 330 GTAATGAAAGAGACAAACAAATTGAGAGAAGGATACCCACCACGAATAAAAAAAATCGTA 271
Query 744 T-------T---T-GATTGTCAATGTATACAGGAGGGCGTTTACTTTCTATCATCACTGA 792
| | | || |||||||||| ||||||||||||||| | |||||||||||| |
Sbjct 270 TCCCACCCTCACTTGACTGTCAATGTAGACAGGAGGGCGTTTAGTATCTATCATCACTAA 211
Query 793 CATCTTTCCCGGCATCCAGTAACTAATTATTG-GATTG 829
||||| |||||| ||||| ||||||||||| | |||||
Sbjct 210 CATCTCTCCCGGTATCCATTAACTAATTAT-GAGATTG 174
Score = 102 bits (55), Expect = 5e-21
Identities = 94/111 (85%), Gaps = 9/111 (8%)
Strand=Plus/Minus
Query 369 GTGTACGTACATTGGTACAAACCATGTTGACACGTACGTCTTGGAGTCACCGTTGGTGTA 428
||||||||||||||||||||||||||||||||| ||| |||||||||||| | |||||||
Sbjct 843 GTGTACGTACATTGGTACAAACCATGTTGACACATACTTCTTGGAGTCACAGCTGGTGTA 784
Query 429 CGGTCAACCG----AG---T-T-ATCTCCCCCACGTACACGATGACTTGTG 470
|||||| ||| || | | |||||| ||| ||||||| |||||||||
Sbjct 783 CGGTCACCCGGGTGAGAAATGTTATCTCCGCCAGGTACACGTTGACTTGTG 733
> AT2G17460.1 | Symbols: | transposable element gene | chr2:7582174-7583230
FORWARD LENGTH=1057
Length=1057
Score = 444 bits (240), Expect = 7e-124
Identities = 279/298 (94%), Gaps = 2/298 (1%)
Strand=Plus/Minus
Query 1 TCATACGATGTGATTTTGAAACATTCTGAATTCTTGACAACTTGAGCTGTCAAATGCCAT 60
||||||||||||||||||||| |||||||||||||||| |||||||| |||||||| |||
Sbjct 1044 TCATACGATGTGATTTTGAAATATTCTGAATTCTTGACGACTTGAGCAGTCAAATGTCAT 985
Query 61 GGACAAGTATCATCAACGCAGACCATCTCCAATCTTTTAGGACATGACCTACGTTGCTTG 120
|||||||||||||||||||| |||||| |||||||| ||||| |||||||| ||||||||
Sbjct 984 GGACAAGTATCATCAACGCATACCATCACCAATCTTGTAGGATATGACCTAGGTTGCTTG 925
Query 121 TAGC-AAAAGCATTGTTTGATTGCGAGATAAGACATTATTTGTTGTATGACTTTTCTGTT 179
|||| ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 924 TAGCAAAAAG-ATTGTTTGATTGCGAGATAAGACATTGTTTGTTGTATGACTTTTCTGTT 866
Query 180 CTTAAAAACACTCTCCAATCTGTAGTGTACGTACATTGGTACAAACCATGTTGACACGTA 239
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct 865 CTTAAAAACACTCTCCAATCTATAGTGTACGTACATTGGTACAAACCATGTTGACACATA 806
Query 240 CGTCTTGGAGTCACCGTTGGTGTACGGTCACCCGAATGAGAAATGTTATCTCCGCCAG 297
| |||||||||||| | ||||||||||||||||| ||||||||||||||||||||||
Sbjct 805 CTTCTTGGAGTCACAGCTGGTGTACGGTCACCCGGGTGAGAAATGTTATCTCCGCCAG 748
Score = 272 bits (147), Expect = 4e-72
Identities = 322/398 (81%), Gaps = 46/398 (12%)
Strand=Plus/Minus
Query 470 GATCGAGGGTACTTCCCCCCATAGATCCATCATCACCCTGATAATCATCATACCCAGCAC 529
|||||| ||||||| |||||||||||||||| |||||||||||||||||||||||| |||
Sbjct 561 GATCGATGGTACTT-CCCCCATAGATCCATCGTCACCCTGATAATCATCATACCCATCAC 503
Query 530 CATCTTCGTTTTCCTCCTCCTCTTCTTCATCCTCATCTGTTTTATCGTCTTCAA-CGTCG 588
|||||||||| | | || || | ||||||||||||||||||||||||||||||| | |||
Sbjct 502 CATCTTCGTTGT-C-CC-CC-CATCTTCATCCTCATCTGTTTTATCGTCTTCAATC-TCG 448
Query 589 TCTTGCTCATCTACGGCCTCATTATTTCCATCTACATTTGAAGCACTCCCACACACACGG 648
|||| || ||||| ||||||||||||| |||| |||||| || |||| |||||||||||
Sbjct 447 TCTTACTAATCTATGGCCTCATTATTTTCATCAACATTTAAAACACTATCACACACACGG 388
Query 649 T-A-----A-C-TC-TCACCATCG-GTCCTAGGGACAGTATTCCCGAGTG-C----C--T 691
| | | | || ||||||| | ||||||| |||| |||||||||||| | | |
Sbjct 387 TCACTTTCAGCATCGTCACCAT-GAGTCCTAGAGACATTATTCCCGAGTGTCTTGACGGT 329
Query 692 TG-AA--A--GAGACAAACAAGGTGACACTAGGATCCCCACCACGAATCAAAAA--TC-- 742
|| || | |||||||||||| ||| | ||||| |||||||||||| ||||| ||
Sbjct 328 TGTAATGAAAGAGACAAACAAGTTGAGAGAAGGATACCCACCACGAATAAAAAAAATCGT 269
Query 743 AT-------T---T-GATTGTCAATGTATACAGGAGGGCGTTTACTTTCTATCATCACTG 791
|| | | || |||||||||| ||||||||||||||| | ||||||||||||
Sbjct 268 ATCCCACCCTCACTTGACTGTCAATGTAGACAGGAGGGCGTTTAGTATCTATCATCACTA 209
Query 792 ACATCTTTCCCGGCATCCAGTAACTAATTATTGGATTG 829
|||||| ||||| ||||||||||||||||| ||||||
Sbjct 208 ACATCTCTCCCGT-ATCCAGTAACTAATTATGGGATTG 172
Score = 102 bits (55), Expect = 5e-21
Identities = 94/111 (85%), Gaps = 9/111 (8%)
Strand=Plus/Minus
Query 369 GTGTACGTACATTGGTACAAACCATGTTGACACGTACGTCTTGGAGTCACCGTTGGTGTA 428
||||||||||||||||||||||||||||||||| ||| |||||||||||| | |||||||
Sbjct 841 GTGTACGTACATTGGTACAAACCATGTTGACACATACTTCTTGGAGTCACAGCTGGTGTA 782
Query 429 CGGTCAACCG----AG---T-T-ATCTCCCCCACGTACACGATGACTTGTG 470
|||||| ||| || | | |||||| ||| ||||||| |||||||||
Sbjct 781 CGGTCACCCGGGTGAGAAATGTTATCTCCGCCAGGTACACGCTGACTTGTG 731
> AT3G29777.1 | Symbols: | transposable element gene | chr3:11658757-11659845
REVERSE LENGTH=1089
Length=1089
Score = 438 bits (237), Expect = 3e-122
Identities = 278/298 (93%), Gaps = 2/298 (1%)
Strand=Plus/Minus
Query 1 TCATACGATGTGATTTTGAAACATTCTGAATTCTTGACAACTTGAGCTGTCAAATGCCAT 60
||||||||||||||||||||| |||||||||||||||| |||||||| |||||||| |||
Sbjct 1046 TCATACGATGTGATTTTGAAATATTCTGAATTCTTGACGACTTGAGCAGTCAAATGTCAT 987
Query 61 GGACAAGTATCATCAACGCAGACCATCTCCAATCTTTTAGGACATGACCTACGTTGCTTG 120
|||||||||||||||||||| |||||| |||||||| ||||| |||||||| ||||||||
Sbjct 986 GGACAAGTATCATCAACGCATACCATCACCAATCTTGTAGGATATGACCTAGGTTGCTTG 927
Query 121 TAGC-AAAAGCATTGTTTGATTGCGAGATAAGACATTATTTGTTGTATGACTTTTCTGTT 179
|||| ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 926 TAGCAAAAAG-ATTGTTTGATTGCGAGATAAGACATTGTTTGTTGTATGACTTTTCTGTT 868
