BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg481897
Length=1435
Score E
Sequences producing significant alignments: (Bits) Value
AT2G29780.1 | Symbols: | Galactose oxidase/kelch repeat superf... 1748 0.0
AT2G29770.1 | Symbols: | Galactose oxidase/kelch repeat superf... 621 5e-177
AT2G29600.1 | Symbols: | Galactose oxidase/kelch repeat superf... 183 3e-45
AT2G29800.1 | Symbols: | Galactose oxidase/kelch repeat superf... 121 2e-26
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-l... 67.6 3e-10
AT2G21680.1 | Symbols: | Galactose oxidase/kelch repeat superf... 63.9 4e-09
> AT2G29780.1 | Symbols: | Galactose oxidase/kelch repeat superfamily
protein | chr2:12717786-12719328 REVERSE LENGTH=1467
Length=1467
Score = 1748 bits (946), Expect = 0.0
Identities = 1314/1482 (89%), Gaps = 63/1482 (4%)
Strand=Plus/Plus
Query 1 ATGGCTATAATCTCTGAAACTTCCGACGACGGCTCTAACGGTGGCGTACCAAACAAGAAA 60
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1 ATGGCTATAATCTCTGAAACTTCCGACGACGGCTCTCACGGTGGCGTACCAAACAAGAAA 60
Query 61 TCCGAAGAACTCCACAAGAACCCTAAAGAAGACGATCATCAAGAAGAAGAAGCAGAGAAT 120
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 61 CCCGAAGAACTCCACAAGAACCCTAAAGAAGACGATCATCAAGAAGAAGAAGTAGAGAAT 120
Query 121 CTTCCTCCGATACCTCGACGAATCCCACAAGCACTCATCAGAAGAACCGTCGCACTCATC 180
| ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 121 CATCCTCCGATTCCTCGACAAATCCCACAAGCACTCATCAGAAGAACCGTCGCACTCAT- 179
Query 181 CGA-AGATGTCACTACCCGTCGCTATCTCTCCTCTCTAAAGCCTTTCGTCGCGTAATCTC 239
| | |||||||| |||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 180 CAAGAGATGTCATTACCCGTCGCTATCTCTCCTCTCTAAAGCCTTTCGTATCGTAATCTC 239
Query 240 TTCGCCGGAACTCCACCACAGACGCTTGAGTCTCCACCTAACCGAACCGGTTCTTTACGC 299
|||||||||||||||||| | ||||| ||| || |||||||||||||||||||||||||
Sbjct 240 TTCGCCGGAACTCCACCAAACACGCTCGAGCCTAAACCTAACCGAACCGGTTCTTTACGC 299
Query 300 TTTGATCGGATTCCCTTCTCATGGTTTCCCGACCTGGTTCATTCTCAACCACAACATTCC 359
|||||||||||||||| ||||| ||||||||| ||||||||||||||||||||||||| |
Sbjct 300 TTTGATCGGATTCCCTCCTCATAGTTTCCCGAACTGGTTCATTCTCAACCACAACATTAC 359
Query 360 AAGAAACATCCCATTAAGACTGAGC-CAAATCGGTTCACTTCCTCCTATGAATCCTGGTT 418
|||||||||||||||| || ||||| | ||||||||||||||||||||||||||||| |
Sbjct 360 AAGAAACATCCCATTACGATTGAGCGC-TATCGGTTCACTTCCTCCTATGAATCCTGGCT 418
