BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg481893
Length=1616
Score E
Sequences producing significant alignments: (Bits) Value
AT2G29740.1 | Symbols: UGT71C2 | UDP-glucosyl transferase 71C2 ... 2202 0.0
AT2G29750.1 | Symbols: UGT71C1 | UDP-glucosyl transferase 71C1 ... 1352 0.0
> AT2G29740.1 | Symbols: UGT71C2 | UDP-glucosyl transferase 71C2
| chr2:12706710-12708367 FORWARD LENGTH=1658
Length=1658
Score = 2202 bits (1192), Expect = 0.0
Identities = 1375/1464 (94%), Gaps = 10/1464 (1%)
Strand=Plus/Plus
Query 1 AAAAATCGCCAGAAGAATGGAGGAGAAGCAAGAAGCAGAGCTCATATTCATCCCATTTCC 60
|||||||||| ||||||||| | || ||||||||||||||||||| ||||||||||||||
Sbjct 22 AAAAATCGCCGGAAGAATGGCGAAGCAGCAAGAAGCAGAGCTCATCTTCATCCCATTTCC 81
Query 61 AATCCCTGGACACATGCTTGCCACAATCGAACTCGCGAAACGTCTCATCAATCACAAACC 120
|||||| |||||||| || ||||||||||||||||||||||||||||||| |||| ||||
Sbjct 82 AATCCCCGGACACATTCTCGCCACAATCGAACTCGCGAAACGTCTCATCAGTCACCAACC 141
Query 121 TCGTCGGATCCATACCATCACCATCCTCCATTGGAGCTTACCTTTTCTTCCTCAATCTGA 180
| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 142 TAGTCGGATCCACACCATCACCATCCTCCATTGGAGCTTACCTTTTCTTCCTCAATCTGA 201
Query 181 CACTATCTCCTTCCTCAAATCCCTAATCCAAACAGAGTCTCGTATCCGTCTTGTTACCTT 240
||||||| |||||||||||||||||||| |||||||||||||||||||||| |||||||
Sbjct 202 CACTATCGCCTTCCTCAAATCCCTAATCGAAACAGAGTCTCGTATCCGTCTCATTACCTT 261
Query 241 ACCCGACGTCCCAAACCCTCCACCAATGGAACT-TTTCGTGAAAGCTTCAGAATCTTACA 299
|||||| |||| |||||||||||||||||| || ||| ||||||||||| ||||||||||
Sbjct 262 ACCCGATGTCCAAAACCCTCCACCAATGGAGCTATTT-GTGAAAGCTTCCGAATCTTACA 320
Query 300 TTCTTGAATTCGTCAAGAAAATGGTTCCTTTGGTTAAAAAAGCTCTCTCCACTCTCTTGT 359
||||||||| |||||||||||||||||||||||| | ||| |||||||||||||||||||
Sbjct 321 TTCTTGAATACGTCAAGAAAATGGTTCCTTTGGTCAGAAACGCTCTCTCCACTCTCTTGT 380
Query 360 CTTCTCGTGATGAATCGGATTCAGTTCGTGTCGCCGGATTAGTTCTCGATTTCTTCTGTG 419
||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||
Sbjct 381 CTTCTCGTGATGAATCGGATTCAGTTCATGTCGCCGGATTAGTTCTTGATTTCTTCTGTG 440
Query 420 TCCCTTTGATTGATGTTGGAAACGAGTTTAATCTCCCTTCTTACATTTTCTTGACGTGTA 479
|||||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||
Sbjct 441 TCCCTTTGATCGATGTCGGAAACGAGTTTAATCTCCCTTCTTACATCTTCTTGACGTGTA 500
Query 480 GCGCAAGTTTCTTGGGTATGATGAAGTATCTCCCAGAGAGACACCGCAAAATCAAACCGG 539
