BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg481615
Length=1808
Score E
Sequences producing significant alignments: (Bits) Value
AT2G27200.1 | Symbols: | P-loop containing nucleoside triphosp... 2630 0.0
AT1G08410.1 | Symbols: | P-loop containing nucleoside triphosp... 1295 0.0
> AT2G27200.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:11625417-11628189
FORWARD LENGTH=1876
Length=1876
Score = 2630 bits (1424), Expect = 0.0
Identities = 1643/1745 (94%), Gaps = 30/1745 (2%)
Strand=Plus/Plus
Query 1 AAGGTCTCAGCC-GAGAAGAAAATGGGGAAGAACGAGAAAACATCTCTAGGTCGAGCTTT 59
||||| ||| || |||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 12 AAGGTTTCA-CCGGAGAAGAAAATGGGGAAGAACGAGAAAACATCTCTAGGTCGAGCCTT 70
Query 60 AGTGAAGCACCATAACCATATGATCCAAGAAACCAAGGAAAAAGGCAAATCCTACAAAGA 119
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 71 AGTGAAGCACCATAACCATATGATCCAGGAAACCAAGGAAAAAGGCAAATCCTACAAAGA 130
Query 120 TCAACACAAGAAGGTTCTAGAATCTGTAACCGAAGTCAGCGACATCGATGCCATCATCGA 179
|||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||
Sbjct 131 TCAACACAAGAAGGTTCTAGAATCCGTGACCGAAGTCAGCGACATCGATGCCATCATCGA 190
Query 180 ACAAGCCGAGGAAGCTGAACGGCTTTTCGCGATTCATCACGATTCCGCAACGCCTGTTCC 239
||||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||||||
Sbjct 191 ACAAGCCGAAGAAGCTGAACGTCTTTTCGCGATTCATCACGATTCCGCAACTCCTGTTCC 250
Query 240 TATCAATATGGACACAGGTTCGAGTTCAAGTGGTATAACAGCTAAAGAATGGAAAGACCA 299
|||||||||||| |||||||||||||| ||||| ||||||||||||||||||||||| ||
Sbjct 251 TATCAATATGGATACAGGTTCGAGTTCGAGTGGCATAACAGCTAAAGAATGGAAAGAGCA 310
Query 300 AAGGATGAGAGAAGAGGCTTTACATGCTAGTAGTCTTCAAGTTCCTCGAAGACCTCATTG 359
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 311 AAGGATGAGAGAAGAGGCTTTACATGCTAGTAGTCTTCAAGTTCCTCGTAGACCTCATTG 370
Query 360 GACACCTAAAATGAATGTGGA-ACAACTTGATGCTAATGAAAGACAAGCTTTTCTTACTT 418
||||||||||||||||||||| | |||||||||||||||||| |||||||||||| ||||
Sbjct 371 GACACCTAAAATGAATGTGGAGA-AACTTGATGCTAATGAAAAACAAGCTTTTCTCACTT 429
Query 419 GGCGACGGAAACTTGCGAGCCTCGAGGAAAATGAAAAGCTTGTGTTGACACCATTCGAGA 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 430 GGCGACGGAAACTTGCGAGCCTCGAGGAAAATGAAAAGCTTGTGTTGACACCATTCGAGA 489
Query 479 AGAACCTTGACATCTGGAGACAACTTTGGCGAGTGCTTGAACGAAGTGATTTGATTGTTA 538
|||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 490 AGAACCTTGATATCTGGAGACAACTTTGGCGAGTGCTTGAACGTAGTGATTTGATTGTTA 549
Query 539 TGGTTGTTGATGCTAGAGATCCTCTGTTTTACCGTTGTCCTGATCTTGAGGCATATGCAC 598
|||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||
