BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg482026
Length=2385
Score E
Sequences producing significant alignments: (Bits) Value
AT2G31020.1 | Symbols: ORP1A | OSBP(oxysterol binding protein)-... 3594 0.0
AT2G31030.1 | Symbols: ORP1B | OSBP(oxysterol binding protein)-... 1851 0.0
AT4G08180.1 | Symbols: ORP1C | OSBP(oxysterol binding protein)-... 1107 0.0
> AT2G31020.1 | Symbols: ORP1A | OSBP(oxysterol binding protein)-related
protein 1A | chr2:13201668-13204821 FORWARD LENGTH=2422
Length=2422
Score = 3594 bits (1946), Expect = 0.0
Identities = 2176/2288 (95%), Gaps = 11/2288 (0%)
Strand=Plus/Plus
Query 1 ATGTACGCCGCCACACCCGGAACTCCTTTCGGTTCCGCGAGGTCCCAACCTGTTATTACT 60
||||||||||||||||||| ||||||||||||||||||||| || ||||| ||||||||
Sbjct 1 ATGTACGCCGCCACACCCGAAACTCCTTTCGGTTCCGCGAGATCACAACCGGTTATTACC 60
Query 61 CGATCTGTCTCACAACGATATAACCATCCCTGTCAAACTAATAACCATCATCTCCTCCAC 120
||||||||||||||||||||||||||||| |||||| |||| |||||||||||||||||
Sbjct 61 CGATCTGTCTCACAACGATATAACCATCCAGGTCAAAGTAATCACCATCATCTCCTCCAC 120
Query 121 AGTCTCTCATTTAACCACCAGAACGTATTAGCCTTGCCGGCAGCGGCAAGGGAGCCGCCT 180
||||||||||||||||||||||||||| ||||||| |||||||| |||||||||||||||
Sbjct 121 AGTCTCTCATTTAACCACCAGAACGTACTAGCCTTACCGGCAGCAGCAAGGGAGCCGCCT 180
Query 181 GTGGATGTTAAAATTAACGATATCGCCGGGAATTCGATTG-CGGGAATATTGTACAAATG 239
|||||||| || |||||||||||||| ||||||||||||| |||| ||||||||||||||
Sbjct 181 GTGGATGTCAAGATTAACGATATCGCTGGGAATTCGATTGCCGGG-ATATTGTACAAATG 239
Query 240 GGTGAACTATGGGAAAGGATGGAGACCGAGATGGTTTGTTTTGCAAGATGGAGTGCTTTC 299
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 240 GGTGAACTATGGGAAAGGATGGAGACCAAGATGGTTTGTTTTGCAAGATGGAGTGCTTTC 299
Query 300 GTACTATAAGATCCATGGACCTGATAAGATCGTTGTTTTACGTGAGACTGAGAAAGGATC 359
|| ||||| ||| | ||||||||||||||||||||| | | ||||||||||||||||||
Sbjct 300 ATATTATAAAATCAAGGGACCTGATAAGATCGTTGTTATCCATGAGACTGAGAAAGGATC 359
Query 360 TAGGGTGATCGGAGAGGTGTCCACGCGTATGATCTCCAGGAATAACCGTCACGCCGGCAA 419
|| ||||||||||||| |||||| ||||||||||| |||||||| |||||||||| ||
Sbjct 360 AAGAGTGATCGGAGAGGAGTCCACACGTATGATCTCTAGGAATAAGCGTCACGCCGCCAC 419
Query 420 TAACAACACCAACCACCAGCTCCGCCGCAAGCCATTTGGCGAAGTCCACCTCAAGGTTTC 479
|||||||||||||||||||||||||||||||||||| |||||||| || |||||||||||
Sbjct 420 TAACAACACCAACCACCAGCTCCGCCGCAAGCCATTCGGCGAAGTTCATCTCAAGGTTTC 479
