BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg482115
Length=4674
Score E
Sequences producing significant alignments: (Bits) Value
AT2G31900.1 | Symbols: XIF, ATXIF, ATMYO5 | myosin-like protein... 7769 0.0
AT3G58160.1 | Symbols: XIJ, ATXIJ, ATMYOS3, MYA3, XI-16 | P-loo... 510 4e-143
AT2G31902.1 | Symbols: | Potential natural antisense gene, loc... 296 1e-78
> AT2G31900.1 | Symbols: XIF, ATXIF, ATMYO5 | myosin-like protein
XIF | chr2:13560760-13569623 REVERSE LENGTH=4671
Length=4671
Score = 7769 bits (4207), Expect = 0.0
Identities = 4521/4676 (97%), Gaps = 7/4676 (0%)
Strand=Plus/Plus
Query 1 ATGGGGACTCCTGTAAATATCACACTCGGGTCACATGTCTGGGTCGAGGATCTAGAACTC 60
||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||
Sbjct 1 ATGGGGACTCCTGTAAATATCACACTCGGATCACATGTCTGGGTCGAGGATCCAGAACTC 60
Query 61 GCATGGATTAGTGGAGAAGTGATTGAAATCAAAGGCACCAATGCCAAAATAGTCACTGCA 120
|||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 61 GCATGGATCAGTGGAGAAGTGACTGAAATCAAAGGCACCAATGCCAAAATAGTCACTGCA 120
Query 121 AATGGGAAAACTGTTGTTGCTAGTATTTCTAGTATATATCCAAAGGATACAGAGGCGCCG 180
|| |||||||| ||||||||||||||||||||||| |||||||||||||||||||| |||
Sbjct 121 AACGGGAAAACAGTTGTTGCTAGTATTTCTAGTATCTATCCAAAGGATACAGAGGCTCCG 180
Query 181 CCTGCAGGTGTTGACGACATGACTAAACTGGCTTACCTCCATGAGCCAGGGGTCCTCCAC 240
|||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 181 CCTGCAGGAGTTGACGACATGACTAAACTGGCTTACCTCCATGAGCCAGGGGTACTCCAC 240
Query 241 AATCTAGATTGCCGTTTTGCATTAAACGAGATATATACTTACACCGGAAACATCTTGATT 300
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 241 AATCTCGATTGCCGTTTTGCATTAAACGAGATATATACTTACACCGGAAACATCTTGATT 300
Query 301 GCGGTGAATCCATTCCAAAGACTTCCGCATTTGTATAGTGTCCATATGATGGAGCAATAT 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 301 GCGGTGAATCCATTCCAAAGACTTCCGCATTTGTATAGTGTCCATATGATGGAGCAATAT 360
Query 361 AAAGGAGCTGCGTTTGGAGAGCTAAGCCCGCATCTGTTTGCTGTTGCAGATACCAGTTAC 420
|||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||
Sbjct 361 AAAGGAGCTGCGTTTGGAGAGCTAAGTCCGCATCTGTTTGCTGTTGCAGACACCAGTTAC 420
Query 421 AGGGCGATGATTAATGAGGCAAGAAGCCAGTCTATTTTGGTTAGTGGAGAGAGCGGAGCT 480
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 421 AGGGCGATGATTAATGAGGCAAGAAGCCAGTCCATTTTGGTTAGTGGAGAGAGCGGAGCT 480
Query 481 GGAAAAACAGAGACAACCAAAATGCTCATGAGATATCTTGCATTCATGGGAGGCAGATCA 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 481 GGAAAAACAGAGACAACCAAAATGCTCATGAGATATCTTGCATTCATGGGAGGCAGATCA 540
Query 541 GATACCGAAGGGAGAAGCGTTGAACAACAAGTTTTAGAGTCTAATCCAGTGTTGGAAGCT 600
||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||
Sbjct 541 GATACCGAAGGGAGAAGCGTTGAACAACAAGTTTTAGAGTCTAATCCAGTGCTCGAAGCT 600
Query 601 TTTGGAAACGCCAAAACTGTGAAAAACAACAATTCAAGTCGGTTTGGAAAATTTGTTGAG 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 601 TTTGGAAACGCCAAAACTGTGAAAAACAACAATTCAAGTCGGTTTGGAAAATTTGTTGAG 660
Query 661 ATCCAATTTGACAAGCGTGGGAAAATATCTGGAGCTGCCATCCGCACTTATCTTCTTGAA 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 661 ATCCAATTTGACAAGCGTGGGAAAATATCTGGAGCTGCCATCCGCACTTATCTTCTTGAA 720
Query 721 CGGTCTCGTGTTTGCCAAGTTTCAGACCCTGAGAGGAACTATCACTGCTTCTACATGCTC 780