Sbjct 550 TGGTTGTTGATGCTAGAGATCCTCTGTTTTACCGCTGCCCTGATCTTGAGGCATATGCAC 609
Query 599 AAGAAATTGATGAGCATaaaaaaaCAATGCTTCTGGTCAACAAGGCGGATTTGTTACCTT 658
|||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||
Sbjct 610 AAGAAATTGATGAGCATAAAAAAACAATGCTTCTGGTCAACAAGGCAGATCTGTTACCTT 669
Query 659 CTTATGTCAGGGAGAAATGGGCGGAATACTTCTCCCGCAACAATATTCTGTTCGTCTTCT 718
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 670 CTTATGTCAGGGAGAAATGGGCGGAATACTTCTCCCGCAACAATATTCTGTTTGTCTTCT 729
Query 719 GGTCAGCCAAAGCTGCTACGGCTACCCTAGAAGGTAAACCCCTGAAAGAACAGTGGAGAG 778
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 730 GGTCAGCCAAAGCTGCTACGGCTACCCTAGAAGGTAAACCCCTGAAAGAACAGTGGAGAG 789
Query 779 CACCTGATACCTCTCAGAAGACAGATAACCCAGCTGTGAAAGTATATGGAAGGGATGAGC 838
||||||||||| | ||||||||||||||||||||||||||||||||||||||||| || |
Sbjct 790 CACCTGATACCACACAGAAGACAGATAACCCAGCTGTGAAAGTATATGGAAGGGACGACC 849
Query 839 TTTTGGCTCGATTAAAACTTGAGGCTCTAGAGATAGTAAAAATGAGGAAATCTAGAGGAG 898
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 850 TTTTGGATCGATTAAAACTTGAGGCTCTAGAGATAGTAAAAATGAGGAAATCTAGAGGAG 909
Query 899 TTTCCGCAACTGCTGCTGAATCACACCGCGAACAAGTTGTGGTTGGCTTTGTTGGGTACC 958
||||||||||| || ||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 910 TTTCCGCAACTTCTACTGAATCACACTGCGAACAAGTTGTGGTTGGCTTTGTTGGGTACC 969
Query 959 CGAATGTGGGAAAGAGTTCGACAATCAACGCGTTGGTAGGTCAGAAGCGAACAGGTGTCA 1018
|||||||||| |||||||||||||||||||| |||||||||||||||||||| |||||||
Sbjct 970 CGAATGTGGGGAAGAGTTCGACAATCAACGCATTGGTAGGTCAGAAGCGAACTGGTGTCA 1029
Query 1019 CATCTACCCCCGGGAAAACGAAGCATTTCCAGACATTGATAATCTCCGAGGATCTAATGC 1078
||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||
Sbjct 1030 CATCTACCCCCGGGAAAACAAAGCATTTCCAGACATTGATAATCTCTGAGGATCTAATGC 1089
Query 1079 TCTGCGATTGCCCTGGTTTAGTCTTCCCTTCATTCTCAAGCTCAAGATATGAAATGATTG 1138
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1090 TCTGCGATTGCCCTGGTTTAGTCTTCCCTTCATTCTCAAGCTCAAGATATGAAATGGTTG 1149
Query 1139 CTTCTGGAGTTCTTCCAATAGACCGGATGACCGAGCACCGTGAAGCTATTAAGGTTGTGG 1198
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1150 CTTCTGGAGTTCTTCCAATAGACCGGATGACCGAGCACCTTGAAGCTATTAAGGTTGTGG 1209
Query 1199 CTGAACGTGTTCCTCGGCATGCCATTGAGGATGTGTACAACATCTCTCTACCTAAACCCA 1258
|||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1210 CTGAACTTGTTCCTCGACATGCCATTGAGGATGTGTACAACATCTCTCTACCTAAACCCA 1269
Query 1259 AAAGCTATGAGCCTCAGTCACGCCCACCACTTGCATCAGAGCTTCTAAGAACTTACTGCC 1318
|| |||||| |||||||| |||||||| ||||| |||||||||||||||||||||||||
