BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg481664
Length=909
Score E
Sequences producing significant alignments: (Bits) Value
AT1G55400.1 | Symbols: | transposable element gene | chr1:2068... 544 8e-154
AT5G03950.1 | Symbols: | transposable element gene | chr5:1066... 532 2e-150
AT5G27590.1 | Symbols: | transposable element gene | chr5:9738... 521 4e-147
AT5G44313.1 | Symbols: | transposable element gene | chr5:1785... 516 2e-145
AT4G04495.1 | Symbols: | transposable element gene | chr4:2236... 507 1e-142
AT5G40110.1 | Symbols: | transposable element gene | chr5:1604... 499 2e-140
AT2G17460.1 | Symbols: | transposable element gene | chr2:7582... 499 2e-140
AT3G29777.1 | Symbols: | transposable element gene | chr3:1165... 496 2e-139
AT3G28800.1 | Symbols: | transposable element gene | chr3:1081... 490 1e-137
AT1G30980.1 | Symbols: | transposable element gene | chr1:1104... 488 4e-137
AT3G59860.1 | Symbols: | transposable element gene | chr3:2211... 472 4e-132
AT2G16832.1 | Symbols: | transposable element gene | chr2:7293... 472 4e-132
AT1G17900.1 | Symbols: | transposable element gene | chr1:6157... 470 1e-131
AT5G28637.1 | Symbols: | transposable element gene | chr5:1064... 448 6e-125
AT1G32505.1 | Symbols: | transposable element gene | chr1:1175... 427 8e-119
AT3G45120.1 | Symbols: | transposable element gene | chr3:1651... 254 1e-66
AT2G16820.1 | Symbols: | transposable element gene | chr2:7290... 237 1e-61
AT4G05584.1 | Symbols: | transposable element gene | chr4:2864... 222 4e-57
AT4G05583.2 | Symbols: | transposable element gene | chr4:2860... 130 2e-29
AT2G06600.1 | Symbols: | transposable element gene | chr2:2639... 73.1 4e-12
AT5G28487.1 | Symbols: | transposable element gene | chr5:1044... 71.3 2e-11
AT2G05490.1 | Symbols: | transposable element gene | chr2:2006... 71.3 2e-11
AT2G12150.1 | Symbols: | transposable element gene | chr2:4884... 71.3 2e-11
AT1G45070.1 | Symbols: | transposable element gene | chr1:1703... 71.3 2e-11
AT3G28110.1 | Symbols: | transposable element gene | chr3:1046... 69.4 6e-11
AT2G16150.1 | Symbols: | transposable element gene | chr2:7009... 69.4 6e-11
AT3G42626.1 | Symbols: | transposable element gene | chr3:1471... 65.8 7e-10
AT1G29075.1 | Symbols: | transposable element gene | chr1:1015... 65.8 7e-10
> AT1G55400.1 | Symbols: | transposable element gene | chr1:20684233-20684965
REVERSE LENGTH=733
Length=733
Score = 544 bits (294), Expect = 8e-154
Identities = 437/503 (87%), Gaps = 22/503 (4%)
Strand=Plus/Minus
Query 422 TGGT-TGAGAATGACGTCCTCCTCAACATTTCCTATTCCATATTCTTCAATAATTAAATC 480
|||| |||||||||||| |||||||||||||||||||||||||||||||| ||||| |||
Sbjct 669 TGGTATGAGAATGACGTTCTCCTCAACATTTCCTATTCCATATTCTTCAACAATTACATC 610
Query 481 GTTCCACTTGTTGTAATCGTAATCTTCGCCACTGCCTTCACTACCGTCTATAGTAGGATC 540
|||||||||||||||||| |||||||||||| | | ||||||||| || |||||||||||
Sbjct 609 GTTCCACTTGTTGTAATCATAATCTTCGCCATTACTTTCACTACCATCAATAGTAGGATC 550
Query 541 GAGGGTACTTCCCCCCATAGATCCATCATCACCCTGATAATCATCATACCCAGCACCATC 600
||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||
Sbjct 549 GAGGGTACTTCCCCCCATAGATCCATCGTCACCCTGATAATCATCATACCCATCACCATC 490
Query 601 TTCGTTGTCCTCCTCCTCTTCTTCATCCTCATCTGTTTTATCGTCTTCAACGTCGTCTTG 660
|||||||||| |||||||||| ||||||||||||||||||||||||||| ||||||||
Sbjct 489 TTCGTTGTCCCCCTCCTCTTC---ATCCTCATCTGTTTTATCGTCTTCAACATCGTCTTG 433
Query 661 CTCATCTACAGCCTCATTATTTCCATCTACATTTGAAACACTCCCACACACACGGTAACT 720
||||||||| |||||||||||| |||| ||||||||||||| ||| || | | |
Sbjct 432 CTCATCTACGGCCTCATTATTTTCATCAACATTTGAAACACGGTCACTTTCA-GC-ATCG 375
Query 721 CTCACCATCG-GTCCTAGGGACAGTATTCCCGAGTGCCTTGACGGTTGTAATGAAAGAGA 779
||||||| | ||||||| |||| ||||| |||||| |||||||||||||||||||||||
Sbjct 374 -TCACCAT-GAGTCCTAGAGACATTATTCTCGAGTGTCTTGACGGTTGTAATGAAAGAGA 317
Query 780 CAAACAAGGTGACACTAGGATCCCCACCACGAATCA-AAA-A-C-T---CAT------TT 826
|||||||| ||| | ||||| || ||||||||||| ||| | | | || ||
Sbjct 316 CAAACAAGTTGAGAGAAGGATACCTACCACGAATCATAAAGAACGTATTCAACCCCACTT 257
Query 827 GATTGTCAATGTATACAGGAGGGCGTTTACTTTCTATCATCACTGACATCTTTCCCGGCA 886
|| |||||||||| |||||| |||||||| | |||||||||||| |||||| ||||||||
Sbjct 256 GACTGTCAATGTAGACAGGAAGGCGTTTAGTATCTATCATCACTAACATCTCTCCCGGCA 197
Query 887 TCCAGTAACTAATTATTGGATTG 909
|||||||||||||||| ||||||
Sbjct 196 TCCAGTAACTAATTATGGGATTG 174
> AT5G03950.1 | Symbols: | transposable element gene | chr5:1066206-1066964
FORWARD LENGTH=759
Length=759
Score = 532 bits (288), Expect = 2e-150
Identities = 441/511 (86%), Gaps = 26/511 (5%)
Strand=Plus/Minus
Query 422 TGGT-TGAGAATGACGTCCTCCTCAACATTTCCTATTCCATATTCTTCAATAATTAAATC 480
|||| |||||||||||| |||||||||||| ||||||||||||||||| | ||||| |||
Sbjct 603 TGGTGTGAGAATGACGTTCTCCTCAACATTCCCTATTCCATATTCTTCTACAATTACATC 544
Query 481 GTTCCACTTGTTGTAATCGTAATCTTCGCCACTGCCTTCACTACCGTCTATAGTAGGATC 540
|||||||||||||||||| |||||||||||||| | ||||||||| || |||||||||||
Sbjct 543 GTTCCACTTGTTGTAATCATAATCTTCGCCACTACTTTCACTACCATCAATAGTAGGATC 484
Query 541 GAGGGTACTTCCCCCCATAGATCCATCATCACCCTGATAATCATCATACCCAGCACCATC 600
||||||||||||||| ||||||||||| |||||||||||||||||||||||| ||| ||
Sbjct 483 GAGGGTACTTCCCCCTATAGATCCATCGTCACCCTGATAATCATCATACCCACCACGATA 424
Query 601 TTCGTTGTCCTCCTCCTCTTCTTCATCCTCATCTGTTTTATCGTCTTCAACGTCGTCTTG 660
|||||||| | || |||| ||||||||||||| |||||||||||||||| ||||||||||
Sbjct 423 TTCGTTGT-C-CC-CCTCCTCTTCATCCTCATTTGTTTTATCGTCTTCATCGTCGTCTTG 367
Query 661 CTCATCTACAGCCTCATTATTTCCATCTACATTTGAAACACTCCCACACACACGGTAACT 720
||||||||| |||||||||||| |||| |||||||||||||| |||| |||||||||||
Sbjct 366 CTCATCTACGGCCTCATTATTTTCATCAACATTTGAAACACTATCACATACACGGTAACT 307
Query 721 CTCA-C--CAT---C--G-GTCCTAGGGACAGTATTCCCGAGTGCCTTGACGGTTGTAAT 771
||| | ||| | | ||||||| |||| ||||| |||||| |||||||||||||||
Sbjct 306 TTCAGCATCATCACCATGAGTCCTAGAGACATTATTCTCGAGTGTCTTGACGGTTGTAAT 247
Query 772 GAAAGAGACAAACAAGGTGACACTAGGATCCCCACCACGAATCAAAAA---C-T--C-AT 824
|||||||||||||||| ||| | ||||| || ||||||||| ||||| | | | |
Sbjct 246 GAAAGAGACAAACAAGTTGAGAGAAGGATACCGACCACGAATTAAAAAGAACGTATCCAA 187
Query 825 ------TTGATTGTCAATGTATACAGGAGGGCGTTTACTTTCTATCATCACTGACATCTT 878
|||| |||||||||| ||||||||||||||| | |||||||||||| ||||||
Sbjct 186 CCCCACTTGACTGTCAATGTAGACAGGAGGGCGTTTAGTATCTATCATCACTAACATCTC 127
Query 879 TCCCGGCATCCAGTAACTAATTATTGGATTG 909
|||||||||||||||||||||||| ||||||
Sbjct 126 TCCCGGCATCCAGTAACTAATTATGGGATTG 96
> AT5G27590.1 | Symbols: | transposable element gene | chr5:9738492-9740473
REVERSE LENGTH=963
Length=963
Score = 521 bits (282), Expect = 4e-147
Identities = 434/504 (86%), Gaps = 24/504 (5%)
Strand=Plus/Minus
Query 422 TGGT-TGAGAATGACGTCCTCCTCAACATTTCCTATTCCATATTCTTCAATAATTAAATC 480
|||| |||||||||||| |||||||||||| ||||||||||||||||| | ||||| |||
Sbjct 669 TGGTGTGAGAATGACGTTCTCCTCAACATTCCCTATTCCATATTCTTCTACAATTACATC 610
Query 481 GTTCCACTTGTTGTAATCGTAATCTTCGCCACTGCCTTCACTACCGTCTATAGTAGGATC 540
|||||||||||||||||| |||||||||||||| | ||||||||| || |||||||||||
Sbjct 609 GTTCCACTTGTTGTAATCATAATCTTCGCCACTACTTTCACTACCATCAATAGTAGGATC 550