Query 180 CTTAAAAACACTCTCCAATCTGTAGTGTACGTACATTGGTACAAACCATGTTGACACGTA 239
|||||||||||||| |||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct 867 CTTAAAAACACTCTTCAATCTATAGTGTACGTACATTGGTACAAACCATGTTGACACATA 808
Query 240 CGTCTTGGAGTCACCGTTGGTGTACGGTCACCCGAATGAGAAATGTTATCTCCGCCAG 297
| |||||||||||| | ||||||||||||||||| ||||||||||||||||||||||
Sbjct 807 CTTCTTGGAGTCACAGCTGGTGTACGGTCACCCGGGTGAGAAATGTTATCTCCGCCAG 750
Score = 272 bits (147), Expect = 4e-72
Identities = 321/397 (81%), Gaps = 43/397 (11%)
Strand=Plus/Minus
Query 470 GATCGAGGGTACTTCCCCCCATAGATCCATCATCACCCTGATAATCATCATACCCAGCAC 529
|||||| ||||||| |||||||||||||||| |||||||||||||||||||||||| |||
Sbjct 564 GATCGATGGTACTT-CCCCCATAGATCCATCGTCACCCTGATAATCATCATACCCATCAC 506
Query 530 CATCTTCGTTTTCCTCCTCCTCTTCTTCATCCTCATCTGTTTTATCGTCTTCAA-CGTCG 588
|||||||||| | | || || | ||||||||||||||||||||||||||||||| | |||
Sbjct 505 CATCTTCGTTGT-C-CC-CC-CATCTTCATCCTCATCTGTTTTATCGTCTTCAATC-TCG 451
Query 589 TCTTGCTCATCTACGGCCTCATTATTTCCATCTACATTTGAAGCACTCCCACACACACGG 648
||||||| ||||| ||||||||||||| |||| |||||| || |||| |||||||||||
Sbjct 450 TCTTGCTAATCTATGGCCTCATTATTTTCATCAACATTTAAAACACTATCACACACACGG 391
Query 649 TAACTCTCACCATCG-------G--TCCTAGGGACAGTATTCCCGAGTG-C----C--TT 692
| ||| ||| ||||| | |||||| |||| |||||||||||| | | ||
Sbjct 390 TCACTTTCAGCATCGTCACCATGACTCCTAGAGACATTATTCCCGAGTGTCTTGACGGTT 331
Query 693 G-AA--A--GAGACAAACAAGGTGACACTAGGATCCCCACCACGAATCAAAAA--TCAT- 744
| || | |||||||||||| ||| | ||||| |||||||||||| ||||| || |
Sbjct 330 GTAATGAAAGAGACAAACAAGTTGAGAGAAGGATACCCACCACGAATAAAAAAAATCGTA 271
Query 745 T-------TGA-TTG--TC--AATGTATACAGGAGGGCGTTTACTTTCTATCATCACTGA 792
| | | ||| || |||||| ||||||||||||||| | |||||||||||| |
Sbjct 270 TCCCACCCTCACTTGACTCTCAATGTAGACAGGAGGGCGTTTAGTATCTATCATCACTAA 211
Query 793 CATCTTTCCCGGCATCCAGTAACTAATTATTGGATTG 829
||||| |||||| ||||||||||||||||| ||||||
Sbjct 210 CATCTCTCCCGGTATCCAGTAACTAATTATGGGATTG 174
Score = 102 bits (55), Expect = 5e-21
Identities = 65/70 (93%), Gaps = 0/70 (0%)
Strand=Plus/Minus
Query 369 GTGTACGTACATTGGTACAAACCATGTTGACACGTACGTCTTGGAGTCACCGTTGGTGTA 428
||||||||||||||||||||||||||||||||| ||| |||||||||||| | |||||||
Sbjct 843 GTGTACGTACATTGGTACAAACCATGTTGACACATACTTCTTGGAGTCACAGCTGGTGTA 784
Query 429 CGGTCAACCG 438
|||||| |||
Sbjct 783 CGGTCACCCG 774
> AT3G28800.1 | Symbols: | transposable element gene | chr3:10817053-10818113
REVERSE LENGTH=1061
Length=1061
Score = 429 bits (232), Expect = 2e-119
Identities = 276/297 (93%), Gaps = 4/297 (1%)
Strand=Plus/Minus
Query 3 ATACGATGTGATTTTGAAACATTCTGAATTCTTGACAACTTGAGCTGTCAAATGCCATGG 62
|||||||||||||||||||||||||||||||||||| |||||||| |||||||| |||||
Sbjct 1046 ATACGATGTGATTTTGAAACATTCTGAATTCTTGACGACTTGAGCAGTCAAATGTCATGG 987
Query 63 ACAAGTATCATCAACGCAGACCATCTCCAATCTTTTAGGACATGACCTACGTTGCTTGTA 122
|||||||||||||||||| ||||||||||||||| |||||||||| ||| ||||||||||
Sbjct 986 ACAAGTATCATCAACGCATACCATCTCCAATCTTATAGGACATGATCTAGGTTGCTTGTA 927
Query 123 GCAAAA-GCATTGTTTGATTGCGAGATAAGACATTATTTGTTGTATGACTTTTCTGTTCT 181
|||||| | |||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 926 GCAAAAAG-ATTGTTTGATTGCGAGATAAGACATTGTTTGTTGTATGACTTTTCTGTTCT 868
Query 182 TAAAAACACTCTCCAATCTGTAGTGTACGTACATTGGTACAAACCATGTTGACACGTACG 241
|||||||||| |||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct 867 TAAAAACACTTTCCAATCTATAGTGTACGTACATTGGTACAAACCATGTTGACACATACT 808
Query 242 TCTTGGAGTCACCGTTGGTGTACGGTCACCCGAA-TGAGAAATGTTATCTCCGCCAG 297
|||||||||||| | |||||||||||||||| || ||| ||| |||||||||| |||
Sbjct 807 TCTTGGAGTCACAGCTGGTGTACGGTCACCC-AAGTGAAAAAAGTTATCTCCGTCAG 752
Score = 279 bits (151), Expect = 2e-74
Identities = 324/399 (81%), Gaps = 46/399 (12%)
Strand=Plus/Minus
Query 470 GATCGAGGGTACTTCCCCCCATAGATCCATCATCACCCTGATAATCATCATACCCAGCAC 529
||||||||||||||||| ||||||||||||| |||||||||||||||||||||||| |||
Sbjct 565 GATCGAGGGTACTTCCCTCCATAGATCCATCGTCACCCTGATAATCATCATACCCATCAC 506
Query 530 CATCTTCGTT-TTCCTCCTCCTCTTCTTCATCCTCATCTGTTTTATCGTCTTCAACGTCG 588
||||||||| |||| ||| | ||| ||||||||||||||||||||||||||||||||||
Sbjct 505 TATCTTCGTTGTTCC-CCT-C-CTT-TTCATCCTCATCTGTTTTATCGTCTTCAACGTCG 450
Query 589 TCTTGCTCATCTACGGCCTCATTATTTCCATCTACATTTGAAGCACTCCCACACACACGG 648
||||||||||||||||||||||||||| |||| ||||||||| || | |||||||||||
Sbjct 449 TCTTGCTCATCTACGGCCTCATTATTTTCATCAACATTTGAAACATTATCACACACACGG 390
Query 649 T-A-----A-C-TC-TCACCATCG-GTCCTAGGGACAGT-ATTCCCGAGTGCCTTGA--- 694
| | | | || ||||||| | ||||||| || | | ||||||||||| |||||
Sbjct 389 TCACTTTCAGCATCGTCACCAT-GAGTCCTAGAGATA-TCATTCCCGAGTGTCTTGACGG 332
Query 695 ----AA-GA----GACAAACAAGGTGACACTAGGATCCCCACCACGAATCAAAAAT--C- 742
|| || |||||||||| ||| | ||||| || ||||||||||||||| |
Sbjct 331 TTGTAATGAAAAAGACAAACAAGTTGAGAGAAGGATACCGACCACGAATCAAAAAGAACG 272
Query 743 -AT----------TTGATTGTCAATGTATACAGGAGGGCGTTTACTTTCTATCATCACTG 791
|| |||| |||||||||| | ||||||||||||| | ||||| ||||||
Sbjct 271 TATCCAACCCCACTTGACTGTCAATGTAGATAGGAGGGCGTTTAGTATCTATAATCACTA 212
