BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg482106
Length=3636
Score E
Sequences producing significant alignments: (Bits) Value
AT2G31830.2 | Symbols: | endonuclease/exonuclease/phosphatase ... 5657 0.0
AT1G05630.1 | Symbols: AT5PTASE13, 5PTASE13 | Endonuclease/exon... 1857 0.0
> AT2G31830.2 | Symbols: | endonuclease/exonuclease/phosphatase
family protein | chr2:13532680-13537741 REVERSE LENGTH=3655
Length=3655
Score = 5657 bits (3063), Expect = 0.0
Identities = 3331/3464 (96%), Gaps = 4/3464 (0%)
Strand=Plus/Plus
Query 1 CTCATTTCCTCTTCATGGTTGGTTTCGTTCCGATTTCCAAATTTCTTCATTTGGCAAATA 60
||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1 CTCATTTCCCCTTCATGGTTGGTTTTGTTCCGATTTCCAAATTTCTTCATTTGGCAAATT 60
Query 61 CTTTTGATCTTCTTCCATGGATTCGGTAATTATTGAAGCAGATGAGCGGGAGGCGTTGGC 120
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 61 CTTTTGATCTTCTTCCATGGATTCGGTAATTATTGAACCAGATGAGCGGGAGGCGTTGGC 120
Query 121 ATCGCTCGCCCCTGCTCATCCTCTGCCGCCCCGTAAGACGCATTCCTATGTCGAGCAATA 180
|||||| | ||||||||||||||| || ||||||||||| |||||||||||||||||||
Sbjct 121 ATCGCTTGTCCCTGCTCATCCTCTTCCTCCCCGTAAGACACATTCCTATGTCGAGCAATG 180
Query 181 CGAACAGAAGCCTCACCATCCAATCCGCAAATATAGCCTTGATGAGGGATCTAGATCCGT 240
|||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 181 CGAACAGAAGCCGCACCATCCAATCCGCAAATATAGCCTTGATGAGGGCTCTAGATCCGT 240
Query 241 GACATCGGATTCCGAAGCTGTTTATTTTGATTCCTCTGATGGTGAGTTCTCTACCGAAGG 300
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 241 GACATCGGATTCTGAAGCTGTTTATTTTGATTCCTCTGATGGTGAGTTCTCTACCGAAGG 300
Query 301 AGTAGTCATCATCAATGGAAGAACCAGTGGTGAAAGAGGCAACGGGGAGGATTACGGTTT 360
||||| |||| || ||||||||||||||||||||||||||||||||||||| | |||||
Sbjct 301 AGTAGCCATCGTCGATGGAAGAACCAGTGGTGAAAGAGGCAACGGGGAGGAATGTGGTTT 360
Query 361 TGTCACGCCTCCATCGAAACCAGCATCACAGCACGGTGAAAATGACGGCGGCGGGGAGGA 420
||||||||||||||||||||||||||||||| ||||| ||||||||||||| |||||||
Sbjct 361 TGTCACGCCTCCATCGAAACCAGCATCACAGGGCGGTGGAAATGACGGCGGCAGGGAGGA 420
Query 421 TGATATCGAGTCCCTTCCAGAATTCATCGGTGCAGGAGGTGGCGTTGACGTATTTAAGGT 480
||||||||||||||||||||||||||| || |||||||||||| |||||||||| |||||
Sbjct 421 TGATATCGAGTCCCTTCCAGAATTCATTGGCGCAGGAGGTGGCCTTGACGTATTCAAGGT 480
Query 481 GCCGGTGCGTGCCGCCGTGAATCCCGGACGGCCGCCATGTCTCGAGCTCCGACCGCATCC 540
||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 481 GCCGGTGCGTGCCGCGGTGAATCCCGGACGGCCTCCATGTCTCGAGCTCCGACCGCATCC 540
Query 541 GTTAAGAGAGACACAGACGGGAAAGTTTCTGAGAAACATTG-TGTGCACAGAAAGTCAGC 599
|||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||
