BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg481819
Length=3408
Score E
Sequences producing significant alignments: (Bits) Value
AT2G29010.1 | Symbols: | pseudogene, receptor protein kinase, ... 1962 0.0
AT5G59660.1 | Symbols: | Leucine-rich repeat protein kinase fa... 87.9 6e-16
AT5G59680.1 | Symbols: | Leucine-rich repeat protein kinase fa... 87.9 6e-16
AT3G46330.1 | Symbols: MEE39 | Leucine-rich repeat protein kina... 80.5 1e-13
> AT2G29010.1 | Symbols: | pseudogene, receptor protein kinase,
contains a protein kinase domain (PS50011); contains a S-locus
glycoprotein family domain (PF00954); contains LRR Leucine
Rich Repeat domains; blastp match of 42% identity and 3.1e-185
P-value to GP|9837280|gb|AAG00510.1||AF285172 leaf senescence-associated
receptor-like protein kinase {Phaseolus
vulgaris} | chr2:12465764-12469464 FORWARD LENGTH=3701
Length=3701
Score = 1962 bits (1062), Expect = 0.0
Identities = 1361/1501 (91%), Gaps = 37/1501 (2%)
Strand=Plus/Plus
Query 24 ATTCGACATGATCTTTATCTCACCTCTTACCAGAATTCATCAACTTAGATTGCGGTTTAC 83
|||||||||||| ||||| || |||||||||||||||||| ||||| |||||||| | ||
Sbjct 54 ATTCGACATGATTTTTATGTCGCCTCTTACCAGAATTCATTAACTTGGATTGCGGGTAAC 113
Query 84 ACCCCGCGGTATCTCCTTATACCGAACCATTAAC-AACATTAACATACATATCCGATGCC 142
|||| |||||||| |||||||||||||||||||| ||| ||||||||| ||||||| ||
Sbjct 114 ACCCTGCGGTATCGCCTTATACCGAACCATTAACAAAC-TTAACATACCTATCCGACGCT 172
Query 143 AACTTCACTCAAGGTGGTCAAAGTGGTAGAGTCCAAAAGATTTGGGAAGAAGCTTATAAG 202
|||||||| ||||||||||||||||| |||||||||||| ||||||||||||||||| ||
Sbjct 173 AACTTCACCCAAGGTGGTCAAAGTGGAAGAGTCCAAAAGGTTTGGGAAGAAGCTTATCAG 232
Query 203 CCATTCACAGTTCTAAGATATTTTCCAGACGGAATACGAAACTGCTATAACTTAAGGGTC 262
|||||||||||||||||||| ||||| || ||||||||||||||||||||||| ||||||
Sbjct 233 CCATTCACAGTTCTAAGATACTTTCCGGATGGAATACGAAACTGCTATAACTTGAGGGTC 292
Query 263 ACTCCATCCA-AAAAGTATCTTATCAAAGCTCTCTTTCTCTACGGAAACTACGACGGGCT 321
|||||||||| |||| |||||||||||||||||||||||||| ||||| || ||||||||
Sbjct 293 ACTCCATCCACAAAA-TATCTTATCAAAGCTCTCTTTCTCTATGGAAATTATGACGGGCT 351
Query 322 TAACAATGGCCCGATATTTGATCTATATCTAGGTCCTAACATATGGACAACGGTCGATTT 381
|||||||| ||||||||| ||||| |||||||||||||||||||||||||||||||||||
Sbjct 352 TAACAATGCCCCGATATTCGATCTGTATCTAGGTCCTAACATATGGACAACGGTCGATTT 411
Query 382 GAAAAGCTCATTACTTTCTCAAACGGAAGAGATCATACACATCACAAAGTCAAGCTCTTT 441
