BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg481540
Length=1045
Score E
Sequences producing significant alignments: (Bits) Value
AT2G41920.1 | Symbols: | Protein kinase superfamily protein | ... 1424 0.0
AT5G27790.1 | Symbols: | Protein kinase superfamily protein | ... 1240 0.0
AT2G34290.1 | Symbols: | Protein kinase superfamily protein | ... 968 0.0
AT2G41910.1 | Symbols: | Protein kinase superfamily protein | ... 643 0.0
> AT2G41920.1 | Symbols: | Protein kinase superfamily protein
| chr2:17499404-17500452 FORWARD LENGTH=1049
Length=1049
Score = 1424 bits (771), Expect = 0.0
Identities = 966/1058 (91%), Gaps = 22/1058 (2%)
Strand=Plus/Plus
Query 1 GTTGCCAAAGCTATCAGAAGAA-TCAATC---GTTCTATTTGCAATGGTGGCGTTGGATT 56
||||||||| |||||||||||| |||||| ||||||||||||||||||||||| ||||
Sbjct 1 GTTGCCAAATCTATCAGAAGAATTCAATCGTTGTTCTATTTGCAATGGTGGCGTTAGATT 60
Query 57 TGGAGTTCGAAAGGTAT-C-TGGGAACAGGTTCGTTTGGTTCGGTTAGTCTCTTCAAGTA 114
||||||||||||||||| | |||||| |||||||||||||||| ||||||||||||||
Sbjct 61 TGGAGTTCGAAAGGTATCCGGGGGAAC--GTTCGTTTGGTTCGGTGAGTCTCTTCAAGTA 118
Query 115 CAAAAGACGACGCGACGGCGAGACTCTCTACGCCGCCGTGAAAACCTCTGGCTAC-AAAC 173
|||||||| ||||||||||||||||| ||||||||||||||||| ||| || || |||
Sbjct 119 CAAAAGACAACGCGACGGCGAGACTCAATACGCCGCCGTGAAAACATCTAGCGACGAAA- 177
Query 174 ACGCTAAGTCTCTCTACAAAGAGTTTCAGATCCTGTCTGAATTCAAGGGCTGTTCGAGAA 233
| |||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||||
Sbjct 178 ATGCTAAGTCTCTCTACAAAGAGTTTCAGATCCTCTCTCAATTCAAGGGTTGTTCGAGAA 237
Query 234 TCGTCCAATGCTACGGTAACGGAGTAAAACAGAGATTTAACGACAAGGGTTACGTAGAGT 293
|||||||||||||||| || ||||||||| ||| |||||||||||||||||||||||| |
Sbjct 238 TCGTCCAATGCTACGGGAATGGAGTAAAAGAGATATTTAACGACAAGGGTTACGTAGAAT 297
Query 294 ACAAGATTGCCATGGAGTACGCAGCTGGAGGAAGCTTGAGCAATTTCGTGGACCGATTCA 353
||||||||||||||||||||||| |||||||||||||||| ||||| ||||||||||||
Sbjct 298 ACAAGATTGCCATGGAGTACGCATTTGGAGGAAGCTTGAGCGATTTCATGGACCGATTCA 357
Query 354 AAGACAGGAAATTGCCTGATTCGATGATCAGAGAATTTACTCGTATGCTTCTTGAGGGTT 413
||||||| |||||| ||||||||||||||||||| ||||||||||||||||| |||||||
Sbjct 358 AAGACAGAAAATTGTCTGATTCGATGATCAGAGAGTTTACTCGTATGCTTCTCGAGGGTT 417
Query 414 TAGCCACGATTCACGA-ACACGGCTATGTTCACTGCGATCTCAAACCCGAAAACATCCTT 472
|||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct 418 TAGCCACGATTCAC-AGACACGGCTATGTTCACTGCGATCTCAAACCCGAAAACATCCTT 476
Query 473 GTTTTCCCTAGTTCTGTCTACAAAAACGGCGCGTGGAGATCA--TCTTACCAATTGAAGA 530