Sbjct 541 ATTAAGAGAGACACAGACGGGAAAGTTTCTGAGAAACATTGCT-TGCACAGAAAGTCAGC 599
Query 600 TATGGGCGGGACAAGAGAATGGCGTGAGGTTCTGGAACTTGGAGGAAGCATACGAGGTTG 659
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
Sbjct 600 TATGGGCGGGACAAGAGAACGGCGTGAGGTTCTGGAACTTGGAGGAAGCATACGAGGTCG 659
Query 660 GTTGTGGCCTTGGCGGGCAGGTACGGCGAGGAGATGAGGATACAGCGCCGTTTCATGAAT 719
||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||
Sbjct 660 GTTGTGGCCTTGGCGGGCAGGTACGGCGAGGGGATGAGGATACAGCCCCGTTTCATGAAT 719
Query 720 CTGTTCCGACCTCGCCTGCCTTGTGTTTGA-TGATTGACCACGGCAATAGGCTTGTGTGG 778
|||||||||||||||||||||| ||||| | || ||||||||||||||||||||||||||
Sbjct 720 CTGTTCCGACCTCGCCTGCCTTATGTTT-ATTGGTTGACCACGGCAATAGGCTTGTGTGG 778
Query 779 ACTGGCCACAAGGATGGCAAAATCAGGGCCTGGAAAATGAATCAGCCGATTACGACTACT 838
|| |||||||||||||||||||| ||||||||||||||||||||||| | ||||||||||
Sbjct 779 ACCGGCCACAAGGATGGCAAAATTAGGGCCTGGAAAATGAATCAGCCCAATACGACTACT 838
Query 839 GCGGATGATTCAAAGCCTTTCAAGGAACGACTCTCGTGGCAAGCTCATCGTGGTCCTGTG 898
|| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 839 GCAGATGATTCAAAGCCTTTCAAGGAACGACTCTCATGGCAAGCTCATCGTGGTCCTGTG 898
Query 899 AATTATATCGTCATAAGCTCATATGGTGATATGTGGTCATGTTCTGATGGCGGTGTGATA 958
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 899 AATTATATTGTCATAAGCTCATATGGTGATATGTGGTCATGTTCTGATGGCGGTGTGATA 958
Query 959 AAAATATGGACTTTGGATTCTTTAGAGAAGTCTCTTGTGCTTAAACCGGAGGAGAAACAT 1018
|| |||||||||||||||||||||||||||||||||||||| |||| ||||||||| |||
Sbjct 959 AAGATATGGACTTTGGATTCTTTAGAGAAGTCTCTTGTGCTAAAACTGGAGGAGAAGCAT 1018
Query 1019 ATGGCCGCATTGTTAGTTGAGAGGTCTGGCATTGACCTGAGGAGCCAAGTTACTGTCAAT 1078
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1019 ATGGCCGCATTGTTAGTTGAGAGGTCTGGCATTGACCTGAGGAGCCAAGTTACTGTCAAT 1078
Query 1079 GGTACATGCAGCATATCTTCGTCAGATGTCAAGTTTTTGTTAGTTGATACAGTAAGAGCA 1138
|||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1079 GGTACATGCAGCATTTCTTCGTCAGATGTCAAGTTTTTGTTAGTTGATACAGTAAAAGCT 1138
Query 1139 AAAGTGTGGGCTGTGCAGCACCTCTCATTCTCACTATGGGATGCTCAGAATAAAGAGCTT 1198
||||| ||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||
Sbjct 1139 AAAGTTTGGGCTGTGCAACACCTCTCATTCTCACTTTGGGATGCTCAAAATAAAGAGCTT 1198
Query 1199 CTGAAAGTTTTTAATATTGATGGGCAAGTTGAAAATCGTGTGGACATGCCACCAACGCAA 1258
||||||||||||||||||||||| ||||| |||||||| ||||||||||||||||| |||
Sbjct 1199 CTGAAAGTTTTTAATATTGATGGCCAAGTCGAAAATCGAGTGGACATGCCACCAACACAA 1258
Query 1259 GGTCAACAAGTTGAAGACACGAAAGCGAAGTTCTTCTCCGCACCAAAAAAGGAGAAATCA 1318
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1259 GGTCAACAAGTTGAAGACACGAAAGCGAAGTTCTTCTCCGCACCAAAAAAGGAAAAATCA 1318