Sbjct 1270 AATCCTATGAACCTCAGTCCCGCCCACCTCTTGCCTCAGAGCTTCTAAGAACTTACTGCC 1329
Query 1319 TTTCTCGTGGCTATGTTGCCTCTAGTGGACTACCTGATGAGACAAGAGCAGCTAGGCAGA 1378
| |||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1330 TCTCTCGTGGTTATGTTGCCTCTAGTGGACTACCTGATGAGACTAGAGCAGCTAGGCAGA 1389
Query 1379 TTCTGAAAGATTACATTGAAGGTAAGCTTCCACATTTTGCAATGCCTCCAGAGATAACAC 1438
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1390 TTCTGAAAGATTACATTGAAGGTAAGCTTCCACATTTTGCAATGCCTCCAGAGATAACCC 1449
Query 1439 GAGATGATGAAAACGAGACAGCGGATGATAATATGGGAGCCGAAACACGAGAAGGTTCAC 1498
|||||||||||||||||||||||||||| | | |||||||||||||| ||||||||||||
Sbjct 1450 GAGATGATGAAAACGAGACAGCGGATGACACTTTGGGAGCCGAAACAAGAGAAGGTTCAC 1509
Query 1499 AGCCTGAGGAGGAAGGCAAAGAAGCTACTGGCCTTGGTCTTGGTCTTGATCAAGTTCTAG 1558
|| ||||| || |||| |||||||| | | | | |||||||||||||||||||||||
Sbjct 1510 AGACTGAGAAGAAAGGTGAAGAAGCT-C---C-TAG-TCTTGGTCTTGATCAAGTTCTAG 1563
Query 1559 ATGATCTGAGCTCGTTTGATCTTGCAAATGGAATTGGGTCTAACAAAAAGAAACAGCACA 1618
||||||| |||||||||||||||||||||||| ||| |||| ||||| |||||||||||
Sbjct 1564 ATGATCTTAGCTCGTTTGATCTTGCAAATGGACTTGTGTCTTCCAAAACGAAACAGCACA 1623
Query 1619 AGAAGTCACATAGAAAACCATGATTCGGTC--G------C-C-AGTGCTGAGAGGTTTCC 1668
||||||||||||| |||| ||||||||||| | | | | | ||||||| |||||
Sbjct 1624 AGAAGTCACATAGGAAACAATGATTCGGTCTTGATGGAACGCCAATTCTGAGAGTTTTCC 1683
Query 1669 AGAAATCACAATGCATTGAACAACAAATGCTGGAATATATGATACAGTTGTGGATTTTTC 1728
|||| | | | || ||||||||||| ||||||||||||||||||||||||||||
Sbjct 1684 TGAAA-C-C---G-AT----CAACAAATGCTCGAATATATGATACAGTTGTGGATTTTTC 1733
Query 1729 TTATT 1733
|||||
Sbjct 1734 TTATT 1738
> AT1G08410.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:2646189-2649379
FORWARD LENGTH=2161
Length=2161
Score = 1295 bits (701), Expect = 0.0
Identities = 1200/1436 (84%), Gaps = 54/1436 (4%)
Strand=Plus/Plus
Query 22 ATGGGGAAGAACGAGAAA-ACATC-TCTAGGTCGAGCTTTAGTGAAGCACCATAACCATA 79
|||||||||| ||| ||| || || | | || ||| | | ||||||||||| |||||||
Sbjct 119 ATGGGGAAGAGCGA-AAAGACGTCGT-TGGGGCGATCACTCGTGAAGCACCACAACCATA 176
Query 80 TGATCCAAGAAACCAAGGAAAAAGGCAAATCCTACAAAG-ATCAACACAAGAAGGTTCTA 138
|||| |||||| |||| || |||||||| | |||| ||| ||| ||| ||||| |||||
Sbjct 177 TGATACAAGAATCCAAAGACAAAGGCAAGTACTAC-AAGAATCTACAGAAGAAAGTTCTC 235
Query 139 GAATCTGTAACCGAAGTCAGCGACATCGATGCCATCATCGAACAAGCCGAGGAAGCTGAA 198
|||||||| || || ||||| |||||||| |||||||| || ||||| ||||| || ||
Sbjct 236 GAATCTGTGACTGAGGTCAGTGACATCGACGCCATCATTGAGCAAGCTGAGGAGGCAGAG 295