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 412 GAAAAGCTCTTTACTTTCTCAAACGGAAGAGATCATACACATCACAAAGTCAAGCTCTTT 471
Query 442 GGAGATTTGTCTTGTTAAAACAGGGAAGACTACACCAATCATCTCAGCCTTGGAACTAAG 501
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 472 GGAGATTTGTCTTGTTAAAACAGGGAAGACTACACCAATCATCTCAGCCTTGGAACTAAG 531
Query 502 ACCTTTGAGAGATGACACTTACATCACTCAAAATGGTTCCTTAAAGCTCTTAAAACGCTA 561
||||||||||||||||| |||||| ||||||| ||||||||| |||||||||||||||||
Sbjct 532 ACCTTTGAGAGATGACATTTACATTACTCAAATTGGTTCCTTGAAGCTCTTAAAACGCTA 591
Query 562 CTACGCTAGCAATTTTTTCGGTCCTTCGATTCGGTAATTTAACTTTGCTTACTTTCCAAG 621
|| |||||| ||||| ||||||||||||||||||||||||||||| ||| |||| ||||
Sbjct 592 TTATGCTAGCGATTTTCTCGGTCCTTCGATTCGGTAATTTAACTTTACTTGCTTTACAAG 651
Query 622 AAACAGA-----G---TTTTGTTAATAAAAATAAAGGTTTGATCATTGTTTTTTATTGTT 673
||||||| | ||||||||||| ||||||||||||| | |||||| |||| | ||
Sbjct 652 AAACAGAGTTTTGTAATTTTGTTAATACAAATAAAGGTTTGGTAATTGTTGTTTAATATT 711
Query 674 CAGGTATCCTTTAGATATATATGATCGTGAGTGGAAGCCAATAAGTCTTTCGTTTGGCTT 733
||||||||| | |||| ||||||||||||| |||||||||||||||||||||||||||||
Sbjct 712 CAGGTATCCGTCAGATGTATATGATCGTGAATGGAAGCCAATAAGTCTTTCGTTTGGCTT 771
Query 734 GACTTTCATAAACACTAGTCTCAATGTAAATTCCTCTACTCCTTATCAGCTACCACAAGA 793
|| |||| ||||||| ||||||| ||| || || || ||||||||| |||||||||||||
Sbjct 772 GAATTTCGTAAACACAAGTCTCAGTGTGAACTCTTCCACTCCTTATGAGCTACCACAAGA 831
Query 794 ACTAATCTCAAAGGCAATCACTAACAAAAATGTGACTGAGAAGTTATCTTTCGACTGGTA 853
| | |||||||||||||||| |||| |||| |||||||||||||||||||||||||||||
Sbjct 832 AGT-ATCTCAAAGGCAATCATTAACGAAAACGTGACTGAGAAGTTATCTTTCGACTGGTA 890
Query 854 TGTCGATAACCGCGAAGATCAAGCTCTCATCTACCTACATTTTGCTGAGATTCAAACACT 913
||||||||||||||| |||||||||||||| ||||| ||||| |||||||||||| ||||
Sbjct 891 TGTCGATAACCGCGAGGATCAAGCTCTCATATACCTTCATTTCGCTGAGATTCAATCACT 950
Query 914 TAAAGGCAATGACACAAGAGAGTTTGACATTATATGGAAAGGAAACGATGGAAACATTAC 973
|||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||
Sbjct 951 TAAAGGCAATGACACAAGAGAGTTCGACATTATATGGAAAGGGAACGATGGAAACATTAC 1010
Query 974 CATTTCAGCTTATCGCCCTTCGAAGTTTCAGCTAGAGACTTTATACAACACATCGCCTAT 1033
||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||
Sbjct 1011 CATTTCAGCTTATCGCCCTTCGAAGTTACAGCTAGAGACTCTATACAACACATCGCCTAT 1070
Query 1034 GAAATGTAAGTTTATGCAATGTACAGTGGAGCTGGTTATGACTAAGAGCTCAACGCTCCC 1093
