BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg481669
Length=2439
Score E
Sequences producing significant alignments: (Bits) Value
AT2G28360.1 | Symbols: | SIT4 phosphatase-associated family pr... 2582 0.0
AT1G07990.1 | Symbols: | SIT4 phosphatase-associated family pr... 1598 0.0
> AT2G28360.1 | Symbols: | SIT4 phosphatase-associated family
protein | chr2:12124415-12130069 REVERSE LENGTH=2746
Length=2746
Score = 2582 bits (1398), Expect = 0.0
Identities = 1524/1586 (96%), Gaps = 4/1586 (0%)
Strand=Plus/Plus
Query 148 GTGGAGTCGATACTAGACAAAGACAGTTTCACTTTGGAAGAGCTTCTTGATGAGGAAGAG 207
|||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||
Sbjct 230 GTGGAGTCGATACTAGACAAAGACAGTTTCACATTGGAAGAGCTTCTTGACGAGGAAGAG 289
Query 208 ATTATTCAAGAATGCAAAGCTTTGAATAGCCGACTCATAAATTTTCTAAGGGATAAAACT 267
|||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||
Sbjct 290 ATTATTCAAGAATGCAAAGCTTTGAATAGCCGACTCATTAATTTTCTAAGGGAAAAAACT 349
Query 268 CAAGTGGACCAACTTTTGCGGTATGTTGTTGAAGAGCCTGAGGACGATGCTGATAGCAAA 327
|||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 350 CAAGTGGAGAAACTATTGCGGTATGTTGTTGAAGAGCCTGAGGACGATGCTGATAGCAAA 409
Query 328 CGTGCTTTCAAGTTTCCATTTATCTCTTGTGAGATATTTACATGTGAGATTGATGTTATT 387
|||||||||||||||||||| |||||||| |||||||| |||||||||||||||||||||
Sbjct 410 CGTGCTTTCAAGTTTCCATTCATCTCTTGCGAGATATTCACATGTGAGATTGATGTTATT 469
Query 388 CTTAAGACTTTGGTGGAGGATGAGAAGCTGATGGATTTGCTGTTTGGATTTTTGGAACCG 447
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 470 CTTAAGACTTTGGTGGAGGATGAGAAGCTGATGGATTTGCTATTTGGATTTTTGGAACCG 529
Query 448 AATCGTCCTCATAGTGCGTTGCTGGCAGGCTATTTCGGAAAGGTTGTCATATGTTTGATG 507
|||||||||||||||||||||||||||||||| ||||| ||||||||||||||| | |||
Sbjct 530 AATCGTCCTCATAGTGCGTTGCTGGCAGGCTACTTCGGCAAGGTTGTCATATGTCTCATG 589
Query 508 ATCAGAAAGACTGCAGCACTTATGAAATATATAAAAGGGCATGGAAATGTGTTTAGCCAG 567
||| |||||||| |||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 590 ATCCGAAAGACTTCAGCACTTATGAGCTATATAAAAGGGCATGGAAATGTGTTTAGCCAG 649
Query 568 TTGGTTGATTTAATTGGAATAACATCCATCATGGAGGTTTTAGTTCGCTTGGTTGGGGCT 627
|| |||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||
Sbjct 650 TTAGTTGATTTAATTGGAATAACATCCATAATGGAGGTTTTGGTTCGCTTGGTTGGAGCT 709
Query 628 GATGATCATGTCTATCCCAATTTTCCGGATGTGATGCGATACTTGGCTGATAGTGATTTA 687