Query 792 ACATCTTTCCCGGCATCCAGTAACTAATTAT-TGGATTG 829
|||||||||||| |||| ||||||||||||| || ||||
Sbjct 211 ACATCTTTCCCGACATCGAGTAACTAATTATGTG-ATTG 174
Score = 102 bits (55), Expect = 5e-21
Identities = 67/73 (92%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 369 GTGTACGTACATTGGTACAAACCATGTTGACACGTACGTCTTGGAGTCACCGTTGGTGTA 428
||||||||||||||||||||||||||||||||| ||| |||||||||||| | |||||||
Sbjct 845 GTGTACGTACATTGGTACAAACCATGTTGACACATACTTCTTGGAGTCACAGCTGGTGTA 786
Query 429 CGGTCAACCGAGT 441
|||||| || |||
Sbjct 785 CGGTCACCCAAGT 773
> AT1G30980.1 | Symbols: | transposable element gene | chr1:11049583-11050729
REVERSE LENGTH=1147
Length=1147
Score = 427 bits (231), Expect = 7e-119
Identities = 277/299 (93%), Gaps = 4/299 (1%)
Strand=Plus/Minus
Query 1 TCATACGATGTGATTTTGAAACATTCTGAATTCTTGACAACTTGAGCTGTCAAATGCCAT 60
||||||||||||||||||||| ||||| |||||||||| |||||||| |||||||| |||
Sbjct 1106 TCATACGATGTGATTTTGAAATATTCTTAATTCTTGACGACTTGAGCAGTCAAATGTCAT 1047
Query 61 GGACAAGTATCATCAACGCAGACCATCTCCAATCTTTTAGGACATGACCTACGTTGCTTG 120
|||||||||||||||||||| |||||| |||||||| ||||| |||||||| ||||||||
Sbjct 1046 GGACAAGTATCATCAACGCATACCATCACCAATCTTGTAGGATATGACCTAGGTTGCTTG 987
Query 121 TAGC-AAAAGCATTGTTTGATTGCGAGATAAGACATTATTTGTTGTATGACTTTTCTGTT 179
|||| ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 986 TAGCAAAAAG-ATTGTTTGATTGCGAGATAAGACATTGTTTGTTGTATGACTTTTCTGTT 928
Query 180 CTTAAAAACACTCTCCAATCTGTAGTGTACGTACATTGGTACAAACCATGTTGACACGTA 239
||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| ||
Sbjct 927 CTTAAAAACACTCTCCAATTTATAGTGTACGTACATTGGTACAAACCATGTTGACACATA 868
Query 240 CGT-CTTGGAGTCACCGTTGGTGTACGGTCACCCGAATGAGAAATGTTATCTCCGCCAG 297
|| ||||||||||| | ||||||||||||||||| ||||||||||||||||||||||
Sbjct 867 -GTTCTTGGAGTCACAGCTGGTGTACGGTCACCCGGGTGAGAAATGTTATCTCCGCCAG 810
Score = 281 bits (152), Expect = 6e-75
Identities = 322/397 (81%), Gaps = 39/397 (10%)
Strand=Plus/Minus
Query 470 GATCGAGGGTACTTCCCCCCATAGATCCATCATCACCCTGATAATCATCATACCCAGCAC 529
|||||| ||||||| ||| |||||||||||| |||||||||||||||||||||||| |||
Sbjct 623 GATCGATGGTACTT-CCCTCATAGATCCATCGTCACCCTGATAATCATCATACCCATCAC 565
Query 530 CATCTTCGTTTTCCTCCTCCTCTTCTTCATCCTCATCTGTTTTATCGTCTTCAACGTCGT 589
|||||||||| ||| || || | ||||||||||||||||||||||||||||||| |||||
Sbjct 564 CATCTTCGTTGTCCCCCCCCCCATCTTCATCCTCATCTGTTTTATCGTCTTCAATGTCGT 505
Query 590 CTTGCTCATCTACGGCCTCATTATTTCCATCTACATTTGAAGCACTCCCACACACACGGT 649
||| || ||||||||||||||||||| |||| |||||| || |||| ||||||||||||
Sbjct 504 CTTCCTAATCTACGGCCTCATTATTTTCATCAACATTTAAAACACTATCACACACACGGT 445
Query 650 -A-----A-C-TC-TCACCATCG-GTCCTAGGGACAGTATTCCCGAGTG-C----C--TT 692
| | | || ||||||| | ||||||| |||| |||||| ||||| | | ||
Sbjct 444 CACTTTCAGCATCGTCACCAT-GAGTCCTAGAGACATTATTCCTGAGTGTCTTGACAGTT 386
Query 693 G-AA--A--GAGACAAACAAGGTGACACTAGGATCCCCACCACGAATCAAAAA--T---- 741
| || | |||||||||||| ||| | ||||| |||||||||||| ||||| |
Sbjct 385 GTAATGATAGAGACAAACAAGTTGAGAGAAGGATACCCACCACGAATAAAAAAAATTGTA 326
Query 742 -C--A---T---TTGATTGTCAATGTATACAGGAGGGCGTTTACTTTCTATCATCACTGA 792
| | | |||| |||||||||| ||||||||||||||| | |||||||||||| |
Sbjct 325 TCCCACCCTCACTTGACTGTCAATGTAGACAGGAGGGCGTTTAGTATCTATCATCACTAA 266
Query 793 CATCTTTCCCGGCATCCAGTAACTAATTATTGGATTG 829
||||| || ||| ||||||||||||||||| ||||||
Sbjct 265 CATCTCTCTCGGTATCCAGTAACTAATTATGGGATTG 229
Score = 97.1 bits (52), Expect = 2e-19
Identities = 94/112 (84%), Gaps = 11/112 (10%)
Strand=Plus/Minus
Query 369 GTGTACGTACATTGGTACAAACCATGTTGACACGTACGT-CTTGGAGTCACCGTTGGTGT 427
||||||||||||||||||||||||||||||||| || || ||||||||||| | ||||||
Sbjct 903 GTGTACGTACATTGGTACAAACCATGTTGACACATA-GTTCTTGGAGTCACAGCTGGTGT 845
Query 428 ACGGTCAACCG----AG---T-T-ATCTCCCCCACGTACACGATGACTTGTG 470
||||||| ||| || | | |||||| ||| ||||||| |||||||||
Sbjct 844 ACGGTCACCCGGGTGAGAAATGTTATCTCCGCCAGGTACACGCTGACTTGTG 793
> AT4G04495.1 | Symbols: | transposable element gene | chr4:2236004-2237046
REVERSE LENGTH=1043
Length=1043
Score = 425 bits (230), Expect = 3e-118
Identities = 271/291 (93%), Gaps = 2/291 (1%)
Strand=Plus/Minus
Query 1 TCATACGATGTGATTTTGAAACATTCTGAATTCTTGACAACTTGAGCTGTCAAATGCCAT 60
||||||||||||||||||||||||||||||||| |||| |||||||| |||||||| |||
Sbjct 1030 TCATACGATGTGATTTTGAAACATTCTGAATTCCTGACGACTTGAGCAGTCAAATGTCAT 971
Query 61 GGACAAGTATCATCAACGCAGACCATCTCCAATCTTTTAGGACATGACCTACGTTGCTTG 120
||||| |||||||||||||| || |||||||||||| |||||||||||||| |||||||
Sbjct 970 GGACAGGTATCATCAACGCATACTATCTCCAATCTTGTAGGACATGACCTAGGTTGCTTA 911
Query 121 TAGCAAAAGCATTGTTTGATTGCGAGATAAGACATTATTTGTTGTATGACTTTTCTGTTC 180
|||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 910 TAGCAAAAACATTGTTTGATTGCGAGATAAGACATTGTTTGTTGTATGACTTTTCTGTTC 851
Query 181 TTAAAAACACT-CTCCAATCTGTAGTGTACGTACATTGGTACAAACCATGTTGACACGTA 239
||||||| ||| || |||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 850 TTAAAAATACTCCT-CAATCTATAGTGTACGTACATTGGTACAAACCATGTTGACACGTA 792
Query 240 CGTCTTGGAGTCACCGTTGGTGTACGGTCACCCGAATGAGAAATGTTATCT 290
| |||||||||||| | |||||||||||||||||| |||||||||||||||
