BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg481547
Length=1122
Score E
Sequences producing significant alignments: (Bits) Value
AT2G26740.1 | Symbols: ATSEH, SEH | soluble epoxide hydrolase |... 1533 0.0
AT2G26750.1 | Symbols: | alpha/beta-Hydrolases superfamily pro... 1421 0.0
> AT2G26740.1 | Symbols: ATSEH, SEH | soluble epoxide hydrolase
| chr2:11392965-11394279 REVERSE LENGTH=1171
Length=1171
Score = 1533 bits (830), Expect = 0.0
Identities = 1002/1084 (92%), Gaps = 16/1084 (1%)
Strand=Plus/Plus
Query 1 ACCACACAAAGCAAAAACAATGGAGCACAGAAAGGTGAGAGGGAACGGCATAGACATCCA 60
||||||||||| || |||||||| ||||||||||| |||||||||||||||||||| ||
Sbjct 4 ACCACACAAAGTAATTACAATGGAACACAGAAAGGTAAGAGGGAACGGCATAGACATTCA 63
Query 61 CGTGGCAATCCAAGGTCCCTCCGATGGTCCGATAGTCCTTCTCCTCCATGGCTTCCCTGA 120
||| |||||||||||||||||||||||||| |||||||| ||||||||||| ||||||||
Sbjct 64 CGTAGCAATCCAAGGTCCCTCCGATGGTCCTATAGTCCTCCTCCTCCATGGTTTCCCTGA 123
Query 121 GCTTTGGTACTCATGGCGCCACCAGATCCCCGGACTCGCCGCTTGTGGATACCGTGCCGT 180
|||||||||||||||||||||||||||||| |||||||||||| |||| |||||||||||
Sbjct 124 GCTTTGGTACTCATGGCGCCACCAGATCCCTGGACTCGCCGCTCGTGGCTACCGTGCCGT 183
Query 181 GGCTCCTGACCTACGTGGTTATGGTGACTCCGACGCTCCGGCGGAGATCTCTTCCTACAC 240
|||||||||||||||||||| ||||||||||| ||||| || |||||||||||||||||
Sbjct 184 CGCTCCTGACCTACGTGGTTACGGTGACTCCGATGCTCCCGCTGAGATCTCTTCCTACAC 243
Query 241 ATGCTTCAACATCGTAGGTGACTTAGTCGCCGTCATATCCGCCTTAACCGCCTCAGAGGA 300
||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 244 ATGCTTCAACATCGTTGGTGACTTAATCGCCGTCATATCCGCCTTAACCGCCTCAGAGGA 303
Query 301 TGAGAAGGTGTTTGTGGTTGGACATGACTGGGGAGCTCTCATCGCTTGGTACCTT-TGTC 359
||||||||| ||||||||||||||||| ||||||||||||||||||||||| || ||||
Sbjct 304 TGAGAAGGTCTTTGTGGTTGGACATGATTGGGGAGCTCTCATCGCTTGGTA-TTTATGTC 362
Query 360 TCTTCCGACCAGATAAG-GTTAAAGCTTTGGTCAACCTTAGTGTTCCGTTCTCTTTCCGT 418
|||||||||||||| || || |||||| |||||||||| ||||||||||||||||||||
Sbjct 363 TCTTCCGACCAGAT-AGAGTCAAAGCTCTGGTCAACCTCAGTGTTCCGTTCTCTTTCCGG 421
Query 419 CCAATGGATCCATCCACAAAGCCCGTTGATCGCATGCGTGCTTTCTACGGCGATGATTAC 478
|||| |||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 422 CCAACCGATCCATCGGTGAAGCCCGTTGATCGCATGCGTGCTTTCTACGGCGATGATTAC 481
Query 479 TATGTCTGCAGGTTTCAGGAAGTTGGAGATATAGAAGCTGAGATTGCAGAGGTTGGAACA 538
||| ||||||||||||||||| |||||||| |||||||||||||||||||||||||||||
Sbjct 482 TATATCTGCAGGTTTCAGGAATTTGGAGATGTAGAAGCTGAGATTGCAGAGGTTGGAACA 541
Query 539 GAGAGAGTCATGAAGAGGA-TACTCACTTATAGAACTCCTGGACCGATTATTATACCGAA 597
|||||||||||||||| || |||||||||||||||||||||||||| | ||||| |||||
Sbjct 542 GAGAGAGTCATGAAGA-GACTACTCACTTATAGAACTCCTGGACCGGTAATTATCCCGAA 600
Query 598 AAACAAAAGCTTTTGGGGATCCAAAGACGAAAGTATACCTCTACCTTCTTGGGTAACGGA 657
||||||| |||||||||||||||| ||||| |||||| || || |||||| |||||||
Sbjct 601 GGACAAAAGTTTTTGGGGATCCAAAGGCGAAACTATACCACTCCCGTCTTGGCTAACGGA 660