||||||||||||||||||||||| ||||||||||||| ||| || ||| |||||||||
Sbjct 477 GTTTTCCCTAGTTCTGTCTACAAGAACGGCGCGTGGA--TCAGATCCTACGAATTGAAGA 534
Query 531 TTTCAGATTTCGGGTTGTCGAAAAGAGATGGAGACACTAAGTGGTGGCATCCTCGTCAA- 589
|||| ||||||||| ||||||||||||||||||||||| |||||||||| ||||| |||
Sbjct 535 TTTCTGATTTCGGGATGTCGAAAAGAGATGGAGACACTCAGTGGTGGCAACCTCG-CAAA 593
Query 590 CCGTTTGCGGGAACACCAATCTATATGTCGCCGGAGTCGATCTCTCACGGTGAGATAGGG 649
|| | || ||||||||| |||||||||||||| ||||||||||||||||| |||||||||
Sbjct 594 CCATATGTGGGAACACCGATCTATATGTCGCCTGAGTCGATCTCTCACGGGGAGATAGGG 653
Query 650 AAAGGACTTGATTTATGGTCGTTGGGATGTGTCGTATTGGAGATGTATACTGGAAAGA-G 708
|||||||||||||||||||||||||||||||| || ||||||||||| ||| |||||| |
Sbjct 654 AAAGGACTTGATTTATGGTCGTTGGGATGTGTGGTGTTGGAGATGTACACTAGAAAGAAG 713
Query 709 ACCATGGTGGCATACTAACTATGAATTAGAAGATCTCATGAAGTGTTACGAGCCATTGTT 768
|||||||||||||||||||||||||||||||| |||||||||||||| ||||| |||||
Sbjct 714 -CCATGGTGGCATACTAACTATGAATTAGAAGAGCTCATGAAGTGTTATGAGCCGTTGTT 772
Query 769 TCCGCGTAATCTTCCTTGCGATGCAAAACTCTTTCTCATGACCTGCTTTGCTTTTGAGCC 828
||||||||||||||||||||||||||||||||||||||||||||||||||| | || ||
Sbjct 773 TCCGCGTAATCTTCCTTGCGATGCAAAACTCTTTCTCATGACCTGCTTTGCGTCCGAACC 832
Query 829 ACATGAGAGAAAAGACGCGTTGACATTGTTGAGGCAAAGCTTCTTCCATGGAGATGCCAA 888
| ||||||| ||||| ||||||||||||||||||||||||||||| |||||||||| |||
Sbjct 833 AGATGAGAGGAAAGATGCGTTGACATTGTTGAGGCAAAGCTTCTTGCATGGAGATGTCAA 892
Query 889 TAAGTTCACAAAGCTTCAGATGAATGCGAAGATTGACAATCCGGATGATTTCACCTTGCA 948
|||||||||||| | ||||||||||| ||||||||||| | |||||||||| ||| ||||
Sbjct 893 TAAGTTCACAAACCGTCAGATGAATGTGAAGATTGACAGTGCGGATGATTTTACCCTGCA 952
Query 949 ACTGGAGAAACTTAGC-ATGATGCTTTCGGAAATTAGGACTATGTGTTAATTTGAAGTTG 1007
|||||||||| ||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct 953 ACTGGAGAAAGTTAGCCA-GATGCTTTCGGAAATTAGGACTATGTGTTAATTTGAAGTTG 1011
Query 1008 TTGAGCTTTGCAAAGAGCCCTGGTCAACACTGATATTG 1045
|||||| |||| |||||||||||| ||| | ||||||
Sbjct 1012 ATGAGCTCTGCAGAGAGCCCTGGTCCACAGTAATATTG 1049
> AT5G27790.1 | Symbols: | Protein kinase superfamily protein
| chr5:9840925-9842003 REVERSE LENGTH=984
Length=984
Score = 1240 bits (671), Expect = 0.0
Identities = 892/995 (90%), Gaps = 30/995 (3%)
Strand=Plus/Plus
Query 10 GCTATCAGAAGAATCAATCGTTCTATTTGCAATGGTGGCGTTGGATTTGGAGTTCGAAAG 69
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 13 GCTATCAAAAGAATCAATCGTTCTATTTGCAATGGTGGCGTTGGATTTGGAGTTCGAAAG 72