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 710 GATGATCATGTCTATCCCAATTTTCCGGATGTGATGCGATACTTGGCTGATAGCGATTTA 769
Query 688 CTTGAAATGATCGTGGACAAACTAAACT-CATCTAGTCCTCCTGAGGTTCAGGCAAACGC 746
|||||||||||||| |||||| |||| | |||||||||||||||||||||||||||||||
Sbjct 770 CTTGAAATGATCGTCGACAAATTAAA-TCCATCTAGTCCTCCTGAGGTTCAGGCAAACGC 828
Query 747 AGCAGAAACATTATGTGCAATTACTCGAAATGCACCTTCAGCTCTAGCTACAAAACTCTC 806
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 829 AGCAGAAACATTATGTGCAATTACTCGAAATGCACCTTCAGCTCTAGCTACAAAACTCTC 888
Query 807 TAGCCCTGGCTTCGTTTCTAGGATATTTGGTCATGCTATAGAAGATTCACATTCAAAATC 866
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 889 TAGCCCTGGCTTCGTTTCTAGGATATTTGGTCATGCTATAGAAGATTCTCATTCAAAATC 948
Query 867 TGGCCTAGTTCATTCACTTACTGTATGTATCTCTCTGTTAGATCCAAGGAGATCTGCTGT 926
||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| ||
Sbjct 949 TGGCCTAGTCCATTCACTTACTGTATGTATCTCTCTGTTAGATCCGAGGAGATCTGGTGC 1008
Query 927 TTCATCGCCTTTCTTCAATTCTTTTAGAGGTCAACATATGTTTGAGTCTCCTGTCCCAGT 986
||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||
Sbjct 1009 TTCATCGCCTTTCTTCAATTCTTATAGAGGTCAAAATATGTTTGAGTCTCCTGTCCCAGT 1068
Query 987 GAGCCAGGAGACTATTGGTGCCATGCTACCAAAACTCGGTGACATGCTTGTGCTGCTCAG 1046
|| ||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||
Sbjct 1069 GACCCAGGAGACTATTGGTGCCATGCTACCTAAACTCGGTGACATGCTTGTGCTTCTCAG 1128
Query 1047 TGTAGCGTCTGACAGCAAAGTCTTACCTACAACGTATGGAGAGCTGAGGCCGCCTCTTGG 1106
|||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1129 TGTAACGTCTGACAGCAAAGTCTTACCTACAACATATGGAGAGCTGAGGCCGCCTCTTGG 1188
Query 1107 AAAGCATCGCTTGAAGATTGTAGAATTTATTGCGGTGCTGTTAAAATCTGGAAATGAAGC 1166
||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||
Sbjct 1189 AAAGCATCGCTTGAAGATTGTAGAATTCATTGCGGTTCTGTTAAAATCTGGAAATGAAGC 1248
Query 1167 TGCTGGAACTGAATTAGCAAGCTCTGGAACAATTAAAAGGATCCTTGAACTATTTTTCGA 1226
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||
Sbjct 1249 TGCTGGAACTGAATTAGCAATCTCTGGAACAATTAAAAGGATCCTTGAACTATTTTTTGA 1308
Query 1227 GTACCCATACAATAATGCTCTCCATCACCAAGTGGAGAGTATAATACTTTCTTGTTTGGA 1286
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1309 GTACCCATACAATAATGCTCTCCATCACCAAGTGGAGAGTATAATACTTTCTTGTTTGGA 1368
Query 1287 AAATAAGAGCGAAATTATGGTTAACCATATCCTTCAAGAATGCAATCTGATTAGCAAAAT 1346
