BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg481969
Length=1642
Score E
Sequences producing significant alignments: (Bits) Value
AT2G30550.2 | Symbols: | alpha/beta-Hydrolases superfamily pro... 2453 0.0
AT1G06800.1 | Symbols: PLA-I{gamma}1 | alpha/beta-Hydrolases su... 939 0.0
> AT2G30550.2 | Symbols: | alpha/beta-Hydrolases superfamily protein
| chr2:13014848-13017153 FORWARD LENGTH=1774
Length=1774
Score = 2453 bits (1328), Expect = 0.0
Identities = 1546/1649 (94%), Gaps = 23/1649 (1%)
Strand=Plus/Plus
Query 4 CGAAATCAAGCTTTTGAAGCTTCTCAACAATGGCGACTATTCCTTCCCACAACAACCTTC 63
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 8 CGAAATCAAGCTTTTGAAGCTTCTCAACAATGGCGGCTATTCCTTCCCACAACAACCTTC 67
Query 64 TTACCATCAACCACAAAAACTCCATAACCGGTCACCACTCTTCTTCGGTTAATACCAAAT 123
|||||||||||||||||||||||||||||||| |||||||| | |||||| |||
Sbjct 68 TTACCATCAACCACAAAAACTCCATAACCGGT------TCTTCTTCCCTAAATACC-AAT 120
Query 124 TT-TCAGAAATCAATTTTCCCGCCAAATTCCAAGTAGCTACGAGAGCTTTGTCCAGAACC 182
|| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 121 TTCTCAGAAATCAATTTTCCCGCCAAATTCCGAGTAGCTACGAGAGCTTTGTCCAGAACC 180
Query 183 GACGAGTCTTCTCTATCCGCCGTGATTTCTCGTCTCGAGCGCGAAAGGCGGGAAAGACAA 242
|||||||| ||| ||||||||||||||||||| |||||||| ||||||||||||||||||
Sbjct 181 GACGAGTCGTCTTTATCCGCCGTGATTTCTCGCCTCGAGCGAGAAAGGCGGGAAAGACAA 240
Query 243 GG--T-TTAATCGACGAAGCCGAAGGAG-TGGGAGAACGGTGGTTGACGGCGGAGGATAT 298
|| | |||||||| ||||| ||||||| | ||||||| ||| |||||||||| |||||
Sbjct 241 GGTTTATTAATCGAGGAAGCGGAAGGAGCT-GGAGAACTATGGATGACGGCGGAAGATAT 299
Query 299 TCGCCGGCGTGATaaaaaaaCCGAAGAAGAGAGAAGACTAAGAGACACGTGGCGTAAGAT 358
||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 300 TCGCCGGCGAGATAAAAAAACCGAAGAAGAAAGAAGACTAAGAGACACGTGGCGTAAGAT 359
Query 359 CCAAGGAGAAGACGATTGGGCCGGGTTAATGGATCCAATGGATCCAATTCTTAGATCGGA 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 360 CCAAGGAGAAGACGATTGGGCCGGGTTAATGGATCCAATGGATCCAATTCTTAGATCGGA 419
Query 419 GCTAATCCGTTACGGCGAAATGGCTCAAGCTTGTTACGACGCTTTCGATTTCGATCCCGC 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 420 GCTAATCCGTTACGGCGAAATGGCTCAAGCTTGTTACGACGCTTTCGATTTCGATCCCGC 479
Query 479 TTCGAAATACTGCGGCACCTCAAGATTCTCGCGGCTCGAGTTCTTCGATTCTCTCGGAAT 538
||| ||||||||||||||||| || ||| |||| ||||||||||||||||||||||||||