Query 419 CTGCTGTGGTCACAATCGGCTACAAGATGTATGTGATCGGTGGAATGATAGGCCCATTTA 478
|||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||
Sbjct 419 CTGCTGTGGTCACAATCGGCTACAAGATGTATGTGATCGGTGGACTGATAGGGCCAAATA 478
Query 479 ACCATGTAAAGACTGTGTTTGTCATCGACTGTAGAGTCCATACGTGTAACTATCTCCCAA 538
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 479 ACCCTGTAAAGACTGTGTTTGTCATCGACTGTAGAGTCCATACGTGTAACTATCTCCCAA 538
Query 539 CTATGCATAGGGCTCGTTACCGTGCAGTCGCAGAAGTAATTGACGGAAAGATTTATGTCA 598
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 539 CTATGCATAGGGCTCGTTACCGTGCAGTCGCAGAAGTAATCAACGGAAAGATTTATGTCA 598
Query 599 TCGGAGGTTGCGAGAAGCGGTATGAGGATTGGATCGAAGTGTTCGATGTAGAGAATGGGA 658
|||||||||||||||||||||| || ||||||||||||||||||||||||| || ||| |
Sbjct 599 TCGGAGGTTGCGAGAAGCGGTACGACGATTGGATCGAAGTGTTCGATGTAGTGACTGGAA 658
Query 659 CTTGGAGTACTGTTCCTGATCCATCCCCTTGGAAGTCTAGTTTGCCAGGAGGAGGGTTTG 718
|||||||||||| ||||||| ||||| || | ||||||||||||||||||||||||||
Sbjct 659 TTTGGAGTACTGTCCCTGATCGATCCCATTTCATGTCTAGTTTGCCAGGAGGAGGGTTTG 718
Query 719 TGACATCTGTTGTGATGCAAAACAAGATTTACATTTTGGATGAT-CTGCGTGGTTTGGTT 777
|||||||||| ||||||||||||||||||||||||||||||| | | | |||||||||||
Sbjct 719 TGACATCTGTGGTGATGCAAAACAAGATTTACATTTTGGATGCTAC-GTGTGGTTTGGTT 777
Query 778 TATGATCCCAATGATGGTACATGGGAGTCATGGGAGCCTGAAACTAAGTTGATGTCTTAT 837
|||||||||| ||||||||||||||||||| |||||| || ||||| ||||| ||||||
Sbjct 778 TATGATCCCATTGATGGTACATGGGAGTCAGGGGAGCTTGGAACTACGTTGAAGTCTTAC 837
Query 838 TGG-AGCAAGCCGTGTTGTGTGATTGAGGATTTGTTGTATAGTTTGGATCCATGGTGT-- 894
||| | ||||||||||||||||||||||||||||||||||||||| ||||||| |||
Sbjct 838 TGGTA-CAAGCCGTGTTGTGTGATTGAGGATTTGTTGTATAGTTTTGATCCATACTGTCT 896
Query 895 ----G-TTC----A-A---GTGTATGATCCAAATGGAATGTTTTGGACTCCTGTGATGGG 941
| ||| | | |||||||||||||||| ||| ||||||||||| |||||||
Sbjct 897 TCAAGGTTCTCCGATAAATGTGTATGATCCAAATGTCATGGTTTGGACTCCTATGATGGG 956
Query 942 T-----T-TACATGGTTTGCCTAATCT-GAATTACTTCAATTGTAAAATGGCGAATGTTG 994
| | ||| || ||| ||| |||| || |||||| | ||||||||||||||| |||
Sbjct 957 TACGGGTATACGTGCTTTTCCTGATCTCGA-TTACTTTGAGTGTAAAATGGCGAATTTTG 1015
Query 995 GTGGGAAGTTGATGGTTTTGGGTACTACTGATAACATTTGGTGTGTAGAGAT--TTGGTG 1052
||||||||||||||||||| ||| ||||| |||||| | || || |||| ||||||
Sbjct 1016 GTGGGAAGTTGATGGTTTTTGGTGCTACTTATAACAACCCG-GT-TACAGATACTTGGTG 1073