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1369 AAATAAGAGCGAAATTATGGTTAACCATATCCTTCAAGATTGCAATCTGATTAGCAAAAT 1428
Query 1347 TCTTTCATCAGACAAGGACTCGGTTCTTTCTGGCGATAACTTGCCTACCGTAGTTGCCAC 1406
||||||||||||||| ||||||| |||||||||||||||| |||||||||||||||||||
Sbjct 1429 TCTTTCATCAGACAAAGACTCGGCTCTTTCTGGCGATAACCTGCCTACCGTAGTTGCCAC 1488
Query 1407 TGGGAAAAAACCACCGCGGGTTGGATATGTTGGACATATCACAAGACTATGGAATAAACT 1466
||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1489 TGGGAAAAAACCACCACGGGTTGGATATGTTGGACATATCACAAGACTGTGGAATAAACT 1548
Query 1467 TGTCCAGTTGAGTGATAGCAATAGCC-TCATAAAGACATCGCTTCAGGAAAACGGTGAAT 1525
|||||||||||||||||||||| ||| | |||||||||||||||||||||||| ||||||
Sbjct 1549 TGTCCAGTTGAGTGATAGCAAT-GCCCTGATAAAGACATCGCTTCAGGAAAACAGTGAAT 1607
Query 1526 GGAACGAGTGGCAAAGTAGTGTTCTAAAGGAGCGCAATACTGTTGAGAATGTGTACAGAT 1585
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1608 GGAACGAGTGGCAAAGTAGTGTTCTGAAGGAGCGCAATACTGTTGAGAATGTGTACAGAT 1667
Query 1586 GGGCATGCGGGCGTCCAACTACACTGCAAGATAGAACAAGGGATAGCGACGAGGAAGACA 1645
|||||||||||||||| ||||||||||||||||||||||||||||| ||||| |||||||
Sbjct 1668 GGGCATGCGGGCGTCCTACTACACTGCAAGATAGAACAAGGGATAGTGACGAAGAAGACA 1727
Query 1646 GGGATTACGATGTTGCAGCTTTGGCGAACAATTTGAACCAAGCGTTTAATTACAGAATGT 1705
|||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| |
Sbjct 1728 GGGACTACGATGTTGCAGCTTTGGCGAACAATTTGAACCAAGCATTTAATTACAGAATCT 1787
Query 1706 ATGGAAACGAGGATAATGAAGAGGAT 1731
||||||| ||||||||||||||||||
Sbjct 1788 ATGGAAATGAGGATAATGAAGAGGAT 1813
Score = 1011 bits (547), Expect = 0.0
Identities = 657/711 (92%), Gaps = 3/711 (0%)
Strand=Plus/Plus
Query 1729 GATGCATACTTTGACGATGAATCTGCTGAAGTAGTGATTTCATCCTTGAGACTCGGAGAC 1788
||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1850 GATTCATACTTTGACGATGAATCTGCTGAAGTAGTAATTTCATCCTTGAGACTCGGAGAT 1909
Query 1789 GACCAAGGAAGCTTGCTCACAAATTCGGACTGGTTCACATTCCAAGATGACAGATTCAGC 1848
|||||||| || |||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1910 GACCAAGGGAGTTTGCTCACAAATTCCGACTGGTTCACATTCCAAGATGACAGATTCAGC 1969
Query 1849 AACACGGCCTCTGACACGACGATTGAAGACGTGAACATGAATGAAAACTCAAATGATAAC 1908
||| || |||||||||||| ||| || ||||||||||||||||||| | |||||| |||
Sbjct 1970 AACCCGACCTCTGACACGATGATCGAGGACGTGAACATGAATGAAACCACAAATGCTAAT 2029
Query 1909 AATAGCAGCAGCAGTGACGATGAACTTCTGGTTGGAGAAGAAAAAGACGATGATCTAACC 1968
