BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg481664 Length=909 Score E Sequences producing significant alignments: (Bits) Value AT1G55400.1 | Symbols: | transposable element gene | chr1:2068... 544 8e-154 AT5G03950.1 | Symbols: | transposable element gene | chr5:1066... 532 2e-150 AT5G27590.1 | Symbols: | transposable element gene | chr5:9738... 521 4e-147 AT5G44313.1 | Symbols: | transposable element gene | chr5:1785... 516 2e-145 AT4G04495.1 | Symbols: | transposable element gene | chr4:2236... 507 1e-142 AT5G40110.1 | Symbols: | transposable element gene | chr5:1604... 499 2e-140 AT2G17460.1 | Symbols: | transposable element gene | chr2:7582... 499 2e-140 AT3G29777.1 | Symbols: | transposable element gene | chr3:1165... 496 2e-139 AT3G28800.1 | Symbols: | transposable element gene | chr3:1081... 490 1e-137 AT1G30980.1 | Symbols: | transposable element gene | chr1:1104... 488 4e-137 AT3G59860.1 | Symbols: | transposable element gene | chr3:2211... 472 4e-132 AT2G16832.1 | Symbols: | transposable element gene | chr2:7293... 472 4e-132 AT1G17900.1 | Symbols: | transposable element gene | chr1:6157... 470 1e-131 AT5G28637.1 | Symbols: | transposable element gene | chr5:1064... 448 6e-125 AT1G32505.1 | Symbols: | transposable element gene | chr1:1175... 427 8e-119 AT3G45120.1 | Symbols: | transposable element gene | chr3:1651... 254 1e-66 AT2G16820.1 | Symbols: | transposable element gene | chr2:7290... 237 1e-61 AT4G05584.1 | Symbols: | transposable element gene | chr4:2864... 222 4e-57 AT4G05583.2 | Symbols: | transposable element gene | chr4:2860... 130 2e-29 AT2G06600.1 | Symbols: | transposable element gene | chr2:2639... 73.1 4e-12 AT5G28487.1 | Symbols: | transposable element gene | chr5:1044... 71.3 2e-11 AT2G05490.1 | Symbols: | transposable element gene | chr2:2006... 71.3 2e-11 AT2G12150.1 | Symbols: | transposable element gene | chr2:4884... 71.3 2e-11 AT1G45070.1 | Symbols: | transposable element gene | chr1:1703... 71.3 2e-11 AT3G28110.1 | Symbols: | transposable element gene | chr3:1046... 69.4 6e-11 AT2G16150.1 | Symbols: | transposable element gene | chr2:7009... 69.4 6e-11 AT3G42626.1 | Symbols: | transposable element gene | chr3:1471... 65.8 7e-10 AT1G29075.1 | Symbols: | transposable element gene | chr1:1015... 65.8 7e-10 > AT1G55400.1 | Symbols: | transposable element gene | chr1:20684233-20684965 REVERSE LENGTH=733 Length=733 Score = 544 bits (294), Expect = 8e-154 Identities = 437/503 (87%), Gaps = 22/503 (4%) Strand=Plus/Minus Query 422 TGGT-TGAGAATGACGTCCTCCTCAACATTTCCTATTCCATATTCTTCAATAATTAAATC 480 |||| |||||||||||| |||||||||||||||||||||||||||||||| ||||| ||| Sbjct 669 TGGTATGAGAATGACGTTCTCCTCAACATTTCCTATTCCATATTCTTCAACAATTACATC 610 Query 481 GTTCCACTTGTTGTAATCGTAATCTTCGCCACTGCCTTCACTACCGTCTATAGTAGGATC 540 |||||||||||||||||| |||||||||||| | | ||||||||| || ||||||||||| Sbjct 609 GTTCCACTTGTTGTAATCATAATCTTCGCCATTACTTTCACTACCATCAATAGTAGGATC 550 Query 541 GAGGGTACTTCCCCCCATAGATCCATCATCACCCTGATAATCATCATACCCAGCACCATC 600 ||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct 549 GAGGGTACTTCCCCCCATAGATCCATCGTCACCCTGATAATCATCATACCCATCACCATC 490 Query 601 TTCGTTGTCCTCCTCCTCTTCTTCATCCTCATCTGTTTTATCGTCTTCAACGTCGTCTTG 660 |||||||||| |||||||||| ||||||||||||||||||||||||||| |||||||| Sbjct 489 TTCGTTGTCCCCCTCCTCTTC---ATCCTCATCTGTTTTATCGTCTTCAACATCGTCTTG 433 Query 661 CTCATCTACAGCCTCATTATTTCCATCTACATTTGAAACACTCCCACACACACGGTAACT 720 ||||||||| |||||||||||| |||| ||||||||||||| ||| || | | | Sbjct 432 CTCATCTACGGCCTCATTATTTTCATCAACATTTGAAACACGGTCACTTTCA-GC-ATCG 375 Query 721 CTCACCATCG-GTCCTAGGGACAGTATTCCCGAGTGCCTTGACGGTTGTAATGAAAGAGA 779 ||||||| | ||||||| |||| ||||| |||||| ||||||||||||||||||||||| Sbjct 374 -TCACCAT-GAGTCCTAGAGACATTATTCTCGAGTGTCTTGACGGTTGTAATGAAAGAGA 317 Query 780 CAAACAAGGTGACACTAGGATCCCCACCACGAATCA-AAA-A-C-T---CAT------TT 826 |||||||| ||| | ||||| || ||||||||||| ||| | | | || || Sbjct 316 CAAACAAGTTGAGAGAAGGATACCTACCACGAATCATAAAGAACGTATTCAACCCCACTT 257 Query 827 GATTGTCAATGTATACAGGAGGGCGTTTACTTTCTATCATCACTGACATCTTTCCCGGCA 886 || |||||||||| |||||| |||||||| | |||||||||||| |||||| |||||||| Sbjct 256 GACTGTCAATGTAGACAGGAAGGCGTTTAGTATCTATCATCACTAACATCTCTCCCGGCA 197 Query 887 TCCAGTAACTAATTATTGGATTG 909 |||||||||||||||| |||||| Sbjct 196 TCCAGTAACTAATTATGGGATTG 174 > AT5G03950.1 | Symbols: | transposable element gene | chr5:1066206-1066964 FORWARD LENGTH=759 Length=759 Score = 532 bits (288), Expect = 2e-150 Identities = 441/511 (86%), Gaps = 26/511 (5%) Strand=Plus/Minus Query 422 TGGT-TGAGAATGACGTCCTCCTCAACATTTCCTATTCCATATTCTTCAATAATTAAATC 480 |||| |||||||||||| |||||||||||| ||||||||||||||||| | ||||| ||| Sbjct 603 TGGTGTGAGAATGACGTTCTCCTCAACATTCCCTATTCCATATTCTTCTACAATTACATC 544 Query 481 GTTCCACTTGTTGTAATCGTAATCTTCGCCACTGCCTTCACTACCGTCTATAGTAGGATC 540 |||||||||||||||||| |||||||||||||| | ||||||||| || ||||||||||| Sbjct 543 GTTCCACTTGTTGTAATCATAATCTTCGCCACTACTTTCACTACCATCAATAGTAGGATC 484 Query 541 GAGGGTACTTCCCCCCATAGATCCATCATCACCCTGATAATCATCATACCCAGCACCATC 600 ||||||||||||||| ||||||||||| |||||||||||||||||||||||| ||| || Sbjct 483 GAGGGTACTTCCCCCTATAGATCCATCGTCACCCTGATAATCATCATACCCACCACGATA 424 Query 601 TTCGTTGTCCTCCTCCTCTTCTTCATCCTCATCTGTTTTATCGTCTTCAACGTCGTCTTG 660 |||||||| | || |||| ||||||||||||| |||||||||||||||| |||||||||| Sbjct 423 TTCGTTGT-C-CC-CCTCCTCTTCATCCTCATTTGTTTTATCGTCTTCATCGTCGTCTTG 367 Query 661 CTCATCTACAGCCTCATTATTTCCATCTACATTTGAAACACTCCCACACACACGGTAACT 720 ||||||||| |||||||||||| |||| |||||||||||||| |||| ||||||||||| Sbjct 366 CTCATCTACGGCCTCATTATTTTCATCAACATTTGAAACACTATCACATACACGGTAACT 307 Query 721 CTCA-C--CAT---C--G-GTCCTAGGGACAGTATTCCCGAGTGCCTTGACGGTTGTAAT 771 ||| | ||| | | ||||||| |||| ||||| |||||| ||||||||||||||| Sbjct 306 TTCAGCATCATCACCATGAGTCCTAGAGACATTATTCTCGAGTGTCTTGACGGTTGTAAT 247 Query 772 GAAAGAGACAAACAAGGTGACACTAGGATCCCCACCACGAATCAAAAA---C-T--C-AT 824 |||||||||||||||| ||| | ||||| || ||||||||| ||||| | | | | Sbjct 246 GAAAGAGACAAACAAGTTGAGAGAAGGATACCGACCACGAATTAAAAAGAACGTATCCAA 187 Query 825 ------TTGATTGTCAATGTATACAGGAGGGCGTTTACTTTCTATCATCACTGACATCTT 878 |||| |||||||||| ||||||||||||||| | |||||||||||| |||||| Sbjct 186 CCCCACTTGACTGTCAATGTAGACAGGAGGGCGTTTAGTATCTATCATCACTAACATCTC 127 Query 879 TCCCGGCATCCAGTAACTAATTATTGGATTG 909 |||||||||||||||||||||||| |||||| Sbjct 126 TCCCGGCATCCAGTAACTAATTATGGGATTG 96 > AT5G27590.1 | Symbols: | transposable element gene | chr5:9738492-9740473 REVERSE LENGTH=963 Length=963 Score = 521 bits (282), Expect = 4e-147 Identities = 434/504 (86%), Gaps = 24/504 (5%) Strand=Plus/Minus Query 422 TGGT-TGAGAATGACGTCCTCCTCAACATTTCCTATTCCATATTCTTCAATAATTAAATC 480 |||| |||||||||||| |||||||||||| ||||||||||||||||| | ||||| ||| Sbjct 669 TGGTGTGAGAATGACGTTCTCCTCAACATTCCCTATTCCATATTCTTCTACAATTACATC 610 Query 481 GTTCCACTTGTTGTAATCGTAATCTTCGCCACTGCCTTCACTACCGTCTATAGTAGGATC 540 |||||||||||||||||| |||||||||||||| | ||||||||| || ||||||||||| Sbjct 609 GTTCCACTTGTTGTAATCATAATCTTCGCCACTACTTTCACTACCATCAATAGTAGGATC 