BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg481942
Length=1084
Score E
Sequences producing significant alignments: (Bits) Value
AT2G30310.1 | Symbols: | GDSL-like Lipase/Acylhydrolase family... 1659 0.0
AT2G30220.1 | Symbols: | GDSL-like Lipase/Acylhydrolase family... 1321 0.0
> AT2G30310.1 | Symbols: | GDSL-like Lipase/Acylhydrolase family
protein | chr2:12923055-12924380 FORWARD LENGTH=1089
Length=1089
Score = 1659 bits (898), Expect = 0.0
Identities = 1024/1086 (94%), Gaps = 4/1086 (0%)
Strand=Plus/Plus
Query 1 ATGTATACATCTAAAACCTTAGTGTTTGGTCT-TTTCGTTGCAACACTCCTCGTGTCTTG 59
|||| ||||||||||||| ||||||||||||| ||| || |||||||||||||| |||||
Sbjct 1 ATGTCTACATCTAAAACCATAGTGTTTGGTCTCTTT-GTCGCAACACTCCTCGTCTCTTG 59
Query 60 CAATGCGGCTGCAAACGCCACAATGCAGCCGCTTTTCCCAGCGATTCTAATCTTCGGGGA 119
||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||| ||
Sbjct 60 CAATGTGGCTGCAAACGCCACAACGCAGCCGCTTTTCCCAGCGATTCTAATCTTCGGTGA 119
Query 120 CTCAACCGCAGACACAGGCAACAATAACTACGATTTACAAACCATCTTCAAGGCTATGCA 179
|||||||| ||||||||||||||| |||||| ||| |||||||||||||||||||| |||
Sbjct 120 CTCAACCGTAGACACAGGCAACAACAACTACCATTCACAAACCATCTTCAAGGCTAAGCA 179
Query 180 TCTTCCTTACGGAGTTGATCTCCCCGGCCATGAAGCGAGCGGAAGAT-TCTCGAATGGAA 238
||| |||||||| |||||||| || ||||||||||| | |||||||| | || |||||||
Sbjct 180 TCTCCCTTACGGCGTTGATCTACCGGGCCATGAAGCTAACGGAAGATAT-TCAAATGGAA 238
Query 239 AACTAATCTCTGATATCATTGCTTCCAAACTCAACATTAAAGAGTTGGTTCCTCCATTTC 298
|| |||||||||| |||||||||||||||||||||| ||||||||||||||||| ||||
Sbjct 239 AAGTAATCTCTGACGTCATTGCTTCCAAACTCAACATCAAAGAGTTGGTTCCTCCGTTTC 298
Query 299 TACAACCAAACATCTCCGACCAAGACATTGTCACTGGCGTCTGTTTTGCATCCGCGGGTG 358
||||||||||||||||| |||||||||||||||||||||||| ||| |||||||||||||
Sbjct 299 TACAACCAAACATCTCCCACCAAGACATTGTCACTGGCGTCTCTTTCGCATCCGCGGGTG 358
Query 359 CGGGCTACGATGACCGGACCTCACTCTCGAGCAAAGCAATCCCAGTCTCACAGCAACCAA 418
|||||||||||||||||| |||||||||||||||||||||||| |||||||| || ||||
Sbjct 359 CGGGCTACGATGACCGGAGCTCACTCTCGAGCAAAGCAATCCCGGTCTCACAACAGCCAA 418
Query 419 GCATGTTCAAGAATTACATTGCTCGTCTGAAAGGTATCGTAGGGGACAAGAAAGCGATGG 478
||||||| |||||||| ||||||||||| |||||||||||||| ||||||||||| ||||
Sbjct 419 GCATGTTTAAGAATTATATTGCTCGTCTCAAAGGTATCGTAGGAGACAAGAAAGCAATGG 478
Query 479 AGATCATCAACAACGCTTTAGTGGTCATAAGCGCAGGGCCTAACGACTTCATCTTGAACT 538
||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 479 AGATCATTAACAACGCTTTAGTGGTCATAAGCGCAGGGCCTAACGATTTCATCTTGAACT 538
Query 539 TTTATGATATCCCCACGAGGCGTCTCGAGTATCCTACTATCTATGGTTACCAAGAGTTTA 598
||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||
Sbjct 539 TTTATGATATCCCCACGAGGCGTCTTGAGTATCCTACTATCCATGGTTACCAAGAGTTTA 598
Query 599 TCCTCAAGAGGCTTGACGGTTTTGTCCGGGAGCTTTATAGTTTAGGTTGCCGAAATATTG 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 599 TCCTCAAGAGGCTTGACGGTTTTGTCCGGGAGCTTTATAGTTTAGGTTGCCGAAATATTG 658