Query 70 GTATCTGGGAACAGGTTCGTTTGGTTCGGTTAGTCTCTTCAAG-TACAAAAGACGACGCG 128
|||| |||||| |||||||||||| ||||| || || ||| || |||||||||||| |||
Sbjct 73 GTATTTGGGAA-AGGTTCGTTTGGATCGGTGAGACTTTTC-AGTTACAAAAGACGATGCG 130
Query 129 ACGGCGAGACTCTCTACGCCGCCGTGAAAACCTCTGGCTACAAACACGCTAAGTCTCTCT 188
|||| ||||||||||||||| | |||||||||||| | | | |||||||||||||
Sbjct 131 ACGGTGAGACTCTCTACGCCACTGTGAAAACCTCT-G-----ATGATGCTAAGTCTCTCT 184
Query 189 ACAAAGAGTTTCAGATCCTGTCTGAATTCAAGGGCTGTTCGAGAATCGTCCAATGCTACG 248
|| |||||||||||||||||||| |||||||||||||| |||||||||||||||||||||
Sbjct 185 ACGAAGAGTTTCAGATCCTGTCTAAATTCAAGGGCTGTCCGAGAATCGTCCAATGCTACG 244
Query 249 GTAACGGAGTAAAACAGAGATTTAACGACAAGGGTTACGTAGAGTACAAGATTGCC-ATG 307
|||||||||||||||||||||||||||||||||||||||||||||||| |||| || |||
Sbjct 245 GTAACGGAGTAAAACAGAGATTTAACGACAAGGGTTACGTAGAGTACATGATT-CCTATG 303
Query 308 GAGTACGCAGCTGGAGGAAGCTTGAGCAATTTCGTGGACCGATTCAAAGACAGGAAATTG 367
||||| ||| | ||||||||||||| ||||||| ||||||||||||| ||||| ||||||
Sbjct 304 GAGTATGCAACCGGAGGAAGCTTGAACAATTTCATGGACCGATTCAACGACAGAAAATTG 363
Query 368 CCTGATTCGATGATCAGAGAA-TTTACTCGTATGCTTCTTGAGGGTTTAGCCACGATTCA 426
|||||| ||||||||||| || ||||||||||||||||| |||||||| ||||| |||||
Sbjct 364 CCTGATCCGATGATCAGA-AAGTTTACTCGTATGCTTCTCGAGGGTTTGGCCACAATTCA 422
Query 427 C-GAACACGGCTATGTTCACTGCGATCTCAAACCCGAAAACATCCTTGTTTTCCCTAGTT 485
| || ||||||||||||||| |||| |||||||||| ||||| |||||||||||| |||
Sbjct 423 CAGAT-ACGGCTATGTTCACTACGATATCAAACCCGAGAACATACTTGTTTTCCCTGGTT 481
Query 486 CTGTCTACAAAAACGGCGCGTGGAGATCAT-CTTACCAATTGAAGATTTCAGATTTCGGG 544
|||||||||| | ||||||||||||| || ||||| ||||||||||||| |||||||||
Sbjct 482 CTGTCTACAAGGAGGGCGCGTGGAGAT-ATTCTTACAAATTGAAGATTTCTGATTTCGGG 540
Query 545 TTGTCGAAAAGAGATGGAGACACTAAGTGGTGGCATCCTCGTCAACCGTTTGCGGGAACA 604
|||||||||||||||||||||||||||||||||||||||| | || ||| ||||||||||
Sbjct 541 TTGTCGAAAAGAGATGGAGACACTAAGTGGTGGCATCCTCTTAAATCGTATGCGGGAACA 600
Query 605 CCAATCTATATGTCGCCGGAGTCGATCTCTCACGGTGAGATAGGGAAAGGACTTGATTTA 664
| |||||||||||||||||||| ||||||||||| |||||||||||||||||||| |||
Sbjct 601 CGGATCTATATGTCGCCGGAGTCTATCTCTCACGGGGAGATAGGGAAAGGACTTGACTTA 660
Query 665 TGGTCGTTGGGATGTGTCGTATTGGAGATGTATACTGGAAAGAGACCATGGTGGCATACT 724
||||||||||||||||| || ||||||||||| ||||| |||||||||||||||||||||
Sbjct 661 TGGTCGTTGGGATGTGTTGTGTTGGAGATGTACACTGGGAAGAGACCATGGTGGCATACT 720
Query 725 AACTATGAATTAGAAGATCTCATGAAGTGTTACGAGCCATTGTTTCCGCGTAATCTTCCT 784