550 Query 541 GAGGGTACTTCCCCCCATAGATCCATCATCACCCTGATAATCATCATACCCAGCACCATC 600 ||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct 549 GAGGGTACTTCCCCCCATAGATCCATCGTCACCCTGATAATCATCATACCCATCACCATC 490 Query 601 TTCGTTGTCCTCC-TCCTCTTCTTCATCCTCATCTGTTTTATCGTCTTCAACGTCGTCTT 659 |||||| ||| || | | ||| |||||||||||||||||||||||||||||||||||||| Sbjct 489 TTCGTTATCC-CCAT-C-CTT-TTCATCCTCATCTGTTTTATCGTCTTCAACGTCGTCTT 434 Query 660 GCTCATCTACAGCCTCATTATTTCCATCTACATTTGAAACACTCCCACACACACGGTAAC 719 |||||| ||| |||||||||||| |||| ||||||||||||| ||| || | | | Sbjct 433 GCTCATATACGGCCTCATTATTTTCATCAACATTTGAAACACGGTCACTTTCA-GC-ATC 376 Query 720 TCTCACCATCG-GTCCTAGGGACAGTATTCCCGAGTGCCTTGACGGTTGTAATGAAAGAG 778 ||||||| | ||||||| |||| ||||| ||||| ||||||||||||||| |||||| Sbjct 375 G-TCACCAT-GAGTCCTAGAGACATTATTCTTGAGTGTCTTGACGGTTGTAATAAAAGAG 318 Query 779 ACAAACAAGGTGACACTAGGATCCCCACCACGAATCA-AAA-A-C-T---CAT------T 825 ||||||||| ||| | ||||| || ||||||||||| ||| | | | || | Sbjct 317 ACAAACAAGTTGAGAGAAGGATACCTACCACGAATCATAAAGAACGTATTCAACCCCACT 258 Query 826 TGATTGTCAATGTATACAGGAGGGCGTTTACTTTCTATCATCACTGACATCTTTCCCGGC 885 ||| |||||||||| ||||||||||||||| | |||||||||||| |||||| ||||||| Sbjct 257 TGACTGTCAATGTAGACAGGAGGGCGTTTAGTATCTATCATCACTAACATCTCTCCCGGC 198 Query 886 ATCCAGTAACTAATTATTGGATTG 909 ||||||||||||||||| |||||| Sbjct 197 ATCCAGTAACTAATTATGGGATTG 174 > AT5G44313.1 | Symbols: | transposable element gene | chr5:17851014-17851727 FORWARD LENGTH=714 Length=714 Score = 516 bits (279), Expect = 2e-145 Identities = 433/504 (86%), Gaps = 24/504 (5%) Strand=Plus/Minus Query 422 TGGT-TGAGAATGACGTCCTCCTCAACATTTCCTATTCCATATTCTTCAATAATTAAATC 480 |||| |||||||||||| |||||||||||| ||||||||||||||||| | ||||| ||| Sbjct 558 TGGTGTGAGAATGACGTTCTCCTCAACATTCCCTATTCCATATTCTTCTACAATTACATC 499 Query 481 GTTCCACTTGTTGTAATCGTAATCTTCGCCACTGCCTTCACTACCGTCTA-TAGTAGGAT 539 ||||||||||| |||||| ||||||||||||| | ||||||||| || | ||||||||| Sbjct 498 GTTCCACTTGTCGTAATCATAATCTTCGCCACAACTTTCACTACCATC-ATTAGTAGGAT 440 Query 540 CGAGGGTACTTCCCCCCATAGATCCATCATCACCCTGATAATCATCATACCCAGCACCAT 599 |||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| Sbjct 439 CGAGGGTACTTCCCCCCATAGATCCATCGTCACCCTGATAATCATCATACCCATCACCAT 380 Query 600 CTTCGTTGTCCTCCTCCTCTTCTTCATCCTCATCTGTTTTATCGTCTTCAACGTCGTCTT 659 ||||||||| | || |||| |||||||||||||||||||||||||||||||||||||||| Sbjct 379 CTTCGTTGT-C-CC-CCTCCTCTTCATCCTCATCTGTTTTATCGTCTTCAACGTCGTCTT 323 Query 660 GCTCATCTACAGCCTCATTATTTCCATCTACATTTGAAACACTCCCACACACACGGTAAC 719 |||||||||| |||||||||||| |||| ||||||||||||| ||| || | | | Sbjct 322 GCTCATCTACGGCCTCATTATTTTCATCAACATTTGAAACACGGTCACTTTCA-GC-ATC 265 Query 720 TCTCACCATCG-GTCCTAGGGACAGTATTCCCGAGTGCCTTGACGGTTGTAATGAAAGAG 778 ||| ||| | | ||||| |||| |||||| ||||| |||||||||||||||||||||| Sbjct 264 A-TCATCAT-GAGCCCTAGAGACATTATTCCTGAGTGTCTTGACGGTTGTAATGAAAGAG 207 Query 779 ACAAACAAGGTGACACTAGGATCCCCACCACGAATCA-AAA-A-C-T---CA--T----T 825 ||||||||| ||| | ||||| || ||||||||||| ||| | | | || | | Sbjct 206 ACAAACAAGTTGAGAGAAGGATACCTACCACGAATCATAAAGAACGTATTCAACTCCACT 147 Query 826 TGATTGTCAATGTATACAGGAGGGCGTTTACTTTCTATCATCACTGACATCTTTCCCGGC 885 ||| |||||||||| ||||||||||||||| | |||||||||||| |||||| || ||| Sbjct 146 TGACTGTCAATGTAGACAGGAGGGCGTTTAGTATCTATCATCACTAACATCTCTCTGGGC 87 Query 886 ATCCAGTAACTAATTATTGGATTG 909 ||||||||||||||||| |||||| Sbjct 86 ATCCAGTAACTAATTATGGGATTG 63 Score = 152 bits (82), Expect = 5e-36 Identities = 97/104 (93%), Gaps = 2/104 (2%) Strand=Plus/Minus Query 195 CAATCTATAGTGTACGTACATTGGTACAAACCATGTTGACACGTACGTCTTGGAGTCACC 254 ||||||||||||||||||||||||||||||| |||||||||| ||| |||||||||||| Sbjct 713 CAATCTATAGTGTACGTACATTGGTACAAACGATGTTGACACATACTTCTTGGAGTCACA 654 Query 255 GT-TGGTGTACGGTCACCCGAATGAGAAATGTTATCTCCGCCAG 297 | |||||||||||||||||| |||||||||||||||||||||| Sbjct 653 -TCTGGTGTACGGTCACCCGAGTGAGAAATGTTATCTCCGCCAG 611 > AT4G04495.1 | Symbols: | transposable element gene | chr4:2236004-2237046 REVERSE LENGTH=1043 Length=1043 Score = 507 bits (274), Expect = 1e-142 Identities = 436/509 (86%), Gaps = 32/509 (6%) Strand=Plus/Minus Query 426 TGAGAATGACGTCCTCCTCAACATTTCCTATTCCATATTCTTCAATAATTAAATCGTTCC 485 ||| ||||| ||||||||||||||| ||||||||||||||||| | ||||| |||||||| Sbjct 658 TGAAAATGAAGTCCTCCTCAACATTCCCTATTCCATATTCTTCTACAATTACATCGTTCC 599 Query 486 ACTTGTTGTAATCGTAATCTTCGCCACTGCCTTCACTACCGTCTATAGTAGGATCGAGGG 545 ||||||||||||| |||||||||||||| | ||||||||| || |||||||||||||||| Sbjct 598 ACTTGTTGTAATCATAATCTTCGCCACTACTTTCACTACCATCGATAGTAGGATCGAGGG 539 Query 546 TACTTCCCCCCATAGATCCATCA-TCACCCTGATAATCATCATACCCAGCACCATCTTCG 604 ||||| | ||||||||||||| | |||||||||||||||||||||||| |||||| |||| Sbjct 538 TACTT-CTCCCATAGATCCAT-AGTCACCCTGATAATCATCATACCCATCACCATTTTCG 481 Query 605 TTGTCCTCCTCCTCTTCTTCATCCTCATCTGTTTTATCGTCTTCAACGTCGTCTTGCTCA 664 |||| | || |||| | |||||| |||||||||||| ||||||||||||||||||||||| Sbjct 480 TTGT-C-CC-CCTCCTATTCATCTTCATCTGTTTTACCGTCTTCAACGTCGTCTTGCTCA 424 Query 665 TCTA-CAGCCTCATTATTTCCATCTACATTTGAAACACTCCCACACACACGGT-A----- 717 |||| | |||||||||||| |||| |||||||||||||| |||||||| ||| | Sbjct 423 TCTAGC-GCCTCATTATTTTCATCAACATTTGAAACACTATCACACACATGGTCACTTTC 365 Query 718 A-C-TC-TCACCATCG-GTCCTAGGGACAGTATTCCCGAGTGCCTTGACGGTTGTAATGA 773 | | || ||||||| | ||||||| |||| |||| ||||||| ||||||||||||||||| Sbjct 364 AGCATCGTCACCAT-GAGTCCTAGAGACATTATTTCCGAGTGTCTTGACGGTTGTAATGA 306 Query 774 AAGAGACAAACAAGGTGACACTAGGATCCCCACCACGAATCAAAAA---C-T--C-AT-- 824 |||||||||||||| | | | | ||| |||||||||||||||||| | | | | Sbjct 305 AAGAGACAAACAAGTTAAGAAAAAGATACCCACCACGAATCAAAAAGAACGTATCTAACC 246 Query 825 ----TTGATTGTCAATGTATACAGGAGGGCGTTTACTTTCTATCATCACTGACATCTTTC 880 |||| |||||||||| ||||||||||||||| | ||||||||||||||||||| || Sbjct 245 CCACTTGACTGTCAATGTAGACAGGAGGGCGTTTAGTATCTATCATCACTGACATCTCTC 186 Query 881 CCGGCATCCAGTAACTAATTATTGGATTG 909 |||||||||||||||||||||| |||||| Sbjct 185 CCGGCATCCAGTAACTAATTATGGGATTG 157 Score = 442 bits (239), Expect = 3e-123 Identities = 274/291 (94%), Gaps = 2/291 (1%) Strand=Plus/Minus Query 1 TCATACGATGTGATTTTGAAACATTCTGAATTCTTGACAACTTGAGCTGTCAAATGCCAT 60 ||||||||||||||||||||||||||||||||| |||| |||||||| |||||||| ||| Sbjct 1030 TCATACGATGTGATTTTGAAACATTCTGAATTCCTGACGACTTGAGCAGTCAAATGTCAT 971 Query 61 GGACAAGTATCATCAACGCAGACCATCTCCAATCTTGTAGGACATGACCTACGTTGCTTG 120 ||||| |||||||||||||| || ||||||||||||||||||||||||||| ||||||| Sbjct 970 GGACAGGTATCATCAACGCATACTATCTCCAATCTTGTAGGACATGACCTAGGTTGCTTA 911 Query 121 TAGCAAAAGCATTGTTTGATTGCGAGATAAGACATTGTTTGTTGTATGACTTTTCTGTTC 180 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 910 TAGCAAAAACATTGTTTGATTGCGAGATAAGACATTGTTTGTTGTATGACTTTTCTGTTC 851 Query 181 TTAAAAACACT-CTCCAATCTATAGTGTACGTACATTGGTACAAACCATGTTGACACGTA 239 ||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 850 TTAAAAATACTCCT-CAATCTATAGTGTACGTACATTGGTACAAACCATGTTGACACGTA 792 Query 240 CGTCTTGGAGTCACCGTTGGTGTACGGTCACCCGAATGAGAAATGTTATCT 290 | |||||||||||| | |||||||||||||||||| ||||||||||||||| Sbjct 791 CTTCTTGGAGTCACAGCTGGTGTACGGTCACCCGAGTGAGAAATGTTATCT 