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 721 CGGTCTCGTGTTTGCCAAGTTTCAGACCCAGAGAGGAACTATCACTGCTTCTACATGCTC 780
Query 781 TGTGCAGCACCGCCTGAGGAAGCTAAGAAATTCAAGGTAGGGGATCCAAGGACGTTCCAC 840
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 781 TGTGCAGCACCGCCTGAGGAAGCTAAGAAATTCAAGGTAGGAGATCCAAGGACGTTCCAC 840
Query 841 TATCTAAACCAGACGAACTGCTATGAGGTTTCCAATGTAGATGATGCAAGAGAGTATATT 900
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||
Sbjct 841 TATCTAAACCAGACGAACTGCTACGAGGTTTCCAATGTAGATGATGCAAGAGAGTAT-TT 899
Query 901 -GAGACTAGAAATGCCATGGACATTGTGGGCATTGGACAAGAGGCACAGGATGCCATATT 959
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 900 AGAGACCAGAAATGCCATGGACATTGTGGGCATTGGACAAGAGGCACAGGATGCCATATT 959
Query 960 CCGAGTCGTAGCTGCAATCCTCCACCTTGGAAATGTCAATTTTATCAAAGGAGAAGAAGC 1019
|||||| |||||||| |||||||||||||| |||||||||||||||||||||||||||||
Sbjct 960 CCGAGTTGTAGCTGCGATCCTCCACCTTGGGAATGTCAATTTTATCAAAGGAGAAGAAGC 1019
Query 1020 AGATTCTTCAAAACTCAGGGATGATAAATCAAGATATCATCTTCAAACAGCAGCAGAATT 1079
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1020 AGATTCTTCAAAACTCAGGGATGATAAGTCAAGATATCATCTTCAAACAGCAGCAGAATT 1079
Query 1080 ACTCATGTGCAATGAGAAGATGATGGAAGATTCACTCTGCAAGCGTGTTATTGTCACTCC 1139
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1080 ACTCATGTGCAATGAGAAGATGATGGAAGATTCACTCTGCAAGCGTGTTATTGTCACTCC 1139
Query 1140 GGATGGTAACATTACAAAGCCGCTTGACCCAGAATCAGCAGCCTCAAATCGTGATGCTTT 1199
||||||||||||||||||||||||||| |||||||| ||||||||||| |||||||||||
Sbjct 1140 GGATGGTAACATTACAAAGCCGCTTGATCCAGAATCGGCAGCCTCAAACCGTGATGCTTT 1199
Query 1200 AGCCAAGACAGTATACTCCAGGCTGTTTGACTGGATTGTGGATAAGATCAACAGTTCAAT 1259
|||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1200 AGCCAAGACAGTGTACTCCAGGCTGTTTGACTGGATTGTAGATAAGATCAACAGTTCAAT 1259
Query 1260 AGGTCAAGACCCAAATGCTAAAAGCTTGATCGGAGTCCTCGACATTTATGGTTTTGAAAG 1319
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1260 AGGTCAAGACCCGGATGCTAAAAGCTTGATCGGAGTCCTCGACATTTATGGTTTTGAAAG 1319
Query 1320 CTTCAAAATCAACAGTTTTGAGCAGCTATGCATCAATCTCACAAATGAGAAATTACAACA 1379
|||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1320 CTTCAAGATCAACAGTTTTGAGCAGCTATGCATCAATCTCACAAATGAGAAGTTACAACA 1379
Query 1380 GCATTTCAATCAGCATGTATTCAAGATGGAGCAAGAGGAATACACGAGGGAGGAAATAAA 1439
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1380 GCATTTCAATCAGCATGTATTCAAGATGGAGCAAGAGGAATACACGAGGGAGGAAATAAA 1439
Query 1440 CTGGAGCTATGTTGAATTTGTTGATAACCAGGATGTCTTAGATCTTATTGAGAAGAAACC 1499
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1440 CTGGAGCTATGTTGAATTTGTTGATAACCAGGATGTCTTAGATCTTATTGAGAAGAAACC 1499
Query 1500 AGGAGGCATAATTGCCCTACTTGATGAAGCATGCATGTTTCCCAAGTCGACTCATGAGAC 1559
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1500 AGGAGGCATAATTGCCCTACTTGATGAAGCATGCATGTTTCCCAAGTCGACTCATGAGAC 1559
Query 1560 GTTTGCACAGAAGATGTATCAAACATATAAAGGACACAAGCGTTTCAGCAAACCTAAGCT 1619
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1560 GTTTGCACAGAAGATGTATCAAACATATAAGGGACACAAGCGTTTCAGCAAACCTAAGCT 1619
Query 1620 TGCCCAAACAGCCTTCACTGTTAACCACTATGCAGGAGATGTTACGTATTCAGCGGAGCA 1679
||||||||||||||||