Sbjct 791 CTTCTTGGAGTCACAGCTGGTGTACGGTCACCCGAGTGAGAAATGTTATCT 741
Score = 113 bits (61), Expect = 2e-24
Identities = 69/73 (95%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 369 GTGTACGTACATTGGTACAAACCATGTTGACACGTACGTCTTGGAGTCACCGTTGGTGTA 428
||||||||||||||||||||||||||||||||||||| |||||||||||| | |||||||
Sbjct 827 GTGTACGTACATTGGTACAAACCATGTTGACACGTACTTCTTGGAGTCACAGCTGGTGTA 768
Query 429 CGGTCAACCGAGT 441
|||||| ||||||
Sbjct 767 CGGTCACCCGAGT 755
> AT3G59860.1 | Symbols: | transposable element gene | chr3:22113851-22114908
REVERSE LENGTH=1058
Length=1058
Score = 416 bits (225), Expect = 2e-115
Identities = 273/297 (92%), Gaps = 0/297 (0%)
Strand=Plus/Minus
Query 1 TCATACGATGTGATTTTGAAACATTCTGAATTCTTGACAACTTGAGCTGTCAAATGCCAT 60
|||||||||||||||||||||||||||||||||||||| |||||||| |||||||| |||
Sbjct 1045 TCATACGATGTGATTTTGAAACATTCTGAATTCTTGACGACTTGAGCAGTCAAATGTCAT 986
Query 61 GGACAAGTATCATCAACGCAGACCATCTCCAATCTTTTAGGACATGACCTACGTTGCTTG 120
||||||||||||||||||| | |||| |||||||| ||||| |||||||| |||||||
Sbjct 985 AGACAAGTATCATCAACGCATATCATCACCAATCTTGTAGGATATGACCTAGGTTGCTTA 926
Query 121 TAGCAAAAGCATTGTTTGATTGCGAGATAAGACATTATTTGTTGTATGACTTTTCTGTTC 180
|||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 925 TAGCAAAAAAATTGTTTGATTGCGAGATAAGACATTGTTTGTTGTATGACTTTTCTGTTC 866
Query 181 TTAAAAACACTCTCCAATCTGTAGTGTACGTACATTGGTACAAACCATGTTGACACGTAC 240
|||||||||||||||||||| || ||||||||||||||||||||||||||||||| |||
Sbjct 865 TTAAAAACACTCTCCAATCTATATTGTACGTACATTGGTACAAACCATGTTGACAAATAC 806
Query 241 GTCTTGGAGTCACCGTTGGTGTACGGTCACCCGAATGAGAAATGTTATCTCCGCCAG 297
|||||||||||| ||||||||||||||||| ||||||||||||||||||||||
Sbjct 805 TTCTTGGAGTCACAACTGGTGTACGGTCACCCGGGTGAGAAATGTTATCTCCGCCAG 749
Score = 243 bits (131), Expect = 3e-63
Identities = 316/397 (80%), Gaps = 45/397 (11%)
Strand=Plus/Minus
Query 470 GATCGAGGGTACTTCCCCCCATAGATCCATCATCACCCTGATAATCATCATACCCAGCAC 529
|||||| ||||||| |||||||||||||||| |||||||||||||||||||||||| |||
Sbjct 562 GATCGATGGTACTT-CCCCCATAGATCCATCGTCACCCTGATAATCATCATACCCATCAC 504
Query 530 CATCTTCGTTTTCCTCCTCCTCTTCTTCATCCTCATCTGTTTTATCGTCTTCAACGTCGT 589
|||||||| || |||| ||| ||||||||||||||||||||||||||||||| |||||
Sbjct 503 CATCTTCG--TT-GTCCT-CTCATCTTCATCCTCATCTGTTTTATCGTCTTCAATGTCGT 448
Query 590 CTTGCTCATCTACGGCCTCATTATTTCCATCTACATTTGAAGCACTCCCACACACACGGT 649
|||||| |||||||| |||||||||| |||| ||||| || |||| ||||||||| ||
Sbjct 447 CTTGCTAATCTACGGTCTCATTATTTTCATCAACATTAAAA-CACTATCACACACACAGT 389
Query 650 -A-----A-C-TC-TCACCATCG-GTCCTAGGGACAGTATTCCCGAGTGC-----C--TT 692
| | | || ||||||| | ||||||| |||| |||| ||||||| | ||
Sbjct 388 CACTTTCAGCATCGTCACCAT-GAGTCCTAGAGACATTATTTCCGAGTGTATTGACGGTT 330
Query 693 G-AA--A--GAGACAAACAAGGTGACACTAGGATCCCCACCACGAATCAAAAA--TC--A 743
| || | |||||||||||| ||| | ||||| |||||||||||| ||||| || |
Sbjct 329 GTAATGAAAGAGACAAACAAGTTGAGAGAAGGATACCCACCACGAATAAAAAAAATCGTA 270
Query 744 T-------T---T-GATTGTCAATGTATACAGGAGGGCGTTTACTTTCTATCATCACTGA 792
| | | || |||||||||| ||||||||||||||| | |||| ||| ||| |
Sbjct 269 TCCCACCCTCACTTGACTGTCAATGTAGACAGGAGGGCGTTTAGTATCTA-CATAACTAA 211
Query 793 CATCTTTCCCGGCATCCAGTAACTAATTATTGGATTG 829
|||| |||||| |||||||||||||| || ||||||
Sbjct 210 CATCACTCCCGGTATCCAGTAACTAATCATGGGATTG 174
Score = 89.8 bits (48), Expect = 4e-17
Identities = 62/69 (90%), Gaps = 0/69 (0%)
Strand=Plus/Minus
Query 370 TGTACGTACATTGGTACAAACCATGTTGACACGTACGTCTTGGAGTCACCGTTGGTGTAC 429
||||||||||||||||||||||||||||||| ||| |||||||||||| ||||||||
Sbjct 841 TGTACGTACATTGGTACAAACCATGTTGACAAATACTTCTTGGAGTCACAACTGGTGTAC 782
Query 430 GGTCAACCG 438
||||| |||
Sbjct 781 GGTCACCCG 773
> AT1G32505.1 | Symbols: | transposable element gene | chr1:11753254-11754123
FORWARD LENGTH=870
Length=870
Score = 327 bits (177), Expect = 8e-89
Identities = 320/384 (83%), Gaps = 30/384 (8%)
Strand=Plus/Minus
Query 470 GATCGAGGGTACTTCCCCCCATAGATCCATCATCACCCTGATAATCATCATACCCAGCAC 529
|||||||||||||| |||||||||||||||| |||||||||||||||||||||||| |||
Sbjct 440 GATCGAGGGTACTTTCCCCCATAGATCCATCGTCACCCTGATAATCATCATACCCATCAC 381
Query 530 CATCTTCGTTTTCCTCCTCCTCTTCTTCATCCTCATCTGTTTTATCGTCTTCAACGTCGT 589
|||||| ||| | | || |||| |||||||||||||||||||||||||||||||||||||
Sbjct 380 CATCTTTGTTGT-C-CC-CCTCCTCTTCATCCTCATCTGTTTTATCGTCTTCAACGTCGT 324
Query 590 CTTGCTCATCTACGGCCTCATTATTTCCATCTACATTTGAAGCACTCCCACACACACGGT 649
||||||||||||||| |||||||||| |||| ||||||||| |||| ||||||||||||
Sbjct 323 CTTGCTCATCTACGGTCTCATTATTTTCATCAACATTTGAAACACTATCACACACACGGT 264
Query 650 -A-----A-C-TC-TCACCATCG-GTCCTAGGGACAGTATTCCCGAGTGCCTTGAAAGAG 699
| | | || ||||||| | |||||| |||| |||||||||||| ||||| | |
Sbjct 263 CACTTTCAGCATCGTCACCAT-GAGTCCTAAAGACATTATTCCCGAGTGTCTTGAC-G-G 207
Query 700 ACAAACAAGGTGACACTAGGATCCCCACCACGAATCAAAAAT--C--AT----------T 745
||||||||| ||| | ||||| || ||||||||||||||| | || |
Sbjct 206 ACAAACAAGTTGAGAGAAGGATACCGACCACGAATCAAAAAGAACGTATCCAACCCCACT 147
Query 746 TGATTGTCAATGTATACAGGAGGGCGTTTACTTTCTATCATCACTGACATCTTTCCCGGC 805
||| |||||||||| |||||| | |||||| | |||||||||||| |||||| ||| |||