|||||||| ||||||||||||||||||||| || |||||||||||||||||||| |||||
Sbjct 1071 GAAATGTAGGTTTATGCAATGTACAGTGGAACTTGTTATGACTAAGAGCTCAACTCTCCC 1130
Query 1094 ACCAATGATCAATGCTATGGAAGCTTACCAGATTATTGAGTTCCCGGATGCAGAAACTAA 1153
|||||||||||||||||||||||||||||| ||||| |||||| | ||||||||||||||
Sbjct 1131 ACCAATGATCAATGCTATGGAAGCTTACCAAATTATAGAGTTCTCAGATGCAGAAACTAA 1190
Query 1154 TCCAGAGGATGGTTAGTCAATCTTCACTAGTATTGAATTTTTGCGATATTTACCTATGTT 1213
||||||||||||||||||||||||||||| || |||||||| ||||||||| ||||||
Sbjct 1191 TCCAGAGGATGGTTAGTCAATCTTCACTACTAATGAATTTTCGCGATATTTTTATATGTT 1250
Query 1214 TCTGTAT-TCTAATTTTGGTTTTATT-GTCAGTCGTTGTGGTCCAGAATGTTCGAGCTAC 1271
|| |||| | || ||||||||||||| | ||||||||| |||||||||| || ||||| |
Sbjct 1251 TCGGTATATTTA-TTTTGGTTTTATTTG-CAGTCGTTGCGGTCCAGAATATTAGAGCTGC 1308
Query 1272 TTACGAATTGAGTAAAATCGACTGGCAAGGAGATCCGTGTGTTCCTCGATTGTTCAAATG 1331
||| |||||||||| ||| ||||||||||||||||||||||||||||| |||||||||||
Sbjct 1309 TTATGAATTGAGTAGAATAGACTGGCAAGGAGATCCGTGTGTTCCTCGGTTGTTCAAATG 1368
Query 1332 GGAGGGAATAAATTGCAGCAACACAAATGCTTCTATTCCACCAAGAATCATATCCTTGTA 1391
|||||| |||||||||||| |||||||| |||||||||||||||||||||| ||||||||
Sbjct 1369 GGAGGGGATAAATTGCAGCTACACAAATACTTCTATTCCACCAAGAATCATTTCCTTGTA 1428
Query 1392 AGAATATTTAATTACAGATTT-A--A-T-T-AAA--T-A-T--------CT-TAAAAT-G 1431
||| |||||||| |||||||| | | | | ||| | | | || |||||| |
Sbjct 1429 AGACTATTTAATAACAGATTTGATTACTATTAAAAATCAGTGTTTAAATCTCTAAAATTG 1488
Query 1432 TGTGTTCTGTTTTTATAACCAGAGACTTATCATCAAGTGGACTAAAGGGGGTCATAGCAC 1491
|||||| |||| |||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1489 TGTGTTATGTTCTTATAACCAGAGACTTATCATCAAGTGGACTAAATGGGGTCATAGCAC 1548
Query 1492 C 1492
|
Sbjct 1549 C 1549
Score = 1092 bits (591), Expect = 0.0
Identities = 759/836 (91%), Gaps = 28/836 (3%)
Strand=Plus/Plus
Query 1527 ATTTATTGTTATCGTAATCGACTAATAGGGACTTATCGAATAACAATCTAACTGGAGGGG 1586
||| ||||||||||||||||| | |||||||||||||||||||||||||||||||||| |
Sbjct 1646 ATTAATTGTTATCGTAATCGATTGATAGGGACTTATCGAATAACAATCTAACTGGAGGAG 1705
Query 1587 TGCCTGAATTTCTAGCCAACATGGAATCATTGTTGATCATGTGAGTTTATTTCATGGCAA 1646
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1706 TGCCTGAATTTCTAGCCAACATGGAATCATTGTTGATCATGTGAGTTTATTTCATGGTAA 1765
Query 1647 ACAATAAGTGATCAT-ACTTTCTTGCACCAGATTTATGGATGATG--TGTATATACCATA 1703
