BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg481716
Length=3705
Score E
Sequences producing significant alignments: (Bits) Value
AT2G27900.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein o... 5830 0.0
AT2G27920.1 | Symbols: SCPL51 | serine carboxypeptidase-like 51... 200 8e-50
> AT2G27900.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein
of unknown function DUF2451, C-terminal (InterPro:IPR019514),
Vacuolar protein sorting-associated protein 54 (InterPro:IPR019515);
Has 316 Blast hits to 252 proteins in 92 species:
Archae - 0; Bacteria - 2; Metazoa - 200; Fungi - 2; Plants
- 68; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink).
| chr2:11877430-11885491 FORWARD LENGTH=3852
Length=3852
Score = 5830 bits (3157), Expect = 0.0
Identities = 3456/3598 (96%), Gaps = 30/3598 (1%)
Strand=Plus/Plus
Query 4 CACACCATTGTCGAAACAAATCAAAAGACTCAACAAAAGTC-TC--CTTCTTCTAGA--T 58
||||||||||||||||||||||||||| ||||||||||||| || ||||||||||| |
Sbjct 45 CACACCATTGTCGAAACAAATCAAAAGGCTCAACAAAAGTCTTCTTCTTCTTCTAGATCT 104
Query 59 CTCTTCCCGATCCGATTTGTGACTCGCCGG--A-AAATAA-A-AAACACAGACATTTTCT 113
|||||||||||||||||||||||||||||| | |||||| | | | |||||||||||||
Sbjct 105 CTCTTCCCGATCCGATTTGTGACTCGCCGGAAAGAAATAACACACAGACAGACATTTTCT 164
Query 114 CCGATCGTGAAATTGGATGGATCAATTATTGATCTTACTGGTATAAAGAAGAGATGAGAG 173
|||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 165 CCGATCGTGAAATTAGATGGATCAATAATTGATCTTACTGGTATAAAGAAGAGATGAGAG 224
Query 174 ATGCAGCC-AA-ATC-TCTTCCCATTCGGTTCAGTTTTGGGTAATCCATTTCTCTTCAAT 230
|||||||| || || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 225 ATGCAGCCTAATCTCTTCTTCCCATTCGGTTCAGTTTTGGGTAATCCATTTCTCTTCAAT 284
Query 231 GGCGGTGGAGATCTAAACGAACTTGGTTCTGGTGCTGGATTCGAAAGCTCTAGGGTTTTC 290
||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||
Sbjct 285 GGCGGTGGAGATCTAAACGAACTTGGTTCTGGTGCTGCTTTCGAGAGCTCTAGGGTTTTC 344
Query 291 TTCTTACTTCCTTTCTTATTATCCCAAGGCACTGGTGTCATGGATTTATCTAAAGTTGGT 350
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 345 TTCTTACTTCCTTTCTTATTATCCCAAGGCACTGGTGTCATGGATTTATCTAAAGTTGGT 404
Query 351 GAAAAATTCCTCAGCTCTGTAAAATCCGCTACTTCTCTTGGTCTCTTACCTTCACCTTCT 410
|||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||
Sbjct 405 GAAAAATTCCTCAGCTCTGTTAAATCCGCTACTTCTCTTGGTCTCTTACCTTCTCCTTCT 464
Query 411 ATCTCTGATCGTCCTGAGATTCCGGCACGTGCTGCGGCAGCTGCTGCGGTTGCTCGTGCT 470
||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 465 ATCTCCGATCGTCCTGAGATTCCAGCACGTGCTGCGGCAGCTGCTGCGGTTGCTCGTGCT 524
Query 471 TTGGCGGGACTTCCTTCTGATCAGAGGTTGAGTATATCTTCTACTGCTACTGAGCTTAAC 530
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 525 TTGGCGGGACTTCCTTCTGATCAGAGATTGAGTATATCTTCTACTGCTACTGAGCTTAAC 584
Query 531 TCAATTTATGGAAATAGACCTCTTCCTCAACAAGTTGAAGAGCTTGAAGAGGGATTT-TA 589
|||||||||||||| ||||||||||||||||||||||||||||||||||| || ||| ||