Query 1053 TGTAGAGATCGCGTTGGA-AAAACGTGAAAGAGGTCAGATTTGGGGGAAGATCGATTCAA 1111
||||||| |||||| | |||| |||||| ||||| ||||| ||||| |||||||||||
Sbjct 1074 CATAGAGATGGCGTTG-ATAAAAGGTGAAACAGGTCCGATTTTGGGGATGATCGATTCAA 1132
Query 1112 TGGAGCGTGTGCTTAGATCCATGAACGCGGCTTATATTGATCTTTGCCGCTCTGTTACGT 1171
||| || ||||||||||||| || || || |||| ||||||||||| ||||||||||| |
Sbjct 1133 TGGTGCCTGTGCTTAGATCCGTGTACTCGCCTTACATTGATCTTTGTCGCTCTGTTACAT 1192
Query 1172 TCTGATGATCTGTGGGTTGGTTGTTTC-G-TGAAGGATCTTTTGATTACATCTACTATTT 1229
| |||||||||||||| |||| ||||| | | ||||||||||| |||||||||||| |||
Sbjct 1193 TTTGATGATCTGTGGGATGGT-GTTTCAGGTCAAGGATCTTTT-ATTACATCTACTGTTT 1250
Query 1230 TGAGCAGCTTGTTGATTTCAGAGCAAATATGAAGAA-AAAA-GTG-GTGCAGAAGCTGTT 1286
|||||||||| ||||||||||||||||||||||||| |||| ||| || |||||||||||
Sbjct 1251 TGAGCAGCTTATTGATTTCAGAGCAAATATGAAGAAGAAAAAGTGTGTTCAGAAGCTGTT 1310
Query 1287 ATATATATATCTGACACCTT-ATAGAGTAAATCATCTTTCTTTACCTTTGTGCAAAAATG 1345
|||| |||||||||| ||||||||| || |||||||| |||||||||||||||||
Sbjct 1311 ATAT------CTGACACCTTTATAGAGTAACTCGTCTTTCTTAACCTTTGTGCAAAAATG 1364
Query 1346 TGAATACTCTT--C-----T----T-GTGTTTGTGTAGAGTCGGCCACTCTTTTGTACTA 1393
||||||||||| | | | ||||||||||||||| ||||||||||||||||||
Sbjct 1365 TGAATACTCTTAACAGAACTGGCCTTGTGTTTGTGTAGAGTTGGCCACTCTTTTGTACTA 1424
Query 1394 AAACTCTTACGAGACTTGTTGAAATGCATCTTTGGTTTAGCT 1435
| | ||||||||||||||||||||||||||||||||||||||
Sbjct 1425 ATATTCTTACGAGACTTGTTGAAATGCATCTTTGGTTTAGCT 1466
> AT2G29770.1 | Symbols: | Galactose oxidase/kelch repeat superfamily
protein | chr2:12715411-12716875 REVERSE LENGTH=1363
Length=1363
Score = 621 bits (336), Expect = 5e-177
Identities = 937/1214 (77%), Gaps = 94/1214 (8%)
Strand=Plus/Plus
Query 100 CAAGAAGAAGAAGCAGAGAATCTTCCTCCGATACCTCGACGAATCCCACAAGCACTCATC 159
||||||||||||| |||||||||||||||||| |||| | |||||||| | | |||||||
Sbjct 66 CAAGAAGAAGAAGAAGAGAATCTTCCTCCGATTCCTCAAGGAATCCCAGACGAACTCATC 125
Query 160 AG-AAGAACCGTCGCACTCATCCGAAGATGTCACTACCCGTCGCTATCTCTCCTCTCTAA 218
| ||| |||||| ||| ||||| |||||||| |||||| |||||||||||||||| ||
Sbjct 126 -GAAAGTACCGTCTTACTAATCCGGAGATGTCATTACCCGACGCTATCTCTCCTCTCCAA 184
Query 219 AGCCTTTCGTCGCGTAATCTCTTCGCCGGAACTCCACCACAGACGCTTGAGT-CTCCACC 277
| ||||||||||||| |||||||| |||||||| || | || ||||| | | ||| |||
