BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg481863
Length=790
Score E
Sequences producing significant alignments: (Bits) Value
AT2G29470.1 | Symbols: ATGSTU3, GST21, GSTU3 | glutathione S-tr... 1254 0.0
AT2G29460.1 | Symbols: ATGSTU4, GST22, GSTU4 | glutathione S-tr... 651 0.0
AT2G29490.1 | Symbols: ATGSTU1, GST19, GSTU1 | glutathione S-tr... 545 2e-154
> AT2G29470.1 | Symbols: ATGSTU3, GST21, GSTU3 | glutathione S-transferase
tau 3 | chr2:12628541-12629543 REVERSE LENGTH=856
Length=856
Score = 1254 bits (679), Expect = 0.0
Identities = 755/792 (95%), Gaps = 4/792 (1%)
Strand=Plus/Plus
Query 1 ATTCAATGGCCGAGAAAGAAGAGGGTGTGAAGCTTATAGGGTCTTGGGCAAGCCCATTCA 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 49 ATTCAATGGCCGAGAAAGAAGAGGGTGTGAAGCTTATAGGGTCTTGGGCAAGCCCATTCA 108
Query 61 GCCGTAGAGTCGAGATGGCTCTCAAACTCAAAGGCGTGCCATACGATTACTTGGACGAAG 120
| ||||||||||||||||||||||| || ||||||||||| |||||||||||||||||||
Sbjct 109 GTCGTAGAGTCGAGATGGCTCTCAAGCTTAAAGGCGTGCCGTACGATTACTTGGACGAAG 168
Query 121 ATTATTTGGTCGTCAAGAGCCCGTTGCTACTTCAACTCAACCCGGTTTACAAAAAAGTCC 180
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 169 ATTATTTGGTTGTCAAGAGCCCGTTGCTACTTCAACTCAACCCGGTTTACAAAAAAGTCC 228
Query 181 CTGTTTTGGTCCACAATGGTAAAATATTACCCGAGTCACAACTGATCCTTGAATACATCG 240
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 229 CTGTTTTGGTTCACAATGGTAAAATATTACCCGAGTCACAACTGATCCTTGAATACATCG 288
Query 241 ACCAAACATGGACGAACAATCCAATTCTACCGCAA-GATCCTTACGACAAAGCCATGGCT 299
||||||||||||| |||||||| |||||||||||| | ||| || |||||||||||||||
Sbjct 289 ACCAAACATGGACAAACAATCCTATTCTACCGCAAAG-TCCATATGACAAAGCCATGGCT 347
Query 300 CGATTTTGGGCCAAATTCGTCGATGAACAAGTCACATTGATAGGGTTCAGGTCTCTAGTG 359
||||| ||||||||||| |||||||||||||||||| |||||||| ||||||| || |||
Sbjct 348 CGATTCTGGGCCAAATTTGTCGATGAACAAGTCACAATGATAGGGCTCAGGTCACTGGTG 407
Query 360 AAATCAGAGAAGAGAATTGATGTTGCAATCGAGGAAGTTCAAGAACTTATTATGTTGCTT 419
|||||||||||||||||||| ||||||||||| |||||||||||||| ||||||||||||
Sbjct 408 AAATCAGAGAAGAGAATTGACGTTGCAATCGAAGAAGTTCAAGAACTAATTATGTTGCTT 467
Query 420 GAGAATCAAATCACGGaaaaaaaaTTATTCGGTGGAGAGACGATAGGATTCTTGGACATG 479
|||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||
Sbjct 468 GAGAATCAAATCACGGGAAAAAAATTATTCGGCGGAGAGACGATAGGATTCTTGGACATG 527