Sbjct 146 TGACTGTCAATGTAGACAGGAAGACGTTTAGTATCTATCATCACTAACATCTCTCCTGGC 87
Query 806 ATCCAGTAACTAATTATTGGATTG 829
||||||||||||||||| ||||||
Sbjct 86 ATCCAGTAACTAATTATGGGATTG 63
> AT1G55400.1 | Symbols: | transposable element gene | chr1:20684233-20684965
REVERSE LENGTH=733
Length=733
Score = 302 bits (163), Expect = 5e-81
Identities = 318/387 (82%), Gaps = 34/387 (9%)
Strand=Plus/Minus
Query 470 GATCGAGGGTACTTCCCCCCATAGATCCATCATCACCCTGATAATCATCATACCCAGCAC 529
||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||
Sbjct 553 GATCGAGGGTACTTCCCCCCATAGATCCATCGTCACCCTGATAATCATCATACCCATCAC 494
Query 530 CATCTTCGTTTTCCTCCTCCTCTTCTTCATCCTCATCTGTTTTATCGTCTTCAACGTCGT 589
|||||||||| | | || |||| |||||||||||||||||||||||||||||||| ||||
Sbjct 493 CATCTTCGTTGT-C-CC-CCTCCTCTTCATCCTCATCTGTTTTATCGTCTTCAACATCGT 437
Query 590 CTTGCTCATCTACGGCCTCATTATTTCCATCTACATTTGAAGCACTCCCACACACACGGT 649
|||||||||||||||||||||||||| |||| ||||||||| ||| ||| || |
Sbjct 436 CTTGCTCATCTACGGCCTCATTATTTTCATCAACATTTGAAACACGGTCACTTTCA-GC- 379
Query 650 AACTCTCACCATCG-GTCCTAGGGACAGTATTCCCGAGTG-C----C--TTG-AA--A-- 696
| | ||||||| | ||||||| |||| ||||| |||||| | | ||| || |
Sbjct 378 ATCG-TCACCAT-GAGTCCTAGAGACATTATTCTCGAGTGTCTTGACGGTTGTAATGAAA 321
Query 697 GAGACAAACAAGGTGACACTAGGATCCCCACCACGAATCA-AAA-ATC--ATT------- 745
|||||||||||| ||| | ||||| || ||||||||||| ||| | | |||
Sbjct 320 GAGACAAACAAGTTGAGAGAAGGATACCTACCACGAATCATAAAGAACGTATTCAACCCC 261
Query 746 --T-GATTGTCAATGTATACAGGAGGGCGTTTACTTTCTATCATCACTGACATCTTTCCC 802
| || |||||||||| |||||| |||||||| | |||||||||||| |||||| ||||
Sbjct 260 ACTTGACTGTCAATGTAGACAGGAAGGCGTTTAGTATCTATCATCACTAACATCTCTCCC 201
Query 803 GGCATCCAGTAACTAATTATTGGATTG 829
|||||||||||||||||||| ||||||
Sbjct 200 GGCATCCAGTAACTAATTATGGGATTG 174
> AT5G27590.1 | Symbols: | transposable element gene | chr5:9738492-9740473
REVERSE LENGTH=963
Length=963
Score = 296 bits (160), Expect = 2e-79
Identities = 318/388 (82%), Gaps = 36/388 (9%)
Strand=Plus/Minus
Query 470 GATCGAGGGTACTTCCCCCCATAGATCCATCATCACCCTGATAATCATCATACCCAGCAC 529
||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||
Sbjct 553 GATCGAGGGTACTTCCCCCCATAGATCCATCGTCACCCTGATAATCATCATACCCATCAC 494
Query 530 CATCTTCGTTTTCCTCC-TCCTCTTCTTCATCCTCATCTGTTTTATCGTCTTCAACGTCG 588
|||||||||| ||| || | | ||| ||||||||||||||||||||||||||||||||||
Sbjct 493 CATCTTCGTTATCC-CCAT-C-CTT-TTCATCCTCATCTGTTTTATCGTCTTCAACGTCG 438
Query 589 TCTTGCTCATCTACGGCCTCATTATTTCCATCTACATTTGAAGCACTCCCACACACACGG 648
|||||||||| |||||||||||||||| |||| ||||||||| ||| ||| || |
Sbjct 437 TCTTGCTCATATACGGCCTCATTATTTTCATCAACATTTGAAACACGGTCACTTTCA-GC 379
Query 649 TAACTCTCACCATCG-GTCCTAGGGACAGTATTCCCGAGTG-C----C--TTG-AA-A-- 696
| | ||||||| | ||||||| |||| ||||| ||||| | | ||| || |
Sbjct 378 -ATCG-TCACCAT-GAGTCCTAGAGACATTATTCTTGAGTGTCTTGACGGTTGTAATAAA 322
Query 697 -GAGACAAACAAGGTGACACTAGGATCCCCACCACGAATCA-AAA-ATC--ATT------ 745
|||||||||||| ||| | ||||| || ||||||||||| ||| | | |||
Sbjct 321 AGAGACAAACAAGTTGAGAGAAGGATACCTACCACGAATCATAAAGAACGTATTCAACCC 262
Query 746 ---T-GATTGTCAATGTATACAGGAGGGCGTTTACTTTCTATCATCACTGACATCTTTCC 801
| || |||||||||| ||||||||||||||| | |||||||||||| |||||| |||
Sbjct 261 CACTTGACTGTCAATGTAGACAGGAGGGCGTTTAGTATCTATCATCACTAACATCTCTCC 202
Query 802 CGGCATCCAGTAACTAATTATTGGATTG 829
||||||||||||||||||||| ||||||
Sbjct 201 CGGCATCCAGTAACTAATTATGGGATTG 174
> AT5G03950.1 | Symbols: | transposable element gene | chr5:1066206-1066964
FORWARD LENGTH=759
Length=759
Score = 296 bits (160), Expect = 2e-79
Identities = 323/395 (82%), Gaps = 38/395 (10%)
Strand=Plus/Minus
Query 470 GATCGAGGGTACTTCCCCCCATAGATCCATCATCACCCTGATAATCATCATACCCAGCAC 529
||||||||||||||||||| ||||||||||| |||||||||||||||||||||||| |||
Sbjct 487 GATCGAGGGTACTTCCCCCTATAGATCCATCGTCACCCTGATAATCATCATACCCACCAC 428
Query 530 CATCTTCGTTTTCCTCCTCCTCTTCTTCATCCTCATCTGTTTTATCGTCTTCAACGTCGT 589
|| |||||| ||| |||||||||| |||||||| |||||||||||||||| ||||||
Sbjct 427 GATATTCGTTGTCCCCCTCCTCTTC---ATCCTCATTTGTTTTATCGTCTTCATCGTCGT 371
Query 590 CTTGCTCATCTACGGCCTCATTATTTCCATCTACATTTGAAGCACTCCCACACACACGGT 649
|||||||||||||||||||||||||| |||| ||||||||| |||| |||| |||||||
Sbjct 370 CTTGCTCATCTACGGCCTCATTATTTTCATCAACATTTGAAACACTATCACATACACGGT 311
Query 650 AACTCTCA-C--CATC-----G-GTCCTAGGGACAGTATTCCCGAGTG-C----C--TTG 693
|||| ||| | |||| | ||||||| |||| ||||| |||||| | | |||
Sbjct 310 AACTTTCAGCATCATCACCATGAGTCCTAGAGACATTATTCTCGAGTGTCTTGACGGTTG 251
Query 694 -AA--A--GAGACAAACAAGGTGACACTAGGATCCCCACCACGAATCAAAAAT--C--AT 744
|| | |||||||||||| ||| | ||||| || ||||||||| ||||| | ||
Sbjct 250 TAATGAAAGAGACAAACAAGTTGAGAGAAGGATACCGACCACGAATTAAAAAGAACGTAT 191
Query 745 ----------TTGATTGTCAATGTATACAGGAGGGCGTTTACTTTCTATCATCACTGACA 794
|||| |||||||||| ||||||||||||||| | |||||||||||| |||
Sbjct 190 CCAACCCCACTTGACTGTCAATGTAGACAGGAGGGCGTTTAGTATCTATCATCACTAACA 131
Query 795 TCTTTCCCGGCATCCAGTAACTAATTATTGGATTG 829
||| |||||||||||||||||||||||| ||||||
Sbjct 130 TCTCTCCCGGCATCCAGTAACTAATTATGGGATTG 96