||||||||||||||||||||||||||||||| | |||||| ||||| ||| ||||||||
Sbjct 501 GCGCAAGTTTCTTGGGTATGATGAAGTATCTTCTGGAGAGAAACCGCGAAACCAAACCGG 560
Query 540 AATTTAACCGGAGCTCTGGCGAGGAAACAATACCGGTTCCTGGCTTTGTTAACTCCGTTC 599
|| ||||||||||||||| ||||||||||||| | |||||||| ||||||||||||||||
Sbjct 561 AACTTAACCGGAGCTCTGACGAGGAAACAATATCAGTTCCTGGTTTTGTTAACTCCGTTC 620
Query 600 CGGTTAAGGTTTTGCCACCGGGTCTGTTCATGAGAGAGTCTTACGAAGCTTGGGTCGAAA 659
||||||| ||||||||||||||| |||||| || |||||||||||||||||||||||||
Sbjct 621 CGGTTAAAGTTTTGCCACCGGGTTTGTTCACGACTGAGTCTTACGAAGCTTGGGTCGAAA 680
Query 660 TGGCGGAGAGGTTCCCTGAAGCCAAGGGTATCTTGGTAAATTC-TTTCGAATCTCTAGAA 718
||||||| ||||||||||||||||||||||| ||||| ||||| ||| ||||||||||||
Sbjct 681 TGGCGGAAAGGTTCCCTGAAGCCAAGGGTATTTTGGTCAATTCATTT-GAATCTCTAGAA 739
Query 719 CGTAACGCTTTTGATTATTTCGATCATCGTCCGGATAATTACCCACCCGTTTACCCAATC 778
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 740 CGTAACGCTTTTGATTATTTCGATCGTCGTCCGGATAATTACCCACCCGTTTACCCAATC 799
Query 779 GGGCCGATTCTATGCTCCAACGATCGTCCGAATTTGGATTTATCGGAACAAGATCGGATC 838
||||| ||||||||||||||||||||||||||||||||||||||||||| ||| ||||||
Sbjct 800 GGGCCAATTCTATGCTCCAACGATCGTCCGAATTTGGATTTATCGGAACGAGACCGGATC 859
Query 839 TTGAGATGGCTCGATGACCAACCCGAGTCATCAGTTGTG-TTCTTCTGCTTCGGGAGCTT 897
|||| ||||||||||||||||||||||||||| |||||| ||| ||||||||||||||||
Sbjct 860 TTGAAATGGCTCGATGACCAACCCGAGTCATCTGTTGTGTTTC-TCTGCTTCGGGAGCTT 918
Query 898 GAAGAGTCTCGCTGCTTCTCAGATTAAAGAGATCGCTCAAGCCATT-GAGCTCGTCGGAT 956
||||||||||||||| ||||||||||||||||||||||||||| || ||||||||||||
Sbjct 919 GAAGAGTCTCGCTGCGTCTCAGATTAAAGAGATCGCTCAAGCC-TTAGAGCTCGTCGGAA 977
Query 957 TCAGATTCCTCTGGTCGATTCGAACAGATCCGAACGAGTACCCGAACCCGTACGAGATTT 1016
||||||||||||||||||||||||| || ||||| |||||| ||| |||| |||||||||
Sbjct 978 TCAGATTCCTCTGGTCGATTCGAACGGACCCGAAGGAGTACGCGAGCCCGAACGAGATTT 1037
Query 1017 TACCGGACGGGTTTATGAACCGGGTCATGGGTTTAGGTCTTGTTTGTGGTTGGGCTCCTC 1076
|||||||||||||||||||||| ||||||||||| || ||||||||||||||||||||||
Sbjct 1038 TACCGGACGGGTTTATGAACCGAGTCATGGGTTTGGGCCTTGTTTGTGGTTGGGCTCCTC 1097
Query 1077 AAGTGGAAATTCTGGCCCATAAAGCAATCGGAGGGTTCGTGTCACACTGCGGTTGGAACT 1136
|||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1098 AAGTTGAAATTCTGGCCCATAAAGCAATTGGAGGGTTCGTGTCACACTGCGGTTGGAACT 1157