||||||||||||||| | ||||||||||||||||||||||||||| | |||||| ||||
Sbjct 1766 ACAATAAGTGATCATGA-TTTCTTGCACCAGATTTATGGATGATGTTTATATATATCATA 1824
Query 1704 ATGTTCTTCTCTGTTTTGACAGAAACTTAGGTTGGAATAGCTTAACCGGTCCGATTCCTC 1763
|||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1825 ATGTTCTTATCTGTTTTGACAGAAACTTAGGTTGGAATAGCTTAACCGGTCCAATTCCTC 1884
Query 1764 TAGCCCTTCGCAATAGAGAAAAGAAAGGACTAAAATTGGTGTAAG--TT-T-C------- 1812
|||||||| |||||||||||||||||| |||||||||||||||| || | |
Sbjct 1885 GAGCCCTTCACAATAGAGAAAAGAAAGGGCTAAAATTGGTGTAAGATTTCTCCTTAATGG 1944
Query 1813 ------TTGTCCCTGATGATTTTGCGTATTCAATAACATTCTTGTTATTTAGTGTTCAAG 1866
|||| | ||||||||||||||||||||||||||||||||| | |||||||||||
Sbjct 1945 TTTTTTTTGTTCGTGATGATTTTGCGTATTCAATAACATTCTTGTTCTATAGTGTTCAAG 2004
Query 1867 GAAACCCAAATCTATGTCTCTCTGACTCATGCAAGAACAAGAAAGTCCTAGTGCCGGTTT 1926
|||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||
Sbjct 2005 GAAACCCAAATCTATGTCTCTCTGGCTCATGCAAGAACACGAAAGTCCTAGTGCCGGTTT 2064
Query 1927 TTGCATCCCTTGCTTCAATGGCGGCTCTTATCGCCTTGTTGGGTCTCATTTTTGTTTTGA 1986
|||| || ||||||||| |||||||||||||||| ||||||| |||||||||||||||||
Sbjct 2065 TTGCGTCTCTTGCTTCATTGGCGGCTCTTATCGCTTTGTTGGCTCTCATTTTTGTTTTGA 2124
Query 1987 GAAAGAAAAAGCCCTTATCAAAAGGTATA--TAGATA--T--ATCAATCAAGATGCACAC 2040
||| |||||||||| |||||||||||||| || ||| | ||||||||||| | |||
Sbjct 2125 GAAGGAAAAAGCCCGTATCAAAAGGTATAAATAAATAGATTCATCAATCAAGAAGTACAT 2184
Query 2041 AAAGGCTTAATACTCTGTTAAGTTTCATGGTATATAATAATGGCATTGCTTATATGATTT 2100
|| ||||||||||||||| ||||| |||||||| || |||||||||| |||||||| |
Sbjct 2185 AAGGGCTTAATACTCTGTAAAGTT-CATGGTATGTAGTAATGGCATTACTTATATGGCCT 2243
Query 2101 TTCCATATACAGTTGCTACACGCGAGTTACCAAGAAAGTCATCTATCTTTGCCAAAAAGA 2160
|||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||
Sbjct 2244 TTCCATATACAGTTGCTACACGGGAGTTACCAAGAAAGTCATCAATCTTTGCCAAAAAGA 2303
Query 2161 AAAAGTTCACTTATTTGGAAGTCGTTGAGCTAACGGATAACTTCAAAAGAGTTCTTGGAG 2220
||||||||||||||| ||||||||||||||| ||| ||||||||| ||||||||||||||
Sbjct 2304 AAAAGTTCACTTATTCGGAAGTCGTTGAGCTTACGAATAACTTCAGAAGAGTTCTTGGAG 2363
Query 2221 AAGGAGGATTTGGAGTTGTCTACCACGGTTCTTTGAGTGATACCGAACCAGTAGCGGTTA 2280
||||||| || |||||||||||||| |||||||||||||||||||||| |||||||||||
Sbjct 2364 AAGGAGGCTTCGGAGTTGTCTACCATGGTTCTTTGAGTGATACCGAACAAGTAGCGGTTA 2423
Query 2281 AAGTTCTTTCCGAGTCATCAGTTCAAGGCTATAAAGAATTTAAGGCAGAGGTATGT 2336