Query 480 GTCGTGGGAAGTATGATACCGTTTTGTCTAGCTCGGGGTTGGGAAGGTATGGGAATTGAT 539
||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||
Sbjct 528 GTCGTGGGAAGTATGATCCCGTTTTGTCTAGCTCGGGCTTGGGAAGGTATGGGAATTGAT 587
Query 540 ATGATTCCAGAGGAAAAGTTTCCAGAACTAAACAGATGGATCAAGAATTTGAAAGAAATT 599
||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 588 ATGATTCCAGAAGAAAAGTTTCCAGAGCTAAACAGATGGATCAAGAATTTGAAAGAAATT 647
Query 600 GAGATCGTAAAGGAATGTATTCCTGACAGAGAGAAACATATTGAGCACATGATGAAAATT 659
|||||||| | |||||| |||||||| |||||||||||||||||||||||||||||||||
Sbjct 648 GAGATCGTGAGGGAATGCATTCCTGATAGAGAGAAACATATTGAGCACATGATGAAAATT 707
Query 660 GTAGGACGAATCAAAGCAG-CTTAAGAGACAACATGATACTCTTTGATCCAGTGATGTTA 718
||||||||||||||||| | || |||||||||||||||||||||||||||||||||||||
Sbjct 708 GTAGGACGAATCAAAGCGGTCT-AAGAGACAACATGATACTCTTTGATCCAGTGATGTTA 766
Query 719 AGTTGTTAACTACATTTGTATTGTCTTGTTATTTAAAAGTTTTATGAACAATTTACTAAA 778
|||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 767 AGTTGTTAACTAAATTTGTATTGTCTTGTTATTTAAAAGTTTTATGAACAATCTACTAAA 826
Query 779 TAAAGAAGAGTG 790
|||||| |||||
Sbjct 827 TAAAGATGAGTG 838
> AT2G29460.1 | Symbols: ATGSTU4, GST22, GSTU4 | glutathione S-transferase
tau 4 | chr2:12626536-12627678 REVERSE LENGTH=906
Length=906
Score = 651 bits (352), Expect = 0.0
Identities = 610/731 (83%), Gaps = 32/731 (4%)
Strand=Plus/Plus
Query 4 CAATGGCCGAGAAAGAAGAGGGTGTGAAGCTTATAGGGTCTTGGGCAAGCCCATTCAGC- 62
||||||| ||||||||||||| |||||||||| |||| | |||||||||||| || | |
Sbjct 77 CAATGGCGGAGAAAGAAGAGGATGTGAAGCTTCTAGGTTTTTGGGCAAGCCCTTTTA-CT 135
Query 63 CGTAGAGTCGAGATGGCTCTCAAACTCAAAGGCGTGCCATACGATTACTTGGACG-AAGA 121
|||||||| ||||||||| |||| |||||||||||||| ||||| |||||||| | ||||
Sbjct 136 CGTAGAGTTGAGATGGCTTTCAAGCTCAAAGGCGTGCCTTACGAGTACTTGGA-GCAAGA 194
Query 122 TTATTTGGTCG-TCAAGAGCCCGTTGCTACTTCA-ACTCAACCCGGTTTACAAAAAAGTC 179
|| | || | ||||||||| ||||| || || | | || ||||||||||| || ||
Sbjct 195 -TA--TAGT-GAACAAGAGCCCTTTGCTTCTCCAGA-TAAATCCGGTTTACAAGAAGGTT 249
Query 180 CCTGTT-TTGGTCCACAATGGTAAAATATTACCCGAGTCACAACTGATCCTTGAATACAT 238
|| ||| || ||| |||| || ||||||||| |||||||||| ||||||| ||||||||
Sbjct 250 CCGGTTCTT-GTCTACAAAGGGAAAATATTATCCGAGTCACATGTGATCCTCGAATACAT 308