Sbjct 480 TTCCAAATACTGCGGCACCTCCAGGTTCACGCGACTCGAGTTCTTCGATTCTCTCGGAAT 539
Query 539 GATCGATTCCGGTTACGAGGTGGCGCGTTACCTCTACGCGACGTCGAATATCAATCTCCC 598
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 540 GATCGATTCCGGTTACGAGGTGGCGCGTTACCTCTACGCGACGTCGAACATCAATCTCCC 599
Query 599 GAACTTCTTCTCGAAATCGCGGTGGTCTAAAGTTTGGAGCAAAAACGCTAATTGGATGGG 658
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 600 GAACTTCTTCTCGAAATCGCGGTGGTCTAAAGTCTGGAGCAAAAACGCTAATTGGATGGG 659
Query 659 ATACGTCGCTGTCTCCGACGACGAAACGTCTCGTAACCGCCTCGGCCGCCGTGATATCGC 718
||||||||| || || ||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 660 ATACGTCGCCGTTTCAGACGACGAAACGTCTCGTAACCGACTCGGCCGCCGTGATATCGC 719
Query 719 GATTGCGTGGAGAGGAACCGTCACGAAACTAGAGTGGATCGCGGATCTAAAGGATTATTT 778
||||||||||||||||||||| |||||||| || ||||||||||||||||||||||||||
Sbjct 720 GATTGCGTGGAGAGGAACCGTTACGAAACTTGAATGGATCGCGGATCTAAAGGATTATTT 779
Query 779 AAAACCAGTATCCGGTAATAATATCCGGTGCCCCGACCCGGCCGTTAAAGTCGAATCCGG 838
|||||| ||| ||| || || ||||| ||||||||||||||||||||||||||||||||
Sbjct 780 AAAACCGGTAACCGAAAACAAGATCCGATGCCCCGACCCGGCCGTTAAAGTCGAATCCGG 839
Query 839 ATTCTTGGATCTCTACACAGACAAAGACAAAACCTGCAAATTCGCAAAATTCTCGGCGCG 898
|||||| ||||||||||| |||||||||| ||||||||||||||| | |||||| |||||
Sbjct 840 ATTCTTAGATCTCTACACTGACAAAGACACAACCTGCAAATTCGCGAGATTCTCAGCGCG 899
Query 899 TGAGCAGATTTTAACGGAGGTGAAGCG-TCTGGTGGAA-ATATACGGCGATGACGATGAC 956
||| |||||||||||||||||||| || | | |||||| | | ||||||| ||||||||
Sbjct 900 TGAACAGATTTTAACGGAGGTGAAACGGT-TAGTGGAAGA-ACACGGCGACGACGATGAT 957
Query 957 TCCGATTTAAGCATCACCGTGACGGGACACAGTCTCGGCGGCGCGTTAGCGATGTTAAGC 1016
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 958 TCCGATTTAAGCATCACCGTGACGGGACACAGTCTCGGCGGCGCGTTAGCGATATTAAGC 1017
Query 1017 GCGTACGATATAGCGGAGATGGGATTGAATCGGAGTAAGAACGGGAAAGTGATTCCGGTG 1076
||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||
Sbjct 1018 GCGTACGATATAGCGGAGATGAGATTGAATCGGAGTAAGAAAGGGAAAGTGATTCCGGTG 1077
Query 1077 ACGGTGTTGACTTACGGAGGACCGAGAGTGGGGAACGTGAAGTTTAAGGATAGGATGGAG 1136
||||||||||| ||||||||||||||||| |||||||| | ||||| ||| |||||||||
Sbjct 1078 ACGGTGTTGACATACGGAGGACCGAGAGTTGGGAACGTTAGGTTTAGGGAGAGGATGGAG 1137
Query 1137 GAGCTTGG-AGTGAAGGTGCTGAGAGTGGTGAATGTTCACGACGTCGTTCCTAAGTCGCC 1195