741 Score = 89.8 bits (48), Expect = 4e-17 Identities = 54/57 (95%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 369 GTGTACGTACATTGGTACAAACCATGTTGACACGTACGTCTTGGAGTCACCGTTGGT 425 ||||||||||||||||||||||||||||||||||||| |||||||||||| | |||| Sbjct 827 GTGTACGTACATTGGTACAAACCATGTTGACACGTACTTCTTGGAGTCACAGCTGGT 771 > AT5G40110.1 | Symbols: | transposable element gene | chr5:16049934-16050776 FORWARD LENGTH=843 Length=843 Score = 499 bits (270), Expect = 2e-140 Identities = 436/512 (85%), Gaps = 28/512 (5%) Strand=Plus/Minus Query 422 TGGT-TGAGAATGACGTCCTCCTCAACATTTCCTATTCCATATTCTTCAATAATTAAATC 480 |||| |||||||||||| ||| |||||||| ||||||||||||||||| | ||||| ||| Sbjct 603 TGGTGTGAGAATGACGTTCTCGTCAACATTCCCTATTCCATATTCTTCTACAATTACATC 544 Query 481 GTTCCACTTGTTGTAATCGTAATCTTCGCCACTGCCTTCACTACCGTCTATAGTAGGATC 540 |||||||||||||||||| |||||||||||||| | ||||||||| || ||||||||||| Sbjct 543 GTTCCACTTGTTGTAATCATAATCTTCGCCACTACTTTCACTACCATCAATAGTAGGATC 484 Query 541 GAGGGTACTTCCCCCCATAGATCCATCATCACCCTGATAATCATCATACCCAGCACCATC 600 ||||||||||||||| ||||||||||| |||||||||||||||||||||||| ||||||| Sbjct 483 GAGGGTACTTCCCCCTATAGATCCATCGTCACCCTGATAATCATCATACCCACCACCATC 424 Query 601 TTCGTTGTCCTCCTCCTCTTCTTCATCCTCATCTGTTTTATCGTCTTCAACGTCGTCTTG 660 || ||||| | || |||| ||||||||||||| |||||||||||||||| ||||||||| Sbjct 423 TTTGTTGT-C-CC-CCTCCTCTTCATCCTCATTTGTTTTATCGTCTTCATCGTCGTCTTT 367 Query 661 CTCATCTACAGCCTCATTATTTCCATCTACATTTGAAACACTCCCACACACACGGT-A-- 717 ||||||||| |||||||||||| |||| |||||||||||||| |||| ||||||| | Sbjct 366 CTCATCTACGGCCTCATTATTTTCATCAACATTTGAAACACTATCACATACACGGTCACT 307 Query 718 ---A-C-TC-TCACCATCG-GTCCTAGGGACAGTATTCCCGAGTGCCTTGACGGTTGTAA 770 | | || ||||||| | ||||||| |||| |||| || ||| |||||||||||||| Sbjct 306 TTCAGCATCATCACCAT-GAGTCCTAGAGACATTATTATCGGGTGTCTTGACGGTTGTAA 248 Query 771 TGAAAGAGACAAACAAGGTGACACTAGGATCCCCACCACGAATCAAAAA---C-T--C-A 823 |||||||||||||||| ||| | ||||| || ||||||||| ||||| | | | | Sbjct 247 TGAAAGAGACAAACAAATTGAGAGAAGGATACCGACCACGAATTAAAAAGAACGTATCCA 188 Query 824 T------TTGATTGTCAATGTATACAGGAGGGCGTTTACTTTCTATCATCACTGACATCT 877 |||| |||||||||| ||||||||||||||| | ||||||| |||| |||||| Sbjct 187 ACCCCACTTGACTGTCAATGTAGACAGGAGGGCGTTTAGTATCTATCAGCACTAACATCT 128 Query 878 TTCCCGGCATCCAGTAACTAATTATTGGATTG 909 |||||||||||||||||||||||| |||||| Sbjct 127 CTCCCGGCATCCAGTAACTAATTATGGGATTG 96 > AT2G17460.1 | Symbols: | transposable element gene | chr2:7582174-7583230 FORWARD LENGTH=1057 Length=1057 Score = 499 bits (270), Expect = 2e-140 Identities = 435/509 (85%), Gaps = 33/509 (6%) Strand=Plus/Minus Query 426 TGAGAATGACGTCCTCCTCAACATTTCCTATTCCATATTCTTCAATAATTAAATCGTTCC 485 |||||||||||| |||||||||||| ||||||||||||||||| | |||| |||||||| Sbjct 672 TGAGAATGACGTTCTCCTCAACATTCCCTATTCCATATTCTTCTACAATTTCATCGTTCC 613 Query 486 ACTTGTTGTAATCGTAATCTTCGCCACTGCCTTCACTACCGTCTATAGTAGGATCGAGGG 545 ||||||||||||| |||||||||||||| | ||||||||| || ||||||||||||| || Sbjct 612 ACTTGTTGTAATCATAATCTTCGCCACTACTTTCACTACCATCAATAGTAGGATCGATGG 553 Query 546 TACTTCCCCCCATAGATCCATCATCACCCTGATAATCATCATACCCAGCACCATCTTCGT 605 ||||| |||||||||||||||| |||||||||||||||||||||||| |||||||||||| Sbjct 552 TACTT-CCCCCATAGATCCATCGTCACCCTGATAATCATCATACCCATCACCATCTTCGT 494 Query 606 TGTCCTCCTCCTCTTCTTCATCCTCATCTGTTTTATCGTCTTCAA-CGTCGTCTTGCTCA 664 ||| | || || | ||||||||||||||||||||||||||||||| | ||||||| || | Sbjct 493 TGT-C-CC-CC-CATCTTCATCCTCATCTGTTTTATCGTCTTCAATC-TCGTCTTACTAA 439 Query 665 TCTACAGCCTCATTATTTCCATCTACATTTGAAACACTCCCACACACACGGT-A-----A 718 |||| |||||||||||| |||| |||||| ||||||| |||||||||||| | | Sbjct 438 TCTATGGCCTCATTATTTTCATCAACATTTAAAACACTATCACACACACGGTCACTTTCA 379 Query 719 -C-TC-TCACCATCG-GTCCTAGGGACAGTATTCCCGAGTGCCTTGACGGTTGTAATGAA 774 | || ||||||| | ||||||| |||| |||||||||||| |||||||||||||||||| Sbjct 378 GCATCGTCACCAT-GAGTCCTAGAGACATTATTCCCGAGTGTCTTGACGGTTGTAATGAA 320 Query 775 AGAGACAAACAAGGTGACACTAGGATCCCCACCACGAATCAAAAA---C-T--C--A--- 823 ||||||||||||| ||| | ||||| |||||||||||| ||||| | | | | Sbjct 319 AGAGACAAACAAGTTGAGAGAAGGATACCCACCACGAATAAAAAAAATCGTATCCCACCC 260 Query 824 T---TTGATTGTCAATGTATACAGGAGGGCGTTTACTTTCTATCATCACTGACATCTTTC 880 | |||| |||||||||| ||||||||||||||| | |||||||||||| |||||| || Sbjct 259 TCACTTGACTGTCAATGTAGACAGGAGGGCGTTTAGTATCTATCATCACTAACATCTCTC 200 Query 881 CCGGCATCCAGTAACTAATTATTGGATTG 909 ||| ||||||||||||||||| |||||| Sbjct 199 CCGT-ATCCAGTAACTAATTATGGGATTG 172 Score = 460 bits (249), Expect = 8e-129 Identities = 282/298 (95%), Gaps = 2/298 (1%) Strand=Plus/Minus Query 1 TCATACGATGTGATTTTGAAACATTCTGAATTCTTGACAACTTGAGCTGTCAAATGCCAT 60 ||||||||||||||||||||| |||||||||||||||| |||||||| |||||||| ||| Sbjct 1044 TCATACGATGTGATTTTGAAATATTCTGAATTCTTGACGACTTGAGCAGTCAAATGTCAT 985 Query 61 GGACAAGTATCATCAACGCAGACCATCTCCAATCTTGTAGGACATGACCTACGTTGCTTG 120 |||||||||||||||||||| |||||| |||||||||||||| |||||||| |||||||| Sbjct 984 GGACAAGTATCATCAACGCATACCATCACCAATCTTGTAGGATATGACCTAGGTTGCTTG 925 Query 121 TAGC-AAAAGCATTGTTTGATTGCGAGATAAGACATTGTTTGTTGTATGACTTTTCTGTT 179 |||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 924 TAGCAAAAAG-ATTGTTTGATTGCGAGATAAGACATTGTTTGTTGTATGACTTTTCTGTT 866 Query 180 CTTAAAAACACTCTCCAATCTATAGTGTACGTACATTGGTACAAACCATGTTGACACGTA 239 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 865 CTTAAAAACACTCTCCAATCTATAGTGTACGTACATTGGTACAAACCATGTTGACACATA 806 Query 240 CGTCTTGGAGTCACCGTTGGTGTACGGTCACCCGAATGAGAAATGTTATCTCCGCCAG 297 | |||||||||||| | ||||||||||||||||| |||||||||||||||||||||| Sbjct 805 CTTCTTGGAGTCACAGCTGGTGTACGGTCACCCGGGTGAGAAATGTTATCTCCGCCAG 748 Score = 84.2 bits (45), Expect = 2e-15 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 369 GTGTACGTACATTGGTACAAACCATGTTGACACGTACGTCTTGGAGTCACCGTTGGT 425 ||||||||||||||||||||||||||||||||| ||| |||||||||||| | |||| Sbjct 841 GTGTACGTACATTGGTACAAACCATGTTGACACATACTTCTTGGAGTCACAGCTGGT 785 > AT3G29777.1 | Symbols: | transposable element gene | chr3:11658757-11659845 REVERSE LENGTH=1089 Length=1089 Score = 496 bits (268), Expect = 2e-139 Identities = 433/508 (85%), Gaps = 30/508 (6%) Strand=Plus/Minus Query 426 TGAGAATGACGTCCTCCTCAACATTTCCTATTCCATATTCTTCAATAATTAAATCGTTCC 485 |||||||||||| |||||||||||| |||||||||||||||| | |||| |||||||| Sbjct 675 TGAGAATGACGTTCTCCTCAACATTCCCTATTCCATATTCTTTTACAATTTCATCGTTCC 616 Query 486 ACTTGTTGTAATCGTAATCTTCGCCACTGCCTTCACTACCGTCTATAGTAGGATCGAGGG 545 ||||||||||||| |||||||||||||| | ||||||||| || ||||||||||||| || Sbjct 615 ACTTGTTGTAATCATAATCTTCGCCACTACTTTCACTACCATCAATAGTAGGATCGATGG 556 Query 546 TACTTCCCCCCATAGATCCATCATCACCCTGATAATCATCATACCCAGCACCATCTTCGT 605 ||||| |||||||||||||||| |||||||||||||||||||||||| |||||||||||| Sbjct 555 TACTT-CCCCCATAGATCCATCGTCACCCTGATAATCATCATACCCATCACCATCTTCGT 497 Query 606 TGTCCTCCTCCTCTTCTTCATCCTCATCTGTTTTATCGTCTTCAA-CGTCGTCTTGCTCA 664 ||| | || || | ||||||||||||||||||||||||||||||| | |||||||||| | Sbjct 496 TGT-C-CC-CC-CATCTTCATCCTCATCTGTTTTATCGTCTTCAATC-TCGTCTTGCTAA 442 Query 665 TCTACAGCCTCATTATTTCCATCTACATTTGAAACACTCCCACACACACGGTAACTCTCA 