Query 1137 CGATTTTGGAGAGTTTGCGTTTCGGGGTTCCAATCGCCACGTGGCCAATGTACGCAGAAC 1196
|||| |||||||||||||||||||| |||||||| |||||||||||||||||||| ||||
Sbjct 1158 CGATATTGGAGAGTTTGCGTTTCGGAGTTCCAATTGCCACGTGGCCAATGTACGCGGAAC 1217
Query 1197 AACAACTAAACGCGTTCACGATTGTGAAGGAGCTTGGTTTGGCGTTGGAGATGCGGTTGG 1256
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1218 AACAACTAAACGCGTTCACGATTGTGAAGGAGCTTGGTTTGGCGTTGGAGATGCGGTTGG 1277
Query 1257 ATTACGTGTGGGC-TCATGGAGAAATCGTGAAAGCTGATGAAATCGCAGGTGCCGTACGA 1315
||||||||| || | |||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1278 ATTACGTGTCGGAAT-ATGGAGAAATCGTGAAAGCTGATGAAATCGCAGGAGCCGTACGA 1336
Query 1316 TCTTTAATGGACGGTGAGGATGTGCGGAGGAGGAAACTGAAGGAGATTGCGGAGGCGGCA 1375
||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| |
Sbjct 1337 TCTTTGATGGACGGTGAGGATGTGCCGAGGAGGAAACTGAAGGAGATTGCGGAGGCGGGA 1396
Query 1376 AAAGAGGCTGTGATGGACGGTGGATCTTCGTTTGTTGCGGTTAAAAGATTCATAGATGGG 1435
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1397 AAAGAGGCTGTGATGGACGGTGGATCTTCGTTTGTTGCGGTTAAAAGATTCATAGATGGG 1456
Query 1436 CTTTGACCGGTGATGGTTTTTAAA 1459
|||||| ||||||||| |||||||
Sbjct 1457 CTTTGATCGGTGATGGGTTTTAAA 1480
Score = 63.9 bits (34), Expect = 5e-09
Identities = 43/47 (91%), Gaps = 2/47 (4%)
Strand=Plus/Plus
Query 1570 TGTTCACTCATTTG-T-TGTATCTAAATAGCTCATTTTGCATTTTGT 1614
|||| ||||||||| | | ||||||||||||||||||||||||||||
Sbjct 1607 TGTTTACTCATTTGTTATATATCTAAATAGCTCATTTTGCATTTTGT 1653
> AT2G29750.1 | Symbols: UGT71C1 | UDP-glucosyl transferase 71C1
| chr2:12709727-12711696 FORWARD LENGTH=1970
Length=1970
Score = 1352 bits (732), Expect = 0.0
Identities = 1210/1436 (84%), Gaps = 51/1436 (4%)
Strand=Plus/Plus
Query 17 ATGGAGG-AG-AAGCAAGAAGCAGAGCTCAT-ATTCATCCCATTT-CCAATC-CCTGGAC 71
|||| || || ||| |||| ||||||||| | | |||| || ||| || || || ||||
Sbjct 176 ATGG-GGAAGCAAG-AAGATGCAGAGCTCGTCA-TCATACC-TTTCCCTTTCTCC-GGAC 230
Query 72 ACATGCTTGCCACAATCGAACTCGCGAAACGTCTCATCAA-TCACAAAC-CTCGTCGGAT 129
|||| || || |||||||||||||| ||||||||||| || ||| | || || ||||||
Sbjct 231 ACATTCTCGCAACAATCGAACTCGCCAAACGTCTCAT-AAGTCA-AGACAATCCTCGGAT 288
Query 130 CCATACCATCACCATCCTCCATTGGAGCTTACCTTTTCTTCCTCAATCTGACACTATCTC 189
||| ||||||||||||||| ||||| | ||||||||| |||||||| ||||||| ||| |
Sbjct 289 CCACACCATCACCATCCTCTATTGGGGATTACCTTTTATTCCTCAAGCTGACACAATCGC 348
