BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg481710
Length=3327
Score E
Sequences producing significant alignments: (Bits) Value
AT2G27980.1 | Symbols: | Acyl-CoA N-acyltransferase with RING/... 2625 0.0
> AT2G27980.1 | Symbols: | Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type
zinc finger domain | chr2:11913629-11919741
REVERSE LENGTH=3540
Length=3540
Score = 2625 bits (1421), Expect = 0.0
Identities = 1704/1838 (93%), Gaps = 29/1838 (2%)
Strand=Plus/Plus
Query 33 GGTTCGTACTGGGTGTAAAAGAGAGTTGCAATTTGTTTTGAAATCTCAGTCTGAGATCTG 92
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 45 GGTTCGTACTGGGTGTAAAAGAGAATTGCAATTTGTTTTGAAATCTCAGTCTGAGATCTG 104
Query 93 TGGTGGTGAGTCATTAGGTCGGACTCGTGGAAGCAGGAACTTGAATGGTGAGTCTAGAAG 152
|||||||||||| |||||||||||| | ||||| || |||||||||||||||||||||||
Sbjct 105 TGGTGGTGAGTCTTTAGGTCGGACTAGGGGAAGTAGAAACTTGAATGGTGAGTCTAGAAG 164
Query 153 TGTGGAGGTTAAGAAATCGATTCGTGGGTCTGGTTTGAAA-AGTGGGATTAAGAAGATGC 211
|||||||||||||||||||||||| | ||||||||| ||| |||||||||||||||||||
Sbjct 165 TGTGGAGGTTAAGAAATCGATTCGCGCGTCTGGTTT-AAAGAGTGGGATTAAGAAGATGC 223
Query 212 GTTTTAGTAAAGATGAGGAA----GT----TT-TAATGTCTGATACTGTTGGTGTTGGTT 262
|||||||||||||||||||| || || |||||||||||||||||||||||||||
Sbjct 224 GTTTTAGTAAAGATGAGGAAGTTGGTGAAGTTGTAATGTCTGATACTGTTGGTGTTGGTT 283
Query 263 TGGAGGAAGATGAAGGTAAGAGTGATGTTGTTGATGTTGA-AGAGACAAAGGGTT--TTG 319
|||||||||| |||| ||||||||||||| |||||||||| | | |||| |
Sbjct 284 TGGAGGAAGAAGAAGTTAAGAGTGATGTTATTGATGTTGACTCTG-C-TTTGGTTGAATC 341
Query 320 T-TAAG-GACG---AGGGACAAG-A-AG-AGAATG-TG--GAGATTGGGAATGGGGATGA 368
| | || || | | |||| || | || |||||| || ||||||| ||||||||||||
Sbjct 342 TATGAGTGAAGATAAAGGACTAGAAGAGAAGAATGATGTTGAGATTGAGAATGGGGATGA 401
Query 369 TAATGTGGTGATGAATGAGGATCATTTACTGGAGCAACCTGAGAAGGGTTCACTGAAAGT 428
|||||||||||||||||||||||| ||||| |||||| ||||||||| |||| ||| ||
Sbjct 402 TAATGTGGTGATGAATGAGGATCACTTACTTGAGCAAACTGAGAAGGTTTCAGAGAAGGT 461
Query 429 TACAGAGGCTGAGAAGGTATGTGCGATTGGGGGAGACAGTGTGATTGACAGAGAGATAGT 488
|| ||||||||||||||||||| ||||||| ||||||||||| ||||| ||||| |||||
Sbjct 462 TATAGAGGCTGAGAAGGTATGTTCGATTGGAGGAGACAGTGTTATTGATAGAGAAATAGT 521
Query 489 TGTGGCATGTCCTGCAGGTCTTAGTGTGTTGGAGAAAATGGCTTCTAGATCTTGCAAGGT 548
|||||||||||||||||||||||||||| |||| |||||||||||||||||||| |||||
Sbjct 522 TGTGGCATGTCCTGCAGGTCTTAGTGTGATGGAAAAAATGGCTTCTAGATCTTGTAAGGT 581
Query 549 TAAGTTGGAAAGAGGTTTGGTTTATGCGAAACCCTGTAAAAGGTTGACACGGTCGATGTT 608
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
Sbjct 582 TAAGTTGGAAAGAGGTTTGGTCTATGCGAAACCCTGTAAAAGGTTGACACGGTCGATGCT 641
Query 609 GAAGGTTGAGGGTATTAAGTCTGAGGTTAATGTTGATGAAGATCATGTAAATCCAGAAAA 668
||||||||||||||| |||||||||||||||| |||||| ||||||||||||||||||||
Sbjct 642 GAAGGTTGAGGGTATCAAGTCTGAGGTTAATGCTGATGATGATCATGTAAATCCAGAAAA 701
Query 669 GGATGCTATAGATAGTGAAGATAATTGTGTTGGTGTTTCTAGTTCAGTGGCATGTGAGAT 728
||||||||||| |||||||||||||||||||| ||||||| |||||||||||| || | |
Sbjct 702 GGATGCTATAGGTAGTGAAGATAATTGTGTTGATGTTTCTGGTTCAGTGGCATATGTGGT 761
Query 729 GGAGGAGGAGCTTCATGAGCAAAATAATGTGGAGATATGCCTCGGGCTTCCAAGTAGATC 788
|||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 762 GGAGGAGGAGCTTCTTGAGCAAAATAATGTGGAGATATGCCTTGGGCTTCCAAGTAGATC 821
Query 789 ATCCCAGATGAGTGGTCATTCTCTATGCCTTGGGCTTCCAAGTAGATCATTCCAGATGAG 848
||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 822 ATCCCAGATGAATGGTCATTCTCTATGCCTCGGGCTTCCAAGTAGATCATTCCAGATGAG 881
Query 849 TGGTCTTTCTCAACGTGTTGATAAGAAGGCAGTGAATGATATAGTAGCTAAGCCGTTGAG 908
||||| ||||||| ||||||||||||||||||||||||||| ||||| |||||| |||||
Sbjct 882 TGGTCATTCTCAAGGTGTTGATAAGAAGGCAGTGAATGATACAGTAGATAAGCCATTGAG 941
Query 909 GAGGTTTACTAGGTCATTGGTCAAACAAGAAAGTGATTCAGACAATCTTAATTTGGGAAA 968
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 942 GAGGTTTACTAGGTCATTGGTCAAACAAGAAAGTGATTCAGACAATCCTAATTTGGGAAA 1001
Query 969 TAATACTGAACCAGCAGACTTGGGCGAGGTAGATATGCATGCCAATGATGTTGAAATGGA 1028
|| ||| |||||||||||||||| ||| ||||||||||||||||||||||||||||||||
Sbjct 1002 TACTACCGAACCAGCAGACTTGGTCGATGTAGATATGCATGCCAATGATGTTGAAATGGA 1061
Query 1029 TGATTTTCAAAGTCCTTCAGTTACTACTCACAACAGGCGTGGTAGGCCCAAGAAATTTCT 1088
|| |||||||||||||||||||||||||| ||||| |||||| || ||||||||||||||
Sbjct 1062 TGGTTTTCAAAGTCCTTCAGTTACTACTCCCAACAAGCGTGGCAGACCCAAGAAATTTCT 1121
Query 1089 AAGGAATTTCCCAGCAAAGCTGAAAGAAATTCTTAATTGTGGAATACTTGAGGGACTAAC 1148
||||||||||||||||||||||||||| ||| || ||||||||||||||||||||||||
Sbjct 1122 AAGGAATTTCCCAGCAAAGCTGAAAGATATTTTTGATTGTGGAATACTTGAGGGACTAAT 1181
Query 1149 TGTGTACTATCTTCGAGGAGCAAAGGTGAGAGAGGCGGGGACTAGAGGGCTTAAAGGAGT 1208
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1182 TGTGTACTATGTTCGAGGAGCAAAGGTGAGAGAGGCGGGGACTAGAGGGCTTAAAGGAGT 1241
Query 1209 GATAAAGGGATCAGGCGTTTTGTGCTTTTGTTGTGCCTGCAAAGGAATGCAAGTGGTGAG 1268
|||||| |||||||||||||||||||||||| ||||||||| |||||| || ||||||||
Sbjct 1242 GATAAAAGGATCAGGCGTTTTGTGCTTTTGTAGTGCCTGCATAGGAATACAGGTGGTGAG 1301
Query 1269 CACTGCCATGTACGAGGTGCATGCTTCTAGCGCA-AACAAGCGCCCTCCTGAATATATCT 1327
| ||||||||| |||| |||||||||||||| | ||||| ||||| |||||||||||||
Sbjct 1302 CCCTGCCATGTTCGAGTTGCATGCTTCTAGC-AATAACAAACGCCCACCTGAATATATCT 1360
Query 1328 TACTGGAGTCTGGATTCACACTTCGTGATGTCATGAATGCATGCAAGGAAACTCCCTTGG 1387
||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||
Sbjct 1361 TACTGGAGTCTGGATTCACACTTCGTGATGTCATGAATGCATGCAAGGAAAATCCTTTGG 1420
Query 1388 CTACACTAGAAGAAAAACTTCGTGTGGTAGTTGGACCAAATTTAAAGAAATCTAGCCTGT 1447
||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1421 CTACACTAGAAGAGAAACTTCGTGTGGTAGTTGGACCAATTTTAAAGAAATCTAGCCTGT 1480
Query 1448 GTTTGAATTGCCAAGGTCCAATGATTGAACCTTGTGATACAAAATCATTAGTTGTGTGCA 1507
|||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1481 GTTTGAGTTGCCAAGGTCCAATGATTGAGCCTTGTGATACAAAATCATTAGTTGTGTGCA 1540
Query 1508 AATCATGTTTGGAGAGTAAGGAGCCAGAATTCCACAACAGTCCTTCTAAAGGAAATGGTG 1567
|||| ||||||||||||||||||||||||||||| |||||||| ||||||| ||||| ||
Sbjct 1541 AATCGTGTTTGGAGAGTAAGGAGCCAGAATTCCATAACAGTCCGTCTAAAGCAAATGATG 1600
Query 1568 CTCTTAACGGTTCGTCTAGGCCAAGTGTGGATCCAAAATCTATCCTTAGTAGGTCAAAAT 1627
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1601 CTCTTAACGGTTCGTCTAGGCCAAGTGTGGATCCAAAATCTATCCTTAGAAGGTCAAAAT 1660
Query 1628 CCAGTCCTCGCCAAAGTATCAGGCGAGAACAACCAACCAGAAAGTCAACTGAGCCAGGCG 1687
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct 1661 CCAGTCCTCGCCAAAGTAACAGGCGAGAACAACCAACCAGAAAGTCAACTGAGCCAGGTG 1720
Query 1688 TGGTTCCAGGAACTATTCTGAGCGAGTCAAAATCCAGCTCAATCAAAAGCAACAGCCAAG 1747
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
Sbjct 1721 TGGTTCCAGGAACTATTCTGAGCGAGTCAAAAAACAGCTCAATCAAAAGCAACAGCCATG 1780
Query 1748 GGAAACTAACCAGAAAGGATGTGCGGCTGCACAAACTTGTTTTTGAGGATGATATACTGC 1807
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1781 GGAAACTAACCAGAAAGGATTTGCGGCTGCACAAACTTGTTTTTGAGGATGATATACTGC 1840
Query 1808 CAGATGGGACTGAAGTGGGTTATTTCGTTGCTGGAGAG 1845
|||||||||||||||| |||||||||||||||||||||
Sbjct 1841 CAGATGGGACTGAAGTAGGTTATTTCGTTGCTGGAGAG 1878
Score = 1886 bits (1021), Expect = 0.0
Identities = 1175/1249 (94%), Gaps = 11/1249 (1%)
Strand=Plus/Plus
Query 2020 GTATGTGCTTCTCTATCAAGCCTTCCGAGTGAGAGGTGGTCCTGCAAATATTGTGTGAAT 2079
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2158 GTATGTGCTTCTCTACCAAGCCTTCCGAGTGAGAGGTGGTCCTGCAAATATTGTGTGAAT 2217
Query 2080 ATGGTTGAGAGAGAGAAGTTCGTGGATAGCAATCTCAACGCCATTGCAGCTGGGAGAGTT 2139
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2218 ATGGTTGAGAGAGAGAAGTTCGTGGATAGCAATCTCAACGCCATTGCAGCTGGGAGAGTT 2277
Query 2140 CAGGGAGTTGATGCAATTGCTGAGATAACCAATAGATGTATTCGAGTTGTCAGCTCCTTT 2199
|||||||||||||||||||||||||||||||||||||| |||||| |||||||||| |||
Sbjct 2278 CAGGGAGTTGATGCAATTGCTGAGATAACCAATAGATGCATTCGAATTGTCAGCTCTTTT 2337
Query 2200 GGGACCGAGCTCCCAAGTGTATGCGTGTTATGCAGAGGTCATAGTTTTTGCAGGTTGGGC 2259
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2338 GTGACCGAGCTCCCAAGTGTATGCGTGTTATGCAGAGGTCATAGTTTTTGCAGGTTGGGC 2397
Query 2260 TTTAATTCTCGCACTGTGATTATCTGTGATCAGTGTGAAAAGGAATTCCATGTTGGCTGT 2319
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2398 TTTAATGCTCGCACTGTGATTATCTGTGATCAGTGTGAAAAGGAATTCCATGTTGGCTGT 2457
Query 2320 TTGAAGGAACATAACATTGCTGATCTCAAGGAGCTACCTGAAGAAAAATGGTTCTGTTCT 2379
||||| |||| | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2458 TTGAAAGAACGTGACATTGCTGATCTCAAGGAGCTACCTGAAGAAAAATGGTTCTGTTCC 2517
Query 2380 GTCGACTGTGAAAAGATCAACACTACATTGGGCAATCTGATAGTTCGCGGAGAAGAGAAG 2439
||| || ||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2518 CTCGGGTGCGAAGAGATCAACACTACATTGGGCAATCTGATAGTTCGCGGAGAAGAGAAG 2577
Query 2440 CTTAGTAACAACATTCTGAATTTTATAAGGAAGAAGGAACAACCTAATGAAGAAAGCTGT 2499
|| |||||||| |||||||||||| |||||||||||||||||||||||||||||| ||||
Sbjct 2578 CTAAGTAACAATATTCTGAATTTTTTAAGGAAGAAGGAACAACCTAATGAAGAAAACTGT 2637
Query 2500 CCAGATGACAACACCACCCCCGACATAAGATGGAGGGTCCTTAGTGGGAAGTTGACCTCT 2559
|||||| | || ||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct 2638 CCAGATTATAAAACCACTCCTGACATAAGATGGAGGGTCCTTAGTGGGAAGTTGACCTCT 2697
Query 2560 TCGGATGAAACAAAAATATTGCTTGCAAAGGCAGTTTCCATTCTTCATGAGCGGTTTGAT 2619
|| ||||| || ||||||||||||||||||||| |||||||||||||||| |||||||||
Sbjct 2698 TCAGATGATACCAAAATATTGCTTGCAAAGGCACTTTCCATTCTTCATGAACGGTTTGAT 2757
Query 2620 CCTATCAGTGAAACTGGGACCAGGGGAGATTTGATACCTGCCATGGTGTACGGAAGGCAA 2679
|||||||||||| ||||||||| ||||||||||||||| ||||||||||| |||||||||
Sbjct 2758 CCTATCAGTGAATCTGGGACCAAGGGAGATTTGATACCAGCCATGGTGTATGGAAGGCAA 2817
Query 2680 ACAAAGGGCCAAGATTTTAGTGGCATGTACTGCACCATGTTGGCTGTGGATGAAGTGATA 2739
||||||| ||||||||||||||||||||||||||| |||||||||||||| ||||||||
Sbjct 2818 ACAAAGGCCCAAGATTTTAGTGGCATGTACTGCACTATGTTGGCTGTGGACGAAGTGATT 2877
Query 2740 GTTTCAGTGGGAATCTTTAGGGTTTTCGGGTCAGAACTTGCAGAACTCCCTCTGGTTGCT 2799
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 2878 GTTTCAGTGGGAATCTTTAGGGTTTTTGGGTCAGAACTTGCAGAACTCCCTCTGGTTGCT 2937
Query 2800 ACCAGCAAAGATTGTCAAGGGCAGGGTTACTTCCAATGCCTGTTTGCTTGCATCGAGAGG 2859
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2938 ACCAGCAAAGATTGTCAAGGGCAGGGTTACTTCCAATGCCTGTTTGCTTGCATCGAGAGG 2997
Query 2860 CTACTTGGGTTCCTAAACGTAAAACATATCGTGCTACCAGCAGCAGATGAAGCCAAATCC 2919
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 2998 CTACTTGGGTTCCTAAACGTGAAACATATCGTGCTACCAGCAGCAGATGAAGCCAAATCC 3057
Query 2920 ATTTGGACTGACAAATTTGGTTTCACCAAGATGACCGACGAGGAGGTGAAAGAATACAGA 2979
|| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 3058 ATATGGACTGACAAATTTGGTTTCACCAAGATGACCGACGAAGAGGTGAAAGAATACAGA 3117
Query 2980 AAAGACTACTCAGTGATGATCTTTCATGGAACATCTATGTTGAGAAAGAGCGTGCCTGCA 3039
||||||||||| |||||||||||||||||||||||||||||||||||||| || || |||
Sbjct 3118 AAAGACTACTCGGTGATGATCTTTCATGGAACATCTATGTTGAGAAAGAGTGTACCAGCA 3177
Query 3040 CCGAGTGCCCCAAGTAAAACTGAGGGCAGTAAGGAGGAGTAAGCTCAAGGCCGTCTTTAT 3099
||||||||| ||||||||||||| |||||||||||||||||||||||| |||||| |
Sbjct 3178 CCGAGTGCCGTGAGTAAAACTGAGGCCAGTAAGGAGGAGTAAGCTCAAGGTTGTCTTTGT 3237
Query 3100 TTTTTGGTT-----A--GTCGATGAAACGATTGGATGCTCTTTTTTAATCTAATTCCGGG 3152
||||||||| | || | ||||||||||||||||||||||||||||||||| ||||
Sbjct 3238 TTTTTGGTTTTTGGAAAGTTGGTGAAACGATTGGATGCTCTTTTTTAATCTAATTTCGGG 3297
Query 3153 TAGTAGCCACGTTCGTGTACAGGTTTTTCCCCTAATGTGTCTCTCTTTATAACGGAAAG- 3211
|||||||||||||| ||||||||||| |||||||| |||||| ||||| ||| |||||
Sbjct 3298 TAGTAGCCACGTTCTTGTACAGGTTTCTCCCCTAACGTGTCTTTCTTTGTAATGGAAACT 3357
Query 3212 AGAGTGGAAA-ATACACAAAAGGGT-AGAGAATTTGGTTTTGGTAGAGA 3258
|||| | ||| |||||||||||||| |||||||||||||||||||||||
Sbjct 3358 AGAGAG-AAAGATACACAAAAGGGTTAGAGAATTTGGTTTTGGTAGAGA 3405
Score = 287 bits (155), Expect = 5e-76
Identities = 169/176 (96%), Gaps = 0/176 (0%)
Strand=Plus/Plus
Query 1845 GGTCAGTCCTTCATCGTTTGAGGCCCATGCTGGCTGTGCAAGTCGTCGGAAGCCGTTTCA 1904
||||||||||||| ||||||||||||| ||||| ||||||||||| ||||||||||||||
Sbjct 1938 GGTCAGTCCTTCAACGTTTGAGGCCCACGCTGGATGTGCAAGTCGCCGGAAGCCGTTTCA 1997
Query 1905 GCACATTTATACAACCAATGGGGTTTCTCTTCATGAGCTATCAGTAGCACTATCAATGGA 1964
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1998 GCACATTTATACAACCAATGGGGTTTCTCTTCATGAACTATCAGTAGCACTATCAATGGA 2057
Query 1965 CCAGAGGTTTTCCATCCATGAAAATGATGATCTTTGCAGTATTTGTAGGGATGGGG 2020
|||||||||||||||||||||||||||||| ||||||||||| |||||||||||||
Sbjct 2058 CCAGAGGTTTTCCATCCATGAAAATGATGACCTTTGCAGTATATGTAGGGATGGGG 2113
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 165550911900
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5