724 |||| |||||||||||| |||| |||||| ||||||| |||||||||||| ||| ||| Sbjct 441 TCTATGGCCTCATTATTTTCATCAACATTTAAAACACTATCACACACACGGTCACTTTCA 382 Query 725 CCATCG-------G--TCCTAGGGACAGTATTCCCGAGTGCCTTGACGGTTGTAATGAAA 775 ||||| | |||||| |||| |||||||||||| ||||||||||||||||||| Sbjct 381 GCATCGTCACCATGACTCCTAGAGACATTATTCCCGAGTGTCTTGACGGTTGTAATGAAA 322 Query 776 GAGACAAACAAGGTGACACTAGGATCCCCACCACGAATCAAAAA---C-T--C--A---T 824 |||||||||||| ||| | ||||| |||||||||||| ||||| | | | | | Sbjct 321 GAGACAAACAAGTTGAGAGAAGGATACCCACCACGAATAAAAAAAATCGTATCCCACCCT 262 Query 825 ---TTGATTGTCAATGTATACAGGAGGGCGTTTACTTTCTATCATCACTGACATCTTTCC 881 |||| | |||||||| ||||||||||||||| | |||||||||||| |||||| ||| Sbjct 261 CACTTGACTCTCAATGTAGACAGGAGGGCGTTTAGTATCTATCATCACTAACATCTCTCC 202 Query 882 CGGCATCCAGTAACTAATTATTGGATTG 909 ||| ||||||||||||||||| |||||| Sbjct 201 CGGTATCCAGTAACTAATTATGGGATTG 174 Score = 455 bits (246), Expect = 4e-127 Identities = 281/298 (94%), Gaps = 2/298 (1%) Strand=Plus/Minus Query 1 TCATACGATGTGATTTTGAAACATTCTGAATTCTTGACAACTTGAGCTGTCAAATGCCAT 60 ||||||||||||||||||||| |||||||||||||||| |||||||| |||||||| ||| Sbjct 1046 TCATACGATGTGATTTTGAAATATTCTGAATTCTTGACGACTTGAGCAGTCAAATGTCAT 987 Query 61 GGACAAGTATCATCAACGCAGACCATCTCCAATCTTGTAGGACATGACCTACGTTGCTTG 120 |||||||||||||||||||| |||||| |||||||||||||| |||||||| |||||||| Sbjct 986 GGACAAGTATCATCAACGCATACCATCACCAATCTTGTAGGATATGACCTAGGTTGCTTG 927 Query 121 TAGC-AAAAGCATTGTTTGATTGCGAGATAAGACATTGTTTGTTGTATGACTTTTCTGTT 179 |||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 926 TAGCAAAAAG-ATTGTTTGATTGCGAGATAAGACATTGTTTGTTGTATGACTTTTCTGTT 868 Query 180 CTTAAAAACACTCTCCAATCTATAGTGTACGTACATTGGTACAAACCATGTTGACACGTA 239 |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| || Sbjct 867 CTTAAAAACACTCTTCAATCTATAGTGTACGTACATTGGTACAAACCATGTTGACACATA 808 Query 240 CGTCTTGGAGTCACCGTTGGTGTACGGTCACCCGAATGAGAAATGTTATCTCCGCCAG 297 | |||||||||||| | ||||||||||||||||| |||||||||||||||||||||| Sbjct 807 CTTCTTGGAGTCACAGCTGGTGTACGGTCACCCGGGTGAGAAATGTTATCTCCGCCAG 750 Score = 84.2 bits (45), Expect = 2e-15 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 369 GTGTACGTACATTGGTACAAACCATGTTGACACGTACGTCTTGGAGTCACCGTTGGT 425 ||||||||||||||||||||||||||||||||| ||| |||||||||||| | |||| Sbjct 843 GTGTACGTACATTGGTACAAACCATGTTGACACATACTTCTTGGAGTCACAGCTGGT 787 > AT3G28800.1 | Symbols: | transposable element gene | chr3:10817053-10818113 REVERSE LENGTH=1061 Length=1061 Score = 490 bits (265), Expect = 1e-137 Identities = 434/510 (85%), Gaps = 33/510 (6%) Strand=Plus/Minus Query 426 TGAGAATGACGTCCTCCTCAACATTTCCTATTCCATATTCTTCAATAATTAAATCGTTCC 485 |||||||||||| |||||||||||| |||||| |||||||||| | | ||| |||||||| Sbjct 676 TGAGAATGACGTTCTCCTCAACATTCCCTATTTCATATTCTTCTACAGTTACATCGTTCC 617 Query 486 ACTTGTTGTAATCGTAATCTTCGCCACTGCCTTCACTACCGTCTATAGTAGGATCGAGGG 545 |||| |||||||| |||||||||||||| | ||||||||| || |||||||||||||||| Sbjct 616 ACTTATTGTAATCATAATCTTCGCCACTACTTTCACTACCATCAATAGTAGGATCGAGGG 557 Query 546 TACTTCCCCCCATAGATCCATCATCACCCTGATAATCATCATACCCAGCACCATCTTCGT 605 |||||||| ||||||||||||| |||||||||||||||||||||||| ||| |||||||| Sbjct 556 TACTTCCCTCCATAGATCCATCGTCACCCTGATAATCATCATACCCATCACTATCTTCGT 497 Query 606 TG-TCCTCCTCCTCTTCTTCATCCTCATCTGTTTTATCGTCTTCAACGTCGTCTTGCTCA 664 || ||| ||| | ||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 496 TGTTCC-CCT-C-CTT-TTCATCCTCATCTGTTTTATCGTCTTCAACGTCGTCTTGCTCA 441 Query 665 TCTACAGCCTCATTATTTCCATCTACATTTGAAACACTCCCACACACACGGT-A-----A 718 ||||| |||||||||||| |||| |||||||||||| | |||||||||||| | | Sbjct 440 TCTACGGCCTCATTATTTTCATCAACATTTGAAACATTATCACACACACGGTCACTTTCA 381 Query 719 -C-TC-TCACCATCG-GTCCTAGGGACAGT-ATTCCCGAGTGCCTTGACGGTTGTAATGA 773 | || ||||||| | ||||||| || | | ||||||||||| ||||||||||||||||| Sbjct 380 GCATCGTCACCAT-GAGTCCTAGAGATA-TCATTCCCGAGTGTCTTGACGGTTGTAATGA 323 Query 774 AAGAGACAAACAAGGTGACACTAGGATCCCCACCACGAATCAAAAA---C-T--C-AT-- 824 || ||||||||||| ||| | ||||| || ||||||||||||||| | | | | Sbjct 322 AAAAGACAAACAAGTTGAGAGAAGGATACCGACCACGAATCAAAAAGAACGTATCCAACC 263 Query 825 ----TTGATTGTCAATGTATACAGGAGGGCGTTTACTTTCTATCATCACTGACATCTTTC 880 |||| |||||||||| | ||||||||||||| | ||||| |||||| ||||||||| Sbjct 262 CCACTTGACTGTCAATGTAGATAGGAGGGCGTTTAGTATCTATAATCACTAACATCTTTC 203 Query 881 CCGGCATCCAGTAACTAATTAT-TGGATTG 909 ||| |||| ||||||||||||| || |||| Sbjct 202 CCGACATCGAGTAACTAATTATGTG-ATTG 174 Score = 440 bits (238), Expect = 1e-122 Identities = 278/297 (94%), Gaps = 4/297 (1%) Strand=Plus/Minus Query 3 ATACGATGTGATTTTGAAACATTCTGAATTCTTGACAACTTGAGCTGTCAAATGCCATGG 62 |||||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||| Sbjct 1046 ATACGATGTGATTTTGAAACATTCTGAATTCTTGACGACTTGAGCAGTCAAATGTCATGG 987 Query 63 ACAAGTATCATCAACGCAGACCATCTCCAATCTTGTAGGACATGACCTACGTTGCTTGTA 122 |||||||||||||||||| ||||||||||||||| |||||||||| ||| |||||||||| Sbjct 986 ACAAGTATCATCAACGCATACCATCTCCAATCTTATAGGACATGATCTAGGTTGCTTGTA 927 Query 123 GC-AAAAGCATTGTTTGATTGCGAGATAAGACATTGTTTGTTGTATGACTTTTCTGTTCT 181 || ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 926 GCAAAAAG-ATTGTTTGATTGCGAGATAAGACATTGTTTGTTGTATGACTTTTCTGTTCT 868 Query 182 TAAAAACACTCTCCAATCTATAGTGTACGTACATTGGTACAAACCATGTTGACACGTACG 241 |||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 867 TAAAAACACTTTCCAATCTATAGTGTACGTACATTGGTACAAACCATGTTGACACATACT 808 Query 242 TCTTGGAGTCACCGTTGGTGTACGGTCACCCGAA-TGAGAAATGTTATCTCCGCCAG 297 |||||||||||| | |||||||||||||||| || ||| ||| |||||||||| ||| Sbjct 807 TCTTGGAGTCACAGCTGGTGTACGGTCACCC-AAGTGAAAAAAGTTATCTCCGTCAG 752 Score = 84.2 bits (45), Expect = 2e-15 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 369 GTGTACGTACATTGGTACAAACCATGTTGACACGTACGTCTTGGAGTCACCGTTGGT 425 ||||||||||||||||||||||||||||||||| ||| |||||||||||| | |||| Sbjct 845 GTGTACGTACATTGGTACAAACCATGTTGACACATACTTCTTGGAGTCACAGCTGGT 789 > AT1G30980.1 | Symbols: | transposable element gene | chr1:11049583-11050729 REVERSE LENGTH=1147 Length=1147 Score = 488 bits (264), Expect = 4e-137 Identities = 431/508 (85%), Gaps = 26/508 (5%) Strand=Plus/Minus Query 426 TGAGAATGACGTCCTCCTCAACATTTCCTATTCCATATTCTTCAATAATTAAATCGTTCC 485 ||||||||| || |||||||||||| ||||||||||||||||| | |||| |||||||| Sbjct 734 TGAGAATGATGTTCTCCTCAACATTCCCTATTCCATATTCTTCTACAATTTCATCGTTCC 675 Query 486 ACTTGTTGTAATCGTAATCTTCGCCACTGCCTTCACTACCGTCTATAGTAGGATCGAGGG 545 ||||||||||||| |||||||||||||| | ||||||||| || ||||||||||||| || Sbjct 674 ACTTGTTGTAATCATAATCTTCGCCACTACTTTCACTACCATCAATAGTAGGATCGATGG 615 Query 546 TACTTCCCCCCATAGATCCATCATCACCCTGATAATCATCATACCCAGCACCATCTTCGT 605 ||||| ||| |||||||||||| |||||||||||||||||||||||| |||||||||||| Sbjct 614 TACTT-CCCTCATAGATCCATCGTCACCCTGATAATCATCATACCCATCACCATCTTCGT 556 Query 606 TGTCCTCCTCCTCTTCTTCATCCTCATCTGTTTTATCGTCTTCAACGTCGTCTTGCTCAT 665 ||||| || || | ||||||||||||||||||||||||||||||| |||||||| || || Sbjct 555 TGTCCCCCCCCCCATCTTCATCCTCATCTGTTTTATCGTCTTCAATGTCGTCTTCCTAAT 496 Query 666 CTACAGCCTCATTATTTCCATCTACATTTGAAACACTCCCACACACACGGT-A-----A- 718 |||| |||||||||||| |||| |||||| ||||||| |||||||||||| | | Sbjct 