BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg481739 Length=714 Score E Sequences producing significant alignments: (Bits) Value AT2G27740.1 | Symbols: | Family of unknown function (DUF662) ... 1057 0.0 > AT2G27740.1 | Symbols: | Family of unknown function (DUF662) | chr2:11822732-11823732 FORWARD LENGTH=750 Length=750 Score = 1057 bits (572), Expect = 0.0 Identities = 660/701 (94%), Gaps = 11/701 (2%) Strand=Plus/Plus Query 24 ATTTAGGAAGAGAAAAAGGATCTGAGAAACAATGGCAACGACAAGACAGATCTTGGAACA 83 ||| |||||||||||||||||||||| ||||||||| |||||||||||||||||||| || Sbjct 38 ATTGAGGAAGAGAAAAAGGATCTGAGGAACAATGGCTACGACAAGACAGATCTTGGAGCA 97 Query 84 GCCACAATCGCCATTGATGCAACGCATCAAGAGCTCGGGGAACATTAGCATGAACGGCAG 143 ||||||||||||||| || ||||| ||||||||||||||||||||||||||||| ||||| Sbjct 98 GCCACAATCGCCATTTATTCAACGTATCAAGAGCTCGGGGAACATTAGCATGAATGGCAG 157 Query 144 TCCTATGATTGATGACAAAGAAGAGGAGCTTTCACAGTCTGCTTTTGCTTTGTTTAAGGC 203 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 158 TCCTATGATTGATGAGAAAGAAGAGGAGCTTTCACAGTCTGCTTTTGCTTTGTTTAAGGC 217 Query 204 AAAAGAAGATGAGATTGAGAGGAGGAAGATGGAGGTTAAAGATAGGGTCCAGACAAAGCT 263 ||| ||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| Sbjct 218 AAAGGAAGATGAGATTGAGAGGAGGAAGATGGAGGTTAAGGATAGGGTCCAGAAAAAGCT 277 Query 264 TGGACTCGCTGAGGAAGCTACTAGAAGATTAGCCGAGATTCGGGAAGAACTGGAAGCTCT 323 |||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 278 TGGACTCGCTGAGGAAGCTACTAGAAGATTAGCCGAGATTCGGGAAGAGCTTGAAGCTCT 337 Query 324 TACTGATCCAATGAGAAAAGAGATATCCGCGATAAGGAAAAGAGTCGATGCTATTAACCG 383 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 338 TACCGATCCAATGAGAAAAGAGATATCCGCGATAAGGAAAAGAGTCGATGCTATTAACCG 397 Query 384 GGAACTTAAGCCTTTAGGACAGAGTTGTCAGAGAAAGGAGAGAGAATTCAAAGAAGCGCT 443 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 398 AGAACTCAAGCCTTTAGGACAGAGTTGTCAGAGAAAGGAGAGAGAATTCAAAGAAGCACT 457 Query 444 TGAAGCTTACAATGAAAAGAACAAAGAGAAAGCTATATTTGTTAGCAAGCTAGTTGAGCT 503 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 458 TGAAGCTTACAATGAAAAGAACAAAGAGAAAGCTATATTTGTTAGCAAGCTAGTTGAGCT 517 Query 504 GGTTACCGAAAGCGAGAAACTGCGGATGACAAAGCTAGAGGAACTCAGCAAAAGCATTGA 563 ||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 518 GGTCACCGAAAGCGAGAAACTGCGGATGACAAAGCTGGAGGAACTCAGCAAAAGCATTGA 577 Query 564 AATATCGCTACGCTAACACAAGATGA-A--------GGCTATAAAAGCAGCCAActttaa 614 ||||||||||||||||||||| |||| | |||| ||||||||||| |||| Sbjct 578 AATATCGCTACGCTAACACAAAATGATAACAATAAAGGCTGCAAAAGCAGCCAGCTTTGG 637 Query 615 tttcttctttcttcttcgctttttaattgtttgattcgatatttgcttttctG-TGTGAT 673 ||||||||||||||| | |||| ||||||||||||||||||||||||||| || |||||| Sbjct 638 TTTCTTCTTTCTTCTGCTCTTTGTAATTGTTTGATTCGATATTTGCTTTT-TGGTGTGAT 696 Query 674 CAAATCTGTTTTCCTGATTCAGTAACCTTAGAAGAAATGTG 714 ||||||||||||||||||||||||||||||| ||||||||| Sbjct 697 CAAATCTGTTTTCCTGATTCAGTAACCTTAGTAGAAATGTG 737 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 34611327283 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5