> AT5G44313.1 | Symbols: | transposable element gene | chr5:17851014-17851727
FORWARD LENGTH=714
Length=714
Score = 296 bits (160), Expect = 2e-79
Identities = 317/387 (82%), Gaps = 34/387 (9%)
Strand=Plus/Minus
Query 470 GATCGAGGGTACTTCCCCCCATAGATCCATCATCACCCTGATAATCATCATACCCAGCAC 529
||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||
Sbjct 442 GATCGAGGGTACTTCCCCCCATAGATCCATCGTCACCCTGATAATCATCATACCCATCAC 383
Query 530 CATCTTCGTTTTCCTCCTCCTCTTCTTCATCCTCATCTGTTTTATCGTCTTCAACGTCGT 589
|||||||||| | | || |||| |||||||||||||||||||||||||||||||||||||
Sbjct 382 CATCTTCGTTGT-C-CC-CCTCCTCTTCATCCTCATCTGTTTTATCGTCTTCAACGTCGT 326
Query 590 CTTGCTCATCTACGGCCTCATTATTTCCATCTACATTTGAAGCACTCCCACACACACGGT 649
|||||||||||||||||||||||||| |||| ||||||||| ||| ||| || |
Sbjct 325 CTTGCTCATCTACGGCCTCATTATTTTCATCAACATTTGAAACACGGTCACTTTCA-GC- 268
Query 650 AACTCTCACCATCG-GTCCTAGGGACAGTATTCCCGAGTG-C----C--TTG-AA--A-- 696
| | ||| ||| | | ||||| |||| |||||| ||||| | | ||| || |
Sbjct 267 ATCA-TCATCAT-GAGCCCTAGAGACATTATTCCTGAGTGTCTTGACGGTTGTAATGAAA 210
Query 697 GAGACAAACAAGGTGACACTAGGATCCCCACCACGAATCA-AAA-A---T---CA--T-- 744
|||||||||||| ||| | ||||| || ||||||||||| ||| | | || |
Sbjct 209 GAGACAAACAAGTTGAGAGAAGGATACCTACCACGAATCATAAAGAACGTATTCAACTCC 150
Query 745 --TTGATTGTCAATGTATACAGGAGGGCGTTTACTTTCTATCATCACTGACATCTTTCCC 802
|||| |||||||||| ||||||||||||||| | |||||||||||| |||||| ||
Sbjct 149 ACTTGACTGTCAATGTAGACAGGAGGGCGTTTAGTATCTATCATCACTAACATCTCTCTG 90
Query 803 GGCATCCAGTAACTAATTATTGGATTG 829
|||||||||||||||||||| ||||||
Sbjct 89 GGCATCCAGTAACTAATTATGGGATTG 63
> AT1G17900.1 | Symbols: | transposable element gene | chr1:6157368-6158130
REVERSE LENGTH=763
Length=763
Score = 285 bits (154), Expect = 5e-76
Identities = 315/387 (81%), Gaps = 34/387 (9%)
Strand=Plus/Minus
Query 470 GATCGAGGGTACTTCCCCCCATAGATCCATCATCACCCTGATAATCATCATACCCAGCAC 529
|||||||||||||||||||||||||| |||| |||||||||||||||||||||||| |||
Sbjct 554 GATCGAGGGTACTTCCCCCCATAGATTCATCGTCACCCTGATAATCATCATACCCATCAC 495
Query 530 CATCTTCGTTTTCCTCCTCCTCTTCTTCATCCTCATCTGTTTTATCGTCTTCAACGTCGT 589
|||||||||| ||| ||| | ||| ||||||||||||||||||||||||||||| || ||
Sbjct 494 CATCTTCGTTGTCCCCCT-C-CTT-TTCATCCTCATCTGTTTTATCGTCTTCAATGTTGT 438
Query 590 CTTGCTCATCTACGGCCTCATTATTTCCATCTACATTTGAAGCACTCCCACACACACGGT 649
|||||||||||||||||||||||||| |||| ||||||||| ||| ||| || |
Sbjct 437 CTTGCTCATCTACGGCCTCATTATTTTCATCAACATTTGAAACACGGTCACTTTCA-GC- 380
Query 650 AACTCTCACCATCG-GTCCTAGGGACAGTATTCCCGAGTG-C----C--TTG-AA--A-- 696
| | ||||||| | ||||||| |||| |||| ||||||| | | ||| || |
Sbjct 379 ATCG-TCACCAT-GAGTCCTAGAGACATTATTTCCGAGTGTCTTGACGGTTGTAATGAAA 322
Query 697 GAGACAAACAAGGTGACACTAGGATCCCCACCACGAATCAAAAAT--C--ATT------- 745
|||||||||||| ||| | ||||| || ||||||||| ||||| | |||
Sbjct 321 GAGACAAACAAGTTGAGAGAAGGATACCTACCACGAATTAAAAAGAACGTATTCAACCCC 262
Query 746 --T-GATTGTCAATGTATACAGGAGGGCGTTTACTTTCTATCATCACTGACATCTTTCCC 802
| || |||||||||| ||||||||||||||| | |||||||||||| |||||| ||||
Sbjct 261 ACTTGACTGTCAATGTAGACAGGAGGGCGTTTAGTATCTATCATCACTAACATCTCTCCC 202
Query 803 GGCATCCAGTAACTAATTATTGGATTG 829
|| ||||||||||||||||| ||||||
Sbjct 201 GGAATCCAGTAACTAATTATGGGATTG 175
> AT5G28637.1 | Symbols: | transposable element gene | chr5:10645026-10646093
REVERSE LENGTH=1068
Length=1068
Score = 248 bits (134), Expect = 6e-65
Identities = 307/383 (80%), Gaps = 42/383 (11%)
Strand=Plus/Minus
Query 484 CCCCCCATAGATCCATCATCACCCTGATAATCATCATACCCAGCACCATCTTCGTTTTCC 543
||||||||||||||||| | |||||||||||||||||||||| |||| ||||| || | |
Sbjct 551 CCCCCCATAGATCCATCGTTACCCTGATAATCATCATACCCATCACCGTCTTCATTGT-C 493
Query 544 TCCTCCTCTTCTTCATCCTCATCTGTTTTATCGTCTTCAACGTCGTCTTGCTCATCTACG 603
|| |||| |||||||||||||||||||||||||||||||||||||||| |||||||| |
Sbjct 492 -CC-CCTCCTCTTCATCCTCATCTGTTTTATCGTCTTCAACGTCGTCTTCCTCATCTATG 435
Query 604 GCCTCATTATTTCCATCTA-CATTTGAAGCACTCCCACACACACGGT-A-----A-C-TC 654
|||||||||||| ||| || ||||||||||||| |||||||||||| | | | ||
Sbjct 434 GCCTCATTATTTTCAT-TAACATTTGAAGCACTATCACACACACGGTCACTTTCAGCATC 376
Query 655 -TCACCATCG-GTCCTAGGGACAGTATTCCCGAGTG-C----C--TTG-AA--A--GAGA 700
||||||| | ||||||| |||| |||||||||||| | | ||| || | ||||
Sbjct 375 GTCACCAT-GAGTCCTAGAGACATTATTCCCGAGTGTCTTGACGGTTGTAATGAAAGAGA 317
Query 701 CAAACAAGGTGACACTAGGATCCCCACCACGAATCAAAAA-----T--C-A-T-----TT 746
|||||||| ||| | ||||| || ||||||||||||||| | | | | ||
Sbjct 316 CAAACAAGTTGAGAGAAGGATACCGACCACGAATCAAAAAGAACGTATCCAATCCCACTT 257
Query 747 GATTGTCAATGTATACAGGAGGGCGTTTACTTTCTATCATCACTGACATCTTTCCCGGCA 806
|| | |||||| | ||| ||||||||| | | |||||||| ||| |||||| ||||| ||
Sbjct 256 GACTATCAATGAAGACAAGAGGGCGTTGAGTATCTATCATGACTAACATCTCTCCCGACA 197
Query 807 TCCAGTAACTAATTATTGGATTG 829
|| ||||||||||||| ||||||
Sbjct 196 TCTAGTAACTAATTATGGGATTG 174
> AT3G45120.1 | Symbols: | transposable element gene | chr3:16511730-16512050
REVERSE LENGTH=321
Length=321
Score = 187 bits (101), Expect = 1e-46
Identities = 137/154 (89%), Gaps = 3/154 (2%)
Strand=Plus/Minus
Query 510 ATAATCATCATACCCAGCACCATCTTCGTTTTCCTCCTCCTCTTCTTCATCCTCATCTGT 569
