BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg482094
Length=1452
Score E
Sequences producing significant alignments: (Bits) Value
AT2G31690.1 | Symbols: | alpha/beta-Hydrolases superfamily pro... 2036 0.0
> AT2G31690.1 | Symbols: | alpha/beta-Hydrolases superfamily protein
| chr2:13476093-13477547 REVERSE LENGTH=1455
Length=1455
Score = 2036 bits (1102), Expect = 0.0
Identities = 1352/1469 (92%), Gaps = 31/1469 (2%)
Strand=Plus/Plus
Query 1 ATGGCAC-TGATCCAAAACCCTAATATAAAACATGTTCCATTTCTAAGAAACAGAACTCC 59
||||| | ||||||||||||||||||| ||||||| ||||||||||||||||||| ||||
Sbjct 1 ATGGC-CTTGATCCAAAACCCTAATATGAAACATGCTCCATTTCTAAGAAACAGATCTCC 59
Query 60 AGAACAAACACTCTTTCTTCC-TCATACTCTTTCTCTCCCTACTTGTAACCAAAACTCCA 118
| |||||||||||||| |||| | |||||||||||||||||| || | |||||||| |||
Sbjct 60 ACAACAAACACTCTTTATTCCGT-ATACTCTTTCTCTCCCTATTTCTTACCAAAACCCCA 118
Query 119 AAAGACTTGTGATTACTAATTCTTCTTCTTCTAATTCTTCTCTATTATCACCAGTGATTC 178
|||||||| | | |||||||||||||||| ||||||||||||| ||||||||||||
Sbjct 119 AAAGACTTAAAACTGCTAATTCTTCTTCTTC---TTCTTCTCTATTAGCACCAGTGATTC 175
Query 179 TAACTGCTCCGGTTGCTTCTTCTCCTCCTCCGCCGGTTTATCGTGCACCGAAGTCCCCTT 238
||| | ||||||||||||||||| ||||||| ||| | ||| ||||||| |||| ||||
Sbjct 176 TAAATTCTCCGGTTGCTTCTTCTTCTCCTCCTCCGATATATTGTGCACCAAAGTTTCCTT 235
Query 239 GCTCCTGTGGGGCAGTGACTGTACCCTTATCTCGGGTATGGAGAGAGATACAAGGATGTA 298
||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 236 GCTCCAGTGGGGCAGCGACTGTACCCTTATCTCGGGTATGGAGAGAGATACAAGGATGTA 295
Query 299 ACAACTGGAAAGATCTCATCGAACCTTTAAACCCTCTTCTCCAACAAGAGATCACTCGCT 358
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 296 ACAACTGGAAAGATCTCATCGAACCTTTGAACCCTCTTCTCCAACAAGAGATCACTCGCT 355
Query 359 ATGGCAACTTTGTTTCCACTTGTTACAAAGCCTTCGATCTAAACCCTAATTCAAAACGTT 418
| |||||||| |||||||||||||||||||||||||||||| |||||||||| |||||||
Sbjct 356 ACGGCAACTTAGTTTCCACTTGTTACAAAGCCTTCGATCTAGACCCTAATTCCAAACGTT 415
Query 419 ACTTGAACTGCAAGTATGGCAAACAAACCCTACTTAAAGAAACCGAAATCGACCAACCTG 478
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 416 ACTTGAACTGCAAGTACGGCAAACAAACCCTACTTAAAGAAACCGAAATCGACCAACCTG 475
Query 479 AGGACTACCAAGTCACCAAATACATCTACGCCACACCGG------ACATCAACATCAGTC 532
|||||||||||||||| ||||| |||||||||||||||| |||||||||||||||
Sbjct 476 AGGACTACCAAGTCACAAAATATATCTACGCCACACCGGATATTAACATCAACATCAGTC 535
Query 533 CGATCCAGAACGAGACT-AATCGACGAGCTCGTTGGGTAGGTTACGTTGCAGTTTCATCC 591
| ||||||||||||| | ||||||||||| |||||||||||||||||||||| |||||||
Sbjct 536 CTATCCAGAACGAGA-TGAATCGACGAGCGCGTTGGGTAGGTTACGTTGCAGCTTCATCC 594
Query 592 GATGACTCGGTGAAACGTATAGGGAGGAGAGACATTGTGGTGACTTTTCGTGGAACGGTA 651
|||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||
Sbjct 595 GATGACTCGGTGAAACGTTTAGGGAGGAGAGACATTGTGGTGACGTTTCGTGGAACGGTA 654
Query 652 ACTAACCCTGAATGGTTGGCAAATTTCATGAGCTCTTTAACTCCGGCTAGGTTCCATCCT 711