Query 239 CGACCAAACATGGACGAACAATCCAATTCTACCGCAAGATCCTTACGACAAAGCCATGGC 298
|||||||| ||||| ||||||||||||||| || |||||||||||||| |||||||||||
Sbjct 309 CGACCAAATATGGAAGAACAATCCAATTCTTCCTCAAGATCCTTACGAGAAAGCCATGGC 368
Query 299 TCGATTTTGGGCCAAATTCGTCGATGAACAAG-T-CA-CATTGATAGGGTTCAGGTCTCT 355
| ||| |||||||| ||||| |||||||| | | | || | ||| || | |||| |
Sbjct 369 TTTATTCTGGGCCAAGTTCGTTGATGAACAGGTTGGACCA--G-TAGCTTTTATGTCTGT 425
Query 356 AGTGAAATCAGAGAAGAGAATTGATGTTGCAATCGAGGAAGTTCAAGAACT-TATTATGT 414
| ||| |||||||| || | || ||||||||| |||| | ||||||||| | ||||||
Sbjct 426 GGCAAAAGCAGAGAAGGGAGTAGAGGTTGCAATCAAGGAGGCTCAAGAACTCT-TTATGT 484
Query 415 TGCTTGAGAATCAAATCAC-GGaaaaaaaaTTATTCGGTGG-AGAGACGATAGGATTCTT 472
| |||||||| || |||| || |||| | || |||||||| | | || || ||||| ||
Sbjct 485 TTCTTGAGAAGGAAGTCACTGG-AAAAGATTTCTTCGGTGGCA-AAACAATTGGATTTTT 542
Query 473 GGACATGGTCGTGGGAAGTATGATACCGTTTTGTCTAGCTCGGGGTTGGGAAGGTATGGG 532
|||| |||||| ||||||||||| ||||||||||| ||||| |||||||||||||||||
Sbjct 543 GGACTTGGTCGCAGGAAGTATGATCCCGTTTTGTCTTGCTCGAGGTTGGGAAGGTATGGG 602
Query 533 AATTGATATGATTCCAGAGGAAAAGTTTCCAGAACTAAACAGATGGATCAAGAATTTGAA 592
||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct 603 AATTGATATGATTCCAGAGGAAAAGTTTCCAGAGCTAAACAGATGGATCAAAAATTTGAA 662
Query 593 AGAAATTGAGATCGTAA-AGGAATGTATTCCTGAC-AGAGAGAAACATATTGAGCACATG 650
||||||||||||||| | || ||||||||||| | |||||| |||| |||||||| |||
Sbjct 663 AGAAATTGAGATCGTGAGAG-AATGTATTCCTC-CTAGAGAGGAACAAATTGAGCATATG 720
Query 651 ATGAAAATTGTAGGACGAATCAAAGCAGCTTAAGAGACAACA-TGATACTCTTTGATCCA 709
| |||| |||||| | |||||||| |||| |||||||||||| |||||||||| |||| |
Sbjct 721 AAGAAAGTTGTAGAAAGAATCAAATCAGCCTAAGAGACAACAATGATACTCTTCGATC-A 779
Query 710 GT-GATGTTAA 719
|| ||||||||
Sbjct 780 GTAGATGTTAA 790
> AT2G29490.1 | Symbols: ATGSTU1, GST19, GSTU1 | glutathione S-transferase
TAU 1 | chr2:12631378-12632473 REVERSE LENGTH=1003
Length=1003
Score = 545 bits (295), Expect = 2e-154
Identities = 554/677 (82%), Gaps = 25/677 (4%)
Strand=Plus/Plus
Query 5 AATGGCCGAGAAAGAAGAGGGTGTGAAGCTTATAGGGTCTTGGGCAAGCCCATTCAGCCG 64
|||||| |||||||||||| ||||||||||| |||||| |||||||||||| || || ||
Sbjct 113 AATGGCGGAGAAAGAAGAGAGTGTGAAGCTTCTAGGGTTTTGGGCAAGCCCTTTTAGTCG 172
Query 65 TAGAGTCGAGATGGCTCTCAAACTCAAAGGCGTGCCATACGATTACTTGGACGAAGATTA 124