Query 480 ATCAATTCGGGAGAGTAGATCAGATGATAAGAGATTTTCAATATTCACCGGCACCAAGAG 539
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 480 ATCGATTCGGGAGAGTAGATCAGATGATAAGAGATTTTCAATATTCACCGGCACCAAGAG 539
Query 540 GCTTCACCTACGTGCAGAGACAAGAGAGGACAGAGAAGCTTGGATGGAGGCTTTGCAAGC 599
||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||
Sbjct 540 GCTTCACCTACGTGCAGAGACAAGAGAGGACAGAGAAGCTTGGATAGAGGCTTTACAAGC 599
Query 600 TGTCAAAGAAATGTTTCCAAGAATGTCAAACTGCGAGTTAATGGCACCGACCAACAACTT 659
||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 600 TGTCAAAGATATGTTTCCAAGAATGTCAAACTGCGAGTTGATGGCACCGACCAACAACTT 659
Query 660 AGACATCTCGATAGAGAAGCTTAGGCTGAGATTGGTTGAGGAAGGAGTGAGTGAGTCAGC 719
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 660 AGACATCTCGATAGAGAAGCTTAGGCTGCGATTGGTTGAGGAAGGAGTGAGTGAGTCAGC 719
Query 720 CATTCAAGACTGCGAACAAATCACGAGGTCTGAGTTCTCGGCAATTCAGAGCCAGCTTTT 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 720 CATTCAAGACTGCGAACAAATCACGAGGTCTGAGTTCTCGGCAATTCAGAGCCAGCTTTT 779
Query 780 GCTTCTTAAACAAAAGCAATGGCTTCTCATTGATACACTCAGGCAACTAGAGACAGAAAA 839
|||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| ||
Sbjct 780 GCTTCTTAAACAAAAGCAATGGCTTCTCATTGATACACTCAGACAATTAGAGACAGAGAA 839
Query 840 AGTAGATCTCGAGAACACGGTTGTAGATGAGACTCAACGACAAGTTGACAACGAAGACTC 899
||||||| | || ||||||||||||||||||||||||||||||| || ||||| ||||||
Sbjct 840 AGTAGATTTGGAAAACACGGTTGTAGATGAGACTCAACGACAAGCTGGCAACGGAGACTC 899
Query 900 AGAAGGAACTAAT-AGTGAATCCGATGATGATAATGAACAATTTGATGAGGCTGAGGAGG 958
||||| ||| ||| |||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 900 AGAAGAAAC-AATTAGTGAATCTGATGATGATAATGAACAATTTGATGAGGCTGAGGAGG 958
Query 959 AAATTGATACATGTGACTCTCATTCTTCAAGTTCATTCAAAAGTATTGGATCCGTTTTTC 1018
|||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 959 AAATGGATACATGTGACTCTCTTTCTTCAAGTTCATTCAAAAGTATTGGATCCGTTTTTC 1018
Query 1019 GTACATCATCATTCTCTTCAGATGATGATGGGA-TTGCTAATGGTTTTGAGTCAGA-A-- 1074
| ||||||||||||||||||||||||||||| | || ||||||||||||||||||| |
Sbjct 1019 GCACATCATCATTCTCTTCAGATGATGATGG-ACTTACTAATGGTTTTGAGTCAGAGAAT 1077
Query 1075 GATGATGTTGATCCTTCTATCAAGTCTATTGGATTTAACTATCCTCATGTCAAACGACGA 1134
|||||||||||||||||||||||| ||||||||||||||||||| ||||||||| |||||
Sbjct 1078 GATGATGTTGATCCTTCTATCAAGACTATTGGATTTAACTATCCACATGTCAAAAGACGA 1137