Query 1319 CAGGGCTTTTTGCAAAGATCGCGCCATGCCATAATGGGAGCTGCAGGAGCTGTTCGTCGA 1378
||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1319 CAGGGCTTTCTGCAAAGATCGCGCCATGCCATTATGGGAGCTGCAGGAGCTGTTCGTCGA 1378
Query 1379 GCTGCCACTAGAAGTACAGGAGCTTTTGCAGAAGACACTAGGAAAGTAGAAGCTATTGCG 1438
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1379 GCTGCCACTAGAAGTGCAGGAGCTTTTGCAGAAGACACTAGGAAAGTAGAAGCTATTGCG 1438
Query 1439 ATAGCGGCAGATGGATCAATTTGGACTGGAAGCATGAATGGCGTAATTGCTCAGTGGGAC 1498
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1439 ATAGCGGCAGATGGATCAATTTGGACTGGAAGCATGAATGGTGTAATTGCTCAGTGGGAC 1498
Query 1499 GGAAATGGAAGCCGCTTGCGGGAGGTGAATCATCATCAGCAGGCTGTTCTGTGCTTTTGC 1558
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1499 GGAAATGGAAGCCGCTTGCGGGAGGTGAATCATCATCAGCAGGCTGTTCTGTGCTTTTGC 1558
Query 1559 ACCTTTGGTGATCGAATATATGTGGGTTATGCAAGTGGTTACATCCAGGTCTTGGATCTT 1618
|| ||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct 1559 ACTTTTGGTGATCGAATATATGTGGGTTATTCAAGTGGTTACATTCAGGTCTTGGATCTT 1618
Query 1619 GGTGGAAAGCTAATTGCAAGCTGGGTTTCACACAATGAACCTGTGATAAAGCTAGCAGCA 1678
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1619 GGTGGAAAGCTAATTGCAAGCTGGGTTTCACACAATGAACCTGTGATAAAGCTAGCAGCA 1678
Query 1679 GGTGGTGGTTTCATTTTTAGTTTAGCCACTCATGGTGGTGTAAGAGGATGGTATGTGACA 1738
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1679 GGTGGTGGTTTCATTTTTAGCTTAGCCACTCATGGTGGTGTAAGAGGATGGTATGTGACA 1738
Query 1739 TCTCCAGGACCTCTAGACAGCGTAATCCGAACAGAATTGTCTCAAAAGGAAATGACATAT 1798
|| ||||||||||| |||||| |||||||||||||||||||||||||||||||| |||||
Sbjct 1739 TCCCCAGGACCTCTTGACAGCTTAATCCGAACAGAATTGTCTCAAAAGGAAATGGCATAT 1798
Query 1799 GCCCGACAAGACAGTGTTAAAATCTTGATTGGTACCTGGAATGTTGGTGAAGGACGGGCT 1858
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1799 GCCCGACAAGACAGTGTTAAAATCTTGATTGGTACCTGGAATGTTGGTGAAGGACGGGCT 1858
Query 1859 TCACGCGGAGCGCTTGTGTCTTGGCTGGGTTCTGCTGTTTCAGATGTTGGCATTGTCGCT 1918
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1859 TCACGCGGAGCGCTTGTGTCTTGGCTGGGTTCTGCTGTTTCAGATGTTGGCATTGTCGCT 1918
Query 1919 GTTGGCTTGCAAGAGGTGGATATGGGGGCTGGTTTCCTAGCCATGTCCACTGCTAAGGAA 1978
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1919 ATTGGCTTGCAAGAGGTGGATATGGGGGCTGGTTTCCTAGCCATGTCCACTGCTAAGGAA 1978
Query 1979 ACGGTAGGGGTTGAAGGAAGTGCCGTGGGCCAGTGGTGGCTTGATGCAATTGGAAATGCA 2038
||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||
Sbjct 1979 ACGGTAGGGGTTGAAGGAAGTGCCGTGGGGCAATGGTGGCTTGATGCAATTGGAAATGCA 2038