| |||||||||||||||||||||||||||||||||||||||| |||||||| |||||||
Sbjct 173 TCGAGTCGAGATGGCTCTCAAACTCAAAGGCGTGCCATACGAATACTTGGAAGAAGATT- 231
Query 125 TTTGGTCGTCAAGAGCCCGTTGCTACTTCAACTCAACCCGGTTTACAAAAAAGTCCCTGT 184
| | | ||||| ||| ||||| || | || |||||| || |||| ||||| || ||
Sbjct 232 T--GCCCAACAAGACCCCTTTGCTTCTGGAGCTAAACCCGCTTCACAAGAAAGTTCCGGT 289
Query 185 T-TTGGTCCACAATGGTAAAATATTACCCGAGTCACAACTGATCCTTGAATACATCGACC 243
| ||| ||||||||| |||||||||| ||||||||| ||||| || ||||||||||| |
Sbjct 290 TCTTG-TCCACAATGACAAAATATTACTCGAGTCACATCTGATTCTCGAATACATCGATC 348
Query 244 AAACATGGACGAACAATCCAATTCTACCGCAAGATCCTTACGACAAAGCCATGGCTCGAT 303
| || |||| ||||| ||||||||| || |||||||||||||| || |||||||||||||
Sbjct 349 AGACGTGGAAGAACAGTCCAATTCTTCCTCAAGATCCTTACGAGAAGGCCATGGCTCGAT 408
Query 304 TTTGGGCCAAATTCGTCGATGAACA-AGTCAC-ATTGA-TAGGGTTCAGGTCTCTAGTGA 360
|||||||||| ||| ||||||| || | || | | | ||||||| ||||| || || |
Sbjct 409 TTTGGGCCAAGTTCATCGATGACCAGA-TC-CTAAC-ACTAGGGTTTAGGTCCCTTGTAA 465
Query 361 AATCAGAGAAGAG-AATTGATGTTGCAATCGAGGA-AGTTCAAGAACTTATTATGTTGCT 418
|| ||||||| || || || ||||| || || || | | | ||||| ||||||| ||
Sbjct 466 AAGCAGAGAA-AGGAAGAGAGGTTGCTATTGAAGAGACT-CGGGAACTGCTTATGTTTCT 523
Query 419 TGAGAATCAAATCAC-GGaaaaaaaaTTATTCGGTGG-AGAGACGATAGGATTCTTGGAC 476
|||||| || |||| |||||| | || |||||||| | |||| || ||||||||||||
Sbjct 524 TGAGAAAGAAGTCACTGGAAAAGAT-TTCTTCGGTGGCA-AGACAATCGGATTCTTGGAC 581
Query 477 ATGGTCGTGGGAAGTATGATACCGTTTTGTCTAGCTCGGGGTTGGGAAGGTATGGGAATT 536
||| ||| ||||||||||| || |||||||||||| | |||| ||||||| ||||||
Sbjct 582 ATGATCGCAGGAAGTATGATCCCATTTTGTCTAGCTAGACTTTGGAAAGGTATTGGAATT 641
Query 537 GATATGATTCCAGAGGAAAAGTTTCCAGAACTAAACAGATGGATCAAGAATTTGAAAGAA 596
||||||||||||||||| |||||||| ||| |||| |||||||||||||||||| |||||
Sbjct 642 GATATGATTCCAGAGGAGAAGTTTCCGGAATTAAATAGATGGATCAAGAATTTGGAAGAA 701
Query 597 ATTGAGATC-GTAAAGGAATGTATTCCTGACA-GAGAGAAACATATTGAGCACATGATGA 654
||||| | || | || |||||||||| || |||||||||| ||||||| ||||| |
Sbjct 702 GTTGAGG-CAGTGAGGGGATGTATTCCTC-CAAGAGAGAAACAAATTGAGCGCATGACCA 759
Query 655 AAATTGTAG-GACGAAT 670
|||||| || ||| |||
Sbjct 760 AAATTGCAGAGAC-AAT 775
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 38429122455
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5