Sbjct 585 TCAATTTATGGAAACAGACCTCTTCCTCAACAAGTTGAAGAGCTTGAAGAAGG-TTTCTA 643
Query 590 TGAAGAGGATTTTGATCCGGTAAGGCATATTTTGGAGAATGTGCCGGAAGATGAAAGTGA 649
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 644 TGAAGAGGATTTTGATCCGGTAAGGCATATTTTGGAGAATGTGCCGGATGATGAAAGTGA 703
Query 650 GTTAGCTTATTTTGAGAAGCAGGCTACCTTGAGGTTGGTACAGCTGGATAGAGTGGCGGA 709
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||
Sbjct 704 GTTAGCTTATTTTGAGAAGCAGGCTACCTTGAGGTTGGTACAGCTGGATAAAGTGGCAGA 763
Query 710 AAATCTGTCACACCATGTTATGGAGCATCATGAAGTAATGGTGAAGGGGATGAATTTGGT 769
|| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 764 AACTCTGTCTCACCATGTTATGGAGCATCATGAAGTAATGGTGAAGGGGATGAATTTGGT 823
Query 770 AAGAGAATTGGAAAAAGATTTGAAGATTGCAAATGTCATCTGCAAGAATGGAAGACGAAA 829
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 824 AAGAGAATTGGAGAAAGATTTGAAGATTGCAAATGTCATCTGCAAGAATGGAAGACGAAA 883
Query 830 TTTGACCTCTTCTATGAATGAGGCTTCAAGAGATCTTATTGTACACACTCATTCCAAAAA 889
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 884 TTTGACTTCTTCTATGAATGAGGCTTCAAGAGATCTTATTGTACACACTCATTCCAAAAA 943
Query 890 GAAACAAGCTCTTCTGGATATGCTTCCTATACTAACTGACCTCCGCCATGCAAGAGTAAT 949
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 944 GAAACAAGCTCTTCTGGATATGCTTCCTATACTAACTGACCTCCGCCATGCAAGAGTAAT 1003
Query 950 GCAGTCAACTCTTGAAGACCTTGTTGAAGAAGGAAACTATTGCAAGGCATTTCAAGTTCT 1009
|||||||| ||||||||||||||||||||| |||||||||||||||||||||||||| ||
Sbjct 1004 GCAGTCAAATCTTGAAGACCTTGTTGAAGATGGAAACTATTGCAAGGCATTTCAAGTCCT 1063
Query 1010 ATCTGAGTATTTGCAGCTGCTTGACAGTCTATCTGAGTTCTCAGCAGCCCAAGAGATGAC 1069
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1064 ATCAGAGTATTTGCAGCTGCTTGACAGTCTATCTGAGTTCTCAGCAGCCCAAGAGATGAC 1123
Query 1070 CCGTGGTGTTGAGGTTTGGTTAGGAAGAACTCTTCATAAGCTGGATTCACTTTTGTTGGG 1129
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1124 CCGTGGTGTTGAGGTTTGGTTAGGAAGAACTCTTCATAAGCTGGATTCACTGTTGTTGGG 1183
Query 1130 CGTTTGCCAGGAATTCAAAGAAGATAGTTATGTAATGGTCCTCGACGCTTATGCACTGAT 1189
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1184 CGTTTGCCAGGAATTCAAAGAAGATAGTTATGTAATGGTCCTCGACGCTTATGCACTGAT 1243
Query 1190 CGGTGATGTCTCTGGTCTCGCAGAAAAGATACAAAGCTTCTTTATGCAGGAAGTTATCTC 1249
|||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||
Sbjct 1244 CGGTGATGTCTCTGGTCTCGCAGAAAAGATACAAAGTTTCTTTATGCAAGAAGTTATCTC 1303
Query 1250 AGAAACCCACTCAGTGCTAAAGAGCATTGTTGGGGAGGATAACAGTGCTGCCACCCAATA 1309
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1304 AGAAACCCACTCAGTGCTAAAGAGCATTGTTGGGGAGGATAACAGTGCTGCCACCCAATA 1363
Query 1310 TAGTAGACTTACCTACAGCGATCTATGCCTTCAGACACCAGAATCCAAGTTTAGGCAATG 1369
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1364 TAGTAGACTTACCTACAGCGATCTATGCCTTCAAACACCAGAATCCAAGTTTAGGCAATG 1423
Query 1370 TCTTTTGAGAACACTAGCTGTGCTCTTTCAGTTAATATATTCATACCATGAGATAATGAG 1429