Sbjct 185 AACCTTTCGTCGCGTTATCTCTTCTTCGGAACTCTACAAAAGCCGCTTCA-TCCTCAACC 243
Query 278 TAACCGAAC-CGGTTCTTTACGCTTTGATCGGATTCCCTTCTCATGGTTTCC-CGACCTG 335
| |||| || | ||||||||||| |||||||||||| || || || | || | | ||
Sbjct 244 TCACCG-ACTCAGTTCTTTACGCCTTGATCGGATTCTCTCCTTAT-AATACCACAAACTT 301
Query 336 GTTCATTCTCAACCACAACATTCCAAGAAACATCCCATTAAGAC-TGAGCCAAATCGGTT 394
|| ||||||||| |||||||||||||||||| | || | || |||| ||||| |
Sbjct 302 GTACATTCTCAATTGTAACATTCCAAGAAACATCTC-TTTACACTTGAGAGAAATCAAAT 360
Query 395 CACTTCCTCCTATGAATCCTGGTTCTGCTGTGGTCACAATCGGCTACAAGATGTATGTGA 454
||||||||||| |||||| ||| ||||| |||||||||||||| ||| | |||||||| |
Sbjct 361 CACTTCCTCCTCTGAATCATGGATCTGCGGTGGTCACAATCGGATACCATATGTATGTAA 420
Query 455 TCGGTGGA-ATGATA-GGCC--CATTTAA-CCATGTAAAGACTGTGTTTGTCATCGACTG 509
|||||||| | | | ||| || | || ||| | || ||||| | ||||||| |
Sbjct 421 TCGGTGGACA-CA-ACCGCCTACA-TCAACCCA--CATCGAATGTGTCTATCATCGA-TT 474
Query 510 T-AGAGTCCATACGTGTAACTATCTCCCAACTATGCATAGGGCT--CGT-TACCGTGCAG 565
| ||| | ||||||| | || ||||| | ||||| || || ||| || | ||||
Sbjct 475 TGAGATTTCATACGTCTTGCTCGCTCCCGAGAATGCAGAGAACTCGCGTCTA-C--GCAG 531
Query 566 TC-GCAGAAGTAATTGACGGAAAGATTTATGTCATCGGAGGTTGCGAGAAGCGGTATGAG 624
| |||| |||||||||||||| ||||||||| ||||||||||||| |||||| ||||
Sbjct 532 -CTGCAGGAGTAATTGACGGAAGGATTTATGTGATCGGAGGTTGCGTGAAGCGAAATGAT 590
Query 625 GATTGGATCGAAGTGTTCGATGTAGAGAATGGGACTTGGAGTACTGTTCCTGATCCATCC 684
|||||||||||||||||||| |||||||| ||| |||||||| ||| ||| || ||| |
Sbjct 591 CATTGGATCGAAGTGTTCGATATAGAGAATCGGATTTGGAGTAGTGTGCCTCAT-CAT-C 648
Query 685 CCT--TGGAA--G-TCTAGTTTGCCAGGAGGAGGGTTTGTGACATCTGTTGTGATGCAAA 739
| || || | ||||||||| ||||| ||||||||||||||| || ||||||||||
Sbjct 649 GATACTGTAACGGTTCTAGTTTGAGAGGAGAAGGGTTTGTGACATCAGTGGTGATGCAAA 708
Query 740 ACAAGATTTACATTTTGGATGATCTGCGTGGTTTGGTTTATGATCCCAATGAT--GGTAC 797
|||||||||||||||||||| |||| |||||| | ||| || || || || |||||
Sbjct 709 ACAAGATTTACATTTTGGATTCTCTGTTTGGTTTTGCTTACGAACC-AA-GACACGGTAC 766
Query 798 ATGGGAGTCATG-GGAGCCTGAAACTAAGTTGATGTCTTATT-GGAGCAAGCCGTGTTGT 855
|| | |||||| ||| ||||||| |||| |||| || || || || | |||||||||
Sbjct 767 ATTGCAGTCATTAGGATT-TGAAACTCAGTTCATGT-TTCTTTGGCGCGACCCGTGTTGT 824
Query 856 GTGATTGAGGATTTGTTGTATAGT-TTGGATCC-ATG-GTGTG-TT---CA---A---GT 902
|||||||||| |||||||||| || ||| |||| ||| |||| || || | ||