Query 1135 AAGAAGTTACCTGAACCGGTTGAAAAAGAGAAAAGTGTTAGCCTTTGGTCAATGATCAAA 1194
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1138 AAGAAGTTACCTGATCCGGTTGAAAAAGAGAAAAGTGTTAGCCTTTGGTCAATGATCAAA 1197
Query 1195 GACAACATTGGCAAGGATCTCACAAAAGTTTGTCTTCCTGTTTACTTCAATGAGCCTTTA 1254
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1198 GACAACATTGGCAAGGATCTCACAAAAGTTTGTCTTCCTGTCTACTTCAATGAGCCTTTA 1257
Query 1255 TCTTCTCTACAAAAATGCTTTGAAGATTTGGAGTATTCATATCTTCTTGATCAAGCATCT 1314
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1258 TCTTCTCTACAAAAATGCTTTGAAGATTTGGAGTATTCATATCTTCTTGATCAAGCTTCT 1317
Query 1315 GAATGGGGGAAAAAGGG-CAATAACCTCATGAGGATTCTGAATGTAGCTGCATTTGCTGT 1373
|||||||| ||| |||| ||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1318 GAATGGGG-AAAGAGGGGCAATAACCTCATGAGGATTCTGAATGTAGCTGCATTTGCCGT 1376
Query 1374 ATCCGGTTATGCATCAACCGAAGGAAGAATATGCAAACCTTTTAATCCAATGTTAGGTGA 1433
||| |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct 1377 ATCTGGTTATGCATCAACTGAAGGAAGAATTTGCAAACCTTTTAATCCAATGTTAGGTGA 1436
Query 1434 AACATATGAGGCTGATTATCCCGATAAAGGCCTTCGATTTTTCTCGGAAAAGGTGAGTCA 1493
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1437 AACATATGAGGCTGACTATCCCGATAAAGGCCTTCGATTTTTCTCGGAAAAGGTGAGTCA 1496
Query 1494 TCATCCTATGATTGTGGCATGCCATTGTGATGGCACCGGATGGAAATTTTGGGGAGATAG 1553
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1497 TCATCCTATGATTGTGGCATGTCATTGTGATGGCACCGGATGGAAATTTTGGGGAGATAG 1556
Query 1554 TAATTTAAAAAGCAAATTTTGGGGTCGATCAATTCAGCTTGATCCTATTGGTTTGTTGAC 1613
|| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1557 CAACTTAAAAAGCAAATTTTGGGGTCGATCAATTCAACTTGATCCTATTGGTTTGTTGAC 1616
Query 1614 TTTGCAATTTGATGATGGTGAAATTGTACAATGGAGCAAGGTGACTACATCAATATACAA 1673
||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||
Sbjct 1617 TTTGCAATTTGATGATGGTGAAATTGTGCAATGGAGTAAGGTGACTACATCAATATACAA 1676
Query 1674 TCTCATACTTGGTAAATTGTATTGTGATCACTATGGGACAATGCGGATTGAAGGTAACGG 1733
||||||||||||||||||||||||||||||||| ||||||||| ||||||||| |||||
Sbjct 1677 TCTCATACTTGGTAAATTGTATTGTGATCACTACGGGACAATGAAGATTGAAGGCAACGG 1736
Query 1734 CGAATACTCATGTAAACTTAAATTTAAGGAACAGTCGATGATCGATAGAAATCCTCATCA 1793
||||| ||||||||||||||||| ||||||||||||||||||||||||||||| |||||
Sbjct 1737 TGAATATTCATGTAAACTTAAATTCAAGGAACAGTCGATGATCGATAGAAATCCGCATCA 1796