||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 721 AACTATGAACTAGAAGATCTCATGAAGTGTTACGAGCCATTGTTTCCGCCTAATCTTCCT 780
Query 785 TGCGATGCAAAACTCTTTCTCATGACCTGCTTTGCTTTTGAGCCACATGAGAGAAAAGAC 844
||||||||||||||||||||||||||||||||||| ||| ||| ||||||| ||||||
Sbjct 781 TGCGATGCAAAACTCTTTCTCATGACCTGCTTTGCGCCTGAACCAGATGAGAGGAAAGAC 840
Query 845 GCGTTGACATTGTTGAGGCAAAGCTTCTTCCATGGAGATGCCAATAAGTTCACAAAGCTT 904
||||||||||||||||| ||||||||||| | | |||||| ||||||||| |||||||||
Sbjct 841 GCGTTGACATTGTTGAGACAAAGCTTCTTTCGTCGAGATGTCAATAAGTTGACAAAGCTT 900
Query 905 CAGATGAATGCGAAGATTGACAATCCGGA-TGATTTCACCTTGCAACTGGAGAAACTTAG 963
| |||| | | |||| |||| | | |||||||||| || ||||| ||||||||||
Sbjct 901 C---TGAA-G-G----TTGATAATC-GTAATGATTTCACCCTGGAACTGAAGAAACTTAG 950
Query 964 -CATGATGCTTTCGGAAATTAGGACTATGTGTTAA 997
|| |||||||||||||||||||| |||| |||||
Sbjct 951 ACA-GATGCTTTCGGAAATTAGGAGTATGCGTTAA 984
> AT2G34290.1 | Symbols: | Protein kinase superfamily protein
| chr2:14472633-14473430 REVERSE LENGTH=798
Length=798
Score = 968 bits (524), Expect = 0.0
Identities = 729/822 (89%), Gaps = 37/822 (5%)
Strand=Plus/Plus
Query 57 TGGAGTTCGAAAGGTATCT-GGGAACAGGTTCGTTTGGTTCGGTTAGTCTCTTCAAG-TA 114
||||||||||||||||||| ||| | |||||||||||| ||||| || || ||| || ||
Sbjct 2 TGGAGTTCGAAAGGTATCTGGGGGA-AGGTTCGTTTGGATCGGTGAGCCTTTTC-AGTTA 59
Query 115 CAAAAGACGACGCGACGGCGAGACTCTCTACGCCGCCGTGAAAACCTCTGGCTACAAACA 174
||||||||| |||||| |||||||||||||||||||||||||||||| | || |
Sbjct 60 TAAAAGACGATGCGACGTTGAGACTCTCTACGCCGCCGTGAAAACCTCT-G--AC---GA 113
Query 175 CGCTAAGTCTCTCTACAAAGAGTTTCAGATCCTGTCTGAATTCAAGGGCTGTTCGAGAAT 234
||||||||||||||| ||||||||||||| |||||| |||||||||| || ||||||||
Sbjct 114 TGCTAAGTCTCTCTACGAAGAGTTTCAGATTCTGTCTAAATTCAAGGGTTGCTCGAGAAT 173
Query 235 CGTCCAATGCTACGGTAACGGAGTAAAACAGAGATTTAACGACAAGGGTTACGTAGAGTA 294
||||||||||||||||| ||||||| |||||||| |||||||||||||||||||||||||
Sbjct 174 CGTCCAATGCTACGGTAGCGGAGTAGAACAGAGACTTAACGACAAGGGTTACGTAGAGTA 233
Query 295 CAAGATTGCC-ATGGAGTACGCAGCTGGAGGAAGCTTGAGCAATTTCGTGGACCGATTCA 353
|| |||| || |||||||||||||| ||||||||||||||| ||||| ||||||||||||
Sbjct 234 CACGATT-CCTATGGAGTACGCAGCCGGAGGAAGCTTGAGCGATTTCATGGACCGATTCA 292
Query 354 AAGACAGGAAATTGCCTGATTCGATGATCAGAGAA-TTTACTCGTATGCTTCTTGAGGGT 412
| |||| |||||||||||| ||||||||||| || ||||||||||||||||| ||||||
Sbjct 293 ACGACAAAAAATTGCCTGATCCGATGATCAGA-AAGTTTACTCGTATGCTTCTCGAGGGT 351
Query 413 TTAGCCACGATTCACGA-ACACGGCTATGTTCACTGCGATCTCAAACCCGAAAACATCCT 471
|||||||| |||||| | ||||||||||||||||||||||||||||||||| ||||||||