495 CTACGGCCTCATTATTTTCATCAACATTTAAAACACTATCACACACACGGTCACTTTCAG 436 Query 719 C-TC-TCACCATCG-GTCCTAGGGACAGTATTCCCGAGTGCCTTGACGGTTGTAATGAAA 775 | || ||||||| | ||||||| |||| |||||| ||||| |||||| |||||||||| | Sbjct 435 CATCGTCACCAT-GAGTCCTAGAGACATTATTCCTGAGTGTCTTGACAGTTGTAATGATA 377 Query 776 GAGACAAACAAGGTGACACTAGGATCCCCACCACGAATCAAAAAC-T-----C--A---T 824 |||||||||||| ||| | ||||| |||||||||||| ||||| | | | | Sbjct 376 GAGACAAACAAGTTGAGAGAAGGATACCCACCACGAATAAAAAAAATTGTATCCCACCCT 317 Query 825 ---TTGATTGTCAATGTATACAGGAGGGCGTTTACTTTCTATCATCACTGACATCTTTCC 881 |||| |||||||||| ||||||||||||||| | |||||||||||| |||||| || Sbjct 316 CACTTGACTGTCAATGTAGACAGGAGGGCGTTTAGTATCTATCATCACTAACATCTCTCT 257 Query 882 CGGCATCCAGTAACTAATTATTGGATTG 909 ||| ||||||||||||||||| |||||| Sbjct 256 CGGTATCCAGTAACTAATTATGGGATTG 229 Score = 444 bits (240), Expect = 8e-124 Identities = 280/299 (94%), Gaps = 4/299 (1%) Strand=Plus/Minus Query 1 TCATACGATGTGATTTTGAAACATTCTGAATTCTTGACAACTTGAGCTGTCAAATGCCAT 60 ||||||||||||||||||||| ||||| |||||||||| |||||||| |||||||| ||| Sbjct 1106 TCATACGATGTGATTTTGAAATATTCTTAATTCTTGACGACTTGAGCAGTCAAATGTCAT 1047 Query 61 GGACAAGTATCATCAACGCAGACCATCTCCAATCTTGTAGGACATGACCTACGTTGCTTG 120 |||||||||||||||||||| |||||| |||||||||||||| |||||||| |||||||| Sbjct 1046 GGACAAGTATCATCAACGCATACCATCACCAATCTTGTAGGATATGACCTAGGTTGCTTG 987 Query 121 TAGC-AAAAGCATTGTTTGATTGCGAGATAAGACATTGTTTGTTGTATGACTTTTCTGTT 179 |||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 986 TAGCAAAAAG-ATTGTTTGATTGCGAGATAAGACATTGTTTGTTGTATGACTTTTCTGTT 928 Query 180 CTTAAAAACACTCTCCAATCTATAGTGTACGTACATTGGTACAAACCATGTTGACACGTA 239 ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| || Sbjct 927 CTTAAAAACACTCTCCAATTTATAGTGTACGTACATTGGTACAAACCATGTTGACACATA 868 Query 240 CGT-CTTGGAGTCACCGTTGGTGTACGGTCACCCGAATGAGAAATGTTATCTCCGCCAG 297 || ||||||||||| | ||||||||||||||||| |||||||||||||||||||||| Sbjct 867 -GTTCTTGGAGTCACAGCTGGTGTACGGTCACCCGGGTGAGAAATGTTATCTCCGCCAG 810 Score = 78.7 bits (42), Expect = 9e-14 Identities = 53/58 (91%), Gaps = 2/58 (3%) Strand=Plus/Minus Query 369 GTGTACGTACATTGGTACAAACCATGTTGACACGTACGT-CTTGGAGTCACCGTTGGT 425 ||||||||||||||||||||||||||||||||| || || ||||||||||| | |||| Sbjct 903 GTGTACGTACATTGGTACAAACCATGTTGACACATA-GTTCTTGGAGTCACAGCTGGT 847 > AT3G59860.1 | Symbols: | transposable element gene | chr3:22113851-22114908 REVERSE LENGTH=1058 Length=1058 Score = 472 bits (255), Expect = 4e-132 Identities = 429/508 (84%), Gaps = 32/508 (6%) Strand=Plus/Minus Query 426 TGAGAATGACGTCCTCCTCAACATTTCCTATTCCATATTCTTCAATAATTAAATCGTTCC 485 |||||||||||| |||||||||||| ||||||||||||||||| | |||| |||||||| Sbjct 673 TGAGAATGACGTTCTCCTCAACATTCCCTATTCCATATTCTTCTACAATTTCATCGTTCC 614 Query 486 ACTTGTTGTAATCGTAATCTTCGCCACTGCCTTCACTACCGTCTATAGTAGGATCGAGGG 545 ||||||||||||| |||||||||||||| | ||||||||| || ||||||||||||| || Sbjct 613 ACTTGTTGTAATCATAATCTTCGCCACTACTTTCACTACCATCAATAGTAGGATCGATGG 554 Query 546 TACTTCCCCCCATAGATCCATCATCACCCTGATAATCATCATACCCAGCACCATCTTCGT 605 ||||| |||||||||||||||| |||||||||||||||||||||||| |||||||||||| Sbjct 553 TACTT-CCCCCATAGATCCATCGTCACCCTGATAATCATCATACCCATCACCATCTTCGT 495 Query 606 TGTCCTCCTCCTCTTCTTCATCCTCATCTGTTTTATCGTCTTCAACGTCGTCTTGCTCAT 665 || |||| ||| ||||||||||||||||||||||||||||||| ||||||||||| || Sbjct 494 TG---TCCT-CTCATCTTCATCCTCATCTGTTTTATCGTCTTCAATGTCGTCTTGCTAAT 439 Query 666 CTACAGCCTCATTATTTCCATCTACATTTGAAACACTCCCACACACACGGT-A-----A- 718 |||| | |||||||||| |||| ||||| ||||||| ||||||||| || | | Sbjct 438 CTACGGTCTCATTATTTTCATCAACATTA-AAACACTATCACACACACAGTCACTTTCAG 380 Query 719 C-TC-TCACCATCG-GTCCTAGGGACAGTATTCCCGAGTGCCTTGACGGTTGTAATGAAA 775 | || ||||||| | ||||||| |||| |||| ||||||| |||||||||||||||||| Sbjct 379 CATCGTCACCAT-GAGTCCTAGAGACATTATTTCCGAGTGTATTGACGGTTGTAATGAAA 321 Query 776 GAGACAAACAAGGTGACACTAGGATCCCCACCACGAATCAAAAA---C-T--C--A---T 824 |||||||||||| ||| | ||||| |||||||||||| ||||| | | | | | Sbjct 320 GAGACAAACAAGTTGAGAGAAGGATACCCACCACGAATAAAAAAAATCGTATCCCACCCT 261 Query 825 ---TTGATTGTCAATGTATACAGGAGGGCGTTTACTTTCTATCATCACTGACATCTTTCC 881 |||| |||||||||| ||||||||||||||| | |||| ||| ||| ||||| ||| Sbjct 260 CACTTGACTGTCAATGTAGACAGGAGGGCGTTTAGTATCTA-CATAACTAACATCACTCC 202 Query 882 CGGCATCCAGTAACTAATTATTGGATTG 909 ||| |||||||||||||| || |||||| Sbjct 201 CGGTATCCAGTAACTAATCATGGGATTG 174 Score = 433 bits (234), Expect = 2e-120 Identities = 276/297 (93%), Gaps = 0/297 (0%) Strand=Plus/Minus Query 1 TCATACGATGTGATTTTGAAACATTCTGAATTCTTGACAACTTGAGCTGTCAAATGCCAT 60 |||||||||||||||||||||||||||||||||||||| |||||||| |||||||| ||| Sbjct 1045 TCATACGATGTGATTTTGAAACATTCTGAATTCTTGACGACTTGAGCAGTCAAATGTCAT 986 Query 61 GGACAAGTATCATCAACGCAGACCATCTCCAATCTTGTAGGACATGACCTACGTTGCTTG 120 ||||||||||||||||||| | |||| |||||||||||||| |||||||| ||||||| Sbjct 985 AGACAAGTATCATCAACGCATATCATCACCAATCTTGTAGGATATGACCTAGGTTGCTTA 926 Query 121 TAGCAAAAGCATTGTTTGATTGCGAGATAAGACATTGTTTGTTGTATGACTTTTCTGTTC 180 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 925 TAGCAAAAAAATTGTTTGATTGCGAGATAAGACATTGTTTGTTGTATGACTTTTCTGTTC 866 Query 181 TTAAAAACACTCTCCAATCTATAGTGTACGTACATTGGTACAAACCATGTTGACACGTAC 240 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| Sbjct 865 TTAAAAACACTCTCCAATCTATATTGTACGTACATTGGTACAAACCATGTTGACAAATAC 806 Query 241 GTCTTGGAGTCACCGTTGGTGTACGGTCACCCGAATGAGAAATGTTATCTCCGCCAG 297 |||||||||||| ||||||||||||||||| |||||||||||||||||||||| Sbjct 805 TTCTTGGAGTCACAACTGGTGTACGGTCACCCGGGTGAGAAATGTTATCTCCGCCAG 749 Score = 75.0 bits (40), Expect = 1e-12 Identities = 46/49 (94%), Gaps = 0/49 (0%) Strand=Plus/Minus Query 370 TGTACGTACATTGGTACAAACCATGTTGACACGTACGTCTTGGAGTCAC 418 ||||||||||||||||||||||||||||||| ||| |||||||||||| Sbjct 841 TGTACGTACATTGGTACAAACCATGTTGACAAATACTTCTTGGAGTCAC 793 > AT2G16832.1 | Symbols: | transposable element gene | chr2:7293623-7294681 FORWARD LENGTH=1059 Length=1059 Score = 472 bits (255), Expect = 4e-132 Identities = 430/509 (84%), Gaps = 33/509 (6%) Strand=Plus/Minus Query 426 TGAGAATGACGTCCTCCTCAACATTTCCTATTCCATATTCTTCAATAATTAAATCGTTCC 485 |||||||||||| |||||||||||| ||||||||||||||||| | |||| |||| ||| Sbjct 674 TGAGAATGACGTTCTCCTCAACATTCCCTATTCCATATTCTTCTACAATTTCATCGCTCC 615 Query 486 ACTTGTTGTAATCGTAATCTTCGCCACTGCCTTCACTACCGTCTATAGTAGGATCGAGGG 545 |||| |||||||| | ||||| |||||| | ||||||||| || ||||||||||||| || Sbjct 614 ACTTCTTGTAATCAT-ATCTTTGCCACTACTTTCACTACCATCAATAGTAGGATCGATGG 556 Query 546 TACTTCCCCCCATAGATCCATCATCACCCTGATAATCATCATACCCAGCACCATCTTCGT 605 ||||| |||||||||||||||| |||| ||||||||||||||||||| |||||||||||| Sbjct 555 TACTT-CCCCCATAGATCCATCGTCACACTGATAATCATCATACCCATCACCATCTTCGT 497 Query 606 TGTCCTCCTCCTCTTCTTCATCCTCATCTGTTTTATCGTCTTCAACGTCGTCTTGCTCAT 665 ||| | || || | |||||||||||||||||||||||||||||| ||||||||||| || Sbjct 496 TGT-C-CC-CC-CAACTTCATCCTCATCTGTTTTATCGTCTTCAATGTCGTCTTGCTAAT 441 Query 666 CTACAGCCTCATTATTTCCATCTACATTTGAAACACTCCCACACACACGGT-A-----A- 718 |||| |||||||||||| |||| |||||| ||||||| |||||||||||| | | Sbjct 440 