BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg482033 Length=505 Score E Sequences producing significant alignments: (Bits) Value AT2G31081.1 | Symbols: CLE4 | CLAVATA3/ESR-RELATED 4 | chr2:132... 551 2e-156 > AT2G31081.1 | Symbols: CLE4 | CLAVATA3/ESR-RELATED 4 | chr2:13238047-13238600 FORWARD LENGTH=554 Length=554 Score = 551 bits (298), Expect = 2e-156 Identities = 465/538 (86%), Gaps = 42/538 (8%) Strand=Plus/Plus Query 1 CCAAAGACTAGCTTGAAGA-GGATTAGTACAACAATATAAATAACAATTAACAGAATATG 59 ||||||||||||||||||| ||||||||| |||||| ||||||||||||| ||||||| Sbjct 1 CCAAAGACTAGCTTGAAGAGGGATTAGTA-GGCAATATTAATAACAATTAACTGAATATG 59 Query 60 GCAAGTTTCAAGTTATGGGTTTGCCTTATATTGCTTCTACTCGAGATCTCGGTGCATCAA 119 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 60 GCAAGTTTCAAGTTATGGGTTTGCCTTATATTGCTTCTACTCGAGTTCTCGGTGCATCAA 119 Query 120 TGCCGACCACTGGTCGCGGAAGAGAGCCGGTCTGATTCAGGGAACATAAGAAAGATTATG 179 |||||||||||||| ||||||||||||| || |||||||| |||||||||||||||||| Sbjct 120 TGCCGACCACTGGTTGCGGAAGAGAGCCCTTCAGATTCAGGTAACATAAGAAAGATTATG 179 Query 180 AGGGAACTTCTCAAAAGATCAGAAGAGCTGAAGGTAAGATCCAAAGGCGGCGAAACGGTT 239 ||||||||||||||||||||||||||||||||||||||||| |||| |||| |||||||| Sbjct 180 AGGGAACTTCTCAAAAGATCAGAAGAGCTGAAGGTAAGATCGAAAGACGGCCAAACGGTT 239 Query 240 CTAGGCAATACCCTTGATTCAAAGCGGCTCAGCCCTGGTGGGCCGGACCCTAGACATCAC 299 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 240 CTAGGC---ACCCTTGATTCAAAGCGGCTCAGCCCTGGTGGGCCGGACCCTAGACATCAC 296 Query 300 T-AAA-GA-GA-T-G---TGT-A--GTTT--T----TA-T--AAC--CT--T-TC-GGTG 333 | ||| || || | | | | | ||| | || | ||| | | || | || Sbjct 297 TAAAATGATGAGTAGTTTTATAACCTTTTGGTGAGGTATTCAAACTTGTAATATCAGCTG 356 Query 334 A-GGTATTG-A-AACTTGTAATTGGTGTAACTCTAAGGTTACCATCTTATCAACATTGA- 389 | || |||| | || || |||||||||||||||||| ||||||||| | |||||||| Sbjct 357 AGGGCATTGCATAA-GCGTTATTGGTGTAACTCTAAGGCTACCATCTTGTTAACATTGAG 415 Query 390 GTCAAATT-AATCTTGAAGTATGTTCATCTAAAGTGAAGCGTACTAGATAATGTGCTTGT 448 || ||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 416 GTGAAATTAAATCTTGAAGTATGTTCATCTAAGGTGAAGCGTACTAGATAATGTGCTTGT 475 Query 449 TTTTATTTAATCGGTTCTCTTTTGTGCTTCT-AAAATTATGAGAAATTGGCATTTATC 505 || |||| || | || ||||||||||||| ||||||||||| ||||| |||||||| Sbjct 476 TTGTATT-AA--GTTT-TCTTTTGTGCTTCCCAAAATTATGAGGAATTGTCATTTATC 529 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 24112390560 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5