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1424 TCTTTTGAGAACACTAGCTGTGCTTTTTCAGTTAATATATTCATACCATGAGATAATGAG 1483
Query 1430 TTTCACGCCAGAAAAGAAGGTAGAAAGTTTGATCTCACCAAGTCCTGCAACAACTCAAAA 1489
|||||||||||||||| ||| ||||| |||| ||||||| |||| ||||||||||||||
Sbjct 1484 TTTCACGCCAGAAAAGGAGGCAGAAATTTTGGTCTCACCCAGTCTTGCAACAACTCAAAT 1543
Query 1490 GGTTGATTCAGTGACCGAAAGTTCATGCAACCCACAGGATGGTGGTCTCTTTTCAGGAAG 1549
||||||||||||||||| ||||||||| ||||||||||||||||||| || | |||||
Sbjct 1544 GGTTGATTCAGTGACCGGAAGTTCATGTGACCCACAGGATGGTGGTCTATTGCCGGGAAG 1603
Query 1550 CATACCTCCTTGTACCATTTCTGCTGAAGAGTCTGATGGAAGTGGAACATCCAGTTCAGT 1609
||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||
Sbjct 1604 CATACCTCCTTGTACCATTTCCGCTGAAGAGTCGGATGGAAGTGGAACATCCAGTTCAGT 1663
Query 1610 GCAACAT-GCGTCTGATATTGCAATAGATGAGTCTAGGAATTCTGGAGATACAGTATCAA 1668
||| | | |||||| |||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct 1664 GCAGC-TGGCGTCTAATATTGCAATAGATGAGTCTAGGAATTCTGAAGATAGAGTATCAA 1722
Query 1669 GTAGCGAGTCGCCATGGTACTATCTACGAAAAGAAAGTGCAGCTTTTGTTTCAGAAACTC 1728
|||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1723 GTAGCGAGTCACCATGGTACTATTTACGAAAAGAAAGTGCAGCTTTTGTTTCAGAAACTC 1782
Query 1729 TTCAGAGAGGACGCAGAAATCTTTGGCAACTTACAACAAGTCGTGTGTCAGTTTTGCTCT 1788
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1783 TTCAGAGAGGACGCAGAAATCTTTGGCAACTTACAACAAGCCGTGTGTCAGTTTTGCTCT 1842
Query 1789 CTTCCCCAGGTGCTTCTTCGACAAGTATACATCAGTTCCTAAAAAATTATGAAGACCTGA 1848
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1843 CTTCCCCAGGTGCTTCTTCAACAAGTATACATCAGTTCCTAAAAAATTATGAAGACCTGA 1902
Query 1849 GCATCTTTATCCTTGCTGGGGAAGCTTTCTGTGGATTTGAAGTTGTTGATTTTAGGGAGA 1908
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1903 GCATCTTTATCCTTGCTGGGGAAGCGTTCTGTGGATTTGAAGTTGTTGATTTTAGGGAGA 1962
Query 1909 AGCTAAAGGGTGTATGCGAAAATTATTTCACTGCATTTCATAGGCAAAGCATGCATGCGC 1968
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1963 AGCTAAAGGGTGTATGCGAAAATTATTTCACTGCATTTCATAGGCAAAGCATGCATGCGC 2022
Query 1969 TTAAAATGGTCCTGGAGAAGGAGACATGGACGAAACTGTCACCAGATACTGTGCAAGCTA 2028
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 2023 TTAAAATGGTCCTGGAGAAGGAGACATGGACGAAATTGTCACCAGATACTGTGCAAGCTA 2082
Query 2029 TTAATTTTGCTGGTCTTGTGGGGGATGGGGCTCCCCTAATTATTTCTTCCCGCAGTGCCT 2088
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2083 TTAATTTTGCTGGTCTTGTGGGGGATGGGGCTCCCCTAATTATTTCTTCCCGCAGTGCCT 2142
Query 2089 CGGGTTCTTCCAGATTCCCTCACTCTAATAAGTCAAATGACTCAATTGATCCAAGTGGCA 2148
| |||||||||||||||||||||||| ||||| ||| | |||||||||||||||||||||
Sbjct 2143 CAGGTTCTTCCAGATTCCCTCACTCTGATAAGCCAAGTAACTCAATTGATCCAAGTGGCA 2202
Query 2149 ACAGGAGTGGATTTTCATATTGGCTGAAAAGTGGAAACCCCTTCTCAGCAAAGTTAACTC 2208
|||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||
Sbjct 2203 ACAGGAGTGGATTTTCATATTGGCTGAAAAGTGGGAACCCGTTCTCAGCAAAGTTAACTC 2262
