BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg481786 Length=321 Score E Sequences producing significant alignments: (Bits) Value AT2G28725.1 | Symbols: | unknown protein; BEST Arabidopsis tha... 472 1e-132 > AT2G28725.1 | Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G07795.1); Has 35 Blast hits to 35 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr2:12328605-12328943 FORWARD LENGTH=339 Length=339 Score = 472 bits (255), Expect = 1e-132 Identities = 299/321 (93%), Gaps = 0/321 (0%) Strand=Plus/Plus Query 1 ATGGAACCAATTCTTGAAAAAATCTCAACTCCTTGGCAAGTTCTTGTTCAAACAGCAACA 60 |||||||||||||||||||||| |||||| | |||| ||||||||||||||||||||||| Sbjct 1 ATGGAACCAATTCTTGAAAAAACCTCAACACGTTGGGAAGTTCTTGTTCAAACAGCAACA 60 Query 61 TGGACAATACTCCTAATGATCACAGTGTCTTTGGCTTCATTTGCTCCAGAAATGGCGTTT 120 |||||||| |||||||||||||||||| ||||||||||||||||||| || ||||||||| Sbjct 61 TGGACAATTCTCCTAATGATCACAGTGGCTTTGGCTTCATTTGCTCCGGAGATGGCGTTT 120 Query 121 GTGTCGAAAATAAAATCATCTTCCGATGGGTTCGTTAGGATTCCGATGGATTTATCGGGA 180 ||||||||| |||| ||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 121 GTGTCGAAATTAAAGTCATCTTCCGATGGGTTCGTTAGGATTCCGATGGATTTACCGGGA 180 Query 181 GAAATGTTGATCTTACCGTCGGAGATGGTGAAGAACTCATCTTTAGACGTTTTTATACCG 240 |||||||| ||||| ||||| || ||||||||||| |||| ||||||||||||| |||| Sbjct 181 GAAATGTTAATCTTGCCGTCAGAAATGGTGAAGAATTCATATTTAGACGTTTTTTTACCA 240 Query 241 ACGATATTCGCAGGTGTTATGGTCATTGCTTCTGTTTCTTTATTACGATCATGTCTTGGT 300 |||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 241 ACGATATTCGCAGGAGTTATGGTCATTGCTTCTGTTTCTTTATTACGATCATGTTTTGGT 300 Query 301 ATTGAAGGTGTTGTAGTAGAA 321 |||||||||||||||| |||| Sbjct 301 ATTGAAGGTGTTGTAGAAGAA 321 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 14929521453 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5