Query 1794 AGTTCAAGGTATAGTAGAAGACAAAAATGGAAAAACAGTGGCTAAGTTGTTTGGAAAATG 1853
|||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||
Sbjct 1797 AGTTCAAGGTATAGTAGAAGACAAGAATGGAAAAACAGTGGCTAGGTTGTTTGGAAAATG 1856
Query 1854 GGATGAGAGTATGCACTATGTGATGGTCAATCAAGGAAGGGTGAATGAATCTCATCTTTT 1913
|||||||||||| |||||||||||||| ||||||||| |||||||||||| |||||| |
Sbjct 1857 GGATGAGAGTATACACTATGTGATGGTTGATCAAGGAAAGGTGAATGAATCCCATCTTCT 1916
Query 1914 GTGGAAACGAAACAAACCTCCCGAAAACCCGACAAAGTATAATCTAACACGGTTTGGGAT 1973
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1917 GTGGAAACGAAACAAACAGCCCGAAAACCCGACAAAGTATAATCTAACACGGTTTGGGAT 1976
Query 1974 CACATTAAACGAGCTAACGCCTGGTTTAAAGGAGAAGTTGCCACCAACAGATTCAAGACT 2033
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1977 CACATTAAACGAGCTCACGCCTGGTTTAAAGGAGAAGTTGCCACCAACAGATTCAAGACT 2036
Query 2034 TAGACCAGACCAAAGGTATTTGGAGAAGGGAGAGTTTGAAATGGGAAATGCGGAGAAGTT 2093
|||||| ||||| |||||||| ||||||||||||| |||||||||||| || ||||||||
Sbjct 2037 TAGACCGGACCAGAGGTATTTAGAGAAGGGAGAGTATGAAATGGGAAACGCAGAGAAGTT 2096
Query 2094 GAGGTTGGAACAAAGACAAAGACAGGCGAGAGAGATGCAAGAGAGAGGTTGGAAACCAAA 2153
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2097 GAGGTTGGAACAAAGACAAAGACAGGCGAGAGAGATGCAAGAGAGAGGTTGGAAACCAAA 2156
Query 2154 GTGGTTTAGAAAAGAGAAAGGAAGTGAGACTTATAGATACGTTGGAGGTTATTGGGAAGC 2213
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 2157 GTGGTTTAGAAAAGAGAAAGGAAGTGAGACTTATAGATACATTGGAGGTTATTGGGAAGC 2216
Query 2214 TCGAGATTCTGGTCGTTGGGATGATTGTCCTGACATCTTTGGTCAAGTTCACCAATCCAT 2273
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2217 TCGAGATTCTGGTAGTTGGGATGATTGTCCTGACATCTTTGGTCAAGTTCACCAATCCAT 2276
Query 2274 CAAGTAAC 2281
||||||||
Sbjct 2277 CAAGTAAC 2284
> AT2G31030.1 | Symbols: ORP1B | OSBP(oxysterol binding protein)-related
protein 1B | chr2:13206004-13207815 FORWARD LENGTH=1470
Length=1470
Score = 1851 bits (1002), Expect = 0.0
Identities = 1156/1231 (94%), Gaps = 8/1231 (1%)
Strand=Plus/Plus
Query 1039 GATGATGATGGGATTGCTAATGGTTTTGAGTCAGAAGATGATGTTGATCCTTCTATCAAG 1098
||||||||| ||||| ||||||| ||||||||||| ||||| ||||||||||||||||||
Sbjct 241 GATGATGATTGGATTACTAATGGCTTTGAGTCAGATGATGACGTTGATCCTTCTATCAAG 300
Query 1099 TCTATTGGATTTAACTATCCTCATGTCAA-ACGACGAAAGAAGTTACCTGAACCGGTTGA 1157
|||||||||||||||||||||||||||| | ||||||| || |||||||| ||||||||
