BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg481945 Length=930 Score E Sequences producing significant alignments: (Bits) Value AT2G30340.1 | Symbols: LBD13 | LOB domain-containing protein 13... 1389 0.0 AT4G33660.1 | Symbols: | unknown protein; Has 30201 Blast hits... 60.2 3e-08 > AT2G30340.1 | Symbols: LBD13 | LOB domain-containing protein 13 | chr2:12931219-12932582 REVERSE LENGTH=936 Length=936 Score = 1389 bits (752), Expect = 0.0 Identities = 874/932 (94%), Gaps = 11/932 (1%) Strand=Plus/Plus Query 1 CTCAAAAACAAACTTATAAATAGCATGCGTGAATGTCCCGAGAAAGGGAAGGATTTGGAG 60 ||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 11 CTCTAAAATAAACTTATAAATAGCATGCGTGAATGTCCCGAGAAAGGGAAGGATTTGGAG 70 Query 61 AGTACTACGAGATCGTTAAGAAGATAAAGAAAGATCCAACCTTCGA-ATCGACGACGGAT 119 |||||||||||| ||| ||||||||||||||||||||| ||||||| | | ||||||||| Sbjct 71 AGTACTACGAGACCGTCAAGAAGATAAAGAAAGATCCAGCCTTCGAGA-CAACGACGGAT 129 Query 120 CATGCCGTGATGGGTATCAGGAGACATGTGGCGGTGCCTCCGGGGACAACGTTGAACACC 179 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 130 CATGCCGTGATGGGAATCAGGAGACATGTGGCGGTGCCTCCGGGGACAACGTTGAACACC 189 Query 180 GTGACTCCATGCGCCGCTTGTAAGCTCCTCCGCCGTCGTTGTGCGGAGGAGTGTCCTTTC 239 || || |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 190 GTAACACCATGCGCCGCTTGTAAGCTCCTCCGCCGTCGTTGTGCGGAGGAGTGTCCTTTC 249 Query 240 TCGCCTTACTTCTCGCCGCACGAACCTCACAAGTTCGCCGCCGTTCATAAAGTCTTCGGT 299 |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| ||| Sbjct 250 TCGCCTTACTTCTCGCCGCATGAACCTCACAAGTTCGCTGCCGTTCATAAAGTCTTTGGT 309 Query 300 GCAAGTAACGTCTCCAAGATGCTTCTGGAAGTGGGAGAGAGCCAAAGAGGAGACGCAGCA 359 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 310 GCAAGCAACGTCTCCAAGATGCTTCTGGAAGTGGGAGAGAGCCAAAGAGGAGACGCAGCA 369 Query 360 AACAGTTTAGTATACGAAGCAAACCTCAGACTTAGAGATCCAATCTACGGTTGCATGGGA 419 || ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 370 AATAGTTTAGTATACGAAGCAAACCTAAGACTTAGAGATCCAATCTACGGTTGCATGGGA 429 Query 420 GCAATCTCAGCTCTTCAACACCACATTCAGTCTCTCCAATCCGAACTCACCG-CCGTCCG 478 ||||||||||||||||||||||||||||||||||| |||||||||||||| | ||||||| Sbjct 430 GCAATCTCAGCTCTTCAACACCACATTCAGTCTCTTCAATCCGAACTCAC-GACCGTCCG 488 Query 479 TACAGATATCCTCCGCCACAAATACCGAGAAGCCACCACCATCACTTCTCTCcaaaacaa 538 ||| || ||||| ||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 489 TACGGAAATCCTACGCCACAAATACCAAGAAGCCACCACCATCACTTCTCTCCAAAACAA 548 Query 539 caacaacttccacaacactacaacaacTTCATCAGTGAGTTGTGATCATCATGATCTCGG 598 | ||| ||| ||||||||||||||||||||||||||||||||| |||| ||||| Sbjct 549 C------TTCAACAGCACTACAACAACTTCATCAGTGAGTTGTGATCAGCATGCTCTCGC 602 Query 599 GGCAGCGATTCTTCTCCCACCACCACCGCCACCGCCTCCTCCTCCACGACCACCGAGGTT 658 | |||||||| |||||||||||||||||||| |||||| ||||||||||||| ||||| Sbjct 603 CTCGGCGATTCTCCTCCCACCACCACCGCCACCACCTCCTACTCCACGACCACCAAGGTT 662 Query 659 GTTGTCCTCTCAGCCAGCTCCACCGCCTACGCCACCAGCTTCTTTGCCGTCTCCGTCCAT 718 |||||||||||||||||||||||||||||||||||| | ||||||||| ||||||||||| Sbjct 663 GTTGTCCTCTCAGCCAGCTCCACCGCCTACGCCACCCGTTTCTTTGCCATCTCCGTCCAT 722 Query 719 GGTTGTGTCGTCCTCTTCGTCTTCTAATTCATCAGCTACCAATTCTATGTATAATCCTCC 778 |||||||||||||||||| |||||||||||||| || ||||||||||||||||||||||| Sbjct 723 GGTTGTGTCGTCCTCTTCATCTTCTAATTCATCTGCCACCAATTCTATGTATAATCCTCC 782 Query 779 TCCGTCTTCGGCTGCTGGATACAGTAATTCTCTGTCCAGTGATAATAATGTTCATTACTT 838 ||| |||||| | |||||||| || ||||||||||||||||||||||||||||||||||| Sbjct 783 TCCATCTTCGACGGCTGGATATAGCAATTCTCTGTCCAGTGATAATAATGTTCATTACTT 842 Query 839 TGATTAAATCAGAATTATGTGTTTCTTAAtttttttAAAAATGCTATTATAGCCCTTATC 898 |||||||||||||||| |||||| |||||||||||||||| | |||||||||||||||| Sbjct 843 TGATTAAATCAGAATTCTGTGTTCCTTAATTTTTTTAAAA-TACTATTATAGCCCTTATT 901 Query 899 ATAAGCTACGAGATTGAATGGTGATCCATGTT 930 |||||||||||||||||||||||||||||||| Sbjct 902 ATAAGCTACGAGATTGAATGGTGATCCATGTT 933 > AT4G33660.1 | Symbols: | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr4:16167286-16167951 REVERSE LENGTH=544 Length=544 Score = 60.2 bits (32), Expect = 3e-08 Identities = 34/35 (97%), Gaps = 0/35 (0%) Strand=Plus/Plus Query 618 CCACCACCGCCACCGCCTCCTCCTCCACGACCACC 652 |||||||||||||||||||||||||||| |||||| Sbjct 226 CCACCACCGCCACCGCCTCCTCCTCCACCACCACC 260 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 45461903035 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5