Sbjct 825 GTGATTGAGGGTTTGTTGTATTGTATTG-ATCCTATGTGTGTTCTTGGACATGCAATAGT 883
Query 903 -GT--ATGATCCAAATGGAAT-GTTTTGGACTCCTGTGATGGGTTTACATGGTTTGCCTA 958
|| ||||||| |||| | | | |||||| | ||||| ||| | || ||||||||
Sbjct 884 TGTTTATGATCCGAATG-AGTTGATTTGGAGACGTGTGAAGGGGGCATATATTTTGCCTA 942
Query 959 A-TCT-GA-ATTACTTCAATTGTAAAATGGCGAATGTTGGTGGGAAGTTGATGGTTTTGG 1015
| | | | |||| | || | |||||||||||||| |||||||||||||| ||||||
Sbjct 943 AGTTTTGTTATTA-T-CAGT-GTAAAATGGCGAATTTTGGTGGGAAGTTGGCAATTTTGG 999
Query 1016 G-TACTACTGATA--A-C-ATT-TGGTGTGTAGAGAT-TT-GGTGT-GTAGAGATCGCGT 1066
| | | || || | | | |||| || | |||| || ||| | |||||||| | ||
Sbjct 1000 GATGTT-CTAATTCCAGCCAGCGTGGTTTGAA-AGATGTTTGGT-TCGTAGAGATTGAGT 1056
Query 1067 TGGAAAAACGTGAAAGAGGTCAGATTTGGGGGAAGATCGATTCAATGGAGCGTGTGCTTA 1126
||||||| ||| |||| ||| |||||||||||||| |||||||| ||| | ||||||||
Sbjct 1057 TGGAAAATCGTCAAAGTGGTGAGATTTGGGGGAAGGTCGATTCATTGGCGATTGTGCTTA 1116
Query 1127 GATCCA-TGAACG-CGGCTTATATTGATCT-TTGCCGCTCTGTTACGTTCTGATGAT-CT 1182
|||| | |||| | || ||| |||||||| || | ||||||||||||| ||||||| |
Sbjct 1117 GATC-AGTGAA-GTCGCCTTCCATTGATCTGTTTC-GCTCTGTTACGTTTTGATGATTC- 1172
Query 1183 GTGGGTTGGTTGTTTCGTGAAGGATCTTTTGATTACATCTACTATTTTGAGCAGCTTGTT 1242
|| | | ||| |||||||||||||| |||| ||||||| |||| |||||||||||
Sbjct 1173 GTTTGCAG-TTGCAAGGTGAAGGATCTTTT-ATTATATCTACTGTTTT-AGCAGCTTGTT 1229
Query 1243 GATTTCAGAGCAAA 1256
||| | | ||||||
Sbjct 1230 GATATGA-AGCAAA 1242
Score = 67.6 bits (36), Expect = 3e-10
Identities = 45/49 (92%), Gaps = 1/49 (2%)
Strand=Plus/Plus
Query 1386 TTGTACTAAAACTCTTACGAGACTTGTTGAAATGCATCTTTGGTTTAGC 1434
|||||||||| ||||| ||||||||||||||||||| |||||||||||
Sbjct 1316 TTGTACTAAAT-TCTTAGGAGACTTGTTGAAATGCATATTTGGTTTAGC 1363
> AT2G29600.1 | Symbols: | Galactose oxidase/kelch repeat superfamily
protein | chr2:12655151-12657296 FORWARD LENGTH=2057
Length=2057
Score = 183 bits (99), Expect = 3e-45
Identities = 444/603 (74%), Gaps = 54/603 (9%)
Strand=Plus/Plus
Query 77 AGAACCCTAAAGAAGACGATCATCAAGAAGAAGAAGCAGAGAATCTTCCTCCGATACCTC 136
|||| || |||||||||||||||||||||||||||| ||||||| |||||| ||| ||||
Sbjct 626 AGAAACCGAAAGAAGACGATCATCAAGAAGAAGAAGTAGAGAATGTTCCTCAGATTCCTC 685
Query 137 GACGAATCCCACAAGCACTCATCAG-AAGAACCGTCGC-ACTCATCCGAAGATGTCACTA 194
|| ||| |||| || ||| ||| | ||| ||| |||| |||| |||| |||||||| ||
