BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg482034

Length=251
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT2G31082.1 | Symbols: CLE7 | CLAVATA3/ESR-RELATED 7 | chr2:132...   409    7e-114


> AT2G31082.1 | Symbols: CLE7 | CLAVATA3/ESR-RELATED 7 | chr2:13241440-13241700 
FORWARD LENGTH=261
Length=261

 Score =  409 bits (221),  Expect = 7e-114
 Identities = 241/251 (96%), Gaps = 0/251 (0%)
 Strand=Plus/Plus

Query  1    ATGGCTTCTAAAGCGTTATTGTTATTTGTTATGCTCACATTTCTATTGGTAATTGCAATG  60
            |||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||
Sbjct  1    ATGGCTTCTAAAGCGTTATTGTTATTTGTTATGCTCACCTTTCTATTGGTAATTGAAATG  60

Query  61   GAAGGAAGGATACTTGGGGTTAATTCAAAGAGTGAAGATGGTGAGAGCAACGATCTTTTG  120
            ||||| ||||||||| |||| |||||||||| | ||||||||||||||||||||||||||
Sbjct  61   GAAGGGAGGATACTTCGGGTGAATTCAAAGACTAAAGATGGTGAGAGCAACGATCTTTTG  120

Query  121  CAACGGTTAGGTTACAATGTTTCTGAACTAAAGCGTATTGGCCGAGAGCTTTCCGTCCAA  180
             |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  121  AAACGGTTAGGTTACAATGTTTCTGAACTAAAGCGTATTGGCCGAGAGCTTTCCGTCCAA  180

Query  181  AACGAAGTAGATAGGTTTTCACCAGGAGGGCCTGACCCTCAACATCACTCTTATCCTTTG  240
            |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||
Sbjct  181  AACGAAGTAGATAGGTTTTCTCCAGGAGGGCCTGACCCTCAACATCACTCTTATCCTCTG  240

Query  241  TCTTCAAAACC  251
            |||||||||||
Sbjct  241  TCTTCAAAACC  251



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 11410779023


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5