Query 199 CGGCTTTTCGCGATTCATCACGA-TTCCGCAACGCCTGTT-CCTATCAATATGGACACAG 256
|| |||| | | ||| ||||| | ||| | || ||| || |||||||| | ||||||
Sbjct 296 CGTCTTTACACCATTAATCAC-AGCTCCTCCACACCT-TTGTCTATCAATCTAGACACAA 353
Query 257 GTTCGAGTTCAAGTGGTATAACAGCTAAAGAATGGAAAGACCAA-AGGATGAGAGAAGAG 315
||| || ||||||| |||| ||||| ||||||||| ||| ||| | || || ||| |||
Sbjct 354 ATTCTAGCTCAAGTGTTATAGCAGCTGAAGAATGGAGAGAGCAACA-GAAGATAGAGGAG 412
Query 316 GCTTTACATGCTAGTAGTCTTCAAGTTCCTCGAAGACCTCATTGGACACCTAAAATG-AA 374
|||||||| || |||||||||||||| ||||||||||||| ||||||||| ||||| |
Sbjct 413 GCTTTACACGCCAGTAGTCTTCAAGTACCTCGAAGACCTCCGTGGACACCTGAAATGTCA 472
Query 375 TGTGGAACAACTTGATGCTAATGAAAGACAAGCTTTTCTTACTTGGCGACGGAAACTTGC 434
|||||| |||||||||||||||||| |||||||||||| | |||||| |||| ||||
Sbjct 473 -GTGGAAGAACTTGATGCTAATGAAAAACAAGCTTTTCTAAATTGGCGCCGGATGCTTGT 531
Query 435 GAGCCTCGAGGAAAATGAAAAGCTTGTGTTGACACCATTCGAGAAGAACCTTGACATCTG 494
|||||| ||||||||||||||||| |||||||| |||||||| |||||||||||||||||
Sbjct 532 GAGCCTTGAGGAAAATGAAAAGCTAGTGTTGACTCCATTCGAAAAGAACCTTGACATCTG 591
Query 495 GAGACAACTTTGGCGAGTGCTTGAACGAAGTGATTTGATTGTTATGGTTGTTGATGCTAG 554
|||||| |||||| ||||||||||||| |||||||||||||||||||| |||||||||||
Sbjct 592 GAGACAGCTTTGGAGAGTGCTTGAACGCAGTGATTTGATTGTTATGGTAGTTGATGCTAG 651
Query 555 AGATCCTCTGTTTTACCGTTGTCCTGATCTTGAGGCATATGCACAAGAAATTGATGAGCA 614
|||||| ||||||||||| || |||||||||||||||||||| |||||||||||||||||
Sbjct 652 AGATCCACTGTTTTACCGCTGCCCTGATCTTGAGGCATATGCTCAAGAAATTGATGAGCA 711
Query 615 TaaaaaaaCAATGCTTCTGGTCAACAAGGCGGAT-TTGTTACCTTCTTATGTCAGGGAGA 673
|||||||| ||||||||| || |||||||||||| || |||||| || ||||||||||||
Sbjct 712 TAAAAAAATAATGCTTCTAGTGAACAAGGCGGATCTT-TTACCTACTGATGTCAGGGAGA 770
Query 674 AATGGGCGGAATACTTCTC-CCGCAACAATATTCTGTTCGTCTTCTGGTCAGCCAAAGCT 732
||||||| ||||| ||| | || ||||| |||||||| || ||||||||||||| ||||
Sbjct 771 AATGGGCAGAATATTTC-CGCCTTAACAACATTCTGTTTGTTTTCTGGTCAGCCATAGCT 829
Query 733 GCTACGGCTACCCTAGAAGGTAAACCCCTGAAAGAACAGTGGAGAGC-ACCTGATACCTC 791
||||| |||||||||||||||||| | ||||||| || |||||| | ||| |||| ||
Sbjct 830 GCTACAGCTACCCTAGAAGGTAAAGTCTTGAAAGAGCAATGGAGA-CAACCCGATAACT- 887
Query 792 T-CAGAAGACAGATAACCCAG-CTGTGAAAG-TATATGGAAGGGATGAGCTTTTG-GCTC 847
| |||||||||||| | |||| | | | | ||||||| || || ||||| ||| | ||
Sbjct 888 TGCAGAAGACAGATGATCCAGAC-AT-TATGATATATGGCAGAGACGAGCTGTTGAG-TC 944
Query 848 GATTAAAACTTGAGGCTCTAGAGATAGTAAAAATGAGGAAATCTAGAG--G-A---GTTT 901
| || || ||||||||| |||||| || ||| | ||||| ||||||| | | || |
Sbjct 945 GTTTGCAATTTGAGGCTCAAGAGATTGTCAAAGTAAGGAATTCTAGAGCAGCATCCGTAT 1004