|| |||| |||||| ||| ||||||| ||||||||||||||||| ||||| ||||||||
Sbjct 1138 GAA-TTGGGAGTGAAAGTGATGAGAGTAGTGAATGTTCACGACGTGGTTCCCAAGTCGCC 1196
Query 1196 GGGATTGTTTTTGAACGAGAGTCGGCCTCACGCGCTGATGAAGATCGCGGAGGGTTTGCC 1255
|||||||||||||||||||||| | |||||||||||||||||||| |||||||| |||||
Sbjct 1197 GGGATTGTTTTTGAACGAGAGTAGACCTCACGCGCTGATGAAGATAGCGGAGGGGTTGCC 1256
Query 1256 GTGGTGTTATAGCCACGTGGGGGAGGAGCTGGCGTTGGATCATCAAAACTCGCCGTTTCT 1315
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1257 GTGGTGTTATAGCCACGTGGGGGAGGAGCTGGCGTTGGATCATCAGAACTCGCCGTTTCT 1316
Query 1316 TAAACCTTCCGTTGATCTTTCTACTTCCCATAATCTTGAAGCTATGCTTCATCTT-CTTG 1374
|||||||||||||||| |||||||| | |||||||||||||||||||||||| || ||||
Sbjct 1317 TAAACCTTCCGTTGATGTTTCTACTGCTCATAATCTTGAAGCTATGCTTCAT-TTACTTG 1375
Query 1375 ACGGGTATCATGGAAAAGGAGAGAGATTTGTGCTGTCGAGTGGGAGAGACCATGCGCTAG 1434
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1376 ACGGGTATCATGGAAAAGGAGAGAGATTTGTGCTGTCGAGTGGGAGAGACCATGCGCTAG 1435
Query 1435 TGAACAAAGCGTCGGACTTTTTGAAAGAGCACTTACAAATTCCACCGTTTTGGCGTCAAG 1494
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1436 TGAACAAAGCGTCGGACTTTTTGAAAGAGCATTTACAAATTCCACCGTTTTGGCGTCAAG 1495
Query 1495 ACGCGAACAAAGGAATGGTTCGGAATAGTGAAGGTCGTTGGATTCAAGCCGAGCGACTCC 1554
||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| ||||
Sbjct 1496 ACGCGAATAAAGGAATGGTTCGGAACAGTGAAGGTCGTTGGATTCAAGCCGAGCGTCTCC 1555
Query 1555 GTTCTGAGGATCATCATTCTCCTGACATCCACCACCATCTCTCTCAGCTCCGTCTTGATC 1614
||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1556 GTTTTGAGGATCATCATTCTCCTGATATCCACCACCATCTCTCTCAGCTCCGTCTTGATC 1615
Query 1615 ATCCTCT-TTAATCACACACACATATATA 1642
||||| | |||||||||| ||||||||||
Sbjct 1616 ATCCT-TGTTAATCACACGCACATATATA 1643
> AT1G06800.1 | Symbols: PLA-I{gamma}1 | alpha/beta-Hydrolases
superfamily protein | chr1:2089417-2091686 REVERSE LENGTH=1912
Length=1912
Score = 939 bits (508), Expect = 0.0
Identities = 1063/1327 (80%), Gaps = 53/1327 (4%)
Strand=Plus/Plus
Query 284 GACGGCGGAGGATATTCGCCGGCGTGATaaaaaaaCCGAAGAA--GAGAGAAGACTAAGA 341
|||||| ||||| |||||||| || ||| | || | ||||| | || || | |||
Sbjct 444 GACGGCAGAGGACATTCGCCGACGGGATGGAGAAGCAAAAGAATCCA-AG-AGGTTGAGA 501
Query 342 GACACGTGGCGTAAGATCCAAGGAGAAGACGATTGGGCCGGGTTAATGGATCCAATGGAT 401
||||||||||| ||||||||||| ||||| ||||||||||||||||||||||| |||||