Sbjct 686 CACAAATGCCACTAGAACTAATC-GTAAGCACCATCGCGACTC-TCCGGAGATGTCATTA 743
Query 195 CCCGTCGCTATCTCTCCTCTCTAAAGCCTTTCGTCGCGTAATCTCTTCGCCGGAACTCCA 254
|||| ||||||||||||||||| | ||||||||| |||||||||||| ||| |||
Sbjct 744 CCCGACGCTATCTCTCCTCTCTGACTCCTTTCGTCAAGTAATCTCTTCGGTGGATCTCTT 803
Query 255 CCACAGACGCTTGAGTC-TCCAC-CTAACCGAACCGGTTCTTTACGCTTTGATCG-GATT 311
||| | |||| | || || | | | | |||||||||||||| | |||||| | ||
Sbjct 804 CCAAACTCGCTCGC-TCATCGGCTCGA-CGGAACCGGTTCTTTATACCTTGATCACG-TT 860
Query 312 CCCTTCTC-ATGGTTTCCCGA-CC----TGGTTCATTCTC-AACC-ACAACATTCCAAGA 363
| | || | | ||| || || ||||| |||||| ||| | || | | || |
Sbjct 861 CACGTCCCCAAATTTTGAAGAACCAAGATGGTTTATTCTCCAACGGAGAA-A--C-AATA 916
Query 364 AACATCCCATTA-AGACTGAGCCAAATCGGTTCACTTCCTCCTATGAATCCTGGTT-CTG 421
| || ||| | | ||||| | || || |||||||| ||| |||||| | |
Sbjct 917 C-C-TCT--TTACA-ATTGAGCTTAGTCACATCTCTTCCTCCCATGTTTCCTGGATGCA- 970
Query 422 CTGTGGTCACAATCGG-CTACAAGATGTATGTGATCGGTGGAATGATAGGCCCATTTAAC 480
|| ||||||||||| | ||||||| || || || |||||| | | | || || ||
Sbjct 971 CTACCGTCACAATCGGAC-ACAAGATTTACGTTATGGGTGGACTCAGAAGC---TTGAAT 1026
Query 481 C-ATGT--AAAGACTGTGTTTGTCATCGACTGTAGAGTCCATACGTGTAACTATCTCCCA 537
| | | |||||||||||||||||||||||| ||| |||||||||| |||||||| |
Sbjct 1027 CGACGCGCAAAGACTGTGTTTGTCATCGACTGCAGATTCCATACGTGGCGCTATCTCC-A 1085
Query 538 --ACTATGCATAG-GGCTCGTTACCGT--GCAG-TCGCAGAAGTAATTGACGGAAAGATT 591
| ||||| || |||||||| || | |||| | | | ||| |||||||||| ||||
Sbjct 1086 GGAG-ATGCA-AGTGGCTCGTT-CC-TACGCAGCTT-CTGCAGTGATTGACGGAATGATT 1140
Query 592 TATGTCATCGGAGGTTGCGAG-AAGCGGTA-TGAGGATTGGATCGAAGTGTTCGATGTAG 649
|| || | ||||||| | | || || | ||| |||||| ||||||||||| ||||||
Sbjct 1141 TACGTGGTGGGAGGTTCC-ACTAAACGA-AGTGATGATTGGGTCGAAGTGTTCAATGTAG 1198
Query 650 AGA 652
|||
Sbjct 1199 AGA 1201
Score = 117 bits (63), Expect = 3e-25
Identities = 149/186 (80%), Gaps = 23/186 (12%)
Strand=Plus/Plus
Query 1256 ATATGAAGAAAAAAGTGGTGCAGAAGCTGTTATATATATATCTGACACCTTATAGAGTAA 1315
|||||||| ||||||||||||||||| | ||||||||||| ||||| ||||||
Sbjct 1808 ATATGAAG-CAAAAGTGGTGCAGAAGC-------TCTATATCTGACAACTTATGGAGTAA 1859
Query 1316 ATCATCTTTCTTTACCTTTGTGCAAAAATGTGAATACTCTTCTT-G--T--GT-TTGTGT 1369
|| ||||||||||||||||||||||||||||||||||||| | | | ||||||