CTACGGCCTCATTATTTTCATCAACATTTAAAACACTATCACACACACGGTCACTTTCAG 381 Query 719 C-TC-TCACCATCG-GTCCTAGGGACAGTATTCCCGAGTGCCTTGACGGTTGTAATGAAA 775 | || ||||||| | ||||||| |||| |||||||||||| ||||||||||||||||||| Sbjct 380 CATCGTCACCAT-GAGTCCTAGAGACATTATTCCCGAGTGTCTTGACGGTTGTAATGAAA 322 Query 776 GAGACAAACAAGGTGACACTAGGATCCCCACCACGAATCAAAAA---C-T--C--A---T 824 ||||||||||| ||| | ||||| |||||||||||| ||||| | | | | | Sbjct 321 GAGACAAACAAATTGAGAGAAGGATACCCACCACGAATAAAAAAAATCGTATCCCACCCT 262 Query 825 ---TTGATTGTCAATGTATACAGGAGGGCGTTTACTTTCTATCATCACTGACATCTTTCC 881 |||| |||||||||| ||||||||||||||| | |||||||||||| |||||| ||| Sbjct 261 CACTTGACTGTCAATGTAGACAGGAGGGCGTTTAGTATCTATCATCACTAACATCTCTCC 202 Query 882 CGGCATCCAGTAACTAATTATTG-GATTG 909 ||| ||||| ||||||||||| | ||||| Sbjct 201 CGGTATCCATTAACTAATTAT-GAGATTG 174 Score = 460 bits (249), Expect = 8e-129 Identities = 282/298 (95%), Gaps = 2/298 (1%) Strand=Plus/Minus Query 1 TCATACGATGTGATTTTGAAACATTCTGAATTCTTGACAACTTGAGCTGTCAAATGCCAT 60 |||||||||||||||||||||||||||||||||||||| || ||||| |||||||| ||| Sbjct 1046 TCATACGATGTGATTTTGAAACATTCTGAATTCTTGACGACATGAGCAGTCAAATGTCAT 987 Query 61 GGACAAGTATCATCAACGCAGACCATCTCCAATCTTGTAGGACATGACCTACGTTGCTTG 120 |||||||||||||||||||| |||||| |||||||||||||| |||||||| |||||||| Sbjct 986 GGACAAGTATCATCAACGCATACCATCACCAATCTTGTAGGATATGACCTAGGTTGCTTG 927 Query 121 TAGC-AAAAGCATTGTTTGATTGCGAGATAAGACATTGTTTGTTGTATGACTTTTCTGTT 179 |||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 926 TAGCAAAAAG-ATTGTTTGATTGCGAGATAAGACATTGTTTGTTGTATGACTTTTCTGTT 868 Query 180 CTTAAAAACACTCTCCAATCTATAGTGTACGTACATTGGTACAAACCATGTTGACACGTA 239 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 867 CTTAAAAACACTCTCCAATCTATAGTGTACGTACATTGGTACAAACCATGTTGACACATA 808 Query 240 CGTCTTGGAGTCACCGTTGGTGTACGGTCACCCGAATGAGAAATGTTATCTCCGCCAG 297 | |||||||||||| | ||||||||||||||||| |||||||||||||||||||||| Sbjct 807 CTTCTTGGAGTCACAGCTGGTGTACGGTCACCCGGGTGAGAAATGTTATCTCCGCCAG 750 Score = 84.2 bits (45), Expect = 2e-15 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 369 GTGTACGTACATTGGTACAAACCATGTTGACACGTACGTCTTGGAGTCACCGTTGGT 425 ||||||||||||||||||||||||||||||||| ||| |||||||||||| | |||| Sbjct 843 GTGTACGTACATTGGTACAAACCATGTTGACACATACTTCTTGGAGTCACAGCTGGT 787 > AT1G17900.1 | Symbols: | transposable element gene | chr1:6157368-6158130 REVERSE LENGTH=763 Length=763 Score = 470 bits (254), Expect = 1e-131 Identities = 425/503 (84%), Gaps = 29/503 (6%) Strand=Plus/Minus Query 422 TGGT-TGAGAATGACGTCCTCCTCAACATTTCCTATTCCATATTCTTCAATAATTAAATC 480 |||| |||||||||||| |||||| | | | |||||||||||||| | ||||| ||| Sbjct 663 TGGTGTGAGAATGACGTTCTCCTC-A-A----C-ATTCCATATTCTTCTACAATTACATC 611 Query 481 GTTCCACTTGTTGTAATCGTAATCTTCGCCACTGCCTTCACTACCGTCTATAGTAGGATC 540 |||||||||||||||||| |||||||| |||| | ||||||||| || ||||||||||| Sbjct 610 GTTCCACTTGTTGTAATCACAATCTTCGTCACTACTTTCACTACCATCAATAGTAGGATC 551 Query 541 GAGGGTACTTCCCCCCATAGATCCATCATCACCCTGATAATCATCATACCCAGCACCATC 600 |||||||||||||||||||||| |||| |||||||||||||||||||||||| ||||||| Sbjct 550 GAGGGTACTTCCCCCCATAGATTCATCGTCACCCTGATAATCATCATACCCATCACCATC 491 Query 601 TTCGTTGTCCTCCTCCTCTTCTTCATCCTCATCTGTTTTATCGTCTTCAACGTCGTCTTG 660 |||||||||| ||| | ||| ||||||||||||||||||||||||||||| || |||||| Sbjct 490 TTCGTTGTCCCCCT-C-CTT-TTCATCCTCATCTGTTTTATCGTCTTCAATGTTGTCTTG 434 Query 661 CTCATCTACAGCCTCATTATTTCCATCTACATTTGAAACACTCCCACACACACGGTAACT 720 ||||||||| |||||||||||| |||| ||||||||||||| ||| || | | | Sbjct 433 CTCATCTACGGCCTCATTATTTTCATCAACATTTGAAACACGGTCACTTTCA-GC-ATCG 376 Query 721 CTCACCATCG-GTCCTAGGGACAGTATTCCCGAGTGCCTTGACGGTTGTAATGAAAGAGA 779 ||||||| | ||||||| |||| |||| ||||||| ||||||||||||||||||||||| Sbjct 375 -TCACCAT-GAGTCCTAGAGACATTATTTCCGAGTGTCTTGACGGTTGTAATGAAAGAGA 318 Query 780 CAAACAAGGTGACACTAGGATCCCCACCACGAATCAAAAA---C-T---CAT------TT 826 |||||||| ||| | ||||| || ||||||||| ||||| | | || || Sbjct 317 CAAACAAGTTGAGAGAAGGATACCTACCACGAATTAAAAAGAACGTATTCAACCCCACTT 258 Query 827 GATTGTCAATGTATACAGGAGGGCGTTTACTTTCTATCATCACTGACATCTTTCCCGGCA 886 || |||||||||| ||||||||||||||| | |||||||||||| |||||| |||||| | Sbjct 257 GACTGTCAATGTAGACAGGAGGGCGTTTAGTATCTATCATCACTAACATCTCTCCCGGAA 198 Query 887 TCCAGTAACTAATTATTGGATTG 909 |||||||||||||||| |||||| Sbjct 197 TCCAGTAACTAATTATGGGATTG 175 > AT5G28637.1 | Symbols: | transposable element gene | chr5:10645026-10646093 REVERSE LENGTH=1068 Length=1068 Score = 448 bits (242), Expect = 6e-125 Identities = 430/515 (83%), Gaps = 36/515 (7%) Strand=Plus/Minus Query 426 TGAGAATGACGTCCTCCTCAACATTTCCTATTCCATATTCTTCAATAATTAAATCGTTCC 485 |||||||||||| |||||||||||| ||||||||||||||||| | || || |||||||| Sbjct 683 TGAGAATGACGTTCTCCTCAACATTCCCTATTCCATATTCTTCTACAACTACATCGTTCC 624 Query 486 ACTTGTTGTAATCGTAATCTTCGCCACTGCCTTCACTACCGTCTATAGTAGGATCGAGGG 545 ||||||||||||| |||| ||||||||| | || |||||| || |||||||||||||||| Sbjct 623 ACTTGTTGTAATCATAATTTTCGCCACTACTTTAACTACCATCAATAGTAGGATCGAGGG 564 Query 546 TACTT-------CCCCCCATAGATCCATCATCACCCTGATAATCATCATACCCAGCACCA 598 ||||| ||||||||||||||||| | |||||||||||||||||||||| |||| Sbjct 563 TACTTCCCCCCCCCCCCCATAGATCCATCGTTACCCTGATAATCATCATACCCATCACCG 504 Query 599 TCTTCGTTGTCCTCCTCCTCTTCTTCATCCTCATCTGTTTTATCGTCTTCAACGTCGTCT 658 ||||| |||| | || |||| ||||||||||||||||||||||||||||||||||||||| Sbjct 503 TCTTCATTGT-C-CC-CCTCCTCTTCATCCTCATCTGTTTTATCGTCTTCAACGTCGTCT 447 Query 659 TGCTCATCTACAGCCTCATTATTTCCATCTA-CATTTGAAACACTCCCACACACACGGT- 716 | |||||||| |||||||||||| ||| || |||||||| |||| |||||||||||| Sbjct 446 TCCTCATCTATGGCCTCATTATTTTCAT-TAACATTTGAAGCACTATCACACACACGGTC 388 Query 717 A-----A-C-TC-TCACCATCG-GTCCTAGGGACAGTATTCCCGAGTGCCTTGACGGTTG 767 | | | || ||||||| | ||||||| |||| |||||||||||| ||||||||||| Sbjct 387 ACTTTCAGCATCGTCACCAT-GAGTCCTAGAGACATTATTCCCGAGTGTCTTGACGGTTG 329 Query 768 TAATGAAAGAGACAAACAAGGTGACACTAGGATCCCCACCACGAATCAAAAA---C-T-- 821 |||||||||||||||||||| ||| | ||||| || ||||||||||||||| | | Sbjct 328 TAATGAAAGAGACAAACAAGTTGAGAGAAGGATACCGACCACGAATCAAAAAGAACGTAT 269 Query 822 C-A-T-----TTGATTGTCAATGTATACAGGAGGGCGTTTACTTTCTATCATCACTGACA 874 | | | |||| | |||||| | ||| ||||||||| | | |||||||| ||| ||| Sbjct 268 CCAATCCCACTTGACTATCAATGAAGACAAGAGGGCGTTGAGTATCTATCATGACTAACA 209 Query 875 TCTTTCCCGGCATCCAGTAACTAATTATTGGATTG 909 ||| ||||| |||| ||||||||||||| |||||| Sbjct 208 TCTCTCCCGACATCTAGTAACTAATTATGGGATTG 174 Score = 422 bits (228), Expect = 4e-117 Identities = 275/298 (92%), Gaps = 2/298 (1%) Strand=Plus/Minus Query 1 TCATACGATGTGATTTTGAAACATTCTGAATTCTTGACAACTTGAGCTGTCAAATGCCAT 60 ||||| ||||| |||||||||||||||||||||||||| |||||||| |||||||| ||| Sbjct 1055 TCATAGGATGTAATTTTGAAACATTCTGAATTCTTGACGACTTGAGCAGTCAAATGTCAT 996 Query 61 GGACAAGTATCATCAACGCAGACCATCTCCAATCTTGTAGGACATGACCTACGTTGCTTG 120 |||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| Sbjct 995 GGACAAGTATCATCAACGCATACCATCTCCAATCTTGTAGGACATGACCTAGGTTGCTTG 936 Query 121 TAGCAAAAGCATTGTTTGATTGCGAGATAAGACATTGTTTGTTGTATGACTTTTCTGTTC 180 |||||||| |||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 935 