BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg481885
Length=2078
Score E
Sequences producing significant alignments: (Bits) Value
AT2G29690.1 | Symbols: ASA2, ATHANSYNAB | anthranilate synthase... 3193 0.0
> AT2G29690.1 | Symbols: ASA2, ATHANSYNAB | anthranilate synthase
2 | chr2:12693871-12696975 FORWARD LENGTH=2078
Length=2078
Score = 3193 bits (1729), Expect = 0.0
Identities = 1973/2089 (94%), Gaps = 24/2089 (1%)
Strand=Plus/Plus
Query 1 AAGACTTAAAATCAACGAGCTCACGGGGATGTCGGCCGTTTCAATCTCCGCCGTCAAATC 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 AAGACTTAAAATCAACGAGCTCACGGGGATGTCGGCCGTTTCAATCTCCGCCGTCAAATC 60
Query 61 TGATTTTTCCACCGTCGAGGCCATAGCCGTTACACACCATCGGACGCCG---CCGCCACA 117
|||||||| ||||||||| |||||||||||||||||||||||||||||| || |||||
Sbjct 61 TGATTTTTTCACCGTCGAAGCCATAGCCGTTACACACCATCGGACGCCGCATCCACCACA 120
Query 118 TTTTCCTTCGCTCCGGTTTCCACTATCGTTCAAGTCCCCGCCGGTTACTTCTCTTAACCT 177
||| |||||||||||||||||||||||| ||||||||||||||| |||||||||||||||
Sbjct 121 TTTCCCTTCGCTCCGGTTTCCACTATCGCTCAAGTCCCCGCCGGCTACTTCTCTTAACCT 180
Query 178 TGACAG-TGGATCAAAACTCCTCCACGTCT--CG-CGTCTTCCTTCTATCAAATGCTCAT 233
|| | ||||||||||||||||||| ||| || ||||||||||||||||||||
Sbjct 181 TG-TGGCTGGATCAAAACTCCTCCACTTCTCGCGTCGTCTTCCTTCTATCAAATG----- 234
Query 234 CTTCTTCATATACTCCGTCGTTAGATTTATCGGAGGAACAGTTCACAAAATTTAAACAAG 293
| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 235 ---C-TCATATACTCCGTCGTTAGATTTATCGGAGGAACAGTTCACAAAATTTAAAAAAG 290
Query 294 CATCGGAAAAGGGAAACTTAGTTCCTCTATACCGATGTGTATTCTCGGATCATTTGACTC 353
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 291 CATCGGAAAAGGGAAACTTAGTTCCTCTATTCCGATGTGTATTCTCGGATCATTTGACTC 350
Query 354 CGATACTTGCTTACCGATGTTTGGTGAAAGAAGACGATAGAGATGCTCCTAGCTTCTTGT 413
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 351 CGATACTTGCTTACCGATGTTTGGTGAAAGAAGATGATAGAGATGCTCCTAGCTTCTTGT 410
Query 414 TTGAGTCAGTGGAGCCTGGTTTGCAATCCTCCAACATCGGGAGGTTTAGTGTAGTTGGAG 473
| ||||| ||||||||||||| |||||| ||||||||||| |||| ||||||||||||||
Sbjct 411 TCGAGTCTGTGGAGCCTGGTTCGCAATCGTCCAACATCGGTAGGTATAGTGTAGTTGGAG 470
Query 474 CTCAGCCCACAATAGAAATCGTGGCAAAGGGAAATGTAGTTACTGTGATGGACCATGGAG 533
||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 471 CTCAGCCTACAATAGAAATCGTTGCAAAGGGAAATGTAGTTACTGTGATGGACCATGGAG 530
Query 534 CTGGTCTTAGGACTGAGGAGGAAGTGGATGATCCAATGATGGTTCCTCAGAAAATCATGG 593
|| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 531 CTAGTCTTAGGACAGAGGAGGAAGTGGATGATCCAATGATGGTTCCTCAGAAAATCATGG 590
Query 594 ATGAATGGAAACCACAACGCATTGATGAATTGCCTGAAGCTTTCTGCGGTGGTTGGGTTG 653