Query 541 GAGGGTACTTCCCCCCATAGATCCATCATCACCCTGATAATCATCATACCCAGCACCATC 600
||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||
Sbjct 549 GAGGGTACTTCCCCCCATAGATCCATCGTCACCCTGATAATCATCATACCCATCACCATC 490
Query 601 TTCGTTGTCCTCC-TCCTCTTCTTCATCCTCATCTGTTTTATCGTCTTCAACGTCGTCTT 659
|||||| ||| || | | ||| ||||||||||||||||||||||||||||||||||||||
Sbjct 489 TTCGTTATCC-CCAT-C-CTT-TTCATCCTCATCTGTTTTATCGTCTTCAACGTCGTCTT 434
Query 660 GCTCATCTACAGCCTCATTATTTCCATCTACATTTGAAACACTCCCACACACACGGTAAC 719
|||||| ||| |||||||||||| |||| ||||||||||||| ||| || | | |
Sbjct 433 GCTCATATACGGCCTCATTATTTTCATCAACATTTGAAACACGGTCACTTTCA-GC-ATC 376
Query 720 TCTCACCATCG-GTCCTAGGGACAGTATTCCCGAGTGCCTTGACGGTTGTAATGAAAGAG 778
||||||| | ||||||| |||| ||||| ||||| ||||||||||||||| ||||||
Sbjct 375 G-TCACCAT-GAGTCCTAGAGACATTATTCTTGAGTGTCTTGACGGTTGTAATAAAAGAG 318
Query 779 ACAAACAAGGTGACACTAGGATCCCCACCACGAATCA-AAA-A-C-T---CAT------T 825
||||||||| ||| | ||||| || ||||||||||| ||| | | | || |
Sbjct 317 ACAAACAAGTTGAGAGAAGGATACCTACCACGAATCATAAAGAACGTATTCAACCCCACT 258
Query 826 TGATTGTCAATGTATACAGGAGGGCGTTTACTTTCTATCATCACTGACATCTTTCCCGGC 885
||| |||||||||| ||||||||||||||| | |||||||||||| |||||| |||||||
Sbjct 257 TGACTGTCAATGTAGACAGGAGGGCGTTTAGTATCTATCATCACTAACATCTCTCCCGGC 198
Query 886 ATCCAGTAACTAATTATTGGATTG 909
||||||||||||||||| ||||||
Sbjct 197 ATCCAGTAACTAATTATGGGATTG 174
> AT5G44313.1 | Symbols: | transposable element gene | chr5:17851014-17851727
FORWARD LENGTH=714
Length=714
Score = 516 bits (279), Expect = 2e-145
Identities = 433/504 (86%), Gaps = 24/504 (5%)
Strand=Plus/Minus
Query 422 TGGT-TGAGAATGACGTCCTCCTCAACATTTCCTATTCCATATTCTTCAATAATTAAATC 480
|||| |||||||||||| |||||||||||| ||||||||||||||||| | ||||| |||
Sbjct 558 TGGTGTGAGAATGACGTTCTCCTCAACATTCCCTATTCCATATTCTTCTACAATTACATC 499
Query 481 GTTCCACTTGTTGTAATCGTAATCTTCGCCACTGCCTTCACTACCGTCTA-TAGTAGGAT 539
||||||||||| |||||| ||||||||||||| | ||||||||| || | |||||||||
Sbjct 498 GTTCCACTTGTCGTAATCATAATCTTCGCCACAACTTTCACTACCATC-ATTAGTAGGAT 440
Query 540 CGAGGGTACTTCCCCCCATAGATCCATCATCACCCTGATAATCATCATACCCAGCACCAT 599
|||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||
Sbjct 439 CGAGGGTACTTCCCCCCATAGATCCATCGTCACCCTGATAATCATCATACCCATCACCAT 380
Query 600 CTTCGTTGTCCTCCTCCTCTTCTTCATCCTCATCTGTTTTATCGTCTTCAACGTCGTCTT 659
||||||||| | || |||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 379 CTTCGTTGT-C-CC-CCTCCTCTTCATCCTCATCTGTTTTATCGTCTTCAACGTCGTCTT 323
Query 660 GCTCATCTACAGCCTCATTATTTCCATCTACATTTGAAACACTCCCACACACACGGTAAC 719
|||||||||| |||||||||||| |||| ||||||||||||| ||| || | | |
Sbjct 322 GCTCATCTACGGCCTCATTATTTTCATCAACATTTGAAACACGGTCACTTTCA-GC-ATC 265
Query 720 TCTCACCATCG-GTCCTAGGGACAGTATTCCCGAGTGCCTTGACGGTTGTAATGAAAGAG 778
||| ||| | | ||||| |||| |||||| ||||| ||||||||||||||||||||||
Sbjct 264 A-TCATCAT-GAGCCCTAGAGACATTATTCCTGAGTGTCTTGACGGTTGTAATGAAAGAG 207
Query 779 ACAAACAAGGTGACACTAGGATCCCCACCACGAATCA-AAA-A-C-T---CA--T----T 825
||||||||| ||| | ||||| || ||||||||||| ||| | | | || | |
Sbjct 206 ACAAACAAGTTGAGAGAAGGATACCTACCACGAATCATAAAGAACGTATTCAACTCCACT 147
Query 826 TGATTGTCAATGTATACAGGAGGGCGTTTACTTTCTATCATCACTGACATCTTTCCCGGC 885
||| |||||||||| ||||||||||||||| | |||||||||||| |||||| || |||
Sbjct 146 TGACTGTCAATGTAGACAGGAGGGCGTTTAGTATCTATCATCACTAACATCTCTCTGGGC 87
Query 886 ATCCAGTAACTAATTATTGGATTG 909
||||||||||||||||| ||||||
Sbjct 86 ATCCAGTAACTAATTATGGGATTG 63
Score = 152 bits (82), Expect = 5e-36
Identities = 97/104 (93%), Gaps = 2/104 (2%)
Strand=Plus/Minus
Query 195 CAATCTATAGTGTACGTACATTGGTACAAACCATGTTGACACGTACGTCTTGGAGTCACC 254
||||||||||||||||||||||||||||||| |||||||||| ||| ||||||||||||
Sbjct 713 CAATCTATAGTGTACGTACATTGGTACAAACGATGTTGACACATACTTCTTGGAGTCACA 654
Query 255 GT-TGGTGTACGGTCACCCGAATGAGAAATGTTATCTCCGCCAG 297
| |||||||||||||||||| ||||||||||||||||||||||
Sbjct 653 -TCTGGTGTACGGTCACCCGAGTGAGAAATGTTATCTCCGCCAG 611
> AT4G04495.1 | Symbols: | transposable element gene | chr4:2236004-2237046
REVERSE LENGTH=1043
Length=1043
Score = 507 bits (274), Expect = 1e-142
Identities = 436/509 (86%), Gaps = 32/509 (6%)
Strand=Plus/Minus
Query 426 TGAGAATGACGTCCTCCTCAACATTTCCTATTCCATATTCTTCAATAATTAAATCGTTCC 485
||| ||||| ||||||||||||||| ||||||||||||||||| | ||||| ||||||||
Sbjct 658 TGAAAATGAAGTCCTCCTCAACATTCCCTATTCCATATTCTTCTACAATTACATCGTTCC 599
Query 486 ACTTGTTGTAATCGTAATCTTCGCCACTGCCTTCACTACCGTCTATAGTAGGATCGAGGG 545
||||||||||||| |||||||||||||| | ||||||||| || ||||||||||||||||
Sbjct 598 ACTTGTTGTAATCATAATCTTCGCCACTACTTTCACTACCATCGATAGTAGGATCGAGGG 539
Query 546 TACTTCCCCCCATAGATCCATCA-TCACCCTGATAATCATCATACCCAGCACCATCTTCG 604
||||| | ||||||||||||| | |||||||||||||||||||||||| |||||| ||||
Sbjct 538 TACTT-CTCCCATAGATCCAT-AGTCACCCTGATAATCATCATACCCATCACCATTTTCG 481
Query 605 TTGTCCTCCTCCTCTTCTTCATCCTCATCTGTTTTATCGTCTTCAACGTCGTCTTGCTCA 664
|||| | || |||| | |||||| |||||||||||| |||||||||||||||||||||||
Sbjct 480 TTGT-C-CC-CCTCCTATTCATCTTCATCTGTTTTACCGTCTTCAACGTCGTCTTGCTCA 424
Query 665 TCTA-CAGCCTCATTATTTCCATCTACATTTGAAACACTCCCACACACACGGT-A----- 717
|||| | |||||||||||| |||| |||||||||||||| |||||||| ||| |
Sbjct 423 TCTAGC-GCCTCATTATTTTCATCAACATTTGAAACACTATCACACACATGGTCACTTTC 365
Query 718 A-C-TC-TCACCATCG-GTCCTAGGGACAGTATTCCCGAGTGCCTTGACGGTTGTAATGA 773
| | || ||||||| | ||||||| |||| |||| ||||||| |||||||||||||||||
Sbjct 364 AGCATCGTCACCAT-GAGTCCTAGAGACATTATTTCCGAGTGTCTTGACGGTTGTAATGA 306
Query 774 AAGAGACAAACAAGGTGACACTAGGATCCCCACCACGAATCAAAAA---C-T--C-AT-- 824
|||||||||||||| | | | | ||| |||||||||||||||||| | | | |
Sbjct 305 AAGAGACAAACAAGTTAAGAAAAAGATACCCACCACGAATCAAAAAGAACGTATCTAACC 246
Query 825 ----TTGATTGTCAATGTATACAGGAGGGCGTTTACTTTCTATCATCACTGACATCTTTC 880
|||| |||||||||| ||||||||||||||| | ||||||||||||||||||| ||
Sbjct 245 CCACTTGACTGTCAATGTAGACAGGAGGGCGTTTAGTATCTATCATCACTGACATCTCTC 186
Query 881 CCGGCATCCAGTAACTAATTATTGGATTG 909
|||||||||||||||||||||| ||||||
Sbjct 185 CCGGCATCCAGTAACTAATTATGGGATTG 157
Score = 442 bits (239), Expect = 3e-123
Identities = 274/291 (94%), Gaps = 2/291 (1%)
Strand=Plus/Minus
Query 1 TCATACGATGTGATTTTGAAACATTCTGAATTCTTGACAACTTGAGCTGTCAAATGCCAT 60
||||||||||||||||||||||||||||||||| |||| |||||||| |||||||| |||
Sbjct 1030 TCATACGATGTGATTTTGAAACATTCTGAATTCCTGACGACTTGAGCAGTCAAATGTCAT 971
Query 61 GGACAAGTATCATCAACGCAGACCATCTCCAATCTTGTAGGACATGACCTACGTTGCTTG 120
||||| |||||||||||||| || ||||||||||||||||||||||||||| |||||||
Sbjct 970 GGACAGGTATCATCAACGCATACTATCTCCAATCTTGTAGGACATGACCTAGGTTGCTTA 911
Query 121 TAGCAAAAGCATTGTTTGATTGCGAGATAAGACATTGTTTGTTGTATGACTTTTCTGTTC 180
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 910 TAGCAAAAACATTGTTTGATTGCGAGATAAGACATTGTTTGTTGTATGACTTTTCTGTTC 851
Query 181 TTAAAAACACT-CTCCAATCTATAGTGTACGTACATTGGTACAAACCATGTTGACACGTA 239
||||||| ||| || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 850 TTAAAAATACTCCT-CAATCTATAGTGTACGTACATTGGTACAAACCATGTTGACACGTA 792
Query 240 CGTCTTGGAGTCACCGTTGGTGTACGGTCACCCGAATGAGAAATGTTATCT 290
| |||||||||||| | |||||||||||||||||| |||||||||||||||