Query 190 CTTCCTCAAATCCCTAATCCAAACA-GAGTCTCGTATCCGTCTTGTTACCTTACCCGACG 248
|||||| ||||||| | |||| | ||| ||||||||||||| ||||| || ||||| |
Sbjct 349 TTTCCTCCGATCCCTAGT-CAAAAATGAGCCTCGTATCCGTCTCGTTACGTTGCCCGAAG 407
Query 249 TCCCAA-ACCCTCCACCAATGGAACT-TTTCGTGAAAGCTT-CAGAATCTTACATTCTTG 305
| |||| ||||||||||||||||||| ||| ||| || || | ||||||||||||||||
Sbjct 408 T-CCAAGACCCTCCACCAATGGAACTCTTT-GTGGAA-TTTGCCGAATCTTACATTCTTG 464
Query 306 AATTCGTCAAGAAAATGGTTCCTTTGGTTAAAAAAGCTCTCTCCACTCTCTTGTCTTCTC 365
||| |||||||||||||||||| | | | | ||||||||||||||||||||||||| |
Sbjct 465 AATACGTCAAGAAAATGGTTCCCATCATCAGAGAAGCTCTCTCCACTCTCTTGTCTTCCC 524
Query 366 GTGATGAATCGGATTCAGTTCGTGTCGCCGGATTAGTTCTCGATTTCTTCTGTGTCCCTT 425
| |||||||||| |||||||||||| || ||||| ||||| || |||||||| ||||||
Sbjct 525 GCGATGAATCGGGTTCAGTTCGTGTGGCTGGATTGGTTCTTGACTTCTTCTGCGTCCCTA 584
Query 426 TGATTGATGTTGGAAACGAGTTTAATCTCCCTTCTTACATTTTCTTGACGTGTAGCGCAA 485
|||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 585 TGATCGATGTAGGAAACGAGTTTAATCTCCCTTCTTACATTTTCTTGACGTGTAGCGCAG 644
Query 486 GTTTCTTGGGTATGATGAAGTATCTCCCAGAGAGACACCGCAAAATCAAACCGGAATTTA 545
| ||||||||||||||||||||||| ||||||||||||||| |||||||| ||||||| |
Sbjct 645 GGTTCTTGGGTATGATGAAGTATCTTCCAGAGAGACACCGCGAAATCAAATCGGAATTCA 704
Query 546 ACCGGAGCT-CTGGCGAGGAAAC-AATAC-CGGTTCCTGGCTT-TGTTAACTCCGTTCCG 601
||||||||| | |||||| ||| | | ||||||| || ||| ||||| |||||
Sbjct 705 ACCGGAGCTTCAA-CGAGGAGTTGAAT-CTCA-TTCCTGG-TTATGTCAACTCTGTTCCT 760
Query 602 GTTAAGGTTTTGCCACCGGGTCTGTTCATGAGAGAGTCTTACGAAGC-TTGGGTCGAAAT 660
|||||||||||| | ||||| ||||||| |||| | ||||| || |||||||||| |
Sbjct 761 ACTAAGGTTTTGCCGTCAGGTCTATTCATGAAAGAGACCTACGA-GCCTTGGGTCGAACT 819
Query 661 GGCGGAGAGGTTCCCTGAAGCCAAGGGTATCTTGGTAAATTCTTTCGA-ATCTCTAGAAC 719
|| |||||||| |||||||| |||||||| ||||| ||||| | | | | |||| || |
Sbjct 820 AGCAGAGAGGTTTCCTGAAGCTAAGGGTATTTTGGTTAATTCATAC-ACAGCTCTCGAGC 878
Query 720 GTAACGCTTTTGATTATTTCGATCATCGTCCGGATAATTACCCACCCGTTTACCCAATCG 779
|||| |||| | |||||||||| | |||||||||| |||||| || ||||||||||||
Sbjct 879 CAAACGGTTTTAAATATTTCGATCGTTGTCCGGATAACTACCCAACCATTTACCCAATCG 938
Query 780 GGCCGAT-TCTATGCTCCAACGATCGTCCGAATTTGGATTTATCGGAACAAGATCGGATC 838
||||||| | ||||||||||||| |||||||||||||| | |||||||| ||||||||||
Sbjct 939 GGCCGATAT-TATGCTCCAACGACCGTCCGAATTTGGACTCATCGGAACGAGATCGGATC 997
