BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg482036 Length=409 Score E Sequences producing significant alignments: (Bits) Value AT2G31085.1 | Symbols: CLE6 | CLAVATA3/ESR-RELATED 6 | chr2:132... 514 3e-145 AT2G31083.1 | Symbols: CLE5 | CLAVATA3/ESR-RELATED 5 | chr2:132... 342 1e-93 > AT2G31085.1 | Symbols: CLE6 | CLAVATA3/ESR-RELATED 6 | chr2:13254178-13254706 FORWARD LENGTH=529 Length=529 Score = 514 bits (278), Expect = 3e-145 Identities = 371/414 (90%), Gaps = 13/414 (3%) Strand=Plus/Plus Query 1 ATCATActctctcagcttcatctctttctctctctctctcaatctctGCAA-ATCCCACA 59 |||||||||||||| ||||| || ||||||||||||||||||||| || |||||||| Sbjct 1 ATCATACTCTCTCAACTTCA--TC--TCTCTCTCTCTCTCAATCTCT-TAAGATCCCACA 55 Query 60 AATCACTTTTCTTCTTCTTATTCACCTTTTATGGCGAATTCGATCCTTAAGCAATCTCTA 119 | |||||||||||||||||| |||||||| |||||||||| ||||||||||||||||||| Sbjct 56 AGTCACTTTTCTTCTTCTTAATCACCTTTAATGGCGAATTTGATCCTTAAGCAATCTCTA 115 Query 120 ATCATACTCCTAATCATATTTTCATCACCAATCTTTAGTTCTCAAGCTCGAATCCTCCGT 179 ||||||||||||||||||| |||| |||||||||| |||||||||||||||||||||||| Sbjct 116 ATCATACTCCTAATCATATATTCAACACCAATCTTGAGTTCTCAAGCTCGAATCCTCCGT 175 Query 180 ACATATCACCCCACGGCCGTGGGCAATATGGATAGTCAGGTTCTTTTACGTGAACTCGGG 239 ||||||| |||||| || ||||| ||||||||||||||||||| |||||||||||||| Sbjct 176 ACATATCGCCCCACAACCATGGGCGATATGGATAGTCAGGTTCTCCTACGTGAACTCGGG 235 Query 240 ATTGATCTCTCTAAGTTCAAAGGT-AATAGCGAAAGGCGGTTTTTAGTGGATTCCGAAAG 298 |||||||||||||||||||||||| || | ||| || ||||||||||||||||||||||| Sbjct 236 ATTGATCTCTCTAAGTTCAAAGGTCAAGA-CGAGAGACGGTTTTTAGTGGATTCCGAAAG 294 Query 299 GGTTTCACCAGGAGGCCCTGACCCACAACACCATT-ACTGATCTTTACAGATATATATA- 356 |||||| || || || ||||| ||||||||||||| |||||||||||| |||||||||| Sbjct 295 GGTTTCTCCGGGGGGTCCTGATCCACAACACCATTGACTGATCTTTACCGATATATATAT 354 Query 357 -CTTTACCGGAGATCGATCCAAGCACAAATAATTGTGACTGATCCATGCAAGTC 409 |||||||| ||||||| || |||| |||| ||||||||||||||||||||| Sbjct 355 ACTTTACCGAAGATCGAAGCA--CACATATAACTGTGACTGATCCATGCAAGTC 406 > AT2G31083.1 | Symbols: CLE5 | CLAVATA3/ESR-RELATED 5 | chr2:13252219-13252765 FORWARD LENGTH=547 Length=547 Score = 342 bits (185), Expect = 1e-93 Identities = 341/412 (83%), Gaps = 28/412 (7%) Strand=Plus/Plus Query 1 ATCATActctctcagct-tcatctc-tttct-c-tctctctctcaatctctGCAAATCCC 56 |||||||||||||| | ||||||| ||| | | |||||||||||| ||| | | ||| Sbjct 1 ATCATACTCTCTCA-ATATCATCTCATTT-TGCATCTCTCTCTCAA-CTC--C-CACCCC 54 Query 57 -ACAAA-TCACTTTTCTTCTTCTTATTCAC-CTTTTATGGCGAATTCGATCCTTAAGCAA 113 |||| |||| ||| | ||| ||| | || ||||||||| || |||||| |||||| Sbjct 55 TCCAAATTCACCTTTAAT-TTC---TTC-CTCTATTATGGCGACTTTGATCCTCAAGCAA 109 Query 114 TCTCTAATCATACTCCTAATCATATTTTCATCACCAATCTTTAGTTCTCAAGCTCGAATC 173 |||||||||||||||||||||||||||||| || || ||| |||||||||||||||||| Sbjct 110 ACTCTAATCATACTCCTAATCATATTTTCATTACAAACCTTAAGTTCTCAAGCTCGAATC 169 Query 174 CTCCGTACATATCACCCCACGGCCGTGGGCAATATGGATAGTCAGGTTCTTTTACGTGAA 233 |||||| |||||| || | || ||||||||||||||||||||||||| ||| |||| Sbjct 170 CTCCGTTCATATCGTGCCGTGTCCATGGGCAATATGGATAGTCAGGTTCTCCTACATGAA 229 Query 234 CTCGGGATTGATCTCTCTAAGTTCAAAGGTAATAGCGAAAGGCGGTTTTTAGTG-GATTC 292 |||||| ||||||||||||||||||||||| ||| ||| ||||| ||||||||| | ||| Sbjct 230 CTCGGGTTTGATCTCTCTAAGTTCAAAGGTCATAACGAGAGGCGATTTTTAGTGAG-TTC 288 Query 293 CGAAAGGGTTTCACCAGGAGG-CCCTGACCCACAACACCATT-ACTGATCTTTACAGATA 350 ||| ||||||||||| ||||| ||| || ||||||||||||| | ||||| ||| | | Sbjct 289 CGACAGGGTTTCACCCGGAGGTCCC-GATCCACAACACCATTGAATGATCGATACCTAAA 347 Query 351 TATATACTTTACCGGAGATCGATCCAAGCACAAATAATTGTGACTGATCCAT 402 || ||||||||||| | | |||||||||||||||||| ||||||||| ||| Sbjct 348 TAAATACTTTACCG-A-A--GATCCAAGCACAAATAAT-GTGACTGATTCAT 394 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 19353083365 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5