Sbjct 352 TTAGCCACAATTCAC-AGACACGGCTATGTTCACTGCGATCTCAAACCCGAGAACATCCT 410
Query 472 TGTTTTCCCTAGTTCTGTCTACAAAAACGGCGCGTGGAGATCATCTTACCAATTGAAGAT 531
|||||||||| ||||||||| || |||| || | ||||||||||
Sbjct 411 TGTTTTCCCTGGTTCTGTCT-----------GC-----GATC-TC--A--AATTGAAGAT 449
Query 532 TTCAGATTTCGGGTTGTCGAAAAGAGATGGAGACACTAAGTGGTGGCATCCTCGTCAACC 591
||| ||||| |||||||||||||||||||||||||||| |||||||||||||| | || |
Sbjct 450 TTCTGATTTTGGGTTGTCGAAAAGAGATGGAGACACTACGTGGTGGCATCCTCTTAAATC 509
Query 592 GTTTGCGGGAACACCAATCTATATGTCGCCGGAGTCGATCTCTCACGGTGAGATAGGGAA 651
|| |||||||||||| |||||||||||||||||||| ||||||||||| |||||||||||
Sbjct 510 GTATGCGGGAACACCGATCTATATGTCGCCGGAGTCTATCTCTCACGGGGAGATAGGGAA 569
Query 652 AGGACTTGATTTATGGTCGTTGGGATGTGTCGTATTGGAGATGTATACTGGAAAGAGACC 711
||||||||| |||||||||||||||||||| || ||||||||||| ||||| ||||||||
Sbjct 570 AGGACTTGACTTATGGTCGTTGGGATGTGTTGTGTTGGAGATGTACACTGGGAAGAGACC 629
Query 712 ATGGTGGCATACTAACTATGAATTAGAAGATCTCATGAAGTGTTACGAGCCATTGTTTCC 771
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 630 ATGGTGGCATACTAACTATGAACTAGAAGATCTCATGAAGTGTTACGAGCCATTGTTTCC 689
Query 772 GCGTAATCTTCCTTGCGATGCAAAACTCTTTCTCATGACCTGCTTTGCTTTTGAGCCACA 831
|| |||||||||||| |||||||||||||||||||||||||||||||| ||| ||| |
Sbjct 690 GCCTAATCTTCCTTGTGATGCAAAACTCTTTCTCATGACCTGCTTTGCGCCTGAACCAGA 749
Query 832 TGAGAGAAAAGACGCGTTGACATTGTTGAGGCAAAGCTTCTT 873
|||||| ||||||||||||||||||||||| |||||||||||
Sbjct 750 TGAGAGGAAAGACGCGTTGACATTGTTGAGACAAAGCTTCTT 791
> AT2G41910.1 | Symbols: | Protein kinase superfamily protein
| chr2:17496956-17498077 FORWARD LENGTH=1122
Length=1122
Score = 643 bits (348), Expect = 0.0
Identities = 688/850 (81%), Gaps = 32/850 (4%)
Strand=Plus/Plus
Query 70 GTATCTGGGAACA-GGTTCGTTTGGTTCGGTTAGTCTCTTCAAGTACAAAAGACGACGCG 128
|||||| |||| | ||||| | |||||||| ||||| ||||||| | || || |
Sbjct 30 GTATCTCGGAA-AGGGTTCATACGGTTCGGTGAGTCTTTTCAAGT--ATTCGA-AAC-C- 83
Query 129 ACGGCGA-GACTCTCTACGCCGCCGTGAAAACCTCTG--GCTACAAACACGCTAAGTCTC 185
|| || | |||||||||| |||| |||| | || || ||| ||| ||||| ||||||
Sbjct 84 AC-GC-ACGACTCTCTACACCGCGGTGATGA-CT-TGCAACTATAAAAACGCTGAGTCTC 139
Query 186 TCTACAAAGAGTTTCAG-ATCCTGTCTGAATTCAAGGGCTGTTCGAGAATCGTCCAATGC 244
|| | ||||||||| | ||| |||||||||||||||| ||||||||||| ||||| |||
Sbjct 140 TCGAGAAAGAGTTT-GGAATCTTGTCTGAATTCAAGGGTTGTTCGAGAATTGTCCAGTGC 198
Query 245 TACGGTAACGGAGTAAAACAGAGAT-TTAACGACAAGGGTTACGTAGAGTACAAGATTGC 303