Sbjct 301 ACTATTGGATTTAACTATCCTCATGTCAATA-GACGAAATAAATTACCTGATCCGGTTGA 359
Query 1158 AAAAGAGAAAAGTGTTAGCCTTTGGTCAATGATCAAAGACAACATTGGCAAGGATCTCAC 1217
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 360 AAAAGAGAAAAGTGTTAGCCTTTGGTCAATGATCAAAGACAACATTGGCAAGGATCTTAC 419
Query 1218 AAAAGTTTGTCTTCCTGTTTACTTCAATGAGCCTTTATCTTCTCTACAAAAATGCTTTGA 1277
|||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||
Sbjct 420 TAAAGTTTGTCTTCCTGTTTACTTCAATGAGCCACTATCCTCTCTACAAAAATGCTTTGA 479
Query 1278 AGATTTGGAGTATTCATATCTTCTTGATCAAGCATCTGAATGGGGGAAAAAGGG-CAATA 1336
||||||||||||||||||||||||||||||||| ||||||||||| |||||||| |||||
Sbjct 480 AGATTTGGAGTATTCATATCTTCTTGATCAAGCTTCTGAATGGGG-AAAAAGGGGCAATA 538
Query 1337 ACCTCATGAGGATTCTGAATGTAGCTGCATTTGCTGTATCCGGTTATGCATCAACCGAAG 1396
|||| ||||||||| ||||||||||||||||||||||||| |||||||||||||| |||
Sbjct 539 ACCTTATGAGGATTTTGAATGTAGCTGCATTTGCTGTATCTGGTTATGCATCAACTAAAG 598
Query 1397 GAAGAATATGCAAACCTTTTAATCCAATGTTAGGTGAAACATATGAGGCTGATTATCCCG 1456
||||||| |||||||| ||||||||||||||||| |||||||| ||||||||||||||||
Sbjct 599 GAAGAATTTGCAAACCCTTTAATCCAATGTTAGGGGAAACATACGAGGCTGATTATCCCG 658
Query 1457 ATAAAGGCCTTCGATTTTTCTCGGAAAAGGTGAGTCATCATCCTATGATTGTGGCATGCC 1516
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
Sbjct 659 ATAAAGGCCTTCGATTTTTCTCGGAAAAGGTAAGTCATCATCCTATGATTGTGGCATGTC 718
Query 1517 ATTGTGATGGCACCGGATGGAAATTTTGGGGAGATAGTAATTTAAAAAGCAAATTTTGGG 1576
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 719 ATTGTGATGGCACCGGATGGAAATTTTGGGGAGATAGCAATTTAAAAAGCAAATTTTGGG 778
Query 1577 GTCGATCAATTCAGCTTGATCCTATTGGTTTGTTGACTTTGCAATTTGATGATGGTGAAA 1636
|||||||||||||||| |||||||| |||||||||||||| |||||||||||||||||||
Sbjct 779 GTCGATCAATTCAGCTCGATCCTATCGGTTTGTTGACTTTACAATTTGATGATGGTGAAA 838
Query 1637 TTGTACAATGGAGCAAGGTGACTACATCAATATACAATCTCATACTTGGTAAATTGTATT 1696
|||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 839 TTGTGCAATGGAGTAAGGTGACTACATCAATATACAATCTCATACTTGGTAAATTGTATT 898
Query 1697 GTGATCACTATGGGACAATGCGGATTGAAGGTAACGGCGAATACTCATGTAAACTTAAAT 1756
||||||| |||||||| |||| ||||||||||||||| ||||||||||||||||||||||
Sbjct 899 GTGATCATTATGGGACTATGCTGATTGAAGGTAACGGTGAATACTCATGTAAACTTAAAT 958
Query 1757 TTAAGGAACAGTCGATGATCGATAGAAATCCTCATCAAGTTCAAGGTATAGTAGAAGACA 1816