Query 2039 CTGGATGAGAGAAATACTTTCGAACGTATGGGTTCAAGGCAATTGGCAGGACTGCTAATA 2098
||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||
Sbjct 2039 CTGGATGAGAGAAATACTTTCGAACGTATGGGTTCAAGGCAGTTGGCTGGACTGCTAATA 2098
Query 2099 TCTCTTTGGGTGAGGAAGAGTATTAGAACACATGTCGGGGATCTTGATGTCGCAGCAGTT 2158
|||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||
Sbjct 2099 TCTCTTTGGGTGAGGAAGAGTATTAGGACACATGTCGGAGATCTTGATGTCGCAGCAGTT 2158
Query 2159 CCTTGTGGATTTGGCCGCGCCATTGGGAACAAGGGAGGTGTGGGTTTGAGAATCAGAGTT 2218
|| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 2159 CCATGTGGATTTGGCCGCGCCATAGGGAACAAGGGAGGTGTGGGTTTGAGAATCAGAGTT 2218
Query 2219 TATGACCGGATTATGTGCTTTGTGAACTGTCACTTGGCTGCTCACTTGGAGGCAGTTACT 2278
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2219 TATGACCGGATTATGTGCTTTGTGAACTGTCACTTGGCTGCTCACTTGGAGGCAGTTACT 2278
Query 2279 CGGAGAAACGCGGATTTCAATCACATATATCGGTCAATGGTCTTTTCCAAAGGACAAAGT 2338
||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||
Sbjct 2279 CGGAGAAACGCGGATTTTAATCACATATATCGGTCAATGGTCTTCTCCAAAGGACAAAGT 2338
Query 2339 GTATATACTGCTGCAGCTGCTGGTGCTTCAACATCAGCTCAAGCGCTAAAAAATAACCCT 2398
||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||
Sbjct 2339 GTATATACTGCTGCAGCTGCTGGTGCTTCAACATCTGCTCAAGCGCTAAAGAATAACCCT 2398
Query 2399 AATACAAACATCAGCACTGAAGAGGAGAAGTCTGATTTAGCAGCAGCAGATCTGGTTGCA 2458
|||||||||| |||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct 2399 AATACAAACAACAGCACTGAAGAGGAGAAGTCTCATTTAGCATCAGCAGATCTGGTTGCA 2458
Query 2459 TTTTTCGGTGACTTCAATTACAGATTGTTTGGTATAACCTACGATGAAGCTAGGGACTTC 2518
||||||||||||||||||||||| ||||||||||| ||||| |||||||| |||||||||
Sbjct 2459 TTTTTCGGTGACTTCAATTACAGGTTGTTTGGTATTACCTATGATGAAGCGAGGGACTTC 2518
Query 2519 ATTTCGCACCGATCTTTTGATTGGCTCAGAGAGAAAGACCAACTTAGGCAAGAGATGAAT 2578
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2519 ATCTCGCACCGATCTTTTGATTGGCTCAGAGAGAAAGACCAACTTAGGCAAGAGATGAAT 2578
Query 2579 GAGGGAAAAGTGTTCCAAGGAATGCGTGAGGCGTTAATCACCTTCCCGCCAACTTACAAA 2638
|||||||||||||||||||||||||||||||| ||||||||||||||||| || ||||||
Sbjct 2579 GAGGGAAAAGTGTTCCAAGGAATGCGTGAGGCATTAATCACCTTCCCGCCGACCTACAAA 2638
Query 2639 TTTGAAAAGAATAAACCAGGTCTTGGAGGGTATGATTCAGGAGAGAAAAAGCGAATACCC 2698
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 2639 TTTGAAAAGAATAAACCAGGTCTTGGAGGGTATGATTCAGGGGAGAAAAAGCGAATACCC 2698
Query 2699 GCATGGTGTGACAGAGTTATATATAGAGACAACCAATCAATCTCATATTCAGAATGCAGT 2758
|| ||||||||||||||||||||||||||||||||||||||||||||| | || ||||||
Sbjct 2699 GCTTGGTGTGACAGAGTTATATATAGAGACAACCAATCAATCTCATATACGGAGTGCAGT 2758