Sbjct 1860 CTCGTCTTTCTTTACCTTTGTGCAAAAATGTGAATACTCTTAAAAGAATTAGCCTTGTGT 1919
Query 1370 AGAGTCGGCCACTCTTTT-G-TA--C--TA-AAAC-T-CTTACGAGACTTGTTGAAATGC 1420
||||| |||||||||||| | | | || ||| | |||| |||||||||||||||||
Sbjct 1920 AGAGTTGGCCACTCTTTTAGCTTTTCGATACAAAAGTTCTTATGAGACTTGTTGAAATGC 1979
Query 1421 ATCTTT 1426
||||||
Sbjct 1980 ATCTTT 1985
Score = 102 bits (55), Expect = 9e-21
Identities = 75/84 (89%), Gaps = 4/84 (5%)
Strand=Plus/Plus
Query 10 ATCTCTGAAACTTCCGACGACGGCTCTAACGGTGGCG-TACCAAACAAGAAATCCGAAGA 68
|||||||||||||||||||||||||||||||| |||| | |||||| ||||| |||||||
Sbjct 520 ATCTCTGAAACTTCCGACGACGGCTCTAACGGCGGCGAT-CCAAACCAGAAACCCGAAGA 578
Query 69 AC-TCCACAAGAACCCTAAAGAAG 91
|| || |||||||||| ||||||
Sbjct 579 ACCTC-ACAAGAACCCGCAAGAAG 601
> AT2G29800.1 | Symbols: | Galactose oxidase/kelch repeat superfamily
protein | chr2:12722939-12724602 REVERSE LENGTH=1565
Length=1565
Score = 121 bits (65), Expect = 2e-26
Identities = 85/94 (90%), Gaps = 4/94 (4%)
Strand=Plus/Plus
Query 1 ATGGCTA-TAATCTCTGAAACTTCCGACGACGGCTCTAACGGTGGCGTACCAAACAAGAA 59
||||||| | |||||||||||||||||||||||||||||||| ||||| |||||| ||||
Sbjct 1 ATGGCTAGT-ATCTCTGAAACTTCCGACGACGGCTCTAACGGCGGCGTTCCAAACCAGAA 59
Query 60 ATCCGAAGAACTCCACAAGAACCCTA-AAGAAGA 92
| ||||||||| |||||||||||| | |||||||
Sbjct 60 ACCCGAAGAACCCCACAAGAACCC-ACAAGAAGA 92
> AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715852 FORWARD LENGTH=2733
Length=2733
Score = 67.6 bits (36), Expect = 3e-10
Identities = 45/49 (92%), Gaps = 1/49 (2%)
Strand=Plus/Minus
Query 1386 TTGTACTAAAACTCTTACGAGACTTGTTGAAATGCATCTTTGGTTTAGC 1434
|||||||||| ||||| ||||||||||||||||||| |||||||||||
Sbjct 2339 TTGTACTAAAT-TCTTAGGAGACTTGTTGAAATGCATATTTGGTTTAGC 2292
> AT2G21680.1 | Symbols: | Galactose oxidase/kelch repeat superfamily
protein | chr2:9267730-9269019 FORWARD LENGTH=1290
Length=1290
Score = 63.9 bits (34), Expect = 4e-09
Identities = 55/64 (86%), Gaps = 5/64 (8%)
Strand=Plus/Plus
Query 1 ATGGCTATAATCTCTGAAACTTCCGACGACGGCTCTAAC-GGTGGCG-T-ACCAAA-CAA 56
|||| | |||||||||||||||||||||||||||||| | || |||| | | |||| |||
Sbjct 1 ATGGTTTTAATCTCTGAAACTTCCGACGACGGCTCTA-CTGGCGGCGATCATCAAATCAA 59
Query 57 GAAA 60
||||
Sbjct 60 GAAA 63
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 70732567905
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5