Sbjct 502 GACACGTGGCGGAAGATCCAAGGGGAAGATGATTGGGCCGGGTTAATGGATCCGATGGAC 561
Query 402 CCAATTCTTAGATCGGAGCTAATCCGTTACGGCGAAATGGCTCAAGCTTGTTACGACGCT 461
|| |||| ||||| ||||| ||||| ||||| |||||||| || || |||||||||||
Sbjct 562 CCGGTTCTGAGATCTGAGCTGATCCGGTACGGAGAAATGGCCCAGGCCTGTTACGACGCC 621
Query 462 TTCGATTTCGATCCCGCTTCGAA-ATACTGCGGCACCT-CAAGATTCTCGCGGC-TCGAG 518
|||||||||||||| ||| || |||||||| | || | |||||| |||| | || |
Sbjct 622 TTCGATTTCGATCCATTTTC-AAGGTACTGCGGGAGCTGC-AGATTCACGCGCCGTC-AC 678
Query 519 TTCTTCGATTCTCTCGGAATGATCGATTCCGGTTACGAGGTGGCGCGTTACCTCTACGCG 578
|| |||||||| ||||| || |||||||| || || |||||||||||||| |||||||||
Sbjct 679 TTGTTCGATTCGCTCGGGATAATCGATTCTGGCTATGAGGTGGCGCGTTATCTCTACGCG 738
Query 579 ACGTCGAATATCAATCTCCCGAACTTCTTCTCGAAATCGCGGTGGTCTAAAGTTTGGAGC 638
|||||||| ||||| || || || |||||||| |||||| | ||||| || || ||||||
Sbjct 739 ACGTCGAACATCAACCTTCCTAATTTCTTCTCCAAATCGAGATGGTCCAAGGTGTGGAGC 798
Query 639 AAAAACGCTAATTGGATGGGATACGTCGCTGTCTCCGACG---ACGAAACGTCTCG-TAA 694
|| ||||| ||||||||||| ||||| ||||| ||||||| ||||| | | || |
Sbjct 799 AAGAACGCCAATTGGATGGGTTACGTGGCTGTATCCGACGACAACGAAGCCACGCGCT-G 857
Query 695 CCGCCTCGGCCGCCGTGATATCGCGATTGCGTGGAGAGGAACCGTCACGAAACTAGAGTG 754
||| | || ||||| || || || || || |||||||| || |||||| || |||||
Sbjct 858 CCGTTTAGGACGCCGCGACATTGCCATCGCCTGGAGAGGGACTGTCACGCGGCTCGAGTG 917
Query 755 GATCGCGGATCTAAAGGATTAT-TTAAAACCAGTATCCGGTAA-TAATATCCGGTGCCCC 812
||| || ||||| ||||||| | | ||||| |||||||| || || |||| ||||||
Sbjct 918 GATAGCTGATCTCAAGGATT-TCCTCAAACCGGTATCCGGAAACGGAT-TCCGATGCCCC 975
Query 813 GACCCGGCCGTTAAAGTCGAATCC-GGATTCTTGGATCTCTACACAGACAAAGACAAAAC 871
||||||||||| |||| ||||||| || ||| ||||||| ||||| |||||||| | | |
Sbjct 976 GACCCGGCCGTAAAAGCCGAATCCGGGTTTC-TGGATCTATACACGGACAAAGATACATC 1034
Query 872 CTGCAAATTCGCAAAATTCTCGGCGCGTGAGCAGATT-TTAACGGAGGTGAAGCGTCTGG 930
|||||| ||| | |||||||||||||| |||||| || || ||||| |||||||| ||||
Sbjct 1035 CTGCAATTTCTCCAAATTCTCGGCGCGAGAGCAGGTTCTT-ACGGAAGTGAAGCGGCTGG 1093
Query 931 TGGAAATATACGGCGATGACG-ATGACTCCGATTTAAGCATCACCGTGACGGGACACAGT 989
|||||| |||||||| || | | || || | ||||||||||||||||||||||||
Sbjct 1094 TGGAAAGGTACGGCGACGAGGAAGGA-GAAGAACTGAGCATCACCGTGACGGGACACAGT 1152
Query 990 CTCGGCGGCGCGTTAGCGATGTTAAGCGCGTACGATATAGCGGAGATGGGAT-TGAATCG 1048