|||| ||||||||||| ||||||||||||| | | || |||| |||||||||||||||||
Sbjct 318 ATAAGCATCATACCCATCACCATCTTCGTTGT-C-CC-CCTCCTCTTCATCCTCATCTGT 262
Query 570 TTTATCGTCTTCAACGTCGTCTTGCTCATCTACGGCCTCATTATTTCCATCTACATTTGA 629
|||||||||||||||||||||||||||||||||| ||||||||||| |||| ||||||||
Sbjct 261 TTTATCGTCTTCAACGTCGTCTTGCTCATCTACGACCTCATTATTTTCATCAACATTTGA 202
Query 630 AGCACTCCCACACACACGGTAACTCTCACCATCG 663
| |||| ||||||||| || ||| ||| |||||
Sbjct 201 AACACTATCACACACACAGTCACTTTCAGCATCG 168
> AT2G16820.1 | Symbols: | transposable element gene | chr2:7290104-7290952
REVERSE LENGTH=606
Length=606
Score = 169 bits (91), Expect = 5e-41
Identities = 113/123 (92%), Gaps = 3/123 (2%)
Strand=Plus/Minus
Query 470 GATCGAGGGTACTTCCCCCCATAGATCCATCATCACCCTGATAATCATCATACCCAGCAC 529
|||||| || ||||| ||||||||||||||| |||||||||||||||||||||||| |||
Sbjct 330 GATCGAAGGCACTTCTCCCCATAGATCCATCGTCACCCTGATAATCATCATACCCATCAC 271
Query 530 CATCTTCGTTTTCCTCCTCCTCTTCTTCATCCTCATCTGTTTTATCGTCTTCAACGTCGT 589
|||||||||| | | || |||| |||||||||||||||||||||||||||||||||||||
Sbjct 270 CATCTTCGTTGT-C-CC-CCTCCTCTTCATCCTCATCTGTTTTATCGTCTTCAACGTCGT 214
Query 590 CTT 592
|||
Sbjct 213 CTT 211
> AT4G05583.2 | Symbols: | transposable element gene | chr4:2860476-2861486
FORWARD LENGTH=1011
Length=1011
Score = 124 bits (67), Expect = 1e-27
Identities = 77/82 (94%), Gaps = 0/82 (0%)
Strand=Plus/Minus
Query 109 CTACGTTGCTTGTAGCAAAAGCATTGTTTGATTGCGAGATAAGACATTATTTGTTGTATG 168
||| ||||||| |||||||||||||||||||||||||||||| ||||| |||||||||||
Sbjct 244 CTAGGTTGCTTATAGCAAAAGCATTGTTTGATTGCGAGATAAAACATTGTTTGTTGTATG 185
Query 169 ACTTTTCTGTTCTTAAAAACAC 190
||||||||||||||| ||||||
Sbjct 184 ACTTTTCTGTTCTTAGAAACAC 163
> AT2G06600.1 | Symbols: | transposable element gene | chr2:2639598-2642549
FORWARD LENGTH=2952
Length=2952
Score = 86.1 bits (46), Expect = 5e-16
Identities = 86/105 (82%), Gaps = 4/105 (4%)
Strand=Plus/Minus
Query 335 ACCTTCGCAGCCTGTATCTTGTACACATTCTGTTGTGTACGTACATTGGTACAAACCATG 394
||||||||| | ||| |||| | |||| || | ||||||||||||||||||||||||||
Sbjct 849 ACCTTCGCATCTTGTCTCTTCTGCACAGACTCTAGTGTACGTACATTGGTACAAACCATG 790
Query 395 TTGACACGTACGTCT-TGGAGTCACCG-TTGGTGTACGGTCAACC 437
||||||||| || ||||| || | ||||||||| |||||||
Sbjct 789 TTGACACGT-CGGGGATGGAG-CAGAGGTTGGTGTACTGTCAACC 747
Score = 71.3 bits (38), Expect = 1e-11
Identities = 60/70 (86%), Gaps = 4/70 (6%)
Strand=Plus/Minus
Query 202 TAGTGTACGTACATTGGTACAAACCATGTTGACACGTACGTCT-TGGAGTCACCG-TTGG 259
||||||||||||||||||||||||||||||||||||| || ||||| || | ||||
Sbjct 817 TAGTGTACGTACATTGGTACAAACCATGTTGACACGT-CGGGGATGGAG-CAGAGGTTGG 760
Query 260 TGTACGGTCA 269
||||| ||||
Sbjct 759 TGTACTGTCA 750
> AT5G28487.1 | Symbols: | transposable element gene | chr5:10441691-10445995
REVERSE LENGTH=4305
Length=4305
Score = 80.5 bits (43), Expect = 2e-14
Identities = 85/105 (81%), Gaps = 4/105 (4%)
Strand=Plus/Minus
Query 335 ACCTTCGCAGCCTGTATCTTGTACACATTCTGTTGTGTACGTACATTGGTACAAACCATG 394
||||||||| | ||| || | | |||| || | ||||||||||||||||||||||||||
Sbjct 852 ACCTTCGCATCTTGTCTCCTCTGCACAGACTCTAGTGTACGTACATTGGTACAAACCATG 793
Query 395 TTGACACGTACGTCT-TGGAGTCACCG-TTGGTGTACGGTCAACC 437
||||||||| || ||||| || | ||||||||| |||||||
Sbjct 792 TTGACACGT-CGGGGATGGAG-CAGAGGTTGGTGTACAGTCAACC 750
Score = 71.3 bits (38), Expect = 1e-11
Identities = 60/70 (86%), Gaps = 4/70 (6%)
Strand=Plus/Minus
Query 202 TAGTGTACGTACATTGGTACAAACCATGTTGACACGTACGTCT-TGGAGTCACCG-TTGG 259
||||||||||||||||||||||||||||||||||||| || ||||| || | ||||
Sbjct 820 TAGTGTACGTACATTGGTACAAACCATGTTGACACGT-CGGGGATGGAG-CAGAGGTTGG 763
Query 260 TGTACGGTCA 269
||||| ||||
Sbjct 762 TGTACAGTCA 753
> AT2G12150.1 | Symbols: | transposable element gene | chr2:4884407-4887236
REVERSE LENGTH=2830
Length=2830
Score = 80.5 bits (43), Expect = 2e-14
Identities = 85/105 (81%), Gaps = 4/105 (4%)
Strand=Plus/Minus
Query 335 ACCTTCGCAGCCTGTATCTTGTACACATTCTGTTGTGTACGTACATTGGTACAAACCATG 394
||||||||| | ||| || | | |||| || | ||||||||||||||||||||||||||
Sbjct 852 ACCTTCGCATCTTGTCTCCTCTGCACAGACTCTAGTGTACGTACATTGGTACAAACCATG 793
Query 395 TTGACACGTACGTCT-TGGAGTCACCG-TTGGTGTACGGTCAACC 437
||||||||| || ||||| || | ||||||||| |||||||
Sbjct 792 TTGACACGT-CGGGGATGGAG-CAGAGGTTGGTGTACAGTCAACC 750
Score = 71.3 bits (38), Expect = 1e-11
Identities = 60/70 (86%), Gaps = 4/70 (6%)
Strand=Plus/Minus
Query 202 TAGTGTACGTACATTGGTACAAACCATGTTGACACGTACGTCT-TGGAGTCACCG-TTGG 259
||||||||||||||||||||||||||||||||||||| || ||||| || | ||||
Sbjct 820 TAGTGTACGTACATTGGTACAAACCATGTTGACACGT-CGGGGATGGAG-CAGAGGTTGG 763
Query 260 TGTACGGTCA 269
||||| ||||
Sbjct 762 TGTACAGTCA 753
> AT3G28110.1 | Symbols: | transposable element gene | chr3:10461763-10462827
FORWARD LENGTH=1065
Length=1065
Score = 75.0 bits (40), Expect = 1e-12
Identities = 85/106 (80%), Gaps = 6/106 (6%)
Strand=Plus/Minus
Query 335 ACCTTCGCAGCCTGTATCTTGTACACATTCTGTTGTGTACGTACATTGGTACAAACCATG 394
||||||||| | ||| || | | |||| || | ||||||||||||||||||||||||||
Sbjct 852 ACCTTCGCATCTTGTCTCCTCTGCACAGACTCTAGTGTACGTACATTGGTACAAACCATG 793