Sbjct 791 CTTCTTGGAGTCACAGCTGGTGTACGGTCACCCGAGTGAGAAATGTTATCT 741
Score = 89.8 bits (48), Expect = 4e-17
Identities = 54/57 (95%), Gaps = 0/57 (0%)
Strand=Plus/Minus
Query 369 GTGTACGTACATTGGTACAAACCATGTTGACACGTACGTCTTGGAGTCACCGTTGGT 425
||||||||||||||||||||||||||||||||||||| |||||||||||| | ||||
Sbjct 827 GTGTACGTACATTGGTACAAACCATGTTGACACGTACTTCTTGGAGTCACAGCTGGT 771
> AT5G40110.1 | Symbols: | transposable element gene | chr5:16049934-16050776
FORWARD LENGTH=843
Length=843
Score = 499 bits (270), Expect = 2e-140
Identities = 436/512 (85%), Gaps = 28/512 (5%)
Strand=Plus/Minus
Query 422 TGGT-TGAGAATGACGTCCTCCTCAACATTTCCTATTCCATATTCTTCAATAATTAAATC 480
|||| |||||||||||| ||| |||||||| ||||||||||||||||| | ||||| |||
Sbjct 603 TGGTGTGAGAATGACGTTCTCGTCAACATTCCCTATTCCATATTCTTCTACAATTACATC 544
Query 481 GTTCCACTTGTTGTAATCGTAATCTTCGCCACTGCCTTCACTACCGTCTATAGTAGGATC 540
|||||||||||||||||| |||||||||||||| | ||||||||| || |||||||||||
Sbjct 543 GTTCCACTTGTTGTAATCATAATCTTCGCCACTACTTTCACTACCATCAATAGTAGGATC 484
Query 541 GAGGGTACTTCCCCCCATAGATCCATCATCACCCTGATAATCATCATACCCAGCACCATC 600
||||||||||||||| ||||||||||| |||||||||||||||||||||||| |||||||
Sbjct 483 GAGGGTACTTCCCCCTATAGATCCATCGTCACCCTGATAATCATCATACCCACCACCATC 424
Query 601 TTCGTTGTCCTCCTCCTCTTCTTCATCCTCATCTGTTTTATCGTCTTCAACGTCGTCTTG 660
|| ||||| | || |||| ||||||||||||| |||||||||||||||| |||||||||
Sbjct 423 TTTGTTGT-C-CC-CCTCCTCTTCATCCTCATTTGTTTTATCGTCTTCATCGTCGTCTTT 367
Query 661 CTCATCTACAGCCTCATTATTTCCATCTACATTTGAAACACTCCCACACACACGGT-A-- 717
||||||||| |||||||||||| |||| |||||||||||||| |||| ||||||| |
Sbjct 366 CTCATCTACGGCCTCATTATTTTCATCAACATTTGAAACACTATCACATACACGGTCACT 307
Query 718 ---A-C-TC-TCACCATCG-GTCCTAGGGACAGTATTCCCGAGTGCCTTGACGGTTGTAA 770
| | || ||||||| | ||||||| |||| |||| || ||| ||||||||||||||
Sbjct 306 TTCAGCATCATCACCAT-GAGTCCTAGAGACATTATTATCGGGTGTCTTGACGGTTGTAA 248
Query 771 TGAAAGAGACAAACAAGGTGACACTAGGATCCCCACCACGAATCAAAAA---C-T--C-A 823
|||||||||||||||| ||| | ||||| || ||||||||| ||||| | | | |
Sbjct 247 TGAAAGAGACAAACAAATTGAGAGAAGGATACCGACCACGAATTAAAAAGAACGTATCCA 188
Query 824 T------TTGATTGTCAATGTATACAGGAGGGCGTTTACTTTCTATCATCACTGACATCT 877
|||| |||||||||| ||||||||||||||| | ||||||| |||| ||||||
Sbjct 187 ACCCCACTTGACTGTCAATGTAGACAGGAGGGCGTTTAGTATCTATCAGCACTAACATCT 128
Query 878 TTCCCGGCATCCAGTAACTAATTATTGGATTG 909
|||||||||||||||||||||||| ||||||
Sbjct 127 CTCCCGGCATCCAGTAACTAATTATGGGATTG 96
> AT2G17460.1 | Symbols: | transposable element gene | chr2:7582174-7583230
FORWARD LENGTH=1057
Length=1057
Score = 499 bits (270), Expect = 2e-140
Identities = 435/509 (85%), Gaps = 33/509 (6%)
Strand=Plus/Minus
Query 426 TGAGAATGACGTCCTCCTCAACATTTCCTATTCCATATTCTTCAATAATTAAATCGTTCC 485
|||||||||||| |||||||||||| ||||||||||||||||| | |||| ||||||||
Sbjct 672 TGAGAATGACGTTCTCCTCAACATTCCCTATTCCATATTCTTCTACAATTTCATCGTTCC 613
Query 486 ACTTGTTGTAATCGTAATCTTCGCCACTGCCTTCACTACCGTCTATAGTAGGATCGAGGG 545
||||||||||||| |||||||||||||| | ||||||||| || ||||||||||||| ||
Sbjct 612 ACTTGTTGTAATCATAATCTTCGCCACTACTTTCACTACCATCAATAGTAGGATCGATGG 553
Query 546 TACTTCCCCCCATAGATCCATCATCACCCTGATAATCATCATACCCAGCACCATCTTCGT 605
||||| |||||||||||||||| |||||||||||||||||||||||| ||||||||||||
Sbjct 552 TACTT-CCCCCATAGATCCATCGTCACCCTGATAATCATCATACCCATCACCATCTTCGT 494
Query 606 TGTCCTCCTCCTCTTCTTCATCCTCATCTGTTTTATCGTCTTCAA-CGTCGTCTTGCTCA 664
||| | || || | ||||||||||||||||||||||||||||||| | ||||||| || |
Sbjct 493 TGT-C-CC-CC-CATCTTCATCCTCATCTGTTTTATCGTCTTCAATC-TCGTCTTACTAA 439
Query 665 TCTACAGCCTCATTATTTCCATCTACATTTGAAACACTCCCACACACACGGT-A-----A 718
|||| |||||||||||| |||| |||||| ||||||| |||||||||||| | |
Sbjct 438 TCTATGGCCTCATTATTTTCATCAACATTTAAAACACTATCACACACACGGTCACTTTCA 379
Query 719 -C-TC-TCACCATCG-GTCCTAGGGACAGTATTCCCGAGTGCCTTGACGGTTGTAATGAA 774
| || ||||||| | ||||||| |||| |||||||||||| ||||||||||||||||||
Sbjct 378 GCATCGTCACCAT-GAGTCCTAGAGACATTATTCCCGAGTGTCTTGACGGTTGTAATGAA 320
Query 775 AGAGACAAACAAGGTGACACTAGGATCCCCACCACGAATCAAAAA---C-T--C--A--- 823
||||||||||||| ||| | ||||| |||||||||||| ||||| | | | |
Sbjct 319 AGAGACAAACAAGTTGAGAGAAGGATACCCACCACGAATAAAAAAAATCGTATCCCACCC 260
Query 824 T---TTGATTGTCAATGTATACAGGAGGGCGTTTACTTTCTATCATCACTGACATCTTTC 880
| |||| |||||||||| ||||||||||||||| | |||||||||||| |||||| ||
Sbjct 259 TCACTTGACTGTCAATGTAGACAGGAGGGCGTTTAGTATCTATCATCACTAACATCTCTC 200
Query 881 CCGGCATCCAGTAACTAATTATTGGATTG 909
||| ||||||||||||||||| ||||||
Sbjct 199 CCGT-ATCCAGTAACTAATTATGGGATTG 172
Score = 460 bits (249), Expect = 8e-129
Identities = 282/298 (95%), Gaps = 2/298 (1%)
Strand=Plus/Minus
Query 1 TCATACGATGTGATTTTGAAACATTCTGAATTCTTGACAACTTGAGCTGTCAAATGCCAT 60
||||||||||||||||||||| |||||||||||||||| |||||||| |||||||| |||
Sbjct 1044 TCATACGATGTGATTTTGAAATATTCTGAATTCTTGACGACTTGAGCAGTCAAATGTCAT 985
Query 61 GGACAAGTATCATCAACGCAGACCATCTCCAATCTTGTAGGACATGACCTACGTTGCTTG 120
|||||||||||||||||||| |||||| |||||||||||||| |||||||| ||||||||
Sbjct 984 GGACAAGTATCATCAACGCATACCATCACCAATCTTGTAGGATATGACCTAGGTTGCTTG 925
Query 121 TAGC-AAAAGCATTGTTTGATTGCGAGATAAGACATTGTTTGTTGTATGACTTTTCTGTT 179
|||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 924 TAGCAAAAAG-ATTGTTTGATTGCGAGATAAGACATTGTTTGTTGTATGACTTTTCTGTT 866
Query 180 CTTAAAAACACTCTCCAATCTATAGTGTACGTACATTGGTACAAACCATGTTGACACGTA 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 865 CTTAAAAACACTCTCCAATCTATAGTGTACGTACATTGGTACAAACCATGTTGACACATA 806
Query 240 CGTCTTGGAGTCACCGTTGGTGTACGGTCACCCGAATGAGAAATGTTATCTCCGCCAG 297
| |||||||||||| | ||||||||||||||||| ||||||||||||||||||||||
Sbjct 805 CTTCTTGGAGTCACAGCTGGTGTACGGTCACCCGGGTGAGAAATGTTATCTCCGCCAG 748
Score = 84.2 bits (45), Expect = 2e-15
Identities = 53/57 (93%), Gaps = 0/57 (0%)
Strand=Plus/Minus
Query 369 GTGTACGTACATTGGTACAAACCATGTTGACACGTACGTCTTGGAGTCACCGTTGGT 425
||||||||||||||||||||||||||||||||| ||| |||||||||||| | ||||
Sbjct 841 GTGTACGTACATTGGTACAAACCATGTTGACACATACTTCTTGGAGTCACAGCTGGT 785
> AT3G29777.1 | Symbols: | transposable element gene | chr3:11658757-11659845
REVERSE LENGTH=1089
Length=1089
Score = 496 bits (268), Expect = 2e-139
Identities = 433/508 (85%), Gaps = 30/508 (6%)
Strand=Plus/Minus
Query 426 TGAGAATGACGTCCTCCTCAACATTTCCTATTCCATATTCTTCAATAATTAAATCGTTCC 485
|||||||||||| |||||||||||| |||||||||||||||| | |||| ||||||||
Sbjct 675 TGAGAATGACGTTCTCCTCAACATTCCCTATTCCATATTCTTTTACAATTTCATCGTTCC 616
Query 486 ACTTGTTGTAATCGTAATCTTCGCCACTGCCTTCACTACCGTCTATAGTAGGATCGAGGG 545
||||||||||||| |||||||||||||| | ||||||||| || ||||||||||||| ||
Sbjct 615 ACTTGTTGTAATCATAATCTTCGCCACTACTTTCACTACCATCAATAGTAGGATCGATGG 556
Query 546 TACTTCCCCCCATAGATCCATCATCACCCTGATAATCATCATACCCAGCACCATCTTCGT 605
||||| |||||||||||||||| |||||||||||||||||||||||| ||||||||||||
Sbjct 555 TACTT-CCCCCATAGATCCATCGTCACCCTGATAATCATCATACCCATCACCATCTTCGT 497
Query 606 TGTCCTCCTCCTCTTCTTCATCCTCATCTGTTTTATCGTCTTCAA-CGTCGTCTTGCTCA 664
||| | || || | ||||||||||||||||||||||||||||||| | |||||||||| |
Sbjct 496 TGT-C-CC-CC-CATCTTCATCCTCATCTGTTTTATCGTCTTCAATC-TCGTCTTGCTAA 442
Query 665 TCTACAGCCTCATTATTTCCATCTACATTTGAAACACTCCCACACACACGGTAACTCTCA 724