| |||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 591 AGGAATGGAATCCACAAGGCATTGATGAATTGCCTGAAGCTTTCTGCGGTGGTTGGGTTG 650
Query 654 GATACTTCTCATATGACACTGTACGTTATGTTGAGAAGAAGAAGCTGCCATTTTCAAATG 713
||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct 651 GATACTTTTCATATGACACTGTACGTTATGTTGAGAAGAAGAAGCTGCCTTTTTCTAATG 710
Query 714 CTCCAGAGGATGATAGGAGTCTTCCTGATGTTCATTTGGGTCTTTATGATGATGTGATCG 773
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 711 CTCCAGAGGATGATAGGAGTCTTCCTGATGTTAATTTGGGTCTTTATGATGATGTGATCG 770
Query 774 TGTTTGATCATGTCGAGAAGAAAGCATATGTGATCCACTGGGTGCGGATAGATAAGGATC 833
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 771 TGTTTGATCATGTTGAGAAGAAAGCATATGTGATCCACTGGGTGCGGATAGATAAGGATC 830
Query 834 GTTCTGTTGAAGATAATTTTAC-TGATGGAATGAATCAGTTGGAATCTCTAACCTCTAGA 892
||||||||||||| || ||| | ||| |||||||||| ||||||||||||||||||||||
Sbjct 831 GTTCTGTTGAAGA-AAATTTCCGTGAAGGAATGAATCGGTTGGAATCTCTAACCTCTAGA 889
Query 893 ATTCAAGACCAAAAACCCCCCAAGATGCCTACTGGTTTCATAAAACTACGCACTCAGCTC 952
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 890 ATTCAAGACCAAAAACCCCCCAAGATGCCTACTGGTTTCATAAAACTACGCACTCAGCTC 949
Query 953 TTCGGTCCTAAATTGGAGAAATCAACTATGACGAGTGAGGCGTACAAGGAGGCAGTGGTG 1012
|||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 950 TTCGGTCCGAAATTGGAGAAATCAACTATGACGAGTGAGGCATACAAGGAGGCAGTGGTG 1009
Query 1013 GAAGCCAAAGAACATATCTTGGCTGGGGACATCTTTCAGATAGTTCTTAGTCAGAGATTT 1072
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1010 GAAGCCAAAGAACATATCTTGGCTGGGGACATCTTTCAGATAGTTCTTAGTCAGAGATTT 1069
Query 1073 GAAAGGCGGACATTTGCGGACCCATTTGAGATATATAGAGCTCTTAGGATTGTAAATCCA 1132
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1070 GAAAGGCGGACATTTGCGGACCCATTTGAGATATATAGAGCTCTTAGGATTGTAAATCCA 1129
Query 1133 AGTCCGTACATGGCCTATTTACAGGCTAGAGGATGCATATTAGTTGCTTCAAGTCCAGAA 1192
||||| |||||||||||||| |||| ||||||||||||||||||||| |||||||||||
Sbjct 1130 AGTCCCTACATGGCCTATTTGCAGGTTAGAGGATGCATATTAGTTGCATCAAGTCCAGAG 1189
Query 1193 ATATTGTTACGTTCAAAAAATAGGAAAATTACCAATCGCCCCCTTGCTGGAACTGTCAGA 1252
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1190 ATATTGTTACGTTCAAAAAATAGGAAAATTACCAATCGCCCCCTTGCTGGAACTGTCAGA 1249
Query 1253 AGAGGAAAGACACCCAAAGAAGATCTAATGCTGGAAAAAGAGCTCTTAAGTGATGAAAAA 1312
||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1250 AGAGGGAAGACACCCAAAGAAGATCTAATGCTGGAAAAAGAGCTCTTAAGCGATGAAAAA 1309
Query 1313 CAATGCGCAGAGCATATTATGCTTGTTGATTTGGGAAGGAACGATGTTGGCAAGGTTTCA 1372
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1310 CAATGCGCAGAACATATTATGCTTGTTGATTTGGGAAGGAACGATGTTGGCAAGGTTTCA 1369
Query 1373 AAGCCCGGTTCTGTGGAGGTTGAGAAGCTCATGAATATAGAACGGTATTCACATGTCATG 1432