Query 2759 TTGCAGTGCCCTGTAGTTTCGTCGACTGTAATGTATGAAGCTTGCATGGATGTGACTGAG 2818
|| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 2759 TTAAAGTGCCCTGTAGTTTCGTCGACTATAATGTATGAAGCTTGCATGGATGTGACTGAG 2818
Query 2819 AGTGATCACAAACCCGTGCGGTGCAAACTTCATGCTAACATAGCTCACACCGATAAATCT 2878
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2819 AGCGATCACAAACCCGTGCGGTGCAAACTTCATGCTAACATAGCTCACACCGATAAATCT 2878
Query 2879 GTGCGAAGACAGGAGCTAGGGAAAATAGTAAAGTCCAATGAGAAACTCAAATCCATGTTC 2938
||||||||||||||||||||||||||||| ||||| ||||||||||||| | ||||||||
Sbjct 2879 GTGCGAAGACAGGAGCTAGGGAAAATAGTCAAGTCGAATGAGAAACTCAGAGCCATGTTC 2938
Query 2939 GAGGAACTAAAATCGGTTCCGGAAACATCAGTGAGCACCAACAACATTCTTCTTCATAGT 2998
|||||||||||||| ||||| |||||||||||||||||||||||||||||||| ||||||
Sbjct 2939 GAGGAACTAAAATCAGTTCCAGAAACATCAGTGAGCACCAACAACATTCTTCTCCATAGT 2998
Query 2999 CAGGACACTTTCATCTTTACTATCAGAAACACTTCAAACTCGAGTAGAGCCATCTTCAAC 3058
|||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 2999 CAGGACACGTTCATCTTTACAATCAGAAACACTTCAAACTCGAGTAGAGCCATCTTCAAC 3058
Query 3059 ATCGTCTGCAAGGGTCAAACTCTCGTTAGAGAGGATGGAGAGGAACCTGATAATCATTCA 3118
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3059 ATCGTCTGTAAGGGTCAAACTCTCGTTAGAGAGGATGGAGAGGAACCTGATAATCATTCA 3118
Query 3119 AGAGGCACCTTTGGTCTCCCTCGCTGGCTTGAGGTTTCTCCAGGAGCTGGGATTATAAAA 3178
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3119 AGAGGCACATTTGGTCTCCCTCGCTGGCTTGAGGTTTCTCCAGGAGCTGGGATTATAAAA 3178
Query 3179 CCAGATGCTTCACTGCAGGTGAAGGTTCATCATGAAGACTTTCACACCTCAGAGGAGTCC 3238
|||||||||||||||||||||||||||||||||||||||| |||| ||| ||||||| |
Sbjct 3179 CCAGATGCTTCACTGCAGGTGAAGGTTCATCATGAAGACTCCCACAACTCGGAGGAGTTC 3238
Query 3239 GTTGATGGCATCCAACAAAACTCATTGTCTGAAGAAAGTTCTGACAAAGAAGTGACCCTG 3298
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3239 ATTGATGGCATCCAACAAAACTCATTGTCTGAAGAAAGTTCTGACAAAGAAGTGACCCTG 3298
Query 3299 ATCATAATCATTCAGGGAAGCTGCTCGACCAGAACAACAAGCCACTCTATCAAAGTCCGC 3358
||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 3299 ATCATAATCGTTCAGGGAAGCTGCTCGACCAGAACAATAAGCCACTCTATCAAAGTCCGG 3358
Query 3359 CACTGCTCCTCAGCAGTCAAATCCCTTAGTCTCGTTCATTCTAAAACAACCAGCATGACA 3418
||||||||||| |||| ||||||||||||||| ||||||||||||||||||| ||||||
Sbjct 3359 CACTGCTCCTCCGCAGCCAAATCCCTTAGTCTTGTTCATTCTAAAACAACCACCATGACT 3418
Query 3419 AAGAATCTAGAGGGTTCCACTCGTTACCAGACAGATGCTAACCG 3462
||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3419 AAGAATCTAGAGGGTTCCACTCGTTACCAGACAGATGCTAACCG 3462
Score = 143 bits (77), Expect = 1e-32
Identities = 87/92 (95%), Gaps = 0/92 (0%)