| ||| ||||||||||||| ||||||||||| ||||||||||||||||||||||||||||
Sbjct 959 TCAAGAAACAGTCGATGATGGATAGAAATCCGCATCAAGTTCAAGGTATAGTAGAAGACA 1018
Query 1817 AAAATGGAAAAACAGTGGCTAAGTTGTTTGGAAAATGGGATGAGAGTATGCACTATGTGA 1876
| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1019 AGAATGGAAAAACAGTGGCTAAGTTGTTTGGAAAATGGGATGAGAGTATGTACTATGTGA 1078
Query 1877 TGGTCAATCAAGGAAGGGTGAATGAATCTCATCTTTTGTGGAAACGAAACAAACCTCCCG 1936
||||||||||||||| || || ||||||||||||||||||||||||||||||||||| ||
Sbjct 1079 TGGTCAATCAAGGAAAGGAGAGTGAATCTCATCTTTTGTGGAAACGAAACAAACCTCTCG 1138
Query 1937 AAAACCCGACAAAGTATAATCTAACACGGTTTGGGATCACATTAAACGAGCTAACGCCTG 1996
||||||| |||||||| ||||| ||||||||||||||||||||||||||||| |||||||
Sbjct 1139 AAAACCCTACAAAGTACAATCTTACACGGTTTGGGATCACATTAAACGAGCTCACGCCTG 1198
Query 1997 GTTTAAAGGAGAA-GTTGCCACCAACAGATTCAAGACTTAGACCAGACCAAAGGTATTTG 2055
||||||||| || |||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct 1199 ATTTAAAGGA-AATGTTGCCACCAACAGATTCCAGACTTAGACCGGACCAAAGGTATTTG 1257
Query 2056 GAGAAGGGAGAGTTTGAAATGGGAAAT-GCGGAGAAGTTGAGGTTGGAACAAAGACAAAG 2114
|| || |||||||||||||||||||| | | ||||||||||||| |||||||| |||||
Sbjct 1258 GAAAAAGGAGAGTTTGAAATGGGAAACAGAG-AGAAGTTGAGGTTAGAACAAAGGCAAAG 1316
Query 2115 ACAGGCGAGAGAGATGCAAGAGAGAGGTTGGAAACCAAAGTGGTTTAGAAAAGAGAAAGG 2174
|||||||||||||| ||||||||||| |||||||||| ||||||||| |||||||||||
Sbjct 1317 ACAGGCGAGAGAGAAACAAGAGAGAGGCTGGAAACCAACGTGGTTTAGTAAAGAGAAAGG 1376
Query 2175 AAGTGAGACTTATAGATACGTTGGAGGTTATTGGGAAGCTCGAGATTCTGGTCGTTGGGA 2234
||||||||||||||||||| |||||||||||||||| ||||||||||||||||| |||||
Sbjct 1377 AAGTGAGACTTATAGATACATTGGAGGTTATTGGGAGGCTCGAGATTCTGGTCGCTGGGA 1436
Query 2235 TGATTGTCCTGACATCTTTGGTCAAGTTCAC 2265
|||||||||||||||||||||||||||||||
Sbjct 1437 TGATTGTCCTGACATCTTTGGTCAAGTTCAC 1467
> AT4G08180.1 | Symbols: ORP1C | OSBP(oxysterol binding protein)-related
protein 1C | chr4:5169484-5173662 FORWARD LENGTH=2990
Length=2990
Score = 1107 bits (599), Expect = 0.0
Identities = 1090/1322 (82%), Gaps = 53/1322 (4%)
Strand=Plus/Plus
Query 962 TTGATACATGTGACTCTCATTCTTCAAGTTCATTCAAAAGTATTGGATCCGTTTTTCGTA 1021
|||||||| |||| | || |||||||||||| ||||| |||| ||| || | ||||||||
Sbjct 1352 TTGATACACGTGATTTTCTTTCTTCAAGTTCTTTCAAGAGTAGTGGTTCTGGTTTTCGTA 1411
Query 1022 CATCATCATTCTCTTCAGATGATGATGGGATTGCTAATGGTTTTGAGTCAGAAGATGATG 1081