Query 659 TGGTCGGAGGGCTACCTCCAATGGGATGTTTACCGATCCAAATGACCACAAAAATGAGAA 718
||||||||||| |||| ||||||||||||||||| |||||||||||| | ||||||||||
Sbjct 659 TGGTCGGAGGGTTACCACCAATGGGATGTTTACCAATCCAAATGACCGCGAAAATGAGAA 718
Query 719 ACATATTGAGATTTTGTGTGGAACAAGAGAACAAAGACTCCGTTTTGTACAATCAGAAAC 778
|||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 719 ACATTTTGAGATTTTGTGTGGAACAAGAAAACAAAGACTCCGTTTTGTACAATCAGAAAC 778
Query 779 TAGTAAAGAAACTGCCTGAGATCCAAGCGTCTCTACCCGGAAGCAAGTTCCTTTACGCCA 838
||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||
Sbjct 779 TAGTAAAGAAACTGCCTGAGATCCAAGCGTCTCTACCGGGAAGCAATTTCCTTTACGCCA 838
Query 839 ACGTCTACGACCCATTAATGGACATGATCCAAAACCCTAGTAAATACGGATTCAAGGAGA 898
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 839 ACGTCTACGACCCATTGATGGACATGATCCAAAACCCTAGTAAATACGGATTCAAGGAGA 898
Query 899 CAAAGAAAGGATGTTGCGGAACAGGATACTTGGAAACGGCCTTCATGTGCAATCCCTTTA 958
| ||||||||||||||||||||||||||||||||||| | ||||||||||||||| |||
Sbjct 899 CTAAGAAAGGATGTTGCGGAACAGGATACTTGGAAACAACATTCATGTGCAATCCCCTTA 958
Query 959 CAAAGACTTGTCCGAATCACTCGGATCACTTGTTTTGGGACTCAATTCATCCCTCAGAAG 1018
|||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct 959 CAAAGACTTGTCCGAATCACTCCGATCACTTGTTTTGGGACTCAATTCATCCCTCGGAAG 1018
Query 1019 CTGCTTACAATTACATTGGCAACTTTGTGGATGCTCAGATTCGAGGCTGGATTAAGGCTT 1078
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1019 CTGCCTACAATTACATTGGCAACTTTGTGGATGCTCAGATTCGAGGCTGGATTAAGGCTT 1078
Query 1079 AAGCCA 1084
||||||
Sbjct 1079 AAGCCA 1084
> AT2G30220.1 | Symbols: | GDSL-like Lipase/Acylhydrolase family
protein | chr2:12891266-12892537 REVERSE LENGTH=1077
Length=1077
Score = 1321 bits (715), Expect = 0.0
Identities = 968/1089 (89%), Gaps = 21/1089 (2%)
Strand=Plus/Plus
Query 1 ATGTATACATCTAAAACCTTAGTGTTTGGTCT-TTTCGTTGCAACACTCCTCGTGTCTTG 59
||||||| |||||||||| ||||||||||||| ||| |||||||||||||||||||||||
Sbjct 1 ATGTATATATCTAAAACCATAGTGTTTGGTCTCTTT-GTTGCAACACTCCTCGTGTCTTG 59
Query 60 CAATGCGGCTGCAAACGCCACAATGCAGCCGCTTTTCCCAGCGATTCTAATCTTCGGGGA 119
|||||||| ||||||| |||| ||||||||||||||| ||||||||||| ||||| ||
Sbjct 60 CAATGCGGATGCAAACACCAC---GCAGCCGCTTTTCCCGGCGATTCTAATATTCGGCGA 116
Query 120 CTCAACCGCAGACACAGGCAACAATAACTACGATTTACAAACCATCTTCAAGGCT-ATGC 178
|||||| |||||||||||||| || |||||| | | |||| || ||||||||||| || |
Sbjct 117 CTCAACGGCAGACACAGGCAATAACAACTACTACTCACAAGCCGTCTTCAAGGCTAAT-C 175
Query 179 ATCTTCCTTACGGAGTTGATCTCCCCGGCCATGAAGCGAGCGGAAGATTCTCGAATGGAA 238
| || ||||| || |||||||| |||||||| ||||| | |||||||||||| || ||||
Sbjct 176 ACCTCCCTTATGGCGTTGATCTTCCCGGCCACGAAGCTAACGGAAGATTCTCAAACGGAA 235
Query 239 AACTAATCTCTGATATCATTGCTTC-C-AAACTCAACATTAAAGAGTTGGTTCCTCCATT 296
| ||||||||||| | | | || | | ||||||||||| |||||||| |||||||| ||
Sbjct 236 AGCTAATCTCTGACGT-AAT-CTCCACAAAACTCAACATCAAAGAGTTTGTTCCTCCGTT 293
Query 297 TCTACAACCAAACATCTCCGACCAAGACATTGTCACTGGCGTCTGTTTTGCATCCGCGGG 356