Strand=Plus/Plus
Query 3545 GATCTTAGGAGCAGAAGAACTGTGAAGCCATCAAAAGAAATGCATCCAGTTATAGTTTCT 3604
|||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3464 GATCGTAGGAGCAGCAGAACTGTGAAGCCATCAAAAGAAATGCATCCAGTTATAGTTTCT 3523
Query 3605 TCATTTTCATTCTTTGATTCATTGGATATTAG 3636
|||||||||||| || |||||| |||||||||
Sbjct 3524 TCATTTTCATTCCTTAATTCATCGGATATTAG 3555
> AT1G05630.1 | Symbols: AT5PTASE13, 5PTASE13 | Endonuclease/exonuclease/phosphatase
family protein | chr1:1682318-1687363
FORWARD LENGTH=3888
Length=3888
Score = 1857 bits (1005), Expect = 0.0
Identities = 1622/1917 (85%), Gaps = 54/1917 (3%)
Strand=Plus/Plus
Query 471 TATTTAAGGTGCCGGTGCGTGCCGCCGTGAATCCCGGACGGCCGCCATGTCTCGAGCTCC 530
|||||||||| |||||||| || || ||| |||||||||| ||||| ||||| |||||
Sbjct 527 TATTTAAGGTCCCGGTGCGCGCGGCGGTGCATCCCGGACGTCCGCCGTGTCTTGAGCTGA 586
Query 531 GACCGCATCCGTTAAGAGAGACACAGAC-GGGAAAGTTTC-TGAGAAACATTG-TGTGCA 587
| ||||||||||| || ||||| ||||| ||| || ||| |||| ||||||| | || |
Sbjct 587 GGCCGCATCCGTTGAGGGAGACGCAGACTGGG--AGATTCTTGAGGAACATTGCT-TGTA 643
Query 588 CAGA-AAGTCAGCTATGGGCGGGACAAGAGAATGGCGTGAGGTTCTGGAACTTGGAGGAA 646
| || | | ||||| ||||| || ||||||||||| | ||||| ||||| ||||| ||
Sbjct 644 CGGAGACG-CAGCTTTGGGCTGGTCAAGAGAATGGTATCAGGTTTTGGAATTTGGAAGAT 702
Query 647 GCATACGAGGTTGGTTGTGGCCTTGGCGGGCAGGTACGGCGAGGAGATGAGGATACAGCG 706
|| || |||| ||| ||||| |||| || ||||| | |||||| ||||||||||| |||
Sbjct 703 GCGTATGAGGCTGGGTGTGGGATTGGTGGCCAGGTCCCGCGAGGGGATGAGGATACGGCG 762
Query 707 CCGTTTCATGAATCTGTTCCGACCTCGCCTGCCTTGTGTTTGATGATTGACCACGGCAAT 766
||||||||||| |||||| | || || || | |||||||| || |||||| ||||
Sbjct 763 CCGTTTCATGAGTCTGTTACTACTTCTCCAACAATGTGTTTGGTGGCTGACCAAAGCAAC 822
Query 767 AGGCTTGTGTGGACTGGCCACAAGGATGGCAAAATCAGGGCCTGGAAAATGAATC--AGC 824
| |||| |||||| ||| |||||||||||||||||| |||| ||||| ||| ||| |||
Sbjct 823 AAGCTTTTGTGGAGTGGTCACAAGGATGGCAAAATCCGGGCTTGGAAGATGGATCAGAGC 882
Query 825 -C-GATTACGAC-T-ACTGCGGATGATTCAAAGCCTTTCAAGGAACGACTCTCGTGGCAA 880
| | || | | | | || |||||||| | ||||||||||| || |||| |||| |
Sbjct 883 TCTG-TTTC-TCATGA-TGATGATGATTCTGATCCTTTCAAGGAGCGTGTCTCCTGGCTA 939
Query 881 GCTCATCGTGGTCCTGTGAATTATATCGTCATAAGCTCATATGGTGATATGTGGTCATGT 940
||||||||||||||||| |||| || ||||| ||||| |||||||||||||||||||||
Sbjct 940 GCTCATCGTGGTCCTGTCAATTCCATTGTCATTAGCTCTTATGGTGATATGTGGTCATGT 999
Query 941 TCTGATGGCGGTGTGATAAAAATATGGACTTTGGATTCTTTAGAGAAGTCTCTTG-TGCT 999
||||| || ||||| |||||||||||| ||| |||| | |||||||| |||| || ||||
Sbjct 1000 TCTGAAGGAGGTGTTATAAAAATATGGCCTTGGGATACGTTAGAGAAATCTC-TGCTGCT 1058