|||||||| | | ||| | | ||| || | |||| |||||||| |||||||||
Sbjct 1412 CATCATCA-T-T-TTC-G-T-CCGAT--GA-AG---ATGGCTTTGAGTCTGAAGATGATA 1459
Query 1082 TTGATCCTTCTATCAAGTCTATTGGATTTAACTATCCTCATGTC-AAACGACGAAAGAAG 1140
|||||||||| |||||||||||||||| || ||||||| ||| ||| || | |||||
Sbjct 1460 TTGATCCTTCCATCAAGTCTATTGGATGCAATTATCCTCGCGTCAAAAGGA-GGAAGAAT 1518
Query 1141 TTACCTGAACCGGTTGAAAAAGAGAAAAGTGTTAGCCTTTGGTCAATGATCAAAGACAAC 1200
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1519 TTACCTGATCCGGTTGAAAAAGAGAAAAGTGTTAGCCTTTGGTCAATGATCAAAGACAAT 1578
Query 1201 ATTGGCAAGGATCTCACAAAAGTTTGTCTTCCTGTTTACTTCAATGAGCCT-TTATCTTC 1259
|| || ||||||||||||||||| |||||||||||||||||||| ||||| || |||||
Sbjct 1579 ATAGGGAAGGATCTCACAAAAGTCTGTCTTCCTGTTTACTTCAACGAGCCACTT-TCTTC 1637
Query 1260 TCTACAAAAATGCTTTGAAGATTTGGAGTATTCATATCTTCTTGATCAAGCATCTGAATG 1319
| |||| ||||| ||||| |||||||| ||||| || |||||||| | ||||| |||||
Sbjct 1638 TTTACAGAAATGTTTTGAGGATTTGGAATATTCGTACCTTCTTGACCGAGCATTTGAATA 1697
Query 1320 GGGGAAAAAGGGCAATAACCTCATGAGGATTCTGAATGTAGCTGCATTTGCTGTATCCGG 1379
|| |||| ||| |||| |||||||||||| || ||||||||||| ||||||||||| ||
Sbjct 1698 TGGCAAAAGGGGAAATAGCCTCATGAGGATACTTAATGTAGCTGCTTTTGCTGTATCTGG 1757
Query 1380 TTATGCATCAACCGAAGGAAGAATATGCAAACCTTTTAATCCAATGTTAGGTGAAACATA 1439
||||||||||| ||||||||||| |||||||||||||||||| ||||||||||||||||
Sbjct 1758 GTATGCATCAACTGAAGGAAGAATTTGCAAACCTTTTAATCCATTGTTAGGTGAAACATA 1817
Query 1440 TGAGGCTGATTATCCCGATAAAGGCCTTCGATTTTTCTCGGAAAAGGTGAGTCATCATCC 1499
||||| || ||||| || ||||||||||||||||| || |||||||| |||||||||||
Sbjct 1818 CGAGGCAGACTATCCAGACAAAGGCCTTCGATTTTTTTCAGAAAAGGTCAGTCATCATCC 1877
Query 1500 TATGATTGTGGCATGCCATTGTGATGGCACCGGATGGAAATTTTGGGGAGATAGTAAT-T 1558
|||| |||| |||||||||||||||||||||||||||||||| |||||||| || ||| |
Sbjct 1878 TATGGTTGTCGCATGCCATTGTGATGGCACCGGATGGAAATTCTGGGGAGACAGCAATCT 1937
Query 1559 TAAAAAGCAAATTTTGGGGTCGATCAATTCAGCTTGATCCTATTGGTTTGTTGACTTTGC 1618
|| | ||||||| ||||||||||| ||||||||||||||| ||||| | ||||||||||
Sbjct 1938 TAGGA-GCAAATTCTGGGGTCGATCTATTCAGCTTGATCCTGTTGGTGTATTGACTTTGC 1996
Query 1619 AATTTGATGATGGTGAAATTGTACAATGGAGCAAGGTGACTACATCAATATACAATCTCA 1678
||||||||||||| ||||| | || ||||| ||||||||||||||||||||||||||||
Sbjct 1997 AATTTGATGATGGAGAAATCCTTCAGTGGAGTAAGGTGACTACATCAATATACAATCTCA 2056