Query 658 GGAAGATGTTACTTACTTCGTCAGCAAGTTTGAAGAGAAAGGCTTCTCTGGTCCAGTCAA 717
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 661 GGAAGATGTTGCTTACTTCGTCAGCAAGTTTGAAGAGAAAGGCTTCTCTGGTCCAGTCAA 720
Query 718 TTTCTACCGTAACTTTAACCGGAACAATGAGTTGTTGGGTCCATGGGTGGGGAGCAAAAT 777
|| |||||||||||| ||| ||||||||||||||||||||||||||||||| ||||||||
Sbjct 721 TTACTACCGTAACTTCAACAGGAACAATGAGTTGTTGGGTCCATGGGTGGGAAGCAAAAT 780
Query 778 CCAGGTTCCTACAAAGTTTGTGATAGGGGAGCTTGACT-TGGTCTACTATATGCCTGGTG 836
|||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||
Sbjct 781 CCAGGTTCCTACAAAGTTTGTGATAGGGGAGCTTGA-TCTGGTCTACTATATGCCTGGTG 839
Query 837 TGAAGGAATACATAAATGGTCCCAAGTTTAAAGAAGATGTGCCTTTGCTTGAAGAGCCTG 896
|||||||||| ||| |||||||| ||||||| ||||||||||||||||||||||||||||
Sbjct 840 TGAAGGAATATATACATGGTCCCCAGTTTAAGGAAGATGTGCCTTTGCTTGAAGAGCCTG 899
Query 897 TGGTCATGGAAGGAGTGGCTCACTTCATTAACCAAGAAAAGCCTCAAGAGATTCTCCAAA 956
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 900 TGGTCATGGAAGGAGTGGCTCACTTCATTAACCAAGAAAAGCCTCAGGAGATTCTCCAAA 959
Query 957 TTATCCTTGATTTCATCTCCAAATTCTAATCTTGTTTTCTCTTAAATCATTCTTGTAA-- 1014
|||||||||||||||||||||||||||||| ||| |||| ||||||| | |||| |||
Sbjct 960 TTATCCTTGATTTCATCTCCAAATTCTAATGTTGCTTTCCCTTAAATTACTCTTTTAATC 1019
Query 1015 --GTTCCATAATAAGTTGAATTATGAGGATA--CATCCTCATGTATTTCGTTATATCATC 1070
||||||||||||||||||||||||||||| ||||||||||||| ||| |||||||
Sbjct 1020 AAGTTCCATAATAAGTTGAATTATGAGGATATACATCCTCATGTATG--GTTGTATCATC 1077
Query 1071 CTAT 1074
||||
Sbjct 1078 CTAT 1081
> AT2G26750.1 | Symbols: | alpha/beta-Hydrolases superfamily protein
| chr2:11395896-11397092 REVERSE LENGTH=1045
Length=1045
Score = 1421 bits (769), Expect = 0.0
Identities = 958/1048 (91%), Gaps = 17/1048 (2%)
Strand=Plus/Plus
Query 17 ACAATGGAGCACAGAAAGGTGAGAGGGAACGGCATAGACATCCACGTGGCAATCCAAGGT 76
||||||||||||||||| || |||||||||||||||||||||||||| ||||||||||||
Sbjct 5 ACAATGGAGCACAGAAATGTAAGAGGGAACGGCATAGACATCCACGTAGCAATCCAAGGT 64
Query 77 CCCTCCGATGGTCCGATAGTCCTTCTCCTCCATGGCTTCCCTGAGCTTTGGTACTCATGG 136
|||||||||||| | |||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct 65 CCCTCCGATGGTACTATAGTCCTCCTCCTCCATGGTTTCCCTGAGCTTTGGTACTCATGG 124
Query 137 CGCCACCAGATCCCCGGACTCGCCGCTTGTGGATACCGTGCCGTGGCTCCTGACCTACGT 196
|||||||||||| |||||||||||||| |||| ||||||||||| |||||||||||||||
Sbjct 125 CGCCACCAGATCTCCGGACTCGCCGCTCGTGGCTACCGTGCCGTCGCTCCTGACCTACGT 184
Query 197 GGTTATGGTGACTCCGACGCTCCGGCGGAGATCTCTTCCTACACATGCTTCAACATCGTA 256
||||| ||||||||||| |||||||| ||||| ||||||| |||||||| ||||| |||
Sbjct 185 GGTTACGGTGACTCCGATGCTCCGGCTGAGATTTCTTCCTTTACATGCTTTAACATAGTA 244
Query 257 GGTGACTTAGTCGCCGTCATATCCGCCTTAACCGCCTC-A-GAGGATGAGAAGGTGTTTG 314
|||||||||||||||||||||||| |||||| || | |||||| ||||||||||||
Sbjct 245 GGTGACTTAGTCGCCGTCATATCCACCTTAA-----TCAAGGAGGATAAGAAGGTGTTTG 299