|||||||| ||| | ||| || ||||||||||||| | ||||||||||| | |||| |
Sbjct 1153 CTCGGCGGTGCGCTGGCGGTGCTAAGCGCGTACGACGTGGCGGAGATGGG-TGTGAA-CA 1210
Query 1049 GAGTAAG-AACGGGAAAGTGATTCCGGTGACGGTGTTGACTTACGGAGGACCGAGAGTGG 1107
|| || || || ||||||||||||||||||| ||| || |||||||||||| |||| |
Sbjct 1211 GAACGAGGAAAGGAAAAGTGATTCCGGTGACGGCGTTCACGTACGGAGGACCGCGAGTTG 1270
Query 1108 GGAACGTGAAGTTT-AAGGATAGGATGGAGGAGCTTGG-AGTGAAGGTGCTGAGAGTGGT 1165
||||| | | || ||||| ||||| ||| | |||| |||||||||| ||||||||||
Sbjct 1271 GGAACATTC-GATTCAAGGAGAGGATTGAGAAA-TTGGGAGTGAAGGTGTTGAGAGTGGT 1328
Query 1166 GAATGTTCACGACGTCGTTCCTAAGTCGCCGGGATTGTTTTTGAACGAGAGT-CGGCCTC 1224
||| | ||||||||||| | || ||||||||| ||||| |||||||| || || || |
Sbjct 1329 GAACGAGCACGACGTCGTGGCGAAATCGCCGGGACTGTTTCTGAACGAGCGTGCG-CCAC 1387
Query 1225 ACGCGCTGATGAAGATCG-CGG-AGGGTTTGCCGTGGTGTTATAGCCACGTGGGGGAGGA 1282
| ||||| ||||| || | ||| ||| || ||||||||| |||||||||||||| || |
Sbjct 1388 AGGCGCTAATGAA-ATTGGCGGGAGGATT-GCCGTGGTGCTATAGCCACGTGGGAGAA-A 1444
Query 1283 -GCTGGCGTTGGATCATCAAAACTCGCCGTTTCTTAAACCTTCCGTTGATCTTTCTACTT 1341
|||| ||||||||||||| || || ||||| ||||| || ||||||||||||||||
Sbjct 1445 TGCTGCCGTTGGATCATCAGAAGTCTCCGTTCCTTAAGCCCACCGTTGATCTTTCTACGG 1504
Query 1342 CCCATAATCTTG-AAGCTATGCTTCATCTTCTTGACGGGTATCATGGAAAAGGAGAGAGA 1400
| ||||| |||| ||||| | || ||||| ||||||||||||||||| |||||| |||||
Sbjct 1505 CTCATAA-CTTGGAAGCTCTCCTCCATCTCCTTGACGGGTATCATGGGAAAGGACAGAGA 1563
Query 1401 TTTGTGCTGTCGAGTGGGAGAGA-CCATGCGCTAGTGAACAAAGCGTCGGACTTTTTGAA 1459
|||||| | || ||||||||||| ||| ||| ||||||||||||| || || ||||||||
Sbjct 1564 TTTGTGTTATCAAGTGGGAGAGATCCA-GCGTTAGTGAACAAAGCATCTGATTTTTTGAA 1622
Query 1460 AGAGCACTTACAAATTCCA-CCGTT-TTGGCGTCAAGACGCGAACAAAGGAATGGTTCGG 1517
||| || || || ||| || || |||||| |||||||| |||||||| ||||| ||
Sbjct 1623 AGACCATTT-CATGGTCCCTCC-TTATTGGCGCCAAGACGCAAACAAAGGGATGGTGAGG 1680
Query 1518 AATAGTGAAGGTCGTTGGATTCAAGCC-GAGCG-ACTCCGTTCTGAGGATCATCATTCTC 1575
|| | ||| || |||||||||||| || || || | ||||| | || ||||| ||| |||
Sbjct 1681 AACACTGACGGCCGTTGGATTCAA-CCTGATCGCA-TCCGTGCAGATGATCAACATGCTC 1738
Query 1576 CTGACAT 1582
|||||||
Sbjct 1739 CTGACAT 1745
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 81124080720
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5