Query 1679 TACTTGGTAAATTGTATTGTGATCACTATGGGACAATGCGGATTGAAGGTAACGGC-GAA 1737
||||||||||| | || |||||||||||||| || ||||| ||||| |||| | | |||
Sbjct 2057 TACTTGGTAAACTATACTGTGATCACTATGGTACTATGCGTATTGAGGGTAGTG-CAGAA 2115
Query 1738 TACTCATGTAAACTTAAATTTAAGGAACAGTCGATGATCGATAGAAATCCTCATCAAGTT 1797
|||||||||||||||||||| ||||| ||||| || || || ||||||||||||| |||
Sbjct 2116 TACTCATGTAAACTTAAATTCAAGGAGCAGTCCATCATAGACCGAAATCCTCATCAGGTT 2175
Query 1798 CAAGGTATAGTAGAAGACAAAAATGGAAAAACAGTGGCTAAGT-TGTTTGGAAAATGGGA 1856
|| |||||||| || |||| | ||| || |||||||| || | ||||||| ||||||||
Sbjct 2176 CATGGTATAGTTCAAAACAAGAGTGGGAAGACAGTGGC-AACTATGTTTGGGAAATGGGA 2234
Query 1857 TGAGAGTATGCACTATGTGATGG-TCAAT---C---AA--GG-AAG--G-GTGAA--T-- 1899
|||||| || |||| ||||| || | | | | || || || | ||||| |
Sbjct 2235 TGAGAGCATACACTTTGTGACGGGTGATTGTTCTGGAAAAGGGAAATTGAGTGAAGATAT 2294
Query 1900 G--A--ATCTCATCTTTTGTGGAAACGAAACAAACCTCCCGAAAACCCGACAAAGTATAA 1955
| | | |||| ||| | |||||||| | ||||||||| | |||| | |||||||||||
Sbjct 2295 GTCAGGAGCTCAACTTCTCTGGAAACGGAGCAAACCTCCTGGAAACGCAACAAAGTATAA 2354
Query 1956 TCTAACACGGTTTGGGATCACATTAAACGAGCTAACGCCTGGT-TTAAAGGAGAAGTTGC 2014
||||||||| |||| |||||||| || ||||| || ||||| |||| ||||| | |||
Sbjct 2355 TCTAACACGTTTTGCAATCACATTGAATGAGCTTACACCTGGGCTTAA-GGAGAGGCTGC 2413
Query 2015 CACCAACAGATTCAAGACTTAGACCAGACCAAAGGTATTTGGAGAAGGGAGAGTTTGAAA 2074
||||||| |||||||| || |||| ||||| |||||| | ||||| |||||||||||||
Sbjct 2414 CACCAACGGATTCAAGGCTGCGACCGGACCAGAGGTATCTCGAGAACGGAGAGTTTGAAA 2473
Query 2075 TGGGAAATGCGGAGAAGTTGAGGTTGGAACAAAGACAAAGACAGGCGAGAGA-GATGCAA 2133
||| || | || |||||| || ||||||| ||||| | |||||||| || ||||||
Sbjct 2474 TGGCCAACACAGAAAAGTTGCGGCTGGAACAGCGACAACGTCAGGCGAG-GAAGATGCAG 2532
Query 2134 GAGAGAGGTTGGAAACCAAAGTGGTTTA-GAAAAGAGAAAGGAAGTGAGACTTATAGATA 2192
|||||||| ||||| || | |||||| | ||| ||||||||||| ||| |||| ||||
Sbjct 2533 GAGAGAGGATGGAAGCCGAGGTGGTTCATGAAG-GAGAAAGGAAGCGAGTCTTACCGATA 2591
Query 2193 CGTTGGAGGTTATTGGGAAGCTCGAGATTCTGG-TCGTTGGG-ATGATTGTCCTGACATC 2250
| |||||||| |||||||| ||||| ||| || | ||| | || ||||| ||||||
Sbjct 2592 CAAAGGAGGTTACTGGGAAGCCCGAGAGGATGGATCAT-GGGTA-GACTGTCCAGACATC 2649
Query 2251 TT 2252
||
Sbjct 2650 TT 2651
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 118423085655
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5