Query 902 C--CGCA-AC-T-G-CTGCTGAATCA-CACCGCGAACAAGTTGTGGTTGGCTTTGTTGGG 954
| | || | | | ||| ||||| | || || || |||| |||||||| |||||||||
Sbjct 1005 CATCACAGTCATGGACTGGTGAAT-ATCAACGTGATCAAGCCGTGGTTGGATTTGTTGGG 1063
Query 955 TACCCGAATGTGGGAAAGAGTTCGACAATCAACGCGTTGGTAGGTCAGAAGCGAACAGGT 1014
||||| ||||| ||||||||||| |||||||| || ||||| ||||||||||||||||||
Sbjct 1064 TACCCAAATGTTGGAAAGAGTTCTACAATCAATGCATTGGTGGGTCAGAAGCGAACAGGT 1123
Query 1015 GTCACATCTACCCCCGGGAAAACGAAGCATTTCCAGACATTGATAATCTCCGAGGATCTA 1074
||||| |||||||| || ||||| |||||||||||||| ||||| ||||| || || ||
Sbjct 1124 GTCACCTCTACCCCAGGAAAAACAAAGCATTTCCAGACTTTGATCATCTCTGATGAGCTT 1183
Query 1075 ATGCTCTGCGATTGCCCTGGTTTAGTCTTCCCTTCATTCTCAAGCTCAAGATATGAAATG 1134
||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1184 ATGCTATGCGATTGCCCTGGTTTAGTCTTCCCTTCGTTCTCAAGCTCAAGATATGAAATG 1243
Query 1135 ATTGCTTCTGGAGTTCTTCCAATAGACCGGATGACCGAGCACCGTGAAGCTATTAAGGTT 1194
||||||||||| || ||||| || ||||||||||| |||||||||||||||||| ||||
Sbjct 1244 ATTGCTTCTGGTGTACTTCCGATTGACCGGATGACGGAGCACCGTGAAGCTATTCAGGTG 1303
Query 1195 GTGGCTGA-ACGTGTTCCTCGGCATGCCATTGAG-GATGTGTACAACATCTCTCTACCTA 1252
|||||||| | | || ||||| | || |||||| | |||||||||||| ||||| ||||
Sbjct 1304 GTGGCTGACAAG-GTCCCTCGCCGTGTAATTGAGAG-TGTGTACAACATTTCTCTTCCTA 1361
Query 1253 AACCCAAAAGCTATGAGCCTCAGTCACGCCCACCACTTGCAT-CAGAGCTTCT-AAGAAC 1310
||||||||| |||||||| |||||| ||||| || | ||| | ||||||| || || ||
Sbjct 1362 AACCCAAAACCTATGAGCGTCAGTCCCGCCCGCCTCATGC-TGCAGAGCT-CTTAAAAAG 1419
Query 1311 TTACTGC-CTTTCTCGTGGCTATGTTGCCTCTAGTGGACTACCTGATGAGAC-AAGAGCA 1368
|||||| ||| ||||||||||||||||||| ||||||||||| ||||| || || |||
Sbjct 1420 TTACTGTGCTT-CTCGTGGCTATGTTGCCTCGAGTGGACTACCGGATGAAACGAA-AGCT 1477
Query 1369 GCTAGGCAGATTCTGAAAGATTACATTGAAGGTAAGCTTCCACATTTTGCAATGCC 1424
|| |||| |||||||||||||||||||| ||||||||| ||||||| |||||||||
Sbjct 1478 GCAAGGCTGATTCTGAAAGATTACATTGGAGGTAAGCTGCCACATTATGCAATGCC 1533
Score = 69.4 bits (37), Expect = 1e-10
Identities = 73/90 (81%), Gaps = 4/90 (4%)
Strand=Plus/Plus
Query 1536 TCTTGGTCTTGATCAAGTTCTAGATGATCTGAGCTCGTTTGATCTTGCAAATGGAATTGG 1595
|| |||| ||||| | || ||||||||||||||||||||||||||||| ||||| ||
Sbjct 1654 TCCTGGTATTGATGATGTGCTAGATGATCTGAGCTCGTTTGATCTTGCCAATGGGCTTAA 1713
Query 1596 GTCTAACAAA-AA-GAAACAGCACAAGAAG 1623
|||| |||| || | |||||| ||||||
Sbjct 1714 GTCTT-CAAAGAAAGTGACAGCA-AAGAAG 1741
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 89457371190
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5