||||||||||||||||||| |||||||||||||| |||||||||||||||||||||
Sbjct 2424 AAGTTCTTTCCGAGTCATCCGTTCAAGGCTATAAGGAATTTAAGGCAGAGGTATGT 2479
Score = 878 bits (475), Expect = 0.0
Identities = 704/807 (87%), Gaps = 45/807 (6%)
Strand=Plus/Plus
Query 2637 ACATTATGAAGTACTTAAACTTCATATA-CTTACCCATTCCTTTTTGGCCTACCAAC--T 2693
||||||| |||| ||| ||||||||||| ||| || || |||||||||||||||||| |
Sbjct 2905 ACATTATAAAGTTCTTCAACTTCATATATCTT-CCAATCCCTTTTTGGCCTACCAACTTT 2963
Query 2694 -ATACAAT-AATCGCTCAACATAGAGATGATTTTTTGTCCATAGGTTTAGAGTGTTTGCA 2751
|| ||| | || |||||||| || | ||||||| | ||||||||||||| ||||||
Sbjct 2964 GCTATAATCACTCACTCAACATGGATACAATTTTTTAACAATAGGTTTAGAGTATTTGCA 3023
Query 2752 TGTTGGGTGTGAGCCGCCAATGGTTCATAGAGATGTCAAAACTACGAATATACTATTAGA 2811
||||||||||||||| ||||||||||||||||||||||||| |||||| |||||||||||
Sbjct 3024 TGTTGGGTGTGAGCCACCAATGGTTCATAGAGATGTCAAAAGTACGAACATACTATTAGA 3083
Query 2812 CT-ATCGTTTCGAAGCCAAACTCGCGGATTTTGGACTCTCAAGATCATTTTCTGTCGGAG 2870
| |||||||||||| ||||||||||||||||||||| |||||||| |||||||||||||
Sbjct 3084 -TAATCGTTTCGAAG-CAAACTCGCGGATTTTGGACTTTCAAGATCGTTTTCTGTCGGAG 3141
Query 2871 CTGAAACTCAAGTGGCAACAGTTGTTGCAGGAACTCCCGTATATCTTGATCCTGAGTAAG 2930
||||||||||||||||||| |||||||||||||| |||| ||||||||||||||||||||
Sbjct 3142 CTGAAACTCAAGTGGCAACGGTTGTTGCAGGAACACCCGGATATCTTGATCCTGAGTAAG 3201
Query 2931 TTTTCTAACTCATAGACCATGATATGT--TGTATTTTGAACTTGtttttttCCTTCATTA 2988
|| ||||| |||||||| | | || | |||| |||||||||||||||||||||||||
Sbjct 3202 TTCTCTAATTCATAGAC-A-GCTACATAATGTAACTTGAACTTGTTTTTTTCCTTCATTA 3259
Query 2989 AGTCCCATAAAATT-AACttttttttGTAGATATTACCTAACAAATTGGTTAAACGGGAA 3047
||| ||||||| || ||||| || | |||||||||||||||||||||||||||| |||
Sbjct 3260 AGTTCCATAAACTTCAACTTCTT---GCAGATATTACCTAACAAATTGGTTAAACGAGAA 3316
Query 3048 GAGCGATGTCTATAGTTTTGGCATAGTACTCATCGAAATAATCACAAACCGATCAGTGAT 3107
|||||| ||||| ||||| || ||||||||||||||||| ||||||||||||||||||||
Sbjct 3317 GAGCGACGTCTACAGTTTCGGAATAGTACTCATCGAAATCATCACAAACCGATCAGTGAT 3376
Query 3108 TGAGCTAACCCGA--------TC-----G-AGAA-----AAAGCT-CATATA-GCAGAGG 3146
||| ||||||||| || | |||| |||| | | |||| |||||||
Sbjct 3377 TGAACTAACCCGAGAAAAAGCTCATATAGCAGAATGGGTAAAGATTCTTATAAGCAGAGG 3436
Query 3147 AGACATTGAAAAAATCGTCGAC-CTAAACCTTAATGGAGATTACGACTCAAACACAATCT 3205
|||||| ||||||||||||||| | ||||||||||||||||||||||||||||||| |||