||||| |||||||||||||| ||||||||| | |||||||| ||| |||||||||||||
Sbjct 1370 AAGCCTGGTTCTGTGGAGGTCAAGAAGCTCAAGGATATAGAATGGTTTTCACATGTCATG 1429
Query 1433 CACATTAGCTCCACGGT-GACAGGCGAATTACTAGATAATCTAACAAGCTGGGACGCTCT 1491
||||||||||||||||| | ||| ||||| || ||| ||||||||||||||||||||||
Sbjct 1430 CACATTAGCTCCACGGTAGT-AGGTGAATTGCTCGATCATCTAACAAGCTGGGACGCTCT 1488
Query 1492 TCGAGCTGCACTTCCCGTTGGAACCGTCAGCGGAGCCCCAAAGGTAAAAGCCATGGAGCT 1551
| |||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1489 TAGAGCTGTACTTCCCGTTGGAACCGTGAGCGGAGCCCCAAAGGTAAAAGCCATGGAGCT 1548
Query 1552 GATAGATGAACTTGAAGTAACAAGGCGTGGTCCTTACAGTGGAGGCTTTGGAGGCATTTC 1611
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1549 GATAGATGAACTTGAAGTAACAAGGCGTGGTCCTTACAGTGGAGGCTTTGGAGGCATTTC 1608
Query 1612 CTTTAACGGAGACATGGACATTGCCTTGGCTCTTAGAACAATGGTCTTCCCAACAAATAC 1671
||||| |||||||||||||||||||| ||||| ||||||||||||||||||||||||||
Sbjct 1609 GTTTAATGGAGACATGGACATTGCCTTAGCTCTCAGAACAATGGTCTTCCCAACAAATAC 1668
Query 1672 CCGTTATGACACATTGTACTCTTACAAGCATCCTCAGAGACGTCGAGAGTGGATTGCTCA 1731
||||||||||||||||||||| ||||||||||||||||||||| |||| |||||||||||
Sbjct 1669 CCGTTATGACACATTGTACTCATACAAGCATCCTCAGAGACGTAGAGAATGGATTGCTCA 1728
Query 1732 TATTCAGGCTGGAGCTGGGGTTGTTGCAGACAGTAACCCTGATGATGAACACAGAGAGTG 1791
|||||| |||||||||||| ||||||||||||||||||||||||||||||| ||||||||
Sbjct 1729 TATTCAAGCTGGAGCTGGGATTGTTGCAGACAGTAACCCTGATGATGAACATAGAGAGTG 1788
Query 1792 TGAGAACAAAGCAGCAGCTCTAGCCCGAGCCATTGATCTTGCAGAGTCCTCCTTTCTCGA 1851
||||||||||||||| ||| ||||||||||||| |||||||| |||||||||||||| ||
Sbjct 1789 TGAGAACAAAGCAGCGGCTTTAGCCCGAGCCATCGATCTTGCTGAGTCCTCCTTTCTTGA 1848
Query 1852 GATACCTGAGGTTACTACTATCACACCTCACATCAACAATATCTGAGCATAAGCTTTCTT 1911
| ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1849 GGCACCTGAGTTTACTACTATCACACCTCACATCAACAATATCTGAGCATAAGCATTCTT 1908
Query 1912 GT-TTTCTTTACTTTTGGTTCCAGTATTACTCACTC-AGATAGCTGTTTGATTTGCGAGA 1969
| |||||||||||||| || ||| ||||||||||| | |||||||||||||||||||||
Sbjct 1909 -TATTTCTTTACTTTTGCTTTCAGCATTACTCACTCCACATAGCTGTTTGATTTGCGAGA 1967
Query 1970 ATGGCTCTTTTGAGTATTAGAATTTAGGACTTGTGTCCGAGATTTAAGGTCTGTGGGACC 2029
|||||||||| ||| |||||||||||||||| |||||||| ||| |||||||| |||||
Sbjct 1968 TTGGCTCTTTTAAGTTTTAGAATTTAGGACTTCTGTCCGAGGTTTGAGGTCTGTCGGACC 2027
Query 2030 AAAAGTTGCTAGCAAATATTTACAAATAATGTCATATGATCGATCATAC 2078
|||| ||| ||||||||||||||||||||| ||||||||||||||||||
Sbjct 2028 AAAATTTGGTAGCAAATATTTACAAATAATATCATATGATCGATCATAC 2076
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 103011518340
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5