|||| |||||||||||| |||| |||||| ||||||| |||||||||||| ||| |||
Sbjct 441 TCTATGGCCTCATTATTTTCATCAACATTTAAAACACTATCACACACACGGTCACTTTCA 382
Query 725 CCATCG-------G--TCCTAGGGACAGTATTCCCGAGTGCCTTGACGGTTGTAATGAAA 775
||||| | |||||| |||| |||||||||||| |||||||||||||||||||
Sbjct 381 GCATCGTCACCATGACTCCTAGAGACATTATTCCCGAGTGTCTTGACGGTTGTAATGAAA 322
Query 776 GAGACAAACAAGGTGACACTAGGATCCCCACCACGAATCAAAAA---C-T--C--A---T 824
|||||||||||| ||| | ||||| |||||||||||| ||||| | | | | |
Sbjct 321 GAGACAAACAAGTTGAGAGAAGGATACCCACCACGAATAAAAAAAATCGTATCCCACCCT 262
Query 825 ---TTGATTGTCAATGTATACAGGAGGGCGTTTACTTTCTATCATCACTGACATCTTTCC 881
|||| | |||||||| ||||||||||||||| | |||||||||||| |||||| |||
Sbjct 261 CACTTGACTCTCAATGTAGACAGGAGGGCGTTTAGTATCTATCATCACTAACATCTCTCC 202
Query 882 CGGCATCCAGTAACTAATTATTGGATTG 909
||| ||||||||||||||||| ||||||
Sbjct 201 CGGTATCCAGTAACTAATTATGGGATTG 174
Score = 455 bits (246), Expect = 4e-127
Identities = 281/298 (94%), Gaps = 2/298 (1%)
Strand=Plus/Minus
Query 1 TCATACGATGTGATTTTGAAACATTCTGAATTCTTGACAACTTGAGCTGTCAAATGCCAT 60
||||||||||||||||||||| |||||||||||||||| |||||||| |||||||| |||
Sbjct 1046 TCATACGATGTGATTTTGAAATATTCTGAATTCTTGACGACTTGAGCAGTCAAATGTCAT 987
Query 61 GGACAAGTATCATCAACGCAGACCATCTCCAATCTTGTAGGACATGACCTACGTTGCTTG 120
|||||||||||||||||||| |||||| |||||||||||||| |||||||| ||||||||
Sbjct 986 GGACAAGTATCATCAACGCATACCATCACCAATCTTGTAGGATATGACCTAGGTTGCTTG 927
Query 121 TAGC-AAAAGCATTGTTTGATTGCGAGATAAGACATTGTTTGTTGTATGACTTTTCTGTT 179
|||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 926 TAGCAAAAAG-ATTGTTTGATTGCGAGATAAGACATTGTTTGTTGTATGACTTTTCTGTT 868
Query 180 CTTAAAAACACTCTCCAATCTATAGTGTACGTACATTGGTACAAACCATGTTGACACGTA 239
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 867 CTTAAAAACACTCTTCAATCTATAGTGTACGTACATTGGTACAAACCATGTTGACACATA 808
Query 240 CGTCTTGGAGTCACCGTTGGTGTACGGTCACCCGAATGAGAAATGTTATCTCCGCCAG 297
| |||||||||||| | ||||||||||||||||| ||||||||||||||||||||||
Sbjct 807 CTTCTTGGAGTCACAGCTGGTGTACGGTCACCCGGGTGAGAAATGTTATCTCCGCCAG 750
Score = 84.2 bits (45), Expect = 2e-15
Identities = 53/57 (93%), Gaps = 0/57 (0%)
Strand=Plus/Minus
Query 369 GTGTACGTACATTGGTACAAACCATGTTGACACGTACGTCTTGGAGTCACCGTTGGT 425
||||||||||||||||||||||||||||||||| ||| |||||||||||| | ||||
Sbjct 843 GTGTACGTACATTGGTACAAACCATGTTGACACATACTTCTTGGAGTCACAGCTGGT 787
> AT3G28800.1 | Symbols: | transposable element gene | chr3:10817053-10818113
REVERSE LENGTH=1061
Length=1061
Score = 490 bits (265), Expect = 1e-137
Identities = 434/510 (85%), Gaps = 33/510 (6%)
Strand=Plus/Minus
Query 426 TGAGAATGACGTCCTCCTCAACATTTCCTATTCCATATTCTTCAATAATTAAATCGTTCC 485
|||||||||||| |||||||||||| |||||| |||||||||| | | ||| ||||||||
Sbjct 676 TGAGAATGACGTTCTCCTCAACATTCCCTATTTCATATTCTTCTACAGTTACATCGTTCC 617
Query 486 ACTTGTTGTAATCGTAATCTTCGCCACTGCCTTCACTACCGTCTATAGTAGGATCGAGGG 545
|||| |||||||| |||||||||||||| | ||||||||| || ||||||||||||||||
Sbjct 616 ACTTATTGTAATCATAATCTTCGCCACTACTTTCACTACCATCAATAGTAGGATCGAGGG 557
Query 546 TACTTCCCCCCATAGATCCATCATCACCCTGATAATCATCATACCCAGCACCATCTTCGT 605
|||||||| ||||||||||||| |||||||||||||||||||||||| ||| ||||||||
Sbjct 556 TACTTCCCTCCATAGATCCATCGTCACCCTGATAATCATCATACCCATCACTATCTTCGT 497
Query 606 TG-TCCTCCTCCTCTTCTTCATCCTCATCTGTTTTATCGTCTTCAACGTCGTCTTGCTCA 664
|| ||| ||| | ||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 496 TGTTCC-CCT-C-CTT-TTCATCCTCATCTGTTTTATCGTCTTCAACGTCGTCTTGCTCA 441
Query 665 TCTACAGCCTCATTATTTCCATCTACATTTGAAACACTCCCACACACACGGT-A-----A 718
||||| |||||||||||| |||| |||||||||||| | |||||||||||| | |
Sbjct 440 TCTACGGCCTCATTATTTTCATCAACATTTGAAACATTATCACACACACGGTCACTTTCA 381
Query 719 -C-TC-TCACCATCG-GTCCTAGGGACAGT-ATTCCCGAGTGCCTTGACGGTTGTAATGA 773
| || ||||||| | ||||||| || | | ||||||||||| |||||||||||||||||
Sbjct 380 GCATCGTCACCAT-GAGTCCTAGAGATA-TCATTCCCGAGTGTCTTGACGGTTGTAATGA 323
Query 774 AAGAGACAAACAAGGTGACACTAGGATCCCCACCACGAATCAAAAA---C-T--C-AT-- 824
|| ||||||||||| ||| | ||||| || ||||||||||||||| | | | |
Sbjct 322 AAAAGACAAACAAGTTGAGAGAAGGATACCGACCACGAATCAAAAAGAACGTATCCAACC 263
Query 825 ----TTGATTGTCAATGTATACAGGAGGGCGTTTACTTTCTATCATCACTGACATCTTTC 880
|||| |||||||||| | ||||||||||||| | ||||| |||||| |||||||||
Sbjct 262 CCACTTGACTGTCAATGTAGATAGGAGGGCGTTTAGTATCTATAATCACTAACATCTTTC 203
Query 881 CCGGCATCCAGTAACTAATTAT-TGGATTG 909
||| |||| ||||||||||||| || ||||
Sbjct 202 CCGACATCGAGTAACTAATTATGTG-ATTG 174
Score = 440 bits (238), Expect = 1e-122
Identities = 278/297 (94%), Gaps = 4/297 (1%)
Strand=Plus/Minus
Query 3 ATACGATGTGATTTTGAAACATTCTGAATTCTTGACAACTTGAGCTGTCAAATGCCATGG 62
|||||||||||||||||||||||||||||||||||| |||||||| |||||||| |||||
Sbjct 1046 ATACGATGTGATTTTGAAACATTCTGAATTCTTGACGACTTGAGCAGTCAAATGTCATGG 987
Query 63 ACAAGTATCATCAACGCAGACCATCTCCAATCTTGTAGGACATGACCTACGTTGCTTGTA 122
|||||||||||||||||| ||||||||||||||| |||||||||| ||| ||||||||||
Sbjct 986 ACAAGTATCATCAACGCATACCATCTCCAATCTTATAGGACATGATCTAGGTTGCTTGTA 927
Query 123 GC-AAAAGCATTGTTTGATTGCGAGATAAGACATTGTTTGTTGTATGACTTTTCTGTTCT 181
|| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 926 GCAAAAAG-ATTGTTTGATTGCGAGATAAGACATTGTTTGTTGTATGACTTTTCTGTTCT 868
Query 182 TAAAAACACTCTCCAATCTATAGTGTACGTACATTGGTACAAACCATGTTGACACGTACG 241
|||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 867 TAAAAACACTTTCCAATCTATAGTGTACGTACATTGGTACAAACCATGTTGACACATACT 808
Query 242 TCTTGGAGTCACCGTTGGTGTACGGTCACCCGAA-TGAGAAATGTTATCTCCGCCAG 297
|||||||||||| | |||||||||||||||| || ||| ||| |||||||||| |||
Sbjct 807 TCTTGGAGTCACAGCTGGTGTACGGTCACCC-AAGTGAAAAAAGTTATCTCCGTCAG 752
Score = 84.2 bits (45), Expect = 2e-15
Identities = 53/57 (93%), Gaps = 0/57 (0%)
Strand=Plus/Minus
Query 369 GTGTACGTACATTGGTACAAACCATGTTGACACGTACGTCTTGGAGTCACCGTTGGT 425
||||||||||||||||||||||||||||||||| ||| |||||||||||| | ||||
Sbjct 845 GTGTACGTACATTGGTACAAACCATGTTGACACATACTTCTTGGAGTCACAGCTGGT 789
> AT1G30980.1 | Symbols: | transposable element gene | chr1:11049583-11050729
REVERSE LENGTH=1147
Length=1147
Score = 488 bits (264), Expect = 4e-137
Identities = 431/508 (85%), Gaps = 26/508 (5%)
Strand=Plus/Minus
Query 426 TGAGAATGACGTCCTCCTCAACATTTCCTATTCCATATTCTTCAATAATTAAATCGTTCC 485
||||||||| || |||||||||||| ||||||||||||||||| | |||| ||||||||
Sbjct 734 TGAGAATGATGTTCTCCTCAACATTCCCTATTCCATATTCTTCTACAATTTCATCGTTCC 675
Query 486 ACTTGTTGTAATCGTAATCTTCGCCACTGCCTTCACTACCGTCTATAGTAGGATCGAGGG 545
||||||||||||| |||||||||||||| | ||||||||| || ||||||||||||| ||
Sbjct 674 ACTTGTTGTAATCATAATCTTCGCCACTACTTTCACTACCATCAATAGTAGGATCGATGG 615
Query 546 TACTTCCCCCCATAGATCCATCATCACCCTGATAATCATCATACCCAGCACCATCTTCGT 605
||||| ||| |||||||||||| |||||||||||||||||||||||| ||||||||||||
Sbjct 614 TACTT-CCCTCATAGATCCATCGTCACCCTGATAATCATCATACCCATCACCATCTTCGT 556
Query 606 TGTCCTCCTCCTCTTCTTCATCCTCATCTGTTTTATCGTCTTCAACGTCGTCTTGCTCAT 665
||||| || || | ||||||||||||||||||||||||||||||| |||||||| || ||
Sbjct 555 TGTCCCCCCCCCCATCTTCATCCTCATCTGTTTTATCGTCTTCAATGTCGTCTTCCTAAT 496
Query 666 CTACAGCCTCATTATTTCCATCTACATTTGAAACACTCCCACACACACGGT-A-----A- 718