|||||||||||||||| |||||||||||||||| ||||||| ||||||||||||||||
Sbjct 2030 GATAGCAGCAGCAGTGATGATGAACTTCTGGTTGAAGAAGAAGAAGACGATGATCTAACA 2089
Query 1969 GAGAAACCGGAGAACATATCTCCCAGCAATTTATCAACATCAGACTCAACAAGCATCAAT 2028
|||||| || ||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 2090 GAGAAATCGAAGAACATCTCTCCCAGCAATTTATCAACATCAGACTCAACAAGCATCAAC 2149
Query 2029 ACATCATCAGAGAACAACGATGAACCATCTGAAATGCAAATCACTAGCTCCAGTCTGAAC 2088
| |||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||
Sbjct 2150 ATATCATCAGAGAACAACGATGAACCATCTGACATGCAAGTCACTAGCTCCAGTCTGAAC 2209
Query 2089 CCATTCATCGATGTACCAATGCTCGATGTCAAATCCGAACTGGTTATTCCAAACGGTTCC 2148
|||||||| || ||||||||||| ||||||||| |||||| ||||||||||||| |||||
Sbjct 2210 CCATTCATTGACGTACCAATGCTTGATGTCAAACCCGAACCGGTTATTCCAAACAGTTCC 2269
Query 2149 CCACCATCATCTGGAAGCAGCGGCTCAGGGCACAAATCGCCTTCTTCTCCTGCCGTGCGA 2208
||| ||||||||| ||||||| ||| ||||| ||||||||||| |||||||||||||||
Sbjct 2270 CCAACATCATCTGAAAGCAGCAGCTTGGGGCATAAATCGCCTTCGTCTCCTGCCGTGCGA 2329
Query 2209 GCACTCTTTGAAGAGGATGTGGAGTTTGTAGGAGTGGAACCAGAAGGAACAGAGAAAGCA 2268
||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||
Sbjct 2330 GCACTCTTTGAAGAGGATGTGGAGTTTGTGGGAGTAGAACCAGAAGGAACAGAGAAAGCA 2389
Query 2269 ATGGAACAAGCCTTAAAAGAAGGGATAGTCGGTGAAGCTGGACCGTTGAAGCGGAATATC 2328
||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 2390 ATGGATCAAGCTTTAAAAGAAGGGATAGTCGGTGAAGCTGGACCGTTGAAGCGTAATATT 2449
Query 2329 GTTCAAAAAGTTCCGGAAAACGAAAACCACCAGGAAGAGAATTCAGGTGTGACAGAGTTC 2388
||||| ||||||||||||||||||||||| || ||||||||| ||||||||||| |||
Sbjct 2450 GTTCAGAAAGTTCCGGAAAACGAAAACCA---GGCAGAGAATTCGGGTGTGACAGAATTC 2506
Query 2389 AACGATGGAAATTTCTGGAGGGTTGATCAAGAAGTTACAGTTTTGGAGTAA 2439
||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 2507 AACGATGCAAATTTCTGGAGGGTTGATCAAGAAGTTACAGTTTTGGAGTAA 2557
Score = 76.8 bits (41), Expect = 9e-13
Identities = 41/41 (100%), Gaps = 0/41 (0%)
Strand=Plus/Plus
Query 1 ATGTTCTGGAAGCTAGCCTCTCTCTCTGCATCGTCTCCTGT 41
|||||||||||||||||||||||||||||||||||||||||
Sbjct 191 ATGTTCTGGAAGCTAGCCTCTCTCTCTGCATCGTCTCCTGT 231
> AT1G07990.1 | Symbols: | SIT4 phosphatase-associated family
protein | chr1:2477157-2483138 FORWARD LENGTH=2905
Length=2905
Score = 1598 bits (865), Expect = 0.0