TAGCAAAAAAATTGTTTGATTGTGAGATAAGACATTGTTTGTTGTATGACTTTTCTGTTG 876 Query 181 TTAAAAACACTCTCC-AATCTATAGTGTACGTACATTGGTACAAACCATGTTGACACGTA 239 ||||||||||| ||| |||||||||| || ||||||||||||||||||||||||||| || Sbjct 875 TTAAAAACACT-TCCCAATCTATAGTATATGTACATTGGTACAAACCATGTTGACACATA 817 Query 240 CGTCTTGGAGTCACCGTTGGTGTACGGTCACCCGAATGAGAAATGTTATCTCCGCCAG 297 | ||||||||| || | |||||||||||||||||| |||||||| ||||||||| ||| Sbjct 816 CTTCTTGGAGTTACAGCTGGTGTACGGTCACCCGAGTGAGAAATATTATCTCCGTCAG 759 > AT1G32505.1 | Symbols: | transposable element gene | chr1:11753254-11754123 FORWARD LENGTH=870 Length=870 Score = 427 bits (231), Expect = 8e-119 Identities = 414/499 (83%), Gaps = 25/499 (5%) Strand=Plus/Minus Query 426 TGAGAATGACGTCCTCCTCAACATTTCC-TATTCCATATTCTTCAATAATTAAATCGTTC 484 |||||||||||| |||||||||| |||| |||||||||||||| | ||||| ||||||| Sbjct 551 TGAGAATGACGTTCTCCTCAACA-TTCCATATTCCATATTCTTTTACAATTATATCGTTC 493 Query 485 CACTTGTTGTAATCGTAATCTTCGCCACTGCCTTCACTACCGTCTATAGTAGGATCGAGG 544 |||||||||||||| |||||||||||| | | |||| |||| || ||||||||||||||| Sbjct 492 CACTTGTTGTAATCATAATCTTCGCCAGTACTTTCATTACCATCAATAGTAGGATCGAGG 433 Query 545 GTACTTCCCCCCATAGATCCATCATCACCCTGATAATCATCATACCCAGCACCATCTTCG 604 |||||| |||||||||||||||| |||||||||||||||||||||||| ||||||||| | Sbjct 432 GTACTTTCCCCCATAGATCCATCGTCACCCTGATAATCATCATACCCATCACCATCTTTG 373 Query 605 TTGTCCTCCTCCTCTTCTTCATCCTCATCTGTTTTATCGTCTTCAACGTCGTCTTGCTCA 664 |||| | || |||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 372 TTGT-C-CC-CCTCCTCTTCATCCTCATCTGTTTTATCGTCTTCAACGTCGTCTTGCTCA 316 Query 665 TCTACAGCCTCATTATTTCCATCTACATTTGAAACACTCCCACACACACGGT-A-----A 718 ||||| | |||||||||| |||| |||||||||||||| |||||||||||| | | Sbjct 315 TCTACGGTCTCATTATTTTCATCAACATTTGAAACACTATCACACACACGGTCACTTTCA 256 Query 719 -C-TC-TCACCATCG-GTCCTAGGGACAGTATTCCCGAGTGCCTTGACGGTTGTA-ATGA 773 | || ||||||| | |||||| |||| |||||||||||| |||||||| | | | Sbjct 255 GCATCGTCACCAT-GAGTCCTAAAGACATTATTCCCGAGTGTCTTGACGGACAAACAAGT 197 Query 774 AAGAGACAAACA-AGGTGACACTAGGA-TCCCCACCA-CGAATCAAAAACTCATTTGATT 830 |||| || | | ||| | | || || | | || ||| || | || |||| | Sbjct 196 T-GAGAGAAGGATACC-GAC-C-ACGAATCAAAAAGAACGTATCCAACCC-CACTTGACT 142 Query 831 GTCAATGTATACAGGAGGGCGTTTACTTTCTATCATCACTGACATCTTTCCCGGCATCCA 890 ||||||||| |||||| | |||||| | |||||||||||| |||||| ||| |||||||| Sbjct 141 GTCAATGTAGACAGGAAGACGTTTAGTATCTATCATCACTAACATCTCTCCTGGCATCCA 82 Query 891 GTAACTAATTATTGGATTG 909 |||||||||||| |||||| Sbjct 81 GTAACTAATTATGGGATTG 63 Score = 351 bits (190), Expect = 5e-96 Identities = 228/246 (93%), Gaps = 4/246 (2%) Strand=Plus/Minus Query 54 ATGCCATGGACAAGTATCATCAACGCAGACCATCTCCAATCTTGTAGGACATGACCTACG 113 ||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||| | Sbjct 870 ATGTCATGGACAAGTATCATCAACGCAAACCATCTCCAATCTTGTAGGACATGACCTAGG 811 Query 114 TTGCTTGTAGC-AAAAGCATTGTTTGATTGCGAGATAAGACATTGTTTGTTGTATGACTT 172 ||||||||||| ||||| ||||||||||||| |||||||||||||||||||||||||||| Sbjct 810 TTGCTTGTAGCAAAAAG-ATTGTTTGATTGCAAGATAAGACATTGTTTGTTGTATGACTT 752 Query 173 TTCTGTTCTTAAAAACACTCTCC-AATCTATAGTGTACGTACATTGGTACAAACCATGTT 231 ||||||| ||||||||||| ||| ||||||||||||||||||| |||||||||||||||| Sbjct 751 TTCTGTTTTTAAAAACACT-TCCCAATCTATAGTGTACGTACAATGGTACAAACCATGTT 693 Query 232 GACACGTACGTCTTGGAGTCACCGTTGGTGTACGGTCACCCGAATGAGAAATGTTATCTC 291 ||||| ||| |||||||||||| ||||||| |||||||||| ||||||||||||||| Sbjct 692 GACACATACTTCTTGGAGTCACAACTGGTGTATGGTCACCCGAGTGAGAAATGTTATCTT 633 Query 292 CGCCAG 297 |||||| Sbjct 632 CGCCAG 627 > AT3G45120.1 | Symbols: | transposable element gene | chr3:16511730-16512050 REVERSE LENGTH=321 Length=321 Score = 254 bits (137), Expect = 1e-66 Identities = 266/323 (82%), Gaps = 29/323 (9%) Strand=Plus/Minus Query 577 ATAATCATCATACCCAGCACCATCTTCGTTGTCCTCCTCCTCTTCTTCATCCTCATCTGT 636 |||| ||||||||||| ||||||||||||||| | || |||| ||||||||||||||||| Sbjct 318 ATAAGCATCATACCCATCACCATCTTCGTTGT-C-CC-CCTCCTCTTCATCCTCATCTGT 262 Query 637 TTTATCGTCTTCAACGTCGTCTTGCTCATCTAC-AGCCTCATTATTTCCATCTACATTTG 695 ||||||||||||||||||||||||||||||||| | ||||||||||| |||| ||||||| Sbjct 261 TTTATCGTCTTCAACGTCGTCTTGCTCATCTACGA-CCTCATTATTTTCATCAACATTTG 203 Query 696 AAACACTCCCACACACACGGT-A-----A-C-TC-TCACCATCG-GTCCTAGGGACAGTA 745 ||||||| ||||||||| || | | | || ||||||| | || |||| |||| || Sbjct 202 AAACACTATCACACACACAGTCACTTTCAGCATCGTCACCAT-GAGTTCTAGAGACATTA 144 Query 746 TTCCCGAGTGCCTTGACGGTTGTAATGAAAGAGACAAACAAGGTGACACTAGGATCCCCA 805 || ||||||| ||||||||||||||| ||||||||||||||| ||| | ||||| | | Sbjct 143 TTTCCGAGTGTCTTGACGGTTGTAATAAAAGAGACAAACAAGTTGAGAGAAGGATACTGA 84 Query 806 CCACGAATCAAAAA---C-T---CAT------TTGATTGTCAATGTATACAGGAGGGCGT 852 |||||||| ||||| | | || |||| |||||||||| |||||||||||| Sbjct 83 CCACGAATAAAAAAGAACGTATTCAACCCCACTTGACTGTCAATGTAGACAGGAGGGCGT 24 Query 853 TTACTTTCTATCATCACTGACAT 875 ||| | |||||||||||| |||| Sbjct 23 TTAGTATCTATCATCACTAACAT 1 > AT2G16820.1 | Symbols: | transposable element gene | chr2:7290104-7290952 REVERSE LENGTH=606 Length=606 Score = 237 bits (128), Expect = 1e-61 Identities = 158/172 (92%), Gaps = 3/172 (2%) Strand=Plus/Minus Query 488 TTGTTGTAATCGTAATCTTCGCCACTGCCTTCACTACCGTCTATAGTAGGATCGAGGGTA 547 ||||||||||| |||||||||||||| | ||||||||| || ||||||||||||| || | Sbjct 379 TTGTTGTAATCATAATCTTCGCCACTACTTTCACTACCATCAATAGTAGGATCGAAGGCA 320 Query 548 CTTCCCCCCATAGATCCATCATCACCCTGATAATCATCATACCCAGCACCATCTTCGTTG 607 |||| ||||||||||||||| |||||||||||||||||||||||| |||||||||||||| Sbjct 319 CTTCTCCCCATAGATCCATCGTCACCCTGATAATCATCATACCCATCACCATCTTCGTTG 260 Query 608 TCCTCCTCCTCTTCTTCATCCTCATCTGTTTTATCGTCTTCAACGTCGTCTT 659 | | || |||| |||||||||||||||||||||||||||||||||||||||| Sbjct 259 T-C-CC-CCTCCTCTTCATCCTCATCTGTTTTATCGTCTTCAACGTCGTCTT 211 > AT4G05584.1 | Symbols: | transposable element gene | chr4:2864901-2865581 FORWARD LENGTH=681 Length=681 Score = 222 bits (120), Expect = 4e-57 Identities = 169/191 (88%), Gaps = 9/191 (5%) Strand=Plus/Minus Query 1 TCATACGATGTGATTTTGAAACATTCTGAATTCTTGACAACTTGAGCTGTCAAATGCCAT 60 |||||| |||||||||||||||||||||| |||||||| |||||||| |||||||| || Sbjct 345 TCATACTATGTGATTTTGAAACATTCTGAGTTCTTGACGACTTGAGCAGTCAAATGTAAT 286 Query 61 GGACAAGTATCATCAACGCAGACCATCTCCAATCTTGTAGGACATGACCTACGTTGCTTG 120 |||||||||||||||| ||| || ||||||||||||||||| |||| || ||| Sbjct 285 GGACAAGTATCATCAATGCAAACTATCTCCAATCTTGTAGGCCATG----AC----CTTA 234 Query 121 TAGCAAAAGCATTGTTTGATTGCGAGAT-AAGACATTGTTTGTTGTATGACTTTTCTGTT 179 ||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 233 TAGCAAAAGTATTGTTTGATTGCGAGATAAAGACATTGTTTGTTGTATGACTTTTCTGTT 174 Query 180 CTTAAAAACAC 190 |||| |||||| Sbjct 173 CTTAGAAACAC 163 > AT4G05583.2 | Symbols: | transposable element gene | chr4:2860476-2861486 FORWARD LENGTH=1011 Length=1011 Score = 130 bits (70), Expect = 2e-29 Identities = 78/82 (95%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 109 CTACGTTGCTTGTAGCAAAAGCATTGTTTGATTGCGAGATAAGACATTGTTTGTTGTATG 168 ||| ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 244 CTAGGTTGCTTATAGCAAAAGCATTGTTTGATTGCGAGATAAAACATTGTTTGTTGTATG 185 Query 169 ACTTTTCTGTTCTTAAAAACAC 190 ||||||||||||||| |||||| Sbjct 184 ACTTTTCTGTTCTTAGAAACAC 163 > AT2G06600.1 | Symbols: | transposable element gene | chr2:2639598-2642549 FORWARD LENGTH=2952 Length=2952 Score = 73.1 bits (39), Expect = 4e-12 Identities = 59/69 (86%), Gaps = 0/69 (0%) Strand=Plus/Minus Query 335 ACCTTCGTAGCCTGTATCTTGTACACATTCTGTTGTGTACGTACATTGGTACAAACCATG 394 ||||||| | | ||| |||| | |||| || | |||||||||||||||||||||||||| Sbjct 849 ACCTTCGCATCTTGTCTCTTCTGCACAGACTCTAGTGTACGTACATTGGTACAAACCATG 790 Query 395 TTGACACGT 403 ||||||||| Sbjct 789 TTGACACGT 781 Score = 71.3 bits (38), Expect = 2e-11 Identities = 60/70 (86%), Gaps = 4/70 (6%) Strand=Plus/Minus Query 202 TAGTGTACGTACATTGGTACAAACCATGTTGACACGTACGTCT-TGGAGTCACCG-TTGG 259 ||||||||||||||||||||||||||||||||||||| || ||||| || | |||| Sbjct 817 TAGTGTACGTACATTGGTACAAACCATGTTGACACGT-CGGGGATGGAG-CAGAGGTTGG 760 Query 260 TGTACGGTCA 269 ||||| |||| Sbjct 759 TGTACTGTCA 750 > AT5G28487.1 | Symbols: | transposable element gene | chr5:10441691-10445995 REVERSE LENGTH=4305 Length=4305 Score = 71.3 bits (38), Expect = 2e-11 Identities = 60/70 (86%), Gaps = 4/70 (6%) Strand=Plus/Minus Query 202 TAGTGTACGTACATTGGTACAAACCATGTTGACACGTACGTCT-TGGAGTCACCG-TTGG 259 ||||||||||||||||||||||||||||||||||||| || ||||| || | |||| Sbjct 820 TAGTGTACGTACATTGGTACAAACCATGTTGACACGT-CGGGGATGGAG-CAGAGGTTGG 763 Query 260 TGTACGGTCA 269 ||||| |||| Sbjct 762 TGTACAGTCA 753 Score = 67.6 bits (36), Expect = 2e-10 Identities = 58/69 (84%), Gaps = 0/69 (0%) Strand=Plus/Minus Query 335 ACCTTCGTAGCCTGTATCTTGTACACATTCTGTTGTGTACGTACATTGGTACAAACCATG 394 ||||||| | | ||| || | | |||| || | |||||||||||||||||||||||||| Sbjct 852 ACCTTCGCATCTTGTCTCCTCTGCACAGACTCTAGTGTACGTACATTGGTACAAACCATG 793 Query 395 TTGACACGT 403 ||||||||| Sbjct 792 TTGACACGT 784 > AT2G05490.1 | Symbols: | transposable element gene | chr2:2006873-2009701 REVERSE LENGTH=2829 Length=2829 Score = 71.3 bits (38), Expect = 2e-11 Identities = 60/70 (86%), Gaps = 4/70 (6%) Strand=Plus/Minus Query 202 TAGTGTACGTACATTGGTACAAACCATGTTGACACGTACGTCT-TGGAGTCACCG-TTGG 259 ||||||||||||||||||||||||||||||||||||| || ||||| || | |||| Sbjct 820 TAGTGTACGTACATTGGTACAAACCATGTTGACACGT-CGGGGATGGAG-CAGAGGTTGG 763 Query 260 TGTACGGTCA 269 ||||| |||| Sbjct 762 TGTACAGTCA 753 Score = 65.8 bits (35), Expect = 7e-10 Identities = 35/35 (100%), Gaps = 0/35 (0%) Strand=Plus/Minus Query 369 GTGTACGTACATTGGTACAAACCATGTTGACACGT 403 ||||||||||||||||||||||||||||||||||| Sbjct 818 GTGTACGTACATTGGTACAAACCATGTTGACACGT 784 > AT2G12150.1 | Symbols: | transposable element gene | chr2:4884407-4887236 REVERSE LENGTH=2830 Length=2830 Score = 71.3 bits (38), Expect = 2e-11 Identities = 60/70 (86%), Gaps = 4/70 (6%) Strand=Plus/Minus Query 202 TAGTGTACGTACATTGGTACAAACCATGTTGACACGTACGTCT-TGGAGTCACCG-TTGG 259 ||||||||||||||||||||||||||||||||||||| || ||||| || | |||| Sbjct 820 TAGTGTACGTACATTGGTACAAACCATGTTGACACGT-CGGGGATGGAG-CAGAGGTTGG 763 Query 260 TGTACGGTCA 269 ||||| |||| Sbjct 762 TGTACAGTCA 753 Score = 67.6 bits (36), Expect = 2e-10 Identities = 58/69 (84%), Gaps = 0/69 (0%) Strand=Plus/Minus Query 335 ACCTTCGTAGCCTGTATCTTGTACACATTCTGTTGTGTACGTACATTGGTACAAACCATG 394 ||||||| | | ||| || | | |||| || | |||||||||||||||||||||||||| Sbjct 852 ACCTTCGCATCTTGTCTCCTCTGCACAGACTCTAGTGTACGTACATTGGTACAAACCATG 793 Query 395 TTGACACGT 403 ||||||||| Sbjct 792 TTGACACGT 784 > AT1G45070.1 | Symbols: | transposable element gene | chr1:17035871-17038630 FORWARD LENGTH=2760 Length=2760 Score = 71.3 bits (38), Expect = 2e-11 Identities = 60/70 (86%), Gaps = 4/70 (6%) Strand=Plus/Minus Query 202 TAGTGTACGTACATTGGTACAAACCATGTTGACACGTACGTCT-TGGAGTCACCG-TTGG 259 ||||||||||||||||||||||||||||||||||||| || ||||| || | |||| Sbjct 820 TAGTGTACGTACATTGGTACAAACCATGTTGACACGT-CGGGGATGGAG-CAGAGGTTGG 763 Query 260 TGTACGGTCA 269 ||||| |||| Sbjct 762 TGTACAGTCA 753 Score = 65.8 bits (35), Expect = 7e-10 Identities = 35/35 (100%), Gaps = 0/35 (0%) Strand=Plus/Minus Query 369 GTGTACGTACATTGGTACAAACCATGTTGACACGT 403 ||||||||||||||||||||||||||||||||||| Sbjct 818 GTGTACGTACATTGGTACAAACCATGTTGACACGT 784 > AT3G28110.1 | Symbols: | transposable element gene | chr3:10461763-10462827 FORWARD LENGTH=1065 Length=1065 Score = 69.4 bits (37), Expect = 6e-11 Identities = 37/37 (100%), Gaps = 0/37 (0%) Strand=Plus/Minus Query 202 TAGTGTACGTACATTGGTACAAACCATGTTGACACGT 238 ||||||||||||||||||||||||||||||||||||| Sbjct 820 TAGTGTACGTACATTGGTACAAACCATGTTGACACGT 784 Score = 67.6 bits (36), Expect = 2e-10 Identities = 58/69 (84%), Gaps = 0/69 (0%) Strand=Plus/Minus Query 335 ACCTTCGTAGCCTGTATCTTGTACACATTCTGTTGTGTACGTACATTGGTACAAACCATG 394 ||||||| | | ||| || | | |||| || | |||||||||||||||||||||||||| Sbjct 852 ACCTTCGCATCTTGTCTCCTCTGCACAGACTCTAGTGTACGTACATTGGTACAAACCATG 793 Query 395 TTGACACGT 403 ||||||||| Sbjct 792 TTGACACGT 784 > AT2G16150.1 | Symbols: | transposable element gene | chr2:7009205-7011913 FORWARD LENGTH=2709 Length=2709 Score = 69.4 bits (37), Expect = 6e-11 Identities = 37/37 (100%), Gaps = 0/37 (0%) Strand=Plus/Minus Query 202 TAGTGTACGTACATTGGTACAAACCATGTTGACACGT 238 ||||||||||||||||||||||||||||||||||||| Sbjct 820 TAGTGTACGTACATTGGTACAAACCATGTTGACACGT 784 Score = 67.6 bits (36), Expect = 2e-10 Identities = 58/69 (84%), Gaps = 0/69 (0%) Strand=Plus/Minus Query 335 ACCTTCGTAGCCTGTATCTTGTACACATTCTGTTGTGTACGTACATTGGTACAAACCATG 394 ||||||| | | ||| || | | |||| || | |||||||||||||||||||||||||| Sbjct 852 ACCTTCGCATCTTGTCTCCTCTGCACAGACTCTAGTGTACGTACATTGGTACAAACCATG 793 Query 395 TTGACACGT 403 ||||||||| Sbjct 792 TTGACACGT 784 > AT3G42626.1 | Symbols: | transposable element gene | chr3:14717888-14720449 REVERSE LENGTH=2562 Length=2562 Score = 65.8 bits (35), Expect = 7e-10 Identities = 57/67 (85%), Gaps = 4/67 (6%) Strand=Plus/Minus Query 205 TGTACGTACATTGGTACAAACCATGTTGACACGTACGTCT-TGGAGTCACCG-TTGGTGT 262 |||||||||||||||||||||||||||||||||| || ||||| || | ||||||| Sbjct 621 TGTACGTACATTGGTACAAACCATGTTGACACGT-CGGGGATGGAG-CAGAGATTGGTGT 564 Query 263 ACGGTCA 269 || |||| Sbjct 563 ACTGTCA 557 Score = 63.9 bits (34), Expect = 3e-09 Identities = 34/34 (100%), Gaps = 0/34 (0%) Strand=Plus/Minus Query 370 TGTACGTACATTGGTACAAACCATGTTGACACGT 403 |||||||||||||||||||||||||||||||||| Sbjct 621 TGTACGTACATTGGTACAAACCATGTTGACACGT 588 > AT1G29075.1 | Symbols: | transposable element gene | chr1:10153543-10154701 FORWARD LENGTH=1159 Length=1159 Score = 65.8 bits (35), Expect = 7e-10 Identities = 35/35 (100%), Gaps = 0/35 (0%) Strand=Plus/Minus Query 202 TAGTGTACGTACATTGGTACAAACCATGTTGACAC 236 ||||||||||||||||||||||||||||||||||| Sbjct 819 TAGTGTACGTACATTGGTACAAACCATGTTGACAC 785 Score = 62.1 bits (33), Expect = 9e-09 Identities = 33/33 (100%), Gaps = 0/33 (0%) Strand=Plus/Minus Query 369 GTGTACGTACATTGGTACAAACCATGTTGACAC 401 ||||||||||||||||||||||||||||||||| Sbjct 817 GTGTACGTACATTGGTACAAACCATGTTGACAC 785 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 44406985948 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5