Sbjct 3437 AGACATCGAAAAAATCGTCGACAC-AAACCTTAATGGAGATTACGACTCAAACACAGTCT 3495
Query 3206 GGAGAATTCTTGAACTAGCCATGTCATGCGTAAGCCACTCTTCATCAGATAGACCAACCA 3265
|||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 3496 GGAGGATTCTTGAACTAGCAATGTCATGCGTAAGCCACTCTTCATCAGATAGACCAACCA 3555
Query 3266 TGTCCAAAGTAGTTAATATACTTAAAGAGTGCTTGATCTCTGAGAAATC-AAGAACAGGA 3324
|||||||||| |||||||||||||||||||||||| |||| || |||| ||||||| ||
Sbjct 3556 TGTCCAAAGTTGTTAATATACTTAAAGAGTGCTTGCTCTCAGA-AAATTTAAGAACAAGA 3614
Query 3325 CAAATTCATCAAGATGATGA---TGACTCAAAGAACTCAGACTTGACTATAAATTTCGGA 3381
|| |||||||||||| |||| ||||||||||||||||||||||||| |||||||||||
Sbjct 3615 CAGATTCATCAAGATAATGACGATGACTCAAAGAACTCAGACTTGACTTTAAATTTCGGA 3674
Query 3382 ACCGAAGTAACCCCTCTTGCACGCTAG 3408
|| ||||||||||||||||||||||||
Sbjct 3675 ACTGAAGTAACCCCTCTTGCACGCTAG 3701
Score = 254 bits (137), Expect = 5e-66
Identities = 171/186 (92%), Gaps = 7/186 (4%)
Strand=Plus/Plus
Query 2354 AAAAGGTGGAGCTTCTAT-TAAGAGTTCATCACATAAACTTGGTAAGCCTTGTTGGTTAC 2412
|||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct 2553 AAAAGGTGGAGCTTCT-TCTAAGAGTTCATCACATAAACTTGGTAAGCCTTGTTGGTTAC 2611
Query 2413 TGTGATGAAGGAGGTCATTTGGCACTCATCTATGAGTACATGGCTAATGGAGACCTTAAA 2472
|||||||||||||| ||||| ||||| || ||||||||||||||||||||||||||||||
Sbjct 2612 TGTGATGAAGGAGGCCATTTAGCACTTATATATGAGTACATGGCTAATGGAGACCTTAAA 2671
Query 2473 CAACATTTATCAGGTAATTAAACATTAAT-AG--TTGA--TGTCTTTATTTGTCTTTGAA 2527
|||||| ||||||||||||||||| |||| | |||| |||||||||| |||||||||
Sbjct 2672 CAACATCTATCAGGTAATTAAACACTAATTATACTTGACATGTCTTTATTCGTCTTTGAA 2731
Query 2528 TCAATT 2533
||||||
Sbjct 2732 TCAATT 2737
Score = 161 bits (87), Expect = 3e-38
Identities = 106/114 (93%), Gaps = 5/114 (4%)
Strand=Plus/Plus
Query 2531 ATTTAGCATTTTCATTTACAGGAGAATGC-TCTGGACCTACTTTGAAATGGGCTAGTAGA 2589
|||||||||||| |||||||||||||| | ||||||||||||||||||||||||||||||
Sbjct 2764 ATTTAGCATTTTTATTTACAGGAGAAT-CTTCTGGACCTACTTTGAAATGGGCTAGTAGA 2822
Query 2590 CTAAAAATTGCTATTGAGGCGGCACAAGGTT-AATTCTTGCTAACTTTA-CATT 2641
|| ||||||||||| |||||||||||||||| ||| ||||||||||||| ||||
Sbjct 2823 CTCAAAATTGCTATCGAGGCGGCACAAGGTTTAAT-CTTGCTAACTTTAACATT 2875
> AT5G59660.1 | Symbols: | Leucine-rich repeat protein kinase
family protein | chr5:24035687-24039979 FORWARD LENGTH=2559
Length=2559
Score = 87.9 bits (47), Expect = 6e-16