Query 315 TGGTTGGACATGACTGGGGAGCTCTCATCGCTTGGTACCTTTGTCTCTTCCGACCAGATA 374
||||||||||||| |||||||||||||||||||||||||||||||| || |||||||||
Sbjct 300 TGGTTGGACATGATTGGGGAGCTCTCATCGCTTGGTACCTTTGTCTTTTTAGACCAGATA 359
Query 375 AGGTTAAAGCTTTGGTCAACCTTAGTGTTCCGTTCTCTTTCCGTCCAATGGATCCATCCA 434
| || ||||||||||| ||||||||||||||||| |||||| | |||| ||||||||
Sbjct 360 AAGTCAAAGCTTTGGTTAACCTTAGTGTTCCGTTGTCTTTCTGGCCAACCGATCCATCGG 419
Query 435 CAAAGCCCGTTGATCGCATGCGTGCTTTCTACGGCGATGATTACTATGTCTGCAGGTTTC 494
|||||||||||||||||||||||| | |||||| ||||||||||||||||||||||||
Sbjct 420 TGAAGCCCGTTGATCGCATGCGTGCTGTATACGGCAATGATTACTATGTCTGCAGGTTTC 479
Query 495 AGGAAGTTGGAGATATAGAAGCTGAGATTGCAGAGGTTGGAACAGAGAGAGTCATGAAGA 554
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 480 AGGAAGTTGGAGATATAGAAGCTGAGATTGCAGAGGTTGGAACAGAGAGAGTCATGAAGA 539
Query 555 GGA-TACTCACTTATAGAACTCCTGGACCGATTATTATACCGAAAAACAAAAGCTTTTGG 613
| | |||||||||||||||||||||||||| ||||||||||||| ||||||| ||||||
Sbjct 540 G-ACTACTCACTTATAGAACTCCTGGACCGCTTATTATACCGAAGGACAAAAGTTTTTGG 598
Query 614 GGATCCAAAGACGAAAGTATACCTCTACCTTCTTGGGTAACGGAGGAAGATGTTACTTAC 673
|||||||||| ||||| |||||| ||||| |||||| ||||||||||||||||| |||||
Sbjct 599 GGATCCAAAGGCGAAACTATACCACTACCGTCTTGGCTAACGGAGGAAGATGTTGCTTAC 658
Query 674 TTCGTCAGCAAGTTTGAAGAGAAAGGCTTCTCTGGTCCAGTCAATTTCTACCGTAACTTT 733
||||||||||||||| ||||||||||||||| |||||||||||||| ||||||||||||
Sbjct 659 TTCGTCAGCAAGTTTAAAGAGAAAGGCTTCTGTGGTCCAGTCAATTACTACCGTAACTTC 718
Query 734 AACCGGAACAATGAGTTGTTGGGTCCATGGGTGGGGAGCAAAATCCAGGTTCCTACAAAG 793
||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 719 AACAGGAACAATGAGTTGTTGGGTCCATGGGTGGGAAGCAAAATCCAGGTTCCTACAAAG 778
Query 794 TTTGTGATAGGGGAGCTTGA-CTTGGTCTACTATATGCCTGGTGTGAAGGAATACATAAA 852
|||||||||||||||||||| || |||||||||||||||||||||||||||||| ||| |
Sbjct 779 TTTGTGATAGGGGAGCTTGATCT-GGTCTACTATATGCCTGGTGTGAAGGAATATATACA 837
Query 853 TGGTCCCAAGTTTAAAGAAGATGTGCCTTTGCTTGAAGAGCCTGTGGTCATGGAAGGAGT 912
||||||| ||||||| ||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 838 TGGTCCCCAGTTTAAGGAAGATGTGCCTTTGATTGAAGAGCCTGTGGTCATGGAAGGAGT 897
Query 913 GGCTCACTT-CATTAACCAAGAAAAGCCTCAAGAGATTCTCCAAATTATCCTTGATTTCA 971
||||||||| | |||||||||| ||||||||||||||||||||||| |||||||||||||
Sbjct 898 GGCTCACTTTC-TTAACCAAGAGAAGCCTCAAGAGATTCTCCAAATAATCCTTGATTTCA 956
Query 972 TCTCCAAATTCTAATCTTGTT-TTCTCTTA-AAT-CATTCTTGTAAGTTCCATAATAAGT 1028
|||||| |||||||| || | ||| |||| || || ||||||||||||||||||||||
Sbjct 957 TCTCCACATTCTAATATT-TCGTTCCCTTATAAAACACTCTTGTAAGTTCCATAATAAGT 1015
Query 1029 TGAATTATGAGGATACATCCTCATGTAT 1056
|||||| ||||||| ||| ||||||||
Sbjct 1016 TGAATTTTGAGGATGTATCTTCATGTAT 1043
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 55019797320
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5