||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 294 TCTACAACCGAACATCTCCGACCAAGACATTGTCACTGGAGTCTGTTTTGCATCCGCGGG 353
Query 357 TGCGGGCTACGATGACCG-GACCTCACTCTCGAGCAAAGCAATCCCAGTCTCACAGCAAC 415
||| ||||||||||| || ||||||||| || |||||||| || || |||||||| || |
Sbjct 354 TGCTGGCTACGATGA-CGAGACCTCACTATCTAGCAAAGCTATTCCGGTCTCACAACAGC 412
Query 416 CAAGCATGTTCAAGAATTACATTGCTCGTCTGAAAGGTATCGTAGGGGACAAGAAAGCGA 475
||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||||
Sbjct 413 CAAGCATGTTCAAGAATTATATTGCTCGTCTCAAAGGTATCGTAGGAGACAAGAAAGCGA 472
Query 476 TGGAGATCATCAACAACGCTTTAGTGGTCATAAGCGCAGGGCCTAACGACTTCATCTTGA 535
||||||| || ||||||||||||||||||||||||||||||||||| || ||||||||||
Sbjct 473 TGGAGATTATTAACAACGCTTTAGTGGTCATAAGCGCAGGGCCTAATGATTTCATCTTGA 532
Query 536 ACTTTTATGATATCCCCACGAGGCGTCTCGAGTATCCTACTATCTATGGTTACCAAGAGT 595
||||||| |||||||||| ||||||||||||||||||||||||||||| |||||||| |
Sbjct 533 ACTTTTACGATATCCCCATAAGGCGTCTCGAGTATCCTACTATCTATGGCTACCAAGATT 592
Query 596 TTATCCTCAAGAGGCTTGACGGTTTTGTCCGGGAGCTTTATAGTTTAGGTTGCCGAAATA 655
|| | |||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 593 TTGTTCTCAAGAGGCTTGACGGTTTTGTCCGGGAGCTTTATAGTTTAGGTTGCCGGAATA 652
Query 656 TTGTGGTCGGAGGGCTACCTCCAATGGGATGTTTACCGATCCAAATGACCACAAAAATGA 715
|| | ||||||||| | || |||||||||||||||||||||||| ||||| | ||| |||
Sbjct 653 TTCTAGTCGGAGGGTTGCCGCCAATGGGATGTTTACCGATCCAATTGACCGCGAAATTGA 712
Query 716 GAAACATATTGAGATTTTGTGTGGAACAAGAGAACAAAGACTCCGTTTTGTACAATCAGA 775
||| ||| ||| || |||||||||||||||| |||||||||||| |||||||||||||||
Sbjct 713 GAACCATTTTGGGAATTTGTGTGGAACAAGAAAACAAAGACTCCATTTTGTACAATCAGA 772
Query 776 AACTAGTAAAGAAACTGCCTGAGATCCAAGCGTCTCTACCCGGAAGCAAGTTCCTTTACG 835
| || ||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 773 AGCTTGTAAAGAAATTGCCTGAGATCCAAGCGTCTCTACCCGGAAGCAAGTTCCTTTACG 832
Query 836 CCAACGTCTACGACCCAT-TAATGGACATGATCCAAAACCCTAGTAAATACGGATTCAAG 894
| |||||||||||||| | | ||||||||||||| ||||||||| |||||||||||||||
Sbjct 833 CTAACGTCTACGACCC-TGTGATGGACATGATCCGAAACCCTAGCAAATACGGATTCAAG 891
Query 895 GAGACAAAGAAAGGATGTTGCGGAACAGGATACTTGGAAACG-GCCTTCATGTGCAATCC 953
||||| ||||||||||||||||||||||||||||||||||| || ||| |||||| | |
Sbjct 892 GAGACGAAGAAAGGATGTTGCGGAACAGGATACTTGGAAACAAGC-TTCTTGTGCACTTC 950
Query 954 CTT-TACAAAGACTTGTCCGAATCACTCGGATCACTTGTTTTGGGACTCAATTCATCCCT 1012
||| | ||||||||||||||||||| ||||||||||||||||||||||| ||||||||||
Sbjct 951 CTTGT-CAAAGACTTGTCCGAATCATTCGGATCACTTGTTTTGGGACTCCATTCATCCCT 1009
Query 1013 CAGAAGCTGCTTACAATTACATTGGCAACTTTGTGGATGCTCAGATTCGAG-GCTGGATT 1071
| || || |||||||| ||| | || ||||| | ||||||||||||| || | ||| ||
Sbjct 1010 CCGAGGCAGCTTACAAATACCTAGGGAACTTCATAGATGCTCAGATTCAAGAG-TGGCTT 1068
Query 1072 AAGGCTTAA 1080
||| |||||
Sbjct 1069 AAGACTTAA 1077
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 53112176610
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5