|||| |||||||||||| |||| |||||| ||||||| |||||||||||| | |
Sbjct 495 CTACGGCCTCATTATTTTCATCAACATTTAAAACACTATCACACACACGGTCACTTTCAG 436
Query 719 C-TC-TCACCATCG-GTCCTAGGGACAGTATTCCCGAGTGCCTTGACGGTTGTAATGAAA 775
| || ||||||| | ||||||| |||| |||||| ||||| |||||| |||||||||| |
Sbjct 435 CATCGTCACCAT-GAGTCCTAGAGACATTATTCCTGAGTGTCTTGACAGTTGTAATGATA 377
Query 776 GAGACAAACAAGGTGACACTAGGATCCCCACCACGAATCAAAAAC-T-----C--A---T 824
|||||||||||| ||| | ||||| |||||||||||| ||||| | | | |
Sbjct 376 GAGACAAACAAGTTGAGAGAAGGATACCCACCACGAATAAAAAAAATTGTATCCCACCCT 317
Query 825 ---TTGATTGTCAATGTATACAGGAGGGCGTTTACTTTCTATCATCACTGACATCTTTCC 881
|||| |||||||||| ||||||||||||||| | |||||||||||| |||||| ||
Sbjct 316 CACTTGACTGTCAATGTAGACAGGAGGGCGTTTAGTATCTATCATCACTAACATCTCTCT 257
Query 882 CGGCATCCAGTAACTAATTATTGGATTG 909
||| ||||||||||||||||| ||||||
Sbjct 256 CGGTATCCAGTAACTAATTATGGGATTG 229
Score = 444 bits (240), Expect = 8e-124
Identities = 280/299 (94%), Gaps = 4/299 (1%)
Strand=Plus/Minus
Query 1 TCATACGATGTGATTTTGAAACATTCTGAATTCTTGACAACTTGAGCTGTCAAATGCCAT 60
||||||||||||||||||||| ||||| |||||||||| |||||||| |||||||| |||
Sbjct 1106 TCATACGATGTGATTTTGAAATATTCTTAATTCTTGACGACTTGAGCAGTCAAATGTCAT 1047
Query 61 GGACAAGTATCATCAACGCAGACCATCTCCAATCTTGTAGGACATGACCTACGTTGCTTG 120
|||||||||||||||||||| |||||| |||||||||||||| |||||||| ||||||||
Sbjct 1046 GGACAAGTATCATCAACGCATACCATCACCAATCTTGTAGGATATGACCTAGGTTGCTTG 987
Query 121 TAGC-AAAAGCATTGTTTGATTGCGAGATAAGACATTGTTTGTTGTATGACTTTTCTGTT 179
|||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 986 TAGCAAAAAG-ATTGTTTGATTGCGAGATAAGACATTGTTTGTTGTATGACTTTTCTGTT 928
Query 180 CTTAAAAACACTCTCCAATCTATAGTGTACGTACATTGGTACAAACCATGTTGACACGTA 239
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||
Sbjct 927 CTTAAAAACACTCTCCAATTTATAGTGTACGTACATTGGTACAAACCATGTTGACACATA 868
Query 240 CGT-CTTGGAGTCACCGTTGGTGTACGGTCACCCGAATGAGAAATGTTATCTCCGCCAG 297
|| ||||||||||| | ||||||||||||||||| ||||||||||||||||||||||
Sbjct 867 -GTTCTTGGAGTCACAGCTGGTGTACGGTCACCCGGGTGAGAAATGTTATCTCCGCCAG 810
Score = 78.7 bits (42), Expect = 9e-14
Identities = 53/58 (91%), Gaps = 2/58 (3%)
Strand=Plus/Minus
Query 369 GTGTACGTACATTGGTACAAACCATGTTGACACGTACGT-CTTGGAGTCACCGTTGGT 425
||||||||||||||||||||||||||||||||| || || ||||||||||| | ||||
Sbjct 903 GTGTACGTACATTGGTACAAACCATGTTGACACATA-GTTCTTGGAGTCACAGCTGGT 847
> AT3G59860.1 | Symbols: | transposable element gene | chr3:22113851-22114908
REVERSE LENGTH=1058
Length=1058
Score = 472 bits (255), Expect = 4e-132
Identities = 429/508 (84%), Gaps = 32/508 (6%)
Strand=Plus/Minus
Query 426 TGAGAATGACGTCCTCCTCAACATTTCCTATTCCATATTCTTCAATAATTAAATCGTTCC 485
|||||||||||| |||||||||||| ||||||||||||||||| | |||| ||||||||
Sbjct 673 TGAGAATGACGTTCTCCTCAACATTCCCTATTCCATATTCTTCTACAATTTCATCGTTCC 614
Query 486 ACTTGTTGTAATCGTAATCTTCGCCACTGCCTTCACTACCGTCTATAGTAGGATCGAGGG 545
||||||||||||| |||||||||||||| | ||||||||| || ||||||||||||| ||
Sbjct 613 ACTTGTTGTAATCATAATCTTCGCCACTACTTTCACTACCATCAATAGTAGGATCGATGG 554
Query 546 TACTTCCCCCCATAGATCCATCATCACCCTGATAATCATCATACCCAGCACCATCTTCGT 605
||||| |||||||||||||||| |||||||||||||||||||||||| ||||||||||||
Sbjct 553 TACTT-CCCCCATAGATCCATCGTCACCCTGATAATCATCATACCCATCACCATCTTCGT 495
Query 606 TGTCCTCCTCCTCTTCTTCATCCTCATCTGTTTTATCGTCTTCAACGTCGTCTTGCTCAT 665
|| |||| ||| ||||||||||||||||||||||||||||||| ||||||||||| ||
Sbjct 494 TG---TCCT-CTCATCTTCATCCTCATCTGTTTTATCGTCTTCAATGTCGTCTTGCTAAT 439
Query 666 CTACAGCCTCATTATTTCCATCTACATTTGAAACACTCCCACACACACGGT-A-----A- 718
|||| | |||||||||| |||| ||||| ||||||| ||||||||| || | |
Sbjct 438 CTACGGTCTCATTATTTTCATCAACATTA-AAACACTATCACACACACAGTCACTTTCAG 380
Query 719 C-TC-TCACCATCG-GTCCTAGGGACAGTATTCCCGAGTGCCTTGACGGTTGTAATGAAA 775
| || ||||||| | ||||||| |||| |||| ||||||| ||||||||||||||||||
Sbjct 379 CATCGTCACCAT-GAGTCCTAGAGACATTATTTCCGAGTGTATTGACGGTTGTAATGAAA 321
Query 776 GAGACAAACAAGGTGACACTAGGATCCCCACCACGAATCAAAAA---C-T--C--A---T 824
|||||||||||| ||| | ||||| |||||||||||| ||||| | | | | |
Sbjct 320 GAGACAAACAAGTTGAGAGAAGGATACCCACCACGAATAAAAAAAATCGTATCCCACCCT 261
Query 825 ---TTGATTGTCAATGTATACAGGAGGGCGTTTACTTTCTATCATCACTGACATCTTTCC 881
|||| |||||||||| ||||||||||||||| | |||| ||| ||| ||||| |||
Sbjct 260 CACTTGACTGTCAATGTAGACAGGAGGGCGTTTAGTATCTA-CATAACTAACATCACTCC 202
Query 882 CGGCATCCAGTAACTAATTATTGGATTG 909
||| |||||||||||||| || ||||||
Sbjct 201 CGGTATCCAGTAACTAATCATGGGATTG 174
Score = 433 bits (234), Expect = 2e-120
Identities = 276/297 (93%), Gaps = 0/297 (0%)
Strand=Plus/Minus
Query 1 TCATACGATGTGATTTTGAAACATTCTGAATTCTTGACAACTTGAGCTGTCAAATGCCAT 60
|||||||||||||||||||||||||||||||||||||| |||||||| |||||||| |||
Sbjct 1045 TCATACGATGTGATTTTGAAACATTCTGAATTCTTGACGACTTGAGCAGTCAAATGTCAT 986
Query 61 GGACAAGTATCATCAACGCAGACCATCTCCAATCTTGTAGGACATGACCTACGTTGCTTG 120
||||||||||||||||||| | |||| |||||||||||||| |||||||| |||||||
Sbjct 985 AGACAAGTATCATCAACGCATATCATCACCAATCTTGTAGGATATGACCTAGGTTGCTTA 926
Query 121 TAGCAAAAGCATTGTTTGATTGCGAGATAAGACATTGTTTGTTGTATGACTTTTCTGTTC 180
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 925 TAGCAAAAAAATTGTTTGATTGCGAGATAAGACATTGTTTGTTGTATGACTTTTCTGTTC 866
Query 181 TTAAAAACACTCTCCAATCTATAGTGTACGTACATTGGTACAAACCATGTTGACACGTAC 240
||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||
Sbjct 865 TTAAAAACACTCTCCAATCTATATTGTACGTACATTGGTACAAACCATGTTGACAAATAC 806
Query 241 GTCTTGGAGTCACCGTTGGTGTACGGTCACCCGAATGAGAAATGTTATCTCCGCCAG 297
|||||||||||| ||||||||||||||||| ||||||||||||||||||||||
Sbjct 805 TTCTTGGAGTCACAACTGGTGTACGGTCACCCGGGTGAGAAATGTTATCTCCGCCAG 749
Score = 75.0 bits (40), Expect = 1e-12
Identities = 46/49 (94%), Gaps = 0/49 (0%)
Strand=Plus/Minus
Query 370 TGTACGTACATTGGTACAAACCATGTTGACACGTACGTCTTGGAGTCAC 418
||||||||||||||||||||||||||||||| ||| ||||||||||||
Sbjct 841 TGTACGTACATTGGTACAAACCATGTTGACAAATACTTCTTGGAGTCAC 793
> AT2G16832.1 | Symbols: | transposable element gene | chr2:7293623-7294681
FORWARD LENGTH=1059
Length=1059
Score = 472 bits (255), Expect = 4e-132
Identities = 430/509 (84%), Gaps = 33/509 (6%)
Strand=Plus/Minus
Query 426 TGAGAATGACGTCCTCCTCAACATTTCCTATTCCATATTCTTCAATAATTAAATCGTTCC 485
|||||||||||| |||||||||||| ||||||||||||||||| | |||| |||| |||
Sbjct 674 TGAGAATGACGTTCTCCTCAACATTCCCTATTCCATATTCTTCTACAATTTCATCGCTCC 615
Query 486 ACTTGTTGTAATCGTAATCTTCGCCACTGCCTTCACTACCGTCTATAGTAGGATCGAGGG 545
|||| |||||||| | ||||| |||||| | ||||||||| || ||||||||||||| ||
Sbjct 614 ACTTCTTGTAATCAT-ATCTTTGCCACTACTTTCACTACCATCAATAGTAGGATCGATGG 556
Query 546 TACTTCCCCCCATAGATCCATCATCACCCTGATAATCATCATACCCAGCACCATCTTCGT 605
||||| |||||||||||||||| |||| ||||||||||||||||||| ||||||||||||
Sbjct 555 TACTT-CCCCCATAGATCCATCGTCACACTGATAATCATCATACCCATCACCATCTTCGT 497
Query 606 TGTCCTCCTCCTCTTCTTCATCCTCATCTGTTTTATCGTCTTCAACGTCGTCTTGCTCAT 665
||| | || || | |||||||||||||||||||||||||||||| ||||||||||| ||
Sbjct 496 TGT-C-CC-CC-CAACTTCATCCTCATCTGTTTTATCGTCTTCAATGTCGTCTTGCTAAT 441
Query 666 CTACAGCCTCATTATTTCCATCTACATTTGAAACACTCCCACACACACGGT-A-----A- 718
|||| |||||||||||| |||| |||||| ||||||| |||||||||||| | |