|| | ||| |||| | | ||| || | ||| ||||| || |||||| | || |||
Sbjct 199 TATGAAAACAGAGTTATAGAGA-ATCTGGACGTTGAGGGTAACAAAGAGTATATGA-TGC 256
Query 304 -CATGGAGTACGCAGCTGGAGGAAGCTTGAGCAATTTCGTGGACCGATTCA-AAGACAGG 361
||||||||||||||||||||||||||||| | |||| || | || ||| |||||| |
Sbjct 257 TAATGGAGTACGCAGCTGGAGGAAGCTTGAGGACTTTCATGAAACG-TTCCGAAGACAAG 315
Query 362 AAATTGCCTGATTCGATGATCAGAGAATTTACTCGTATGCTTCTTGAGGGTTTAGCCACG 421
|||||||||||| | |||| ||||| |||||||| ||| | || || || ||||||||
Sbjct 316 AAATTGCCTGATCCTTTGATAAGAGAGTTTACTCGAATGATCCTCGAAGGCTTAGCCACA 375
Query 422 ATTCACGAACACGGCTATGTTCACTGCGATCTCAAACCCGAAAACATCCTTGTTTTCCCT 481
||||||| ||| |||||||| |||||||||||||||||||| |||||||| ||||||||
Sbjct 376 ATTCACGGACAGGGCTATGTCCACTGCGATCTCAAACCCGATAACATCCTCGTTTTCCCA 435
Query 482 AGTTCTGTCTACAAAAACG-GCGCGTGGAGATCATCTTACCAATTGAAGATTTCAGATTT 540
|| | ||||||||| || | | || |||||||| |||||| ||||||||||||| |||||
Sbjct 436 AGATGTGTCTACAAGAA-GAGAGCATGGAGATCGTCTTACGAATTGAAGATTTCTGATTT 494
Query 541 CGGGTTGTCGAAAAGAGATGGAGACACTAAGTGGTGGCATCCTCGTCAACCGTTTGCGGG 600
|| |||||||||||||||||||||| ||||||||||||||||| || ||||||| |||
Sbjct 495 TGGATTGTCGAAAAGAGATGGAGACAGTAAGTGGTGGCATCCTCATCGTCCGTTTGTGGG 554
Query 601 AACACCAATCTATATGTCGCCGG-AGTCGATCTCTCACGGTGAGATAGGGAAAGGACTTG 659
||| | ||||| |||||||||| | ||| | |||||||| |||| ||||| ||||||||
Sbjct 555 AACTGCGATCTACATGTCGCCGGGA-TCGGTTTCTCACGGCGAGACAGGGAGAGGACTTG 613
Query 660 ATTTATGGTCGTTGGGATGTGTCGTATTGGAGATGTATACTGGAAAGAGACCATGGTGGC 719
|||||||||| || |||||||| || ||||||||||| |||||||||| |||||||||||
Sbjct 614 ATTTATGGTCATTAGGATGTGTGGTGTTGGAGATGTACACTGGAAAGAAACCATGGTGGC 673
Query 720 ATACTAACTATGAATTAGAAG-ATCTCATGAAGTGTTACGAGCCATTGTTTCCGCGTAAT 778
||| ||||||||| || |||| |||||| ||| || |||| |||| || ||||| || ||
Sbjct 674 ATAATAACTATGACTT-GAAGGATCTCAAGAACTGGTACGCGCCAATGATTCCGAGTGAT 732
Query 779 CTTCCTTGCGATGCAAAACTCTTTCTCATGACCTGCTTTGCTTTTGAGCCACATGAGAGA 838
||||||||||||||||||| |||| | ||| | |||||||| || | || | ||||||
Sbjct 733 CTTCCTTGCGATGCAAAACACTTTATTATGGCTTGCTTTGCGTTAAATACAAACGAGAGA 792
Query 839 AAAGACGCGTTGACATTGTTG-AGGCAAAGCTTCTTCCATGGAGATGCC-AATAAGTTCA 896
| |||||| |||||||||||| || || |||||||| | ||| | || |||||| |||
Sbjct 793 AGAGACGCATTGACATTGTTGGAG-CATAGCTTCTTGCGTGGGG-TGGTTAATAAGATCA 850
Query 897 CAAAGCTTCA 906
|||||| |||
Sbjct 851 CAAAGCCTCA 860
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 51238829940
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5