Identities = 1557/1881 (83%), Gaps = 87/1881 (5%)
Strand=Plus/Plus
Query 157 ATACTAGACAAAGACAGTTTCACTTTGGAAGAGCTTCTTGATGAGGAAGAGATTATTCAA 216
||| |||||||||| | |||||| ||||||||||||||||||||||||||||||||||||
Sbjct 305 ATATTAGACAAAGAAAATTTCACGTTGGAAGAGCTTCTTGATGAGGAAGAGATTATTCAA 364
Query 217 GAATGCAAAGCTTTGAATAGCCGACTCATAAATTTTCTAAGGGATAAAACTCAAGTGGAC 276
|||||||| |||||||||||| | ||||| || ||||||||||||||| ||||||||||
Sbjct 365 GAATGCAAGGCTTTGAATAGCAGGCTCATTAACTTTCTAAGGGATAAAGCTCAAGTGGAG 424
Query 277 CAACTT-TTGCGGTATGTTGTTGAAGAGCCTG-AGGACGATGCTGATAGCAAACGTGCTT 334
||| || |||||||| |||||||||| ||| | | ||||||||||| ||||||||||
Sbjct 425 CAA-TTATTGCGGTACATTGTTGAAGAACCTCCAC-AGGATGCTGATAGTAAACGTGCTT 482
Query 335 TCAAGTTTCCATTTATCTCTTGTGAGATATTTACATGTGAGATTGATGTTATTCTTAAGA 394
||||||||||||| ||||||||||| |||||||||||||| |||||||||||||| || |
Sbjct 483 TCAAGTTTCCATTCATCTCTTGTGAAATATTTACATGTGAAATTGATGTTATTCTAAAAA 542
Query 395 CTTTGGTGGAGGATGA-GAAGCTGATGGATTTGCTGTTTGGATTTTTGGAACCGAATCGT 453
||||||| |||||||| || ||||||| | ||||| ||| ||| ||||||| ||||||
Sbjct 543 CTTTGGTCGAGGATGAAGA-GCTGATGAACTTGCTTTTTTCCTTTCTGGAACCAAATCGT 601
Query 454 CCTCATAGTGCGTTGCTGGCAGGCTATTTCGGAAAGGTTGTCATATGT-TTGATGATCAG 512
||||||||||| |||||||||||||||||| | ||||||||||| || || ||||||||
Sbjct 602 CCTCATAGTGCATTGCTGGCAGGCTATTTCAGCAAGGTTGTCATTTGCCTT-ATGATCAG 660
Query 513 AAAGACTGCAGCACTTATGAAATATATAAAAGGGCATGGAAATGTGTT-TAGCCAGTTGG 571
||| |||||||| |||||||| ||| ||||||||||| |||||| || | ||||||| |
Sbjct 661 AAAAACTGCAGCGCTTATGAATTATGTAAAAGGGCATCAAAATGTTTTCT-GCCAGTTAG 719
Query 572 TTGATTTAATTGGAATAACATCCATCATGGAGGTTTTAGTTCGCTTGGTTGGGGCTGATG 631
||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 720 TTGATTTGATTGGGATAACATCCATCATGGAGGTTTTGGTTCGCTTGGTTGGGGCTGATG 779
Query 632 ATCATGTCTATCCCAATTTTCCGGATGTGATGCGATACTTGGCTGATAGTGATTTACTTG 691
| || ||||||||||| |||| ||||||||||| || ||||||||||| |||||||||
Sbjct 780 ACCAAGTCTATCCCAACTTTCTGGATGTGATGCAATGGTTGGCTGATAGCAATTTACTTG 839
Query 692 AAATGATCGTGGACAAACT-AAACTCATCTAGTCCTCCTGAGGTTCAGGCAAACGCAGCA 750
||||||||||||||||||| |||| ||||||||||||| |||||||||||||| ||||||
Sbjct 840 AAATGATCGTGGACAAACTTAAAC-CATCTAGTCCTCCGGAGGTTCAGGCAAATGCAGCA 898
Query 751 GAAACATTATGTGCAATTACTCGAAATGCACCTTCAGCTCTAGCTACAAAACTCTCTAGC 810
|||||||||||||||||| |||| |||||||| |||||| ||||||| | |||||||||
Sbjct 899 GAAACATTATGTGCAATTTCTCGGAATGCACCGTCAGCTTTAGCTACGCAGCTCTCTAGC 958
Query 811 CCTGGCTTCGTTTCTAGGATATTTGGTCATGCTATAGAAGATTCACATTCAAAATCTGGC 870
||||||| |||| | | |||||||||||||||| | ||||| || ||||||||||| ||
Sbjct 959 CCTGGCTACGTTGCAAAGATATTTGGTCATGCTCTTGAAGACTCGCATTCAAAATCCGGT 1018
Query 871 CTAGTTCATTCACTTACTGTATGTATCTCTCTGT-TAGATCCAAGGAGATCTGCTGTTTC 929
||||||||||||||| | ||||| | |||||| | | ||||| |||||||||||||||||
Sbjct 1019 CTAGTTCATTCACTTTCAGTATGCACCTCTCT-TCTGGATCCGAGGAGATCTGCTGTTTC 1077
Query 930 ATCGCCTTTCTTCAATTCTTTTAGAGGTCAACATATGTTTGAGTCTCCTGTCCCAGTGAG 989
||| || | |||||||||| ||||||||||||||||| |||||||||||||||||
Sbjct 1078 ATCTTCTATGTTCAATTCTTACAGAGGTCAACATATGTTCGAGTCTCCTGTCCCAGTTTC 1137
Query 990 CC-AGGAGACTATTGGTGCCATGCTACCAAAACTCGGTGACATGCTTGTGCTGCTCAGTG 1048
|| || | ||||||||||||||||| || |||||| |||| ||||| |||| |||| ||
Sbjct 1138 CCCAGAA-ACTATTGGTGCCATGCTGCCCAAACTCAATGACTTGCTTATGCTTCTCACTG 1196
Query 1049 TAGCGTCTGACAGCAAAGTCTTACCTACAACGTATGGAGAGCTGAGGCCGCCTCTTGGAA 1108
|||| ||||| |||| ||| || |||||||| ||||| || |||||||| ||||| ||||
Sbjct 1197 TAGCATCTGATAGCACAGTATTGCCTACAACATATGGTGAACTGAGGCCTCCTCTCGGAA 1256
Query 1109 AGCATCG-CTTGAAGATTGTAGAATTTATTGCGGTGCTGTT-AAAATCTGGAAATGAAGC 1166
||||||| || |||||||| || || ||||| || |||| |||| || ||| ||||||
Sbjct 1257 AGCATCGTCTA-AAGATTGTGGAGTTCATTGCAGTTTTGTTGAAAA-CTAGAAGTGAAGC 1314
Query 1167 TGCTGGAACTGAATTAG-CAAGCTCTGGAACAATTAAAAGGATCCTTGAACTATTTTTCG 1225
||| || ||||||| || | || |||||||| ||||||| |||||| || |||||||
Sbjct 1315 TGCACAAAAGGAATTAGTCA-GTTCAGGAACAATCAAAAGGACCCTTGATCTGTTTTTCG 1373
Query 1226 AGTACCCATACAATAATGCTCTCCATCACCAAGTGGAGAGTATAATACTTTCTTGTTTGG 1285
||||||| |||||||||||||| ||||| |||||||||||||||||||||||||||||||
Sbjct 1374 AGTACCCGTACAATAATGCTCTGCATCATCAAGTGGAGAGTATAATACTTTCTTGTTTGG 1433
Query 1286 AAAATAAGAGCGAAATT-ATGGTTAACCATATCCTTCAAGAATGCAATCTGATTAGCAAA 1344
|||| |||||||| || |||||||||||||| |||| ||| ||| |||||||| |||||
Sbjct 1434 AAAACAAGAGCGAT-TTGATGGTTAACCATATTCTTCGAGACTGCGATCTGATTGGCAAA 1492
Query 1345 ATTC-T-TTCATCAGACAAGGACTCGGTTCT-TTCTGGCGATAACTTGCCTACCGTAGTT 1401
||| | || || |||| |||||| || || || |||| | ||| || |||| |
Sbjct 1493 -TTCCTCTTG-TCGGACAGGGACTCAAACCTCTTA-GGTGATAGCCAGCCCACTGTAGCT 1549
Query 1402 GCCACTGGGAAAAAACCACCGCGGGTTGGATATGTTGGACATATCACAAGACTATGGAAT 1461
||| | ||||||||| ||| || || || ||||| || |||||||||||| ||| |||
Sbjct 1550 GCCTCCGGGAAAAAAAAACCTCGTGTCGGGTATGTCGGGCATATCACAAGAATATCAAAT 1609
Query 1462 AAACTTG-TCCAGTTGAGTGATAGCAATAGCCTCATAAAGACAT-CGCTTCAGGAAAACG 1519
||| ||| || |||||||| | |||||| ||| |||||| ||| | ||||||||||||
Sbjct 1610 AAAATTGGTC-AGTTGAGTAACAGCAATGGCCAGATAAAGGCATAC-CTTCAGGAAAACA 1667
Query 1520 GTGAATGGAACGAGTGGCAAAGTAGTGTTCTAAAGGAGCGCAATACTGTTGAGAATGTGT 1579
| |||||||| ||||||||| |||||||||| |||| ||||| || ||||| |||||
Sbjct 1668 GCGAATGGAATGAGTGGCAAGGTAGTGTTCTGCAGGACCGCAACACGGTTGAAAATGTCA 1727
Query 1580 ACAGATGGGCATGCGGGCGTCCAACTACACTGCAAGATAGAACAAGGGATAGCGACGAGG 1639
||||||||| ||| ||||| |||||||| || |||||||| ||||| |||||||| ||||
Sbjct 1728 ACAGATGGGGATGTGGGCGCCCAACTACCCTACAAGATAGGACAAGAGATAGCGATGAGG 1787
Query 1640 AAGACAGGGATTACGATGTTGCAGCTTTGGCGAACAATTTGAA-CCAAGCGTTTA-ATTA 1697
|||||||||||||||||||||||||| |||| || || || || |||||| |||| || |
Sbjct 1788 AAGACAGGGATTACGATGTTGCAGCTCTGGCCAATAACTT-AAGCCAAGCATTTAGAT-A 1845
Query 1698 CAGAATGTATGGAAACGAGGATAATGAAGAGGATG-CA-TAC--TT--T-GA--CGATGA 1748
|| ||| ||||||||||| || ||||||||||| || | | || | || ||||||
Sbjct 1846 CAAAATATATGGAAACGATGACAATGAAGAGGACCACAATGCCCTTGATAGAGACGATGA 1905
Query 1749 --AT-----CT--G-C--TGAA---G-T-A-GT-G-A-TTTCATCCTTGAGACTCGGAGA 1787
|| || | | |||| | | | || | | |||||||||| ||||| || ||
Sbjct 1906 TGATGTTTACTTCGACGATGAATCTGCTGAAGTAGTAATTTCATCCTTAAGACTTGGGGA 1965
Query 1788 CGACCAAGGAAGCTTGCTCACAAATTCGGACTGGTTCACATTCCAAGATGACAGATTCAG 1847
||||||||||||||| | ||||||||| | ||||||||||||||||| || |||||| |
Sbjct 1966 TGACCAAGGAAGCTTGTTTACAAATTCGAATTGGTTCACATTCCAAGACGATAGATTCGG 2025
Query 1848 CAACACGGCCTCTGACAC-GACGA-TT-GAAGACG-T-GAACATG-AAT-GAA-AACTCA 1899
|| ||| |||||||||| | || || ||| ||| | || | || ||| ||| || |
Sbjct 2026 CAGCACACCCTCTGACACAG-CGGGTTCGAACACGATAGA-CGTGGAATTGAATAAAACC 2083
Query 1900 AATGATAACAATAGC-AGCAGCAGTGACGATGA--AC-TTCTGGTTGGAGAAGAAAAAGA 1955
|| || ||| | | ||||| ||||||||||| | || |||||||||||||| ||
Sbjct 2084 TATAATGCCAACA-CTAGCAGTAGTGACGATGATGAAGTTGTGGTTGGAGAAGAA---GA 2139
Query 1956 CGATGATCTAACCGAGAAACC 1976
|||||||||||| | ||||||
Sbjct 2140 CGATGATCTAACTG-GAAACC 2159
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 121133915085
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5