Sbjct 440 CTACGGCCTCATTATTTTCATCAACATTTAAAACACTATCACACACACGGTCACTTTCAG 381
Query 719 C-TC-TCACCATCG-GTCCTAGGGACAGTATTCCCGAGTGCCTTGACGGTTGTAATGAAA 775
| || ||||||| | ||||||| |||| |||||||||||| |||||||||||||||||||
Sbjct 380 CATCGTCACCAT-GAGTCCTAGAGACATTATTCCCGAGTGTCTTGACGGTTGTAATGAAA 322
Query 776 GAGACAAACAAGGTGACACTAGGATCCCCACCACGAATCAAAAA---C-T--C--A---T 824
||||||||||| ||| | ||||| |||||||||||| ||||| | | | | |
Sbjct 321 GAGACAAACAAATTGAGAGAAGGATACCCACCACGAATAAAAAAAATCGTATCCCACCCT 262
Query 825 ---TTGATTGTCAATGTATACAGGAGGGCGTTTACTTTCTATCATCACTGACATCTTTCC 881
|||| |||||||||| ||||||||||||||| | |||||||||||| |||||| |||
Sbjct 261 CACTTGACTGTCAATGTAGACAGGAGGGCGTTTAGTATCTATCATCACTAACATCTCTCC 202
Query 882 CGGCATCCAGTAACTAATTATTG-GATTG 909
||| ||||| ||||||||||| | |||||
Sbjct 201 CGGTATCCATTAACTAATTAT-GAGATTG 174
Score = 460 bits (249), Expect = 8e-129
Identities = 282/298 (95%), Gaps = 2/298 (1%)
Strand=Plus/Minus
Query 1 TCATACGATGTGATTTTGAAACATTCTGAATTCTTGACAACTTGAGCTGTCAAATGCCAT 60
|||||||||||||||||||||||||||||||||||||| || ||||| |||||||| |||
Sbjct 1046 TCATACGATGTGATTTTGAAACATTCTGAATTCTTGACGACATGAGCAGTCAAATGTCAT 987
Query 61 GGACAAGTATCATCAACGCAGACCATCTCCAATCTTGTAGGACATGACCTACGTTGCTTG 120
|||||||||||||||||||| |||||| |||||||||||||| |||||||| ||||||||
Sbjct 986 GGACAAGTATCATCAACGCATACCATCACCAATCTTGTAGGATATGACCTAGGTTGCTTG 927
Query 121 TAGC-AAAAGCATTGTTTGATTGCGAGATAAGACATTGTTTGTTGTATGACTTTTCTGTT 179
|||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 926 TAGCAAAAAG-ATTGTTTGATTGCGAGATAAGACATTGTTTGTTGTATGACTTTTCTGTT 868
Query 180 CTTAAAAACACTCTCCAATCTATAGTGTACGTACATTGGTACAAACCATGTTGACACGTA 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 867 CTTAAAAACACTCTCCAATCTATAGTGTACGTACATTGGTACAAACCATGTTGACACATA 808
Query 240 CGTCTTGGAGTCACCGTTGGTGTACGGTCACCCGAATGAGAAATGTTATCTCCGCCAG 297
| |||||||||||| | ||||||||||||||||| ||||||||||||||||||||||
Sbjct 807 CTTCTTGGAGTCACAGCTGGTGTACGGTCACCCGGGTGAGAAATGTTATCTCCGCCAG 750
Score = 84.2 bits (45), Expect = 2e-15
Identities = 53/57 (93%), Gaps = 0/57 (0%)
Strand=Plus/Minus
Query 369 GTGTACGTACATTGGTACAAACCATGTTGACACGTACGTCTTGGAGTCACCGTTGGT 425
||||||||||||||||||||||||||||||||| ||| |||||||||||| | ||||
Sbjct 843 GTGTACGTACATTGGTACAAACCATGTTGACACATACTTCTTGGAGTCACAGCTGGT 787
> AT1G17900.1 | Symbols: | transposable element gene | chr1:6157368-6158130
REVERSE LENGTH=763
Length=763
Score = 470 bits (254), Expect = 1e-131
Identities = 425/503 (84%), Gaps = 29/503 (6%)
Strand=Plus/Minus
Query 422 TGGT-TGAGAATGACGTCCTCCTCAACATTTCCTATTCCATATTCTTCAATAATTAAATC 480
|||| |||||||||||| |||||| | | | |||||||||||||| | ||||| |||
Sbjct 663 TGGTGTGAGAATGACGTTCTCCTC-A-A----C-ATTCCATATTCTTCTACAATTACATC 611
Query 481 GTTCCACTTGTTGTAATCGTAATCTTCGCCACTGCCTTCACTACCGTCTATAGTAGGATC 540
|||||||||||||||||| |||||||| |||| | ||||||||| || |||||||||||
Sbjct 610 GTTCCACTTGTTGTAATCACAATCTTCGTCACTACTTTCACTACCATCAATAGTAGGATC 551
Query 541 GAGGGTACTTCCCCCCATAGATCCATCATCACCCTGATAATCATCATACCCAGCACCATC 600
|||||||||||||||||||||| |||| |||||||||||||||||||||||| |||||||
Sbjct 550 GAGGGTACTTCCCCCCATAGATTCATCGTCACCCTGATAATCATCATACCCATCACCATC 491
Query 601 TTCGTTGTCCTCCTCCTCTTCTTCATCCTCATCTGTTTTATCGTCTTCAACGTCGTCTTG 660
|||||||||| ||| | ||| ||||||||||||||||||||||||||||| || ||||||
Sbjct 490 TTCGTTGTCCCCCT-C-CTT-TTCATCCTCATCTGTTTTATCGTCTTCAATGTTGTCTTG 434
Query 661 CTCATCTACAGCCTCATTATTTCCATCTACATTTGAAACACTCCCACACACACGGTAACT 720
||||||||| |||||||||||| |||| ||||||||||||| ||| || | | |
Sbjct 433 CTCATCTACGGCCTCATTATTTTCATCAACATTTGAAACACGGTCACTTTCA-GC-ATCG 376
Query 721 CTCACCATCG-GTCCTAGGGACAGTATTCCCGAGTGCCTTGACGGTTGTAATGAAAGAGA 779
||||||| | ||||||| |||| |||| ||||||| |||||||||||||||||||||||
Sbjct 375 -TCACCAT-GAGTCCTAGAGACATTATTTCCGAGTGTCTTGACGGTTGTAATGAAAGAGA 318
Query 780 CAAACAAGGTGACACTAGGATCCCCACCACGAATCAAAAA---C-T---CAT------TT 826
|||||||| ||| | ||||| || ||||||||| ||||| | | || ||
Sbjct 317 CAAACAAGTTGAGAGAAGGATACCTACCACGAATTAAAAAGAACGTATTCAACCCCACTT 258
Query 827 GATTGTCAATGTATACAGGAGGGCGTTTACTTTCTATCATCACTGACATCTTTCCCGGCA 886
|| |||||||||| ||||||||||||||| | |||||||||||| |||||| |||||| |
Sbjct 257 GACTGTCAATGTAGACAGGAGGGCGTTTAGTATCTATCATCACTAACATCTCTCCCGGAA 198
Query 887 TCCAGTAACTAATTATTGGATTG 909
|||||||||||||||| ||||||
Sbjct 197 TCCAGTAACTAATTATGGGATTG 175
> AT5G28637.1 | Symbols: | transposable element gene | chr5:10645026-10646093
REVERSE LENGTH=1068
Length=1068
Score = 448 bits (242), Expect = 6e-125
Identities = 430/515 (83%), Gaps = 36/515 (7%)
Strand=Plus/Minus
Query 426 TGAGAATGACGTCCTCCTCAACATTTCCTATTCCATATTCTTCAATAATTAAATCGTTCC 485
|||||||||||| |||||||||||| ||||||||||||||||| | || || ||||||||
Sbjct 683 TGAGAATGACGTTCTCCTCAACATTCCCTATTCCATATTCTTCTACAACTACATCGTTCC 624
Query 486 ACTTGTTGTAATCGTAATCTTCGCCACTGCCTTCACTACCGTCTATAGTAGGATCGAGGG 545
||||||||||||| |||| ||||||||| | || |||||| || ||||||||||||||||
Sbjct 623 ACTTGTTGTAATCATAATTTTCGCCACTACTTTAACTACCATCAATAGTAGGATCGAGGG 564
Query 546 TACTT-------CCCCCCATAGATCCATCATCACCCTGATAATCATCATACCCAGCACCA 598
||||| ||||||||||||||||| | |||||||||||||||||||||| ||||
Sbjct 563 TACTTCCCCCCCCCCCCCATAGATCCATCGTTACCCTGATAATCATCATACCCATCACCG 504
Query 599 TCTTCGTTGTCCTCCTCCTCTTCTTCATCCTCATCTGTTTTATCGTCTTCAACGTCGTCT 658
||||| |||| | || |||| |||||||||||||||||||||||||||||||||||||||
Sbjct 503 TCTTCATTGT-C-CC-CCTCCTCTTCATCCTCATCTGTTTTATCGTCTTCAACGTCGTCT 447
Query 659 TGCTCATCTACAGCCTCATTATTTCCATCTA-CATTTGAAACACTCCCACACACACGGT- 716
| |||||||| |||||||||||| ||| || |||||||| |||| ||||||||||||
Sbjct 446 TCCTCATCTATGGCCTCATTATTTTCAT-TAACATTTGAAGCACTATCACACACACGGTC 388
Query 717 A-----A-C-TC-TCACCATCG-GTCCTAGGGACAGTATTCCCGAGTGCCTTGACGGTTG 767
| | | || ||||||| | ||||||| |||| |||||||||||| |||||||||||
Sbjct 387 ACTTTCAGCATCGTCACCAT-GAGTCCTAGAGACATTATTCCCGAGTGTCTTGACGGTTG 329
Query 768 TAATGAAAGAGACAAACAAGGTGACACTAGGATCCCCACCACGAATCAAAAA---C-T-- 821
|||||||||||||||||||| ||| | ||||| || ||||||||||||||| | |
Sbjct 328 TAATGAAAGAGACAAACAAGTTGAGAGAAGGATACCGACCACGAATCAAAAAGAACGTAT 269
Query 822 C-A-T-----TTGATTGTCAATGTATACAGGAGGGCGTTTACTTTCTATCATCACTGACA 874
| | | |||| | |||||| | ||| ||||||||| | | |||||||| ||| |||
Sbjct 268 CCAATCCCACTTGACTATCAATGAAGACAAGAGGGCGTTGAGTATCTATCATGACTAACA 209
Query 875 TCTTTCCCGGCATCCAGTAACTAATTATTGGATTG 909
||| ||||| |||| ||||||||||||| ||||||
Sbjct 208 TCTCTCCCGACATCTAGTAACTAATTATGGGATTG 174
Score = 422 bits (228), Expect = 4e-117
Identities = 275/298 (92%), Gaps = 2/298 (1%)
Strand=Plus/Minus
Query 1 TCATACGATGTGATTTTGAAACATTCTGAATTCTTGACAACTTGAGCTGTCAAATGCCAT 60
||||| ||||| |||||||||||||||||||||||||| |||||||| |||||||| |||
Sbjct 1055 TCATAGGATGTAATTTTGAAACATTCTGAATTCTTGACGACTTGAGCAGTCAAATGTCAT 996
Query 61 GGACAAGTATCATCAACGCAGACCATCTCCAATCTTGTAGGACATGACCTACGTTGCTTG 120
|||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||
Sbjct 995 GGACAAGTATCATCAACGCATACCATCTCCAATCTTGTAGGACATGACCTAGGTTGCTTG 936
Query 121 TAGCAAAAGCATTGTTTGATTGCGAGATAAGACATTGTTTGTTGTATGACTTTTCTGTTC 180
|||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 935 TAGCAAAAAAATTGTTTGATTGTGAGATAAGACATTGTTTGTTGTATGACTTTTCTGTTG 876
