BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg481962 Length=1590 Score E Sequences producing significant alignments: (Bits) Value AT2G30500.1 | Symbols: | Kinase interacting (KIP1-like) family... 2338 0.0 > AT2G30500.1 | Symbols: | Kinase interacting (KIP1-like) family protein | chr2:12998159-13000102 REVERSE LENGTH=1754 Length=1754 Score = 2338 bits (1266), Expect = 0.0 Identities = 1487/1595 (93%), Gaps = 10/1595 (1%) Strand=Plus/Plus Query 1 TTTCTCTGCACTCCACGGTCATGGCCTCATCTACGGCTCAGAGCAAGAAGCAGTTTAAGA 60 ||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||| Sbjct 11 TTTCTCTGCACTCCACGGTCATGGCTTCGTCTACGGCTCAGAGCAAGAAGCAGTTTAAGA 70 Query 61 GGTCTATGACCAAGAAATCACACTCATGGTGGTGGGATAGTCACAATTCTCCCAAGAACT 120 |||||||||| ||||||||||| ||||||||||||||||||||||||| ||||||||||| Sbjct 71 GGTCTATGACTAAGAAATCACATTCATGGTGGTGGGATAGTCACAATTGTCCCAAGAACT 130 Query 121 CAAAATGGCTCGCAGAGAATCTAGAGAAGATGGATGATCGAGTGAACCACATGTTGAAAC 180 |||||||||| |||||||||||||| ||||||||||||||||||||||||||||| |||| Sbjct 131 CAAAATGGCTTGCAGAGAATCTAGAAAAGATGGATGATCGAGTGAACCACATGTTAAAAC 190 Query 181 TGATTGAAGAAGACGCAGACTCTTTTGCCAAGAAAGCTCAGATGTATTTCCAGAAGCGTC 240 |||||||||||||||||||||||||||| |||||||||||||||||||| ||||| |||| Sbjct 191 TGATTGAAGAAGACGCAGACTCTTTTGCAAAGAAAGCTCAGATGTATTTTCAGAAACGTC 250 Query 241 CAGAGTTAATCCAACTTGTTGAGGAATTCTACCGCATGTATCGCGCATTGGCTGAGCGTT 300 | ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 251 CCGAGTTAATCCAGCTTGTCGAGGAATTCTACCGCATGTATCGCGCATTGGCTGAGCGTT 310 Query 301 ATGATCAAGCTAGTGGTGAACTTCAGAAGAATCATACATCTGAGATCCAGTCACAGAGCT 360 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 311 ATGATCAAGCTAGTGGTGAACTTCAGAAGAACCATACATCTGAGATCCAGTCACAGAGCT 370 Query 361 CTCTTGAGTTATCATCTCCTACCAAAGAGAAGTTGAGTCGTCGTCAATCTGGCAATAAAG 420 |||||||| ||||||||||||||||||||||||||||||| ||||||||| || |||||| Sbjct 371 CTCTTGAGATATCATCTCCTACCAAAGAGAAGTTGAGTCGCCGTCAATCTAGCCATAAAG 430 Query 421 AAGAGGAAGATTCATCATCTTTGACTGATTCCGGTTCTGATTCTGATCATTCCTCTGCCA 480 |||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||||| Sbjct 431 AAGAGGAAGATTCATCGTCTTTGACAGATTCTGGTTCTGATTCTGATCATTCCTCTGCCA 490 Query 481 ATGATGAAGACGCTGACGAGGCACTGATCCGAAGGATGGCTGAT-TTAGAGCTTGAGCTT 539 |||||||||||| |||||||||| ||||||| || |||||||| || |||||||||||| Sbjct 491 ATGATGAAGACGGTGACGAGGCATTGATCCGTAGAATGGCTGAACTT-GAGCTTGAGCTT 549 Query 540 CAAGAGACAAAACAAAAGCTCCTTCTCCAGCAGGAAAGTGTTAATGGTGATAATAATGTT 599 |||||||| ||||| ||||||||||||||||||||||||||| ||||||| || |||||| Sbjct 550 CAAGAGACGAAACAGAAGCTCCTTCTCCAGCAGGAAAGTGTTGATGGTGACAACAATGTT 609 Query 600 GATCTCCTTCAGAAAATTGCTGTTTATGAGGGAGAGCTTAAAGAGGCTAATGAGAAGATG 659 ||||||||||| |||||| || |||||||||||||||||||| ||||||||||||||| Sbjct 610 GATCTCCTTCACAAAATTACTACATATGAGGGAGAGCTTAAAGAAGCTAATGAGAAGATG 669 Query 660 CGAATGCACGAAGAAGAGATCGCTAATCTGAAGGTTCAGCTTCAGAACTTCATGTCCTTT 719 |||||||||||||| ||||| |||||||||||| ||||||||||| ||||||||| ||| Sbjct 670 CGAATGCACGAAGACGAGATTGCTAATCTGAAGAATCAGCTTCAGAGCTTCATGTCTTTT 729 Query 720 GACACAGAAGCTCATCTTGGTGCTGAAGAAAAGAGTCCTGATTTGGATAAAGAGGACACT 779 |||||||| | |||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct 730 GACACAGAGGATCATCTTGGTGCTGAACAAAAGAGTGTTGATTTGGATAAAGAGGACACT 789 Query 780 AAAGAAGATGCAGCAGCTACAAAATTGCTAGCCTTGGAGGAAGAGCTCAGTAACGCGAAA 839 ||||||||||||| |||||||||| |||||||||||||||||||||| |||| ||||||| Sbjct 790 AAAGAAGATGCAGTAGCTACAAAAGTGCTAGCCTTGGAGGAAGAGCTGAGTATCGCGAAA 849 Query 840 GAGAAGCTTCAACACTTTGAGAAAGAGACTTATTCACT-AAAAATTGAGCTAGA-ACACG 897 ||||||||||| ||||||||||||||||||||||| || |||||| ||||| || | || Sbjct 850 GAGAAGCTTCAGCACTTTGAGAAAGAGACTTATTCTCTGAAAAAT-GAGCTCGAGAT-CG 907 Query 898 GTAAAGCTGCTGAGGAGAAGCTGAAGAGCTTACAGCATGAGCTTGAGTTGGCTCAGAAAG 957 | ||||| |||||||||||||||||||||||||| |||||||| ||||||||||||| || Sbjct 908 GCAAAGCCGCTGAGGAGAAGCTGAAGAGCTTACAACATGAGCTCGAGTTGGCTCAGAGAG 967 Query 958 ACACTGATACCTACTTAAACAGGCTCAATGTAGAGAAGAAAGAAGTCTTGAAGTTGCAGG 1017 || ||||||||||| |||||| |||||| | ||||||||||||||||||||||||||||| Sbjct 968 ACGCTGATACCTACATAAACAAGCTCAACGCAGAGAAGAAAGAAGTCTTGAAGTTGCAGG 1027 Query 1018 AGAGATTAGCAATGGTGAAAACTAGTTTACAGGATAGAGATAACGAGATACGGGCATTGA 1077 ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 1028 AGAGATTGGCAATGGTGAAAACTAGTTTACAGGATAGAGATAACGAGATAAGGGCATTGA 1087 Query 1078 AAACTGCGGTTTCTGATGCTGAACAAAAGATATTTCCCGAGAAAGCACAGATCATGGGAG 1137 ||||||||||||| || |||||||| |||||||| ||||| ||||||||||||| ||||| Sbjct 1088 AAACTGCGGTTTCAGACGCTGAACAGAAGATATTCCCCGAAAAAGCACAGATCAAGGGAG 1147 Query 1138 AAATGTCGAAGATGCTCGAAGAAAGAAGCCAACTTGGGGAGCAACTGAGAGAGCTGGAAT 1197 |||||||||||||||| |||||| ||||||||||||| |||||||||||||||||||||| Sbjct 1148 AAATGTCGAAGATGCTTGAAGAACGAAGCCAACTTGGAGAGCAACTGAGAGAGCTGGAAT 1207 Query 1198 CACATATAAGGCTGATCACGGAAGAGAAAGCTGAAACAGAGGAGAAACTTAGAGGAG-AA 1256 |||||||||||||||||| ||||||||||||||||||||||||||| |||||||||| || Sbjct 1208 CACATATAAGGCTGATCAAGGAAGAGAAAGCTGAAACAGAGGAGAAGCTTAGAGGAGGAA 1267 Query 1257 GCCGAGAAAATCAGCGTAATgagagatgagagcaatatgctaagagaagagattaggaag 1316 | ||||||||||||| ||||||||| ||||||||| ||||||||||||||||| ||||| Sbjct 1268 -CTGAGAAAATCAGCGGAATGAGAGACGAGAGCAATGTGCTAAGAGAAGAGATTGGGAAG 1326 Query 1317 agagaagagaagGTAAAGGAAATGGAAAAGCATATGGAGGAGCTTCACATGGATCAAGTG 1376 |||||||||||| ||||||||| |||||||||||||||||||||||||||||| |||||| Sbjct 1327 AGAGAAGAGAAGATAAAGGAAACGGAAAAGCATATGGAGGAGCTTCACATGGAGCAAGTG 1386 Query 1377 AGGCTGAGAAGACGGTCGAGTGAGCTTACAGAAGAAGTGGAAAGGACGAGAGTATCTGCA 1436 ||||||||||||||||| ||||||||||| ||||||||||||||||||||||| |||||| Sbjct 1387 AGGCTGAGAAGACGGTCAAGTGAGCTTACGGAAGAAGTGGAAAGGACGAGAGTGTCTGCA 1446 Query 1437 TCAGAAATGGCTGAGCAGAAAAGAGAAGCTATAAGGCAGCTTTGTATGTCTCTTGAGCAT 1496 || |||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| Sbjct 1447 TCGGAAATGGCTGAGCAGAAAAGAGAAGCTATAAGACAGCTTTGTATGTCTCTTGACCAT 1506 Query 1497 TACAGAGATGGATACGACAGGCTTTGGAGAGTTGTTGCAGGACATAA-AGGTAAGAGAGT 1555 ||||||||||| |||||||| |||||||||||||||||||||||||| || ||||||||| Sbjct 1507 TACAGAGATGGGTACGACAGACTTTGGAGAGTTGTTGCAGGACATAAGAG-TAAGAGAGT 1565 Query 1556 AGTGGTCTTAGCAACGTGAAGTGTAAGAACAATGA 1590 |||||||||| |||| ||||||||||||||||||| Sbjct 1566 AGTGGTCTTATCAACTTGAAGTGTAAGAACAATGA 1600 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 78513652380 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5