Query 2209 ACTATAGAGAAGATCAAGACTACTCCTCGGTCAATGGAGGAGATCATGAAGGTAATGATA 2268
||||||||||||||||||||||||||||| ||||||||| |||||||||||| |||||||
Sbjct 2263 ACTATAGAGAAGATCAAGACTACTCCTCGATCAATGGAGAAGATCATGAAGGGAATGATA 2322
Query 2269 GTATTCACGATGATGTTGTGAATCCCAAGATAACAGACA-AAAACCACATCAACGGAGGT 2327
||||||| ||||||||||||||||||||||||| ||||| |||| | |||||||||||||
Sbjct 2323 GTATTCATGATGATGTTGTGAATCCCAAGATAAGAGACATAAAA-CGCATCAACGGAGGT 2381
Query 2328 AGTCCTGTTTCTGAAGATGAAAACGAAGACCTTCTTGCTGACTTTATTGATGAGGATAGT 2387
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2382 AGTCCTGTTTCAGAAGATGAAAACGAAGACCTTCTTGCTGACTTTATTGATGAGGATAGC 2441
Query 2388 CAGCTTCCAAGACGAAGTTTTACACGTAGTCAATCAAGGAGTTCTTCTTCATATTTCAAT 2447
|||||||||||||||||||||||||||||||||||||||| |||||||||| |||| | |
Sbjct 2442 CAGCTTCCAAGACGAAGTTTTACACGTAGTCAATCAAGGACTTCTTCTTCACATTTTAGT 2501
Query 2448 ACTAATGATGATTTGACAGCTCAAACAGGATCGTCCCTTTGTCTTCTAAGATCCATGGAT 2507
|||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||
Sbjct 2502 ACTAATGATGATTTGACAGCTCAAACAGGATCATCCCTTTGTCTTCTAAGATCTATGGAT 2561
Query 2508 AAGTACGCGAGGCTTATGCAGAAACTAGAAATTGTTAATGTTGAATTCTTTAAGGGAATA 2567
||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||
Sbjct 2562 AAGTACGCGAGGCTTATGCAGAAGCTAGAAATTGTTAATGCTGAATTCTTTAAGGGAATA 2621
Query 2568 TGCCAATTGTTTGGGGTCTTTTTCTATTTCGTTTTTCAAGTATTTGGTCAAGAAAATACT 2627
|||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 2622 TGCCAATTGTTTGGAGTCTTTTTCTATTTCGTGTTTCAAGTATTTGGTCAAGAAAATACT 2681
Query 2628 AATTCAGGTGGAAAAGGAGTTGCCGACTCTTTCAATCCTCGTTTGAAAAGCTGCTTATCC 2687
||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||
Sbjct 2682 AATTCAGGTGGAAAAGGAGTTTCCGACTCTTTCAATCATCGTTTGAAAAGCTGCTTATCA 2741
Query 2688 CGGATATCACAAGAGTGTGAGCAATGGATAAAACCTCACCTTTCATCATCACCATCTTCT 2747
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 2742 CGGATATCACAAGAGTGTGAGCAATGGATAAAACCTCACGTTTCATCATCACCATCTTCT 2801
Query 2748 TCACTTGCCTTTCCCAACACAG-T--TAGTCTTGCGGATGTGACTCCAGCAAGTCCCTTA 2804
|||||||||||||||||||| | | ||||||||||||||||||||||||||||||||||
Sbjct 2802 TCACTTGCCTTTCCCAACACTGTTCATAGTCTTGCGGATGTGACTCCAGCAAGTCCCTTA 2861
Query 2805 AATACTTCTGGTCACTTATCAGGCGTATCTTTTAGTCTCAAGGAAAGATGTGCTGCTGTG 2864
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2862 AATACTTCTGGTCACTTATCAGGCGTATCTTTTAGTCTCAAGGAAAGATGTGCTGCTGTG 2921
Query 2865 GACACAGTATCTCTTGTGGCTCGGGTATTGCATAAATCAAAGGCTCATCTCCAATCAATG 2924
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2922 GACACAGTATCTCTTGTGGCTCGGGTATTGCATAAATCAAAGGCTCATCTCCAATCAATG 2981
Query 2925 -TTAATGTCAAGAAATGGCTCTCTGGTTGAAGACTTCTTTGATCAACTGGTTGGTTCCGT 2983
||| ||||||||||||| |||||||||||||||||||||| ||||||||||||||||||
Sbjct 2982 CTTA-TGTCAAGAAATGGGTCTCTGGTTGAAGACTTCTTTGGTCAACTGGTTGGTTCCGT 3040
Query 2984 ACCTGATCTGACAAAGCACTTACATAGGACAACTGCGAGGATACTGCTGCATGTTAATGG 3043
