BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg481989 Length=1492 Score E Sequences producing significant alignments: (Bits) Value AT2G30720.1 | Symbols: | Thioesterase/thiol ester dehydrase-is... 2237 0.0 > AT2G30720.1 | Symbols: | Thioesterase/thiol ester dehydrase-isomerase superfamily protein | chr2:13089369-13091687 REVERSE LENGTH=1752 Length=1752 Score = 2237 bits (1211), Expect = 0.0 Identities = 1384/1466 (94%), Gaps = 17/1466 (1%) Strand=Plus/Plus Query 30 TCGTAGATCCATGAGATCTTCAGCGGGAAAGCTTCTCTCCCATTCTCTACGGAGAAACCG 89 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 140 TCGTAGATCCATGAGATCTTCAGCGGGAAAGCTTCTCTCCCATTCTCTACGGAGAAACCG 199 Query 90 CGGGAAACATGTTGCCGGAGGCCATGGATTTTGGATTCCGGCTACAAGGTCGTCATCGAA 149 |||||||| || || | |||||||||||||||||||||| ||||| ||| ||| Sbjct 200 CGGGAAAC---TT---GG-TG--ATGGATTTTGGATTCCGGCTACGAGGTC-TCA--GAA 247 Query 150 GATGTTGATTTCGACGGTACCGTCAGATGAAAAACCTGATCAAAATTCAATCGATGCAGG 209 ||||| || |||||||||||||||||||||||| |||||||||||||| ||||||||||| Sbjct 248 GATGTGGAATTCGACGGTACCGTCAGATGAAAATCCTGATCAAAATTCGATCGATGCAGG 307 Query 210 ATCTTCAATGCGGAAACCAATTAGCTTATGGCCTGGAATGTATCATTCTCCGGTGACTAA 269 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 308 ATCTTCAATGCGGAAACCAATTAGCTTATGGCCTGGAATGTATCATTCTCCGGTGACTAA 367 Query 270 TGCGCTTTGGGAAGCTAGACGTAATATGTTCGAAAGCCCTACCGGAGACGACGATTCTCT 329 |||||||||||||||| | |||||||||||||||| |||||||||||||||| ||||| Sbjct 368 TGCGCTTTGGGAAGCTCGTCGTAATATGTTCGAAATTCCTACCGGAGACGACGCTTCTCA 427 Query 330 GTCAAAATTGACGGCTAAGTCTCCGTCGCGAAGCCGGACTTCGATTCTCTACAAGTTTTC 389 |||||||||||||||||| |||||||| |||||||| || || |||||||| |||||||| Sbjct 428 GTCAAAATTGACGGCTAAATCTCCGTCTCGAAGCCGAACGTCAATTCTCTATAAGTTTTC 487 Query 390 TTCTGATTTTGTTCTTAGAGAACAGTATAGGAATCCTTGGAATGAGATTCGTACTGGTAA 449 |||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| Sbjct 488 TTCTGATTTTGTTCTTCGAGAACAATATAGGAATCCTTGGAATGAGATTCGTACTGGTAA 547 Query 450 ATTGGTTGAAGATCTTGATGCTCTTGCTGGAACCATCTCCTTCAAGCATTGTGGTGGTGA 509 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 548 ATTGGTTGAAGATCTTGACGCTCTTGCTGGAACCATCTCCTTCAAGCATTGTGGTGGTGA 607 Query 510 TAGCAGTGCGAGATCGATGATTTTGGTGACTGCTTCAGTGGATAGGATTATCATGAAAAG 569 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 608 CAGCAGTGCGAGATCGATGATTTTGGTGACTGCTTCAGTGGATAGGATTATCATGAAAAG 667 Query 570 ACCAATTCGTGTTGATGTTGACCTCAGTATAGTTGGCGCTGTTACATGGGTTGGGAGATC 629 ||| |||||||| ||| |||||| ||||||||||| ||||||||||||||||| ||||| Sbjct 668 ACCTATTCGTGTAGATACTGACCTTAGTATAGTTGGTGCTGTTACATGGGTTGGTAGATC 727 Query 630 ATCCATGGAGATGCAATTACAAGTACTCCAAAGTCAAGATACCATCAATTCCGCTGAGTC 689 |||||||||||||||||||||||||||||||| ||||||||||| ||| ||| ||||||| Sbjct 728 ATCCATGGAGATGCAATTACAAGTACTCCAAATTCAAGATACCAACAACTCCTCTGAGTC 787 Query 690 GGTTGCCCTTGAAGCAAACTTTACATTTGTGGCTCGAGATGCCCAGACAGGCAAGTCAAC 749 ||||||||||||||||||||||||||| |||||||| ||||| ||||||||||||||| | Sbjct 788 GGTTGCCCTTGAAGCAAACTTTACATTCGTGGCTCGGGATGCTCAGACAGGCAAGTCAGC 