Query 1000 TAAACCGGAGGAGAAACATATGGCCGCAT-TGTTAGTTGAGAGGTCTGGCATTGACCTGA 1058
|||||||||||||||||| ||||| || | | ||||| ||||| |||| ||||||||| |
Sbjct 1059 TAAACCGGAGGAGAAACACATGGCTGC-TCTATTAGTGGAGAGATCTGCCATTGACCTAA 1117
Query 1059 GGAGCCAAGTTACTGTCAATGGTACATGCAGCATATCTTCGTCAGATGTCAAGTTTTTGT 1118
|||||||||||||||| ||||| ||||| ||||||||||| ||||| |||||||||||||
Sbjct 1118 GGAGCCAAGTTACTGTAAATGGGACATGTAGCATATCTTCCTCAGAAGTCAAGTTTTTGT 1177
Query 1119 TAGTTGATACAGTAAGAGCAAAAGTGTGGGCTGTGCAG-CACCTCTCATTCTCACTATGG 1177
||| |||| |||||||||| |||||||||||||||||| || |||||||||||| | |||
Sbjct 1178 TAGCTGATTCAGTAAGAGCTAAAGTGTGGGCTGTGCAGTCA-CTCTCATTCTCAATCTGG 1236
Query 1178 GATGCTCAGAATAAAGAGCTTCTGAAAGTTTTTAATATTGATGGGCAAGTTGAAAATCGT 1237
||||||| || |||||| |||||||||||||| ||| |||| ||||||||||| ||||||
Sbjct 1237 GATGCTCGGAGTAAAGACCTTCTGAAAGTTTTAAATGTTGACGGGCAAGTTGAGAATCGT 1296
Query 1238 GTGGA-CATGCCACCAACGCAAGGTCAACAAGTTGA--A-GACACGAAAGC-GAAGTTCT 1292
| ||| | ||||||| | |||| ||||||||||| | || | |||| | ||||||||
Sbjct 1297 GGGGATC-TGCCACCTATACAAGACCAACAAGTTGATGATGAAATGAAA-CTGAAGTTCT 1354
Query 1293 TCTCCGCACCAAAAAAGGAGAAA-TCACAGGGCTTTTTGCAAAGATCGCGCCATGCCATA 1351
|||| || |||||| ||| ||| ||||||||||| |||| |||| || ||||||||
Sbjct 1355 TCTCAGCTTCAAAAAGGGA-AAAGCCACAGGGCTTTCTGCAGCGATCACGTAATGCCATA 1413
Query 1352 ATGGGAGCTGCAGGAGCTGTTCGTCGAGCT-GCCACTAGAAGTACAGGAGC-TTTTGCAG 1409
|||||||| |||||||||||||| |||| | |||||||||||| ||||||| |||| | |
Sbjct 1414 ATGGGAGCGGCAGGAGCTGTTCGCCGAG-TCGCCACTAGAAGTGCAGGAGCGTTTT-CGG 1471
Query 1410 AAGACACTAGGAAAGTAGAAGCTATTGCGATAGCGGCAGATGGATCAATTTGGACTGGAA 1469
|||| ||||||||| ||||||||| | | |||| | ||||||| |||||||||||||||
Sbjct 1472 AAGATACTAGGAAAACAGAAGCTATCGTGTTAGCTGTAGATGGAACAATTTGGACTGGAA 1531
Query 1470 GCATGAA-TGGCGTAATTGCTCAGTGGGACGGAAATGGAAGCCGCTTGCGGGAGGTGAAT 1528
|||| || |||| |||||| ||||||||| |||||||||| ||||||||| || ||||||
Sbjct 1532 GCAT-AAGTGGCCTAATTGTTCAGTGGGATGGAAATGGAAACCGCTTGCGAGATGTGAAT 1590
Query 1529 CATCATCAGCAGG-CTGTTCTGTGCTTTTGCACCTTTGGTGATCGAATATATGTGGGTTA 1587
|| ||||| | || ||||| ||||||||||||| ||||||||||||||||||||||||||
Sbjct 1591 CACCATCA-CCGGCCTGTTTTGTGCTTTTGCACTTTTGGTGATCGAATATATGTGGGTTA 1649
Query 1588 TGCAAGTGGTTACATCCAGGTCTTGGATCTT-GGTGGAAAGCTAATTGCAAGCTGGGTTT 1646
||||||||| |||||||||||||||||| || | |||||||||||| ||||||||||||
Sbjct 1650 TGCAAGTGGCTACATCCAGGTCTTGGAT-TTAGACGGAAAGCTAATTTCAAGCTGGGTTT 1708
Query 1647 CACACAATGAACCTGTGATAAAGCTAGCAGCAGGTGGTGGTTTCATTTTTAGTTTAGCCA 1706
||||||||||||||||||||||||||||||||||||||||||||||||| ||| | ||||