Query 181 TTAAAAACACTCTCC-AATCTATAGTGTACGTACATTGGTACAAACCATGTTGACACGTA 239
||||||||||| ||| |||||||||| || ||||||||||||||||||||||||||| ||
Sbjct 875 TTAAAAACACT-TCCCAATCTATAGTATATGTACATTGGTACAAACCATGTTGACACATA 817
Query 240 CGTCTTGGAGTCACCGTTGGTGTACGGTCACCCGAATGAGAAATGTTATCTCCGCCAG 297
| ||||||||| || | |||||||||||||||||| |||||||| ||||||||| |||
Sbjct 816 CTTCTTGGAGTTACAGCTGGTGTACGGTCACCCGAGTGAGAAATATTATCTCCGTCAG 759
> AT1G32505.1 | Symbols: | transposable element gene | chr1:11753254-11754123
FORWARD LENGTH=870
Length=870
Score = 427 bits (231), Expect = 8e-119
Identities = 414/499 (83%), Gaps = 25/499 (5%)
Strand=Plus/Minus
Query 426 TGAGAATGACGTCCTCCTCAACATTTCC-TATTCCATATTCTTCAATAATTAAATCGTTC 484
|||||||||||| |||||||||| |||| |||||||||||||| | ||||| |||||||
Sbjct 551 TGAGAATGACGTTCTCCTCAACA-TTCCATATTCCATATTCTTTTACAATTATATCGTTC 493
Query 485 CACTTGTTGTAATCGTAATCTTCGCCACTGCCTTCACTACCGTCTATAGTAGGATCGAGG 544
|||||||||||||| |||||||||||| | | |||| |||| || |||||||||||||||
Sbjct 492 CACTTGTTGTAATCATAATCTTCGCCAGTACTTTCATTACCATCAATAGTAGGATCGAGG 433
Query 545 GTACTTCCCCCCATAGATCCATCATCACCCTGATAATCATCATACCCAGCACCATCTTCG 604
|||||| |||||||||||||||| |||||||||||||||||||||||| ||||||||| |
Sbjct 432 GTACTTTCCCCCATAGATCCATCGTCACCCTGATAATCATCATACCCATCACCATCTTTG 373
Query 605 TTGTCCTCCTCCTCTTCTTCATCCTCATCTGTTTTATCGTCTTCAACGTCGTCTTGCTCA 664
|||| | || |||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 372 TTGT-C-CC-CCTCCTCTTCATCCTCATCTGTTTTATCGTCTTCAACGTCGTCTTGCTCA 316
Query 665 TCTACAGCCTCATTATTTCCATCTACATTTGAAACACTCCCACACACACGGT-A-----A 718
||||| | |||||||||| |||| |||||||||||||| |||||||||||| | |
Sbjct 315 TCTACGGTCTCATTATTTTCATCAACATTTGAAACACTATCACACACACGGTCACTTTCA 256
Query 719 -C-TC-TCACCATCG-GTCCTAGGGACAGTATTCCCGAGTGCCTTGACGGTTGTA-ATGA 773
| || ||||||| | |||||| |||| |||||||||||| |||||||| | | |
Sbjct 255 GCATCGTCACCAT-GAGTCCTAAAGACATTATTCCCGAGTGTCTTGACGGACAAACAAGT 197
Query 774 AAGAGACAAACA-AGGTGACACTAGGA-TCCCCACCA-CGAATCAAAAACTCATTTGATT 830
|||| || | | ||| | | || || | | || ||| || | || |||| |
Sbjct 196 T-GAGAGAAGGATACC-GAC-C-ACGAATCAAAAAGAACGTATCCAACCC-CACTTGACT 142
Query 831 GTCAATGTATACAGGAGGGCGTTTACTTTCTATCATCACTGACATCTTTCCCGGCATCCA 890
||||||||| |||||| | |||||| | |||||||||||| |||||| ||| ||||||||
Sbjct 141 GTCAATGTAGACAGGAAGACGTTTAGTATCTATCATCACTAACATCTCTCCTGGCATCCA 82
Query 891 GTAACTAATTATTGGATTG 909
|||||||||||| ||||||
Sbjct 81 GTAACTAATTATGGGATTG 63
Score = 351 bits (190), Expect = 5e-96
Identities = 228/246 (93%), Gaps = 4/246 (2%)
Strand=Plus/Minus
Query 54 ATGCCATGGACAAGTATCATCAACGCAGACCATCTCCAATCTTGTAGGACATGACCTACG 113
||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
Sbjct 870 ATGTCATGGACAAGTATCATCAACGCAAACCATCTCCAATCTTGTAGGACATGACCTAGG 811
Query 114 TTGCTTGTAGC-AAAAGCATTGTTTGATTGCGAGATAAGACATTGTTTGTTGTATGACTT 172
||||||||||| ||||| ||||||||||||| ||||||||||||||||||||||||||||
Sbjct 810 TTGCTTGTAGCAAAAAG-ATTGTTTGATTGCAAGATAAGACATTGTTTGTTGTATGACTT 752
Query 173 TTCTGTTCTTAAAAACACTCTCC-AATCTATAGTGTACGTACATTGGTACAAACCATGTT 231
||||||| ||||||||||| ||| ||||||||||||||||||| ||||||||||||||||
Sbjct 751 TTCTGTTTTTAAAAACACT-TCCCAATCTATAGTGTACGTACAATGGTACAAACCATGTT 693
Query 232 GACACGTACGTCTTGGAGTCACCGTTGGTGTACGGTCACCCGAATGAGAAATGTTATCTC 291
||||| ||| |||||||||||| ||||||| |||||||||| |||||||||||||||
Sbjct 692 GACACATACTTCTTGGAGTCACAACTGGTGTATGGTCACCCGAGTGAGAAATGTTATCTT 633
Query 292 CGCCAG 297
||||||
Sbjct 632 CGCCAG 627
> AT3G45120.1 | Symbols: | transposable element gene | chr3:16511730-16512050
REVERSE LENGTH=321
Length=321
Score = 254 bits (137), Expect = 1e-66
Identities = 266/323 (82%), Gaps = 29/323 (9%)
Strand=Plus/Minus
Query 577 ATAATCATCATACCCAGCACCATCTTCGTTGTCCTCCTCCTCTTCTTCATCCTCATCTGT 636
|||| ||||||||||| ||||||||||||||| | || |||| |||||||||||||||||
Sbjct 318 ATAAGCATCATACCCATCACCATCTTCGTTGT-C-CC-CCTCCTCTTCATCCTCATCTGT 262
Query 637 TTTATCGTCTTCAACGTCGTCTTGCTCATCTAC-AGCCTCATTATTTCCATCTACATTTG 695
||||||||||||||||||||||||||||||||| | ||||||||||| |||| |||||||
Sbjct 261 TTTATCGTCTTCAACGTCGTCTTGCTCATCTACGA-CCTCATTATTTTCATCAACATTTG 203
Query 696 AAACACTCCCACACACACGGT-A-----A-C-TC-TCACCATCG-GTCCTAGGGACAGTA 745
||||||| ||||||||| || | | | || ||||||| | || |||| |||| ||
Sbjct 202 AAACACTATCACACACACAGTCACTTTCAGCATCGTCACCAT-GAGTTCTAGAGACATTA 144
Query 746 TTCCCGAGTGCCTTGACGGTTGTAATGAAAGAGACAAACAAGGTGACACTAGGATCCCCA 805
|| ||||||| ||||||||||||||| ||||||||||||||| ||| | ||||| | |
Sbjct 143 TTTCCGAGTGTCTTGACGGTTGTAATAAAAGAGACAAACAAGTTGAGAGAAGGATACTGA 84
Query 806 CCACGAATCAAAAA---C-T---CAT------TTGATTGTCAATGTATACAGGAGGGCGT 852
|||||||| ||||| | | || |||| |||||||||| ||||||||||||
Sbjct 83 CCACGAATAAAAAAGAACGTATTCAACCCCACTTGACTGTCAATGTAGACAGGAGGGCGT 24
Query 853 TTACTTTCTATCATCACTGACAT 875
||| | |||||||||||| ||||
Sbjct 23 TTAGTATCTATCATCACTAACAT 1
> AT2G16820.1 | Symbols: | transposable element gene | chr2:7290104-7290952
REVERSE LENGTH=606
Length=606
Score = 237 bits (128), Expect = 1e-61
Identities = 158/172 (92%), Gaps = 3/172 (2%)
Strand=Plus/Minus
Query 488 TTGTTGTAATCGTAATCTTCGCCACTGCCTTCACTACCGTCTATAGTAGGATCGAGGGTA 547
||||||||||| |||||||||||||| | ||||||||| || ||||||||||||| || |
Sbjct 379 TTGTTGTAATCATAATCTTCGCCACTACTTTCACTACCATCAATAGTAGGATCGAAGGCA 320
Query 548 CTTCCCCCCATAGATCCATCATCACCCTGATAATCATCATACCCAGCACCATCTTCGTTG 607
|||| ||||||||||||||| |||||||||||||||||||||||| ||||||||||||||
Sbjct 319 CTTCTCCCCATAGATCCATCGTCACCCTGATAATCATCATACCCATCACCATCTTCGTTG 260
Query 608 TCCTCCTCCTCTTCTTCATCCTCATCTGTTTTATCGTCTTCAACGTCGTCTT 659
| | || |||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 259 T-C-CC-CCTCCTCTTCATCCTCATCTGTTTTATCGTCTTCAACGTCGTCTT 211
> AT4G05584.1 | Symbols: | transposable element gene | chr4:2864901-2865581
FORWARD LENGTH=681
Length=681
Score = 222 bits (120), Expect = 4e-57
Identities = 169/191 (88%), Gaps = 9/191 (5%)
Strand=Plus/Minus
Query 1 TCATACGATGTGATTTTGAAACATTCTGAATTCTTGACAACTTGAGCTGTCAAATGCCAT 60
|||||| |||||||||||||||||||||| |||||||| |||||||| |||||||| ||
Sbjct 345 TCATACTATGTGATTTTGAAACATTCTGAGTTCTTGACGACTTGAGCAGTCAAATGTAAT 286
Query 61 GGACAAGTATCATCAACGCAGACCATCTCCAATCTTGTAGGACATGACCTACGTTGCTTG 120
|||||||||||||||| ||| || ||||||||||||||||| |||| || |||
Sbjct 285 GGACAAGTATCATCAATGCAAACTATCTCCAATCTTGTAGGCCATG----AC----CTTA 234
Query 121 TAGCAAAAGCATTGTTTGATTGCGAGAT-AAGACATTGTTTGTTGTATGACTTTTCTGTT 179
||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 233 TAGCAAAAGTATTGTTTGATTGCGAGATAAAGACATTGTTTGTTGTATGACTTTTCTGTT 174
Query 180 CTTAAAAACAC 190
|||| ||||||
Sbjct 173 CTTAGAAACAC 163
> AT4G05583.2 | Symbols: | transposable element gene | chr4:2860476-2861486
FORWARD LENGTH=1011
Length=1011
Score = 130 bits (70), Expect = 2e-29
Identities = 78/82 (95%), Gaps = 0/82 (0%)
Strand=Plus/Minus
Query 109 CTACGTTGCTTGTAGCAAAAGCATTGTTTGATTGCGAGATAAGACATTGTTTGTTGTATG 168
||| ||||||| |||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 244 CTAGGTTGCTTATAGCAAAAGCATTGTTTGATTGCGAGATAAAACATTGTTTGTTGTATG 185