Query 839 TTGAGATGGCTCGATGACCAACCCGAGTCATCAGTTGTGTTCTTCTGCTTCGGGAGCTTG 898
| | ||||| |||||||||||||||||||| || |||||| |||| ||||||||||||
Sbjct 998 ATAACTTGGCTAGATGACCAACCCGAGTCATCGGTCGTGTTCCTCTGTTTCGGGAGCTTG 1057
Query 899 AAGAGTCTC-GCTGCTTCTCAGATTAAAGAGATCGCTCAAGCCATT-GAGCTCGTCGGAT 956
|||| |||| || ||| ||||||| || ||||| ||||||||| || ||| |||| | |
Sbjct 1058 AAGAATCTCAGC-GCTACTCAGATCAACGAGATAGCTCAAGCC-TTAGAGATCGTTG-AC 1114
Query 957 T-CAGATTCCTCTGGTCGATTCGAAC-AGATCCGAACGAGTACCCGAACCCGTACGAGAT 1014
| || |||| |||||||| ||||||| | | ||||| |||||| ||| ||| ||||||
Sbjct 1115 TGCAAATTCATCTGGTCGTTTCGAACCA-ACCCGAAGGAGTACGCGAGCCCTTACGAGGC 1173
Query 1015 TTTACCGGACGGGTTTATGAACCGGGTCATGGGTTTAGGTC-TTGTTTGTGGTTGGGCTC 1073
| |||| ||||||| ||| |||||||||||| | ||| | ||||||||||||||||||
Sbjct 1174 TCTACCACACGGGTTCATGGACCGGGTCATGGATCAAGG-CATTGTTTGTGGTTGGGCTC 1232
Query 1074 CTCAAGTGGAAATTCTGGCCCATAAAGCAATCGGAGGGTTCGTGTCACACTGCGGTTGGA 1133
||||||| ||||| || ||||||||||| | ||||| ||||| || || || |||||||
Sbjct 1233 CTCAAGTTGAAATCCTAGCCCATAAAGCTGTGGGAGGATTCGTATCTCATTGTGGTTGGA 1292
Query 1134 ACTCGATTTTGGAGAGTTTGCGTTTCGGGGTTCCAATCGCCACGTGGCCAATGTACGCAG 1193
||||||| |||||||||||| ||||||| |||||||||||||||||||| |||||||| |
Sbjct 1293 ACTCGATATTGGAGAGTTTGGGTTTCGGCGTTCCAATCGCCACGTGGCCGATGTACGCGG 1352
Query 1194 AACAACAACTAAACGCGTTCACGATTGTGAAGGAGCTTGGTTTGGCGTTGGAGATGCGGT 1253
||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||||
Sbjct 1353 AACAACAACTAAACGCGTTCACGATGGTGAAGGAGCTTGGTTTAGCCTTGGAGATGCGGT 1412
Query 1254 TGGATTACGTGTGGGCTCATGGAGAAATCGTGAAAGCTGATGAAATCGCAGGTGCCGT-A 1312
|||||||||||| || ||||||| || |||||||||||||| |||||||| |||| |
Sbjct 1413 TGGATTACGTGTCGGAAGATGGAGATATAGTGAAAGCTGATGAGATCGCAGGAACCGTTA 1472
Query 1313 CGATCTTTAATGGACGGTGAGGATGTGCGGAGGAGGAAACTGAAGGAGATTGCGGAGGCG 1372
|||||||||||||||||| |||||||| || ||| ||| ||||||||||||| ||||||
Sbjct 1473 -GATCTTTAATGGACGGTGTGGATGTGCCGAAGAGTAAAGTGAAGGAGATTGCTGAGGCG 1531
Query 1373 GCAAAAGAGGCTGTGATGGACGGTGGATCTTCGTTTGTTGCGGTTAAAAGATTCAT 1428
| |||||| |||||| | ||||||||||||||||| |||||||||||||||||||
Sbjct 1532 GGAAAAGAAGCTGTG--G-ACGGTGGATCTTCGTTTCTTGCGGTTAAAAGATTCAT 1584
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 79818866550
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5