Sbjct 1709 CACACAATGAACCTGTGATAAAGCTAGCAGCAGGTGGTGGTTTCATTTTCAGTCTGGCCA 1768
Query 1707 CTCATGGTGGTGTAAGAGGATGGTATGTGACATCTCCAGGACCTCTAGACAGCGTAATCC 1766
|||||||||| ||| |||||||||||||||||||||||||||| || |||| | ||||||
Sbjct 1769 CTCATGGTGGAGTACGAGGATGGTATGTGACATCTCCAGGACCCCTGGACAACATAATCC 1828
Query 1767 GAACAGAATTGTCTCAAAAGGAAA-TGACATATGCCCGACAAGACAGTGTTAAAATCTTG 1825
|||| ||||||||||| ||||||| | ||||||| ||||||||| ||||| ||| ||
Sbjct 1829 GAACGGAATTGTCTCAGAAGGAAACTTT-ATATGCCAGACAAGACAATGTTAGAATTTTA 1887
Query 1826 ATTGGTACCTGGAATGTTGGTGAAGGACGGGCTTCACGCGGA-GCGCTTGTGTCTTGGCT 1884
||||||||||||||||||||| ||||| ||||||||| | | || ||| |||| |||||
Sbjct 1888 ATTGGTACCTGGAATGTTGGTCAAGGAAGGGCTTCACATG-ATGCACTTATGTCGTGGCT 1946
Query 1885 GGGTTCTG-CTGTTTCAGATGTTGGCATTGTCGCTGTTGGCTTGCAAGAGGTGGATATGG 1943
||| |||| | || ||||||| ||||||||||||||||| |||||||||||||| ||||
Sbjct 1947 GGGCTCTGTCACTT-CAGATGTAGGCATTGTCGCTGTTGGGTTGCAAGAGGTGGAGATGG 2005
Query 1944 GGGCTGGTTTCCTAGCCATGTCCACTGCTAAGGAAACGGTAGGGGTTGAAGGAAGTGCCG 2003
|||| || ||||| |||||||| ||||||| |||||||| || |||||||||||||||
Sbjct 2006 GGGCAGGCTTCCTTGCCATGTCTGCTGCTAAAGAAACGGTTGGACTTGAAGGAAGTGCCG 2065
Query 2004 TGGGCCAGTGGTGGCTTGATGCAATTGGAAATGCACTGGATGAGAGAAATACTTTCGAAC 2063
|||| || |||||| |||||||||||||||| || || ||||||| ||| |||||||| |
Sbjct 2066 TGGGGCAATGGTGGATTGATGCAATTGGAAAAGCCCTTGATGAGAAAAACACTTTCGAGC 2125
Query 2064 GTATGGGTTCAAGGCAATTGGCAGGACTGCTAATATCTCTTTGGGTGAGGAAG-AGTATT 2122
|||||||||||||||| ||||||||||| || ||||||||||||| ||||||| | ||||
Sbjct 2126 GTATGGGTTCAAGGCAGTTGGCAGGACTTCTGATATCTCTTTGGGCGAGGAAGGA-TATT 2184
Query 2123 AGAACACATGTCGGGGATCTTGATGTCGCAGCAGTTCCTTGTGGATTTGGCCGCGCCATT 2182
||||| ||||| || ||||||||||| ||||||||||| ||||| |||||||| ||||||
Sbjct 2185 AGAACTCATGTTGGAGATCTTGATGTTGCAGCAGTTCCATGTGGTTTTGGCCGTGCCATT 2244
Query 2183 GGGAACAAGGGAGGTGTGGGTTTGAGAATCAGAGTTTATGACCGGATTATGTGCTTTGTG 2242
|| |||||||||||||| ||| |||||||||||||||||||||| || ||||||||||||
Sbjct 2245 GGCAACAAGGGAGGTGTAGGTCTGAGAATCAGAGTTTATGACCGAATAATGTGCTTTGTG 2304
Query 2243 AACTGTCACTTGGCTGCTCACTTGGAGGCAGTTACTCGGAGAAACGCGGATTTCAATCAC 2302
|| || ||||||||||| ||||||||||| |||| ||| |||||||| ||||||||||||
Sbjct 2305 AATTGCCACTTGGCTGCACACTTGGAGGCGGTTAATCGCAGAAACGCAGATTTCAATCAC 2364
Query 2303 ATATATCGGTCAATGGTCTTTTCCAAAGGACAAAGTGTATA-TA-CTGCTGCAGCTG 2357
|| | ||| | |||||||||||| |||||||| | || | || | ||||||||||
Sbjct 2365 ATTTTTCGATTGATGGTCTTTTCCCGAGGACAAAATCTA-AGTAAC-GCTGCAGCTG 2419
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 181052497287
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5