847 Query 750 TCCAATTAACCAAGTCGTGCCTGAAACTGAGCATGAAAAATTTCTGTGGAAAGAGGCAGA 809 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 848 TCCAATTAACCAAGTCGTGCCAGAAACTGAGCATGAAAAATTTCTGTGGAAAGAGGCAGA 907 Query 810 AGAGAGGAATAAACTACGAAAACAAAAGAGAGCACAAGGTAAAGAAGAGCATGAGAAGTT 869 ||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 908 AGAGAGGAACAAACTACGAAAACAAAAGAGAGCACAGGGTAAAGAAGAGCATGAGAAGTT 967 Query 870 GAAGGACTTAGAGAGGTTAAATGAGTTATTAGCAGAAGGACGAGTATTCCTGGACATGCC 929 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 968 GAAGGACTTAGAGAGGCTAAATGAGTTATTAGCAGAAGGACGAGTATTCCTGGACATGCC 1027 Query 930 GGCTCTTGCAGATCGGAACAGCATCCTAATTAAGGATACTTACCATGAAAACTCATTGAT 989 |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 1028 AGCTCTTGCAGATCGGAACAGCATCCTAATTAAGGATACTTCCCATGAAAACTCATTGAT 1087 Query 990 CTGCCAGCCACAGCAACGGAATATTCATGGCAGAATTTTTGGAGGCTTCTTGATGCGCAA 1049 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 1088 CTGCCAGCCACAGCAACGAAATATTCATGGCAGAATTTTTGGAGGCTTCTTGATGCGCAA 1147 Query 1050 AGCTTTTGAGCTGGCCTTCTCCAATGCTTACACCTTCGCTGGGGTTTCACCACGTTTTCT 1109 |||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 1148 AGCTTTTGAGTTGGCTTTCTCCAATGCTTACACCTTCGCTGGGGTTTCACCACGTTTTCT 1207 Query 1110 TGAAGTTGATCGCGTCGATTTTATCAAACCAGTAGATGTTGGAAATTTCCTTCGTTTCAA 1169 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 1208 CGAAGTTGATCGCGTCGATTTTATCAAACCAGTGGATGTTGGAAATTTCCTTCGTTTCAA 1267 Query 1170 ATCACGAGTATTGTACACAGAAGCTAAC-AGTTCTGCTGAACCGCTGATAAACATCGAGG 1228 ||||| ||||||||||||||||| ||| ||||| ||||||||||||||||||||||||| Sbjct 1268 GTCACGCGTATTGTACACAGAAGC-AACCAGTTCAGCTGAACCGCTGATAAACATCGAGG 1326 Query 1229 TTGTAGCTCATGTTACAAGTCCAGAGCTCAGGTCCAGCGAAGTCTCTAACAGGTTCTACT 1288 ||||||||||||||||||||||||||||||| |||||||||||||| |||||||| |||| Sbjct 1327 TTGTAGCTCATGTTACAAGTCCAGAGCTCAGATCCAGCGAAGTCTCCAACAGGTTTTACT 1386 Query 1289 TCACCTTCAGTGTGAGACCTGAGGCCATGAAAGATGGATTGAAAATAAGGAATGTGGTTC 1348 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 1387 TCACCTTCAGTGTGAGACCTGAGGCCATGAAAGATGGATTGAAAATAAGAAATGTGGTTC 1446 Query 1349 CAGCAACAGAAGAAGAAGCTAGAACG-GTAATCGAGCGCATGGACGCAGAGAGACCCATC 1407 |||||||||||||||||||||||| | || |||||||||||||||||||||||||||||| Sbjct 1447 CAGCAACAGAAGAAGAAGCTAGAA-GAGTGATCGAGCGCATGGACGCAGAGAGACCCATC 1505 Query 1408 TCATCGCCTTGACCGCGGCATTTGAACTGTTGATATCGGTAAACAAGAGAAACCC-AGTC 1466 |||| ||||||| || |||||||||| |||||| ||||||||||||||||| | |||| Sbjct 1506 TCATTGCCTTGATTGCCGCATTTGAACAGTTGATTTCGGTAAACAAGAGAAAACATAGTC 1565 Query 1467 TGACTAAAATATGAATAAGAAGCCAT 1492 ||||||| |||||||||||||||||| Sbjct 1566 TGACTAATATATGAATAAGAAGCCAT 1591 Score = 54.7 bits (29), Expect = 3e-06 Identities = 29/29 (100%), Gaps = 0/29 (0%) Strand=Plus/Plus Query 1 AAAAAATCACTGTAGCGTGATTAGCACTT 29 ||||||||||||||||||||||||||||| Sbjct 17 AAAAAATCACTGTAGCGTGATTAGCACTT 45 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 73593998970 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5