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 655 ACTAACCCTGAATGGTTGGCAAATTTCATGAGCTCTTTAACTCCTGCTAGGTTCCATCCT 714
Query 712 CATAACCCTCGTCTCGACGTGAAGGTCGAATCCGGGTTCTTGAGTTTATATACATCCGAT 771
|||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||| |||
Sbjct 715 CATAACCCGCGTCTCGACGTGAAGGTTGAATCCGGGTTCTTGAGTTTATACACATCAGAT 774
Query 772 GAGAGTGAGAGCAAATTCGGGCTAGAGAGCTGCAGAGAACAGCTTCTGTCCGAAATCTCG 831
|||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||
Sbjct 775 GAGAGTGAGAGCAAATTCGGACTAGAGAGCTGCAGACAACAGCTTCTGTCCGAAATCTCG 834
Query 832 AGATTGGTGAATAAGTACAAAGGAGAAGAGATGAGTATCACACTCGCTGGACATAGCATG 891
|||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 835 AGATTGATGAATAAGTATAAAGGAGAAGAGATGAGTATCACACTCGCTGGACATAGCATG 894
Query 892 GGAAGCTCATTGGCTCAACTTCTTGCTTATGACATTTCGGAACTAGGTTTAAACCAGAGA 951
|||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||
Sbjct 895 GGAAGCTCATTGGCTCAACTTCTTGCTTATGACATTGCGGAACTAGGTTTAAACCGGAGG 954
Query 952 ATTGGTGAGAGAGATATTCCGGTGACCGTGTTCTCATTCGCAGGTCCTAGGGTTGGTAAC 1011
||||| || ||||||||||||||||||||||||| |||||||| |||||||||||||||
Sbjct 955 ATTGGCAAGGGAGATATTCCGGTGACCGTGTTCTCTTTCGCAGGACCTAGGGTTGGTAAC 1014
Query 1012 TTGGAGTTCAAAAAACGTTGCGAGGAGCTAGGTGTTAAGGTTTTGAGGATCACTAACGTC 1071
|||||||| |||||||||||||| ||||||||||||||||| ||||||||||||||||||
Sbjct 1015 TTGGAGTTTAAAAAACGTTGCGAAGAGCTAGGTGTTAAGGTCTTGAGGATCACTAACGTC 1074
Query 1072 AATGATCCGGTCACTAAACTTCCTGGTGTTTTATTCAATGAGAATTTTAGGGTTCTAC-T 1130
|||||||||||||| |||||||| |||||||||||||||||||||||||||||| || |
Sbjct 1075 AATGATCCGGTCACAAAACTTCCAGGTGTTTTATTCAATGAGAATTTTAGGGTTTTAGGT 1134
Query 1131 G-T----ATGAGCTTCCATGGAGCTGTTCATGTTATGCTCATGTTGGAGTGGAACTCACG 1185
| | |||||||||||||||||||||||||||||| ||||||||| ||||||||||||
Sbjct 1135 GGTTTTTATGAGCTTCCATGGAGCTGTTCATGTTATGTTCATGTTGGGGTGGAACTCACG 1194
Query 1186 CTAGATTTTTTCGATGTTCAAAACATTTCTTGCGTTCACGATCTCCAAACCTATATCGAT 1245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1195 CTAGATTTTTTCGATGTTCAAAACATTTCTTGCGTTCACGATCTCCAAACCTATATCGAT 1254
Query 1246 CTTCTAAACCAACGCAGAA-TGAACTCAAGATCAGCCGATTCCGATTCCGATGAGGATGA 1304
|||||||||||||| |||| | ||||| ||||||| |||||||||| || || ||||
Sbjct 1255 CTTCTAAACCAACGGAGAACT-AACTCGAGATCAGTCGATTCCGAT---GA--AG-ATGA 1307
Query 1305 GGAGAGTGACAATTTTGCCTTAGAGTTTTTGAAGAGAAATGGTGAGAAGGTTATGTTCTT 1364
||| ||||||||| |||| ||||||||||| |||| |||||| |||||| | ||||||||
Sbjct 1308 GGACAGTGACAATGTTGCATTAGAGTTTTTAAAGACAAATGGCGAGAAGATGATGTTCTT 1367
Query 1365 GAAGGGACAACGAATGATGCATTGGATA-AATGTCGTGGATCTACTTTTTTCTGTATCTA 1423
|||| |||||||||||||| ||||| | |||| ||||||||||||||||||| | ||||
Sbjct 1368 GAAGAGACAACGAATGATGTATTGG-TCCAATGCCGTGGATCTACTTTTTTCTTTTTCTA 1426
Query 1424 ACCATGTGTCCTATTGTAATATTTTTTAG 1452
||||| |||| ||||||||||| ||||||
Sbjct 1427 ACCATATGTCGTATTGTAATATATTTTAG 1455
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 71585977170
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5