Identities = 82/98 (84%), Gaps = 5/98 (5%)
Strand=Plus/Plus
Query 2765 CCGCCAATGGTTCATAGAGATGTCAAAACTACGAATATACTATTAGACT-ATCGTTTCGA 2823
|||||||||||||||||||||||||||||| | || ||| | |||| | | |||| |
Sbjct 1810 CCGCCAATGGTTCATAGAGATGTCAAAACTGCCAACATATTGCTAGA-TGAGAATTTC-A 1867
Query 2824 AG-CCAAACTCGCGGATTTTGGACTCTCAAGATCATTT 2860
|| |||||||||| |||||||| ||||||||||| |||
Sbjct 1868 AGGCCAAACTCGCTGATTTTGGTCTCTCAAGATC-TTT 1904
> AT5G59680.1 | Symbols: | Leucine-rich repeat protein kinase
family protein | chr5:24046792-24050801 FORWARD LENGTH=2664
Length=2664
Score = 87.9 bits (47), Expect = 6e-16
Identities = 124/160 (78%), Gaps = 10/160 (6%)
Strand=Plus/Plus
Query 2768 CCAATGGTTCATAGAGATGTCAAAACTACGAATATACTATTAGACTATCGTT-TCGAAG- 2825
||||||||||||||||||||||||||||| || ||| | | ||| | | || | |||
Sbjct 2098 CCAATGGTTCATAGAGATGTCAAAACTACAAACATATTGCTGGACGAGCATTAT--AAGG 2155
Query 2826 CCAAACTCGCGGATTTTGGACTCTCAAGATCATTTTC-TGTCGGAGCTGAAACTCAAGTG 2884
||||||| || |||||||| ||||| ||||| ||| | ||| |||| |||| |||| ||
Sbjct 2156 CCAAACTTGCTGATTTTGGGCTCTCGAGATC-TTTCCCTGTTGGAGGTGAATCTCATGTT 2214
Query 2885 GCAACAGTTG-TTGCAGGAACTCCCG-TATATCTTGATCC 2922
| || || | |||| || ||||| | | || ||||||||
Sbjct 2215 TCGACGGT-GATTGCTGGTACTCCTGGT-TACCTTGATCC 2252
> AT3G46330.1 | Symbols: MEE39 | Leucine-rich repeat protein kinase
family protein | chr3:17020747-17025011 REVERSE LENGTH=2904
Length=2904
Score = 80.5 bits (43), Expect = 1e-13
Identities = 137/183 (75%), Gaps = 4/183 (2%)
Strand=Plus/Plus
Query 2152 CCAAAAAGAAAAAGTTCACTTATTTGGAAGTCGTTGAGCTAACGGATAACTT-CAAAAGA 2210
|||||||||||| ||| ||||||| ||||| | || | || | ||||| | |||||
Sbjct 1779 CCAAAAAGAAAAGGTTTACTTATTCAGAAGTTATGGAAATGACTAAGAACTTGC-AAAGA 1837
Query 2211 GTTCTTGGAGAAGGAGGATTTGGAGTTGTCTACCACGGTTCTTTGAGT-GATACCGAACC 2269
|||||| ||||| || ||||| ||||| || || || | | | | | | | || |
Sbjct 1838 CCTCTTGGGGAAGGGGGGTTTGGTGTTGTTTATCATGGCGATCTAAATGGCT-CAGAGCA 1896
Query 2270 AGTAGCGGTTAAAGTTCTTTCCGAGTCATCAGTTCAAGGCTATAAAGAATTTAAGGCAGA 2329
|||||| || ||| | || ||| | |||||| ||||||||||||||||||||||||||
Sbjct 1897 AGTAGCTGTCAAACTACTATCCCAAACATCAGCACAAGGCTATAAAGAATTTAAGGCAGA 1956
Query 2330 GGT 2332
|||
Sbjct 1957 GGT 1959
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 169614434283
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5