Query 395 TTGACACGTACGTCT-TGGAGTCACCG-TTGGTGTACG-GTCAACC 437
||||||||| || ||||| || | |||||||| | |||||||
Sbjct 792 TTGACACGT-CGGGGATGGAG-CAGAGGTTGGTGTA-GTGTCAACC 750
Score = 69.4 bits (37), Expect = 5e-11
Identities = 37/37 (100%), Gaps = 0/37 (0%)
Strand=Plus/Minus
Query 202 TAGTGTACGTACATTGGTACAAACCATGTTGACACGT 238
|||||||||||||||||||||||||||||||||||||
Sbjct 820 TAGTGTACGTACATTGGTACAAACCATGTTGACACGT 784
> AT3G42626.1 | Symbols: | transposable element gene | chr3:14717888-14720449
REVERSE LENGTH=2562
Length=2562
Score = 75.0 bits (40), Expect = 1e-12
Identities = 84/105 (80%), Gaps = 4/105 (4%)
Strand=Plus/Minus
Query 335 ACCTTCGCAGCCTGTATCTTGTACACATTCTGTTGTGTACGTACATTGGTACAAACCATG 394
||||||||| | ||| || | | |||| || | |||||||||||||||||||||||||
Sbjct 656 ACCTTCGCATCTTGTCTCCTCTGCACAGACTCTAATGTACGTACATTGGTACAAACCATG 597
Query 395 TTGACACGTACGTCT-TGGAGTCACCG-TTGGTGTACGGTCAACC 437
||||||||| || ||||| || | ||||||||| |||||||
Sbjct 596 TTGACACGT-CGGGGATGGAG-CAGAGATTGGTGTACTGTCAACC 554
Score = 65.8 bits (35), Expect = 6e-10
Identities = 57/67 (85%), Gaps = 4/67 (6%)
Strand=Plus/Minus
Query 205 TGTACGTACATTGGTACAAACCATGTTGACACGTACGTCT-TGGAGTCACCG-TTGGTGT 262
|||||||||||||||||||||||||||||||||| || ||||| || | |||||||
Sbjct 621 TGTACGTACATTGGTACAAACCATGTTGACACGT-CGGGGATGGAG-CAGAGATTGGTGT 564
Query 263 ACGGTCA 269
|| ||||
Sbjct 563 ACTGTCA 557
> AT2G05490.1 | Symbols: | transposable element gene | chr2:2006873-2009701
REVERSE LENGTH=2829
Length=2829
Score = 75.0 bits (40), Expect = 1e-12
Identities = 85/106 (80%), Gaps = 6/106 (6%)
Strand=Plus/Minus
Query 335 ACCTTCGCAGCCTGTATCTTGTACACAT-TCTGTTGTGTACGTACATTGGTACAAACCAT 393
||||||||| | ||| || | | ||| | || | |||||||||||||||||||||||||
Sbjct 852 ACCTTCGCATCTTGTCTCCTCTGCAC-TGACTCTAGTGTACGTACATTGGTACAAACCAT 794
Query 394 GTTGACACGTACGTCT-TGGAGTCACCG-TTGGTGTACGGTCAACC 437
|||||||||| || ||||| || | ||||||||| |||||||
Sbjct 793 GTTGACACGT-CGGGGATGGAG-CAGAGGTTGGTGTACAGTCAACC 750
Score = 71.3 bits (38), Expect = 1e-11
Identities = 60/70 (86%), Gaps = 4/70 (6%)
Strand=Plus/Minus
Query 202 TAGTGTACGTACATTGGTACAAACCATGTTGACACGTACGTCT-TGGAGTCACCG-TTGG 259
||||||||||||||||||||||||||||||||||||| || ||||| || | ||||
Sbjct 820 TAGTGTACGTACATTGGTACAAACCATGTTGACACGT-CGGGGATGGAG-CAGAGGTTGG 763
Query 260 TGTACGGTCA 269
||||| ||||
Sbjct 762 TGTACAGTCA 753
> AT2G16150.1 | Symbols: | transposable element gene | chr2:7009205-7011913
FORWARD LENGTH=2709
Length=2709
Score = 75.0 bits (40), Expect = 1e-12
Identities = 84/105 (80%), Gaps = 4/105 (4%)
Strand=Plus/Minus
Query 335 ACCTTCGCAGCCTGTATCTTGTACACATTCTGTTGTGTACGTACATTGGTACAAACCATG 394
||||||||| | ||| || | | |||| || | ||||||||||||||||||||||||||
Sbjct 852 ACCTTCGCATCTTGTCTCCTCTGCACAGACTCTAGTGTACGTACATTGGTACAAACCATG 793
Query 395 TTGACACGTACGTCT-TGGAGTCACCG-TTGGTGTACGGTCAACC 437
||||||||| || | ||| || | ||||||||| |||||||
Sbjct 792 TTGACACGT-CGGGGATAGAG-CAGAGGTTGGTGTACAGTCAACC 750
Score = 69.4 bits (37), Expect = 5e-11
Identities = 37/37 (100%), Gaps = 0/37 (0%)
Strand=Plus/Minus
Query 202 TAGTGTACGTACATTGGTACAAACCATGTTGACACGT 238
|||||||||||||||||||||||||||||||||||||
Sbjct 820 TAGTGTACGTACATTGGTACAAACCATGTTGACACGT 784
> AT1G45070.1 | Symbols: | transposable element gene | chr1:17035871-17038630
FORWARD LENGTH=2760
Length=2760
Score = 75.0 bits (40), Expect = 1e-12
Identities = 82/102 (80%), Gaps = 4/102 (4%)
Strand=Plus/Minus
Query 338 TTCGCAGCCTGTATCTTGTACACATTCTGTTGTGTACGTACATTGGTACAAACCATGTTG 397
|||||| | ||| || | | |||| || | |||||||||||||||||||||||||||||
Sbjct 849 TTCGCATCTTGTCTCCTCTGCACAGACTCTAGTGTACGTACATTGGTACAAACCATGTTG 790
Query 398 ACACGTACGTCT-TGGAGTCACCG-TTGGTGTACGGTCAACC 437
|||||| || ||||| || | ||||||||| |||||||
Sbjct 789 ACACGT-CGGGGATGGAG-CAGAGGTTGGTGTACAGTCAACC 750
Score = 71.3 bits (38), Expect = 1e-11
Identities = 60/70 (86%), Gaps = 4/70 (6%)
Strand=Plus/Minus
Query 202 TAGTGTACGTACATTGGTACAAACCATGTTGACACGTACGTCT-TGGAGTCACCG-TTGG 259
||||||||||||||||||||||||||||||||||||| || ||||| || | ||||
Sbjct 820 TAGTGTACGTACATTGGTACAAACCATGTTGACACGT-CGGGGATGGAG-CAGAGGTTGG 763
Query 260 TGTACGGTCA 269
||||| ||||
Sbjct 762 TGTACAGTCA 753
> AT1G29075.1 | Symbols: | transposable element gene | chr1:10153543-10154701
FORWARD LENGTH=1159
Length=1159
Score = 65.8 bits (35), Expect = 6e-10
Identities = 35/35 (100%), Gaps = 0/35 (0%)
Strand=Plus/Minus
Query 202 TAGTGTACGTACATTGGTACAAACCATGTTGACAC 236
|||||||||||||||||||||||||||||||||||
Sbjct 819 TAGTGTACGTACATTGGTACAAACCATGTTGACAC 785
Score = 63.9 bits (34), Expect = 2e-09
Identities = 57/68 (84%), Gaps = 2/68 (3%)
Strand=Plus/Minus
Query 335 ACCTTCGCAGCCTGTAT-CTTGTACACATTCTGTTGTGTACGTACATTGGTACAAACCAT 393
||||||||| | ||| | | | | |||| || | |||||||||||||||||||||||||
Sbjct 851 ACCTTCGCATCTTGTCTAC-TCTGCACAGACTCTAGTGTACGTACATTGGTACAAACCAT 793
Query 394 GTTGACAC 401
||||||||
Sbjct 792 GTTGACAC 785
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 40388254188
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5