Query 169 ACTTTTCTGTTCTTAAAAACAC 190
||||||||||||||| ||||||
Sbjct 184 ACTTTTCTGTTCTTAGAAACAC 163
> AT2G06600.1 | Symbols: | transposable element gene | chr2:2639598-2642549
FORWARD LENGTH=2952
Length=2952
Score = 73.1 bits (39), Expect = 4e-12
Identities = 59/69 (86%), Gaps = 0/69 (0%)
Strand=Plus/Minus
Query 335 ACCTTCGTAGCCTGTATCTTGTACACATTCTGTTGTGTACGTACATTGGTACAAACCATG 394
||||||| | | ||| |||| | |||| || | ||||||||||||||||||||||||||
Sbjct 849 ACCTTCGCATCTTGTCTCTTCTGCACAGACTCTAGTGTACGTACATTGGTACAAACCATG 790
Query 395 TTGACACGT 403
|||||||||
Sbjct 789 TTGACACGT 781
Score = 71.3 bits (38), Expect = 2e-11
Identities = 60/70 (86%), Gaps = 4/70 (6%)
Strand=Plus/Minus
Query 202 TAGTGTACGTACATTGGTACAAACCATGTTGACACGTACGTCT-TGGAGTCACCG-TTGG 259
||||||||||||||||||||||||||||||||||||| || ||||| || | ||||
Sbjct 817 TAGTGTACGTACATTGGTACAAACCATGTTGACACGT-CGGGGATGGAG-CAGAGGTTGG 760
Query 260 TGTACGGTCA 269
||||| ||||
Sbjct 759 TGTACTGTCA 750
> AT5G28487.1 | Symbols: | transposable element gene | chr5:10441691-10445995
REVERSE LENGTH=4305
Length=4305
Score = 71.3 bits (38), Expect = 2e-11
Identities = 60/70 (86%), Gaps = 4/70 (6%)
Strand=Plus/Minus
Query 202 TAGTGTACGTACATTGGTACAAACCATGTTGACACGTACGTCT-TGGAGTCACCG-TTGG 259
||||||||||||||||||||||||||||||||||||| || ||||| || | ||||
Sbjct 820 TAGTGTACGTACATTGGTACAAACCATGTTGACACGT-CGGGGATGGAG-CAGAGGTTGG 763
Query 260 TGTACGGTCA 269
||||| ||||
Sbjct 762 TGTACAGTCA 753
Score = 67.6 bits (36), Expect = 2e-10
Identities = 58/69 (84%), Gaps = 0/69 (0%)
Strand=Plus/Minus
Query 335 ACCTTCGTAGCCTGTATCTTGTACACATTCTGTTGTGTACGTACATTGGTACAAACCATG 394
||||||| | | ||| || | | |||| || | ||||||||||||||||||||||||||
Sbjct 852 ACCTTCGCATCTTGTCTCCTCTGCACAGACTCTAGTGTACGTACATTGGTACAAACCATG 793
Query 395 TTGACACGT 403
|||||||||
Sbjct 792 TTGACACGT 784
> AT2G05490.1 | Symbols: | transposable element gene | chr2:2006873-2009701
REVERSE LENGTH=2829
Length=2829
Score = 71.3 bits (38), Expect = 2e-11
Identities = 60/70 (86%), Gaps = 4/70 (6%)
Strand=Plus/Minus
Query 202 TAGTGTACGTACATTGGTACAAACCATGTTGACACGTACGTCT-TGGAGTCACCG-TTGG 259
||||||||||||||||||||||||||||||||||||| || ||||| || | ||||
Sbjct 820 TAGTGTACGTACATTGGTACAAACCATGTTGACACGT-CGGGGATGGAG-CAGAGGTTGG 763
Query 260 TGTACGGTCA 269
||||| ||||
Sbjct 762 TGTACAGTCA 753
Score = 65.8 bits (35), Expect = 7e-10
Identities = 35/35 (100%), Gaps = 0/35 (0%)
Strand=Plus/Minus
Query 369 GTGTACGTACATTGGTACAAACCATGTTGACACGT 403
|||||||||||||||||||||||||||||||||||
Sbjct 818 GTGTACGTACATTGGTACAAACCATGTTGACACGT 784
> AT2G12150.1 | Symbols: | transposable element gene | chr2:4884407-4887236
REVERSE LENGTH=2830
Length=2830
Score = 71.3 bits (38), Expect = 2e-11
Identities = 60/70 (86%), Gaps = 4/70 (6%)
Strand=Plus/Minus
Query 202 TAGTGTACGTACATTGGTACAAACCATGTTGACACGTACGTCT-TGGAGTCACCG-TTGG 259
||||||||||||||||||||||||||||||||||||| || ||||| || | ||||
Sbjct 820 TAGTGTACGTACATTGGTACAAACCATGTTGACACGT-CGGGGATGGAG-CAGAGGTTGG 763
Query 260 TGTACGGTCA 269
||||| ||||
Sbjct 762 TGTACAGTCA 753
Score = 67.6 bits (36), Expect = 2e-10
Identities = 58/69 (84%), Gaps = 0/69 (0%)
Strand=Plus/Minus
Query 335 ACCTTCGTAGCCTGTATCTTGTACACATTCTGTTGTGTACGTACATTGGTACAAACCATG 394
||||||| | | ||| || | | |||| || | ||||||||||||||||||||||||||
Sbjct 852 ACCTTCGCATCTTGTCTCCTCTGCACAGACTCTAGTGTACGTACATTGGTACAAACCATG 793
Query 395 TTGACACGT 403
|||||||||
Sbjct 792 TTGACACGT 784
> AT1G45070.1 | Symbols: | transposable element gene | chr1:17035871-17038630
FORWARD LENGTH=2760
Length=2760
Score = 71.3 bits (38), Expect = 2e-11
Identities = 60/70 (86%), Gaps = 4/70 (6%)
Strand=Plus/Minus
Query 202 TAGTGTACGTACATTGGTACAAACCATGTTGACACGTACGTCT-TGGAGTCACCG-TTGG 259
||||||||||||||||||||||||||||||||||||| || ||||| || | ||||
Sbjct 820 TAGTGTACGTACATTGGTACAAACCATGTTGACACGT-CGGGGATGGAG-CAGAGGTTGG 763
Query 260 TGTACGGTCA 269
||||| ||||
Sbjct 762 TGTACAGTCA 753
Score = 65.8 bits (35), Expect = 7e-10
Identities = 35/35 (100%), Gaps = 0/35 (0%)
Strand=Plus/Minus
Query 369 GTGTACGTACATTGGTACAAACCATGTTGACACGT 403
|||||||||||||||||||||||||||||||||||
Sbjct 818 GTGTACGTACATTGGTACAAACCATGTTGACACGT 784
> AT3G28110.1 | Symbols: | transposable element gene | chr3:10461763-10462827
FORWARD LENGTH=1065
Length=1065
Score = 69.4 bits (37), Expect = 6e-11
Identities = 37/37 (100%), Gaps = 0/37 (0%)
Strand=Plus/Minus
Query 202 TAGTGTACGTACATTGGTACAAACCATGTTGACACGT 238
|||||||||||||||||||||||||||||||||||||
Sbjct 820 TAGTGTACGTACATTGGTACAAACCATGTTGACACGT 784
Score = 67.6 bits (36), Expect = 2e-10
Identities = 58/69 (84%), Gaps = 0/69 (0%)
Strand=Plus/Minus
Query 335 ACCTTCGTAGCCTGTATCTTGTACACATTCTGTTGTGTACGTACATTGGTACAAACCATG 394
||||||| | | ||| || | | |||| || | ||||||||||||||||||||||||||
Sbjct 852 ACCTTCGCATCTTGTCTCCTCTGCACAGACTCTAGTGTACGTACATTGGTACAAACCATG 793
Query 395 TTGACACGT 403
|||||||||
Sbjct 792 TTGACACGT 784
> AT2G16150.1 | Symbols: | transposable element gene | chr2:7009205-7011913
FORWARD LENGTH=2709
Length=2709
Score = 69.4 bits (37), Expect = 6e-11
Identities = 37/37 (100%), Gaps = 0/37 (0%)
Strand=Plus/Minus
Query 202 TAGTGTACGTACATTGGTACAAACCATGTTGACACGT 238
|||||||||||||||||||||||||||||||||||||
Sbjct 820 TAGTGTACGTACATTGGTACAAACCATGTTGACACGT 784
Score = 67.6 bits (36), Expect = 2e-10
Identities = 58/69 (84%), Gaps = 0/69 (0%)
Strand=Plus/Minus
Query 335 ACCTTCGTAGCCTGTATCTTGTACACATTCTGTTGTGTACGTACATTGGTACAAACCATG 394
||||||| | | ||| || | | |||| || | ||||||||||||||||||||||||||
Sbjct 852 ACCTTCGCATCTTGTCTCCTCTGCACAGACTCTAGTGTACGTACATTGGTACAAACCATG 793
Query 395 TTGACACGT 403
|||||||||
Sbjct 792 TTGACACGT 784
> AT3G42626.1 | Symbols: | transposable element gene | chr3:14717888-14720449
REVERSE LENGTH=2562
Length=2562
Score = 65.8 bits (35), Expect = 7e-10
Identities = 57/67 (85%), Gaps = 4/67 (6%)
Strand=Plus/Minus
Query 205 TGTACGTACATTGGTACAAACCATGTTGACACGTACGTCT-TGGAGTCACCG-TTGGTGT 262
|||||||||||||||||||||||||||||||||| || ||||| || | |||||||
Sbjct 621 TGTACGTACATTGGTACAAACCATGTTGACACGT-CGGGGATGGAG-CAGAGATTGGTGT 564
Query 263 ACGGTCA 269
|| ||||
Sbjct 563 ACTGTCA 557
Score = 63.9 bits (34), Expect = 3e-09
Identities = 34/34 (100%), Gaps = 0/34 (0%)
Strand=Plus/Minus
Query 370 TGTACGTACATTGGTACAAACCATGTTGACACGT 403
||||||||||||||||||||||||||||||||||
Sbjct 621 TGTACGTACATTGGTACAAACCATGTTGACACGT 588
> AT1G29075.1 | Symbols: | transposable element gene | chr1:10153543-10154701
FORWARD LENGTH=1159
Length=1159
Score = 65.8 bits (35), Expect = 7e-10
Identities = 35/35 (100%), Gaps = 0/35 (0%)
Strand=Plus/Minus
Query 202 TAGTGTACGTACATTGGTACAAACCATGTTGACAC 236
|||||||||||||||||||||||||||||||||||
Sbjct 819 TAGTGTACGTACATTGGTACAAACCATGTTGACAC 785
Score = 62.1 bits (33), Expect = 9e-09
Identities = 33/33 (100%), Gaps = 0/33 (0%)
Strand=Plus/Minus
Query 369 GTGTACGTACATTGGTACAAACCATGTTGACAC 401
|||||||||||||||||||||||||||||||||
Sbjct 817 GTGTACGTACATTGGTACAAACCATGTTGACAC 785
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 44406985948
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5