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3041 ACCTGATCTGACAGAGCACTTACATAGGACAACTGCGAGGATACTGCTGCATGTTAATGG 3100
Query 3044 ATATGTTGACCGGATAGCTAATTCTAAATGGGAAATCAAGGAGCTTGGAATGGAGCATAA 3103
|||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3101 ATATGTCGATCGGATAGCTAATTCTAAATGGGAAATCAAGGAGCTTGGAATGGAGCATAA 3160
Query 3104 TGGGTATGTTGATCTGATGCTCGGGGAATTCAAACACTACAAAACAAGGCTTGCTCATGG 3163
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3161 TGGGTATGTTGATTTGATGCTCGGGGAATTCAAACACTACAAAACAAGGCTTGCTCATGG 3220
Query 3164 AGGCATTCCACAGAAGGTCCAAAACCGCCTACT-GAAATATGGAGTTGAAATATTTGCGG 3222
||||||||||||| |||||||||||| |||||| ||| ||||||||||||||||||||||
Sbjct 3221 AGGCATTCCACAGGAGGTCCAAAACCTCCTACTTGAA-TATGGAGTTGAAATATTTGCGG 3279
Query 3223 AGATACTTGTTGAAGGCATATCTCGAATAAAAAGATGTACTGATGAAGGACGTGTTCTCA 3282
|||| || ||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 3280 AGATGCTGGTTGAAGGCTTATCTCGAATAAAAAGATGTACTGATGAAGGACGTGTTCTCA 3339
Query 3283 TGTCATTAGATCTTCAGGTTCTAATAAACGGGCTACAGCACTTTGTGCCAACAGATGTGA 3342
|||||||||||||||||||||||||||| ||| |||||||||||||||||||| | ||||
Sbjct 3340 TGTCATTAGATCTTCAGGTTCTAATAAATGGGTTACAGCACTTTGTGCCAACAAAAGTGA 3399
Query 3343 AGGAAAAGTTAAAGATAGTCGTAACATTTATCAAGGCGTACTATCTGCCAGAGACGGAAC 3402
|| ||||||| ||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 3400 AGCCAAAGTTACAGATAGTCGAAACATTTATCAAGGCGTACTATCTGCCAGAGACGGAAT 3459
Query 3403 ATGTTCACTGGGCAAGGGCTCATCCGGAATATACAAAAGCACAGGTCCTTGGACTGGTGA 3462
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 3460 ATGTTCACTGGGCAAGGGCTCATCCGGAATATACAAAAGCACAGGTCGTTGGACTGGTGA 3519
Query 3463 ATTTAGTAGCCACCATGAAAGGTTGGAAAAGGAAAACGCGGCTGGAAGTTATCGAGAAGA 3522
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3520 ATTTAGTAGCCACCATGAAAGGTTGGAAAAGGAAAACGCGGCTGGAAGTTATCGAGAAGA 3579
Query 3523 TCGAATCAGCTTC-ACTGTAGATCAA-CT-AGAAGCATCTGGCAGCTTCACGACATCA 3577
|||||||||| || | |||||||||| || |||||| |||||||||||| ||||||||
Sbjct 3580 TCGAATCAGCGTCTA-TGTAGATCAATCTTAGAAGCTTCTGGCAGCTTCGCGACATCA 3636
> AT2G27920.1 | Symbols: SCPL51 | serine carboxypeptidase-like
51 | chr2:11885571-11889176 REVERSE LENGTH=1725
Length=1725
Score = 200 bits (108), Expect = 8e-50
Identities = 118/123 (96%), Gaps = 0/123 (0%)
Strand=Plus/Minus
Query 3574 ATCAGATGTGAAAGGAGTCATATTGTGATGTGAAAGTTTGGAAGAAAGAATGGGCCAAAG 3633
||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||
Sbjct 1573 ATCAGATGTGAAAGGAGTCATATTGTGATGTGAGAGTTTGGAAGAAAGAATGGGTCAAAG 1514
Query 3634 TTGTGGTGACTTCGTTATTTCTCCAACCATTTTTAATGCAACACATGGCTCATCTACTGG 3693
|||||||||||| ||||| |||||||||||||||||||| ||||||||||||||||||||
Sbjct 1513 TTGTGGTGACTTGGTTATCTCTCCAACCATTTTTAATGCTACACATGGCTCATCTACTGG 1454
Query 3694 TAC 3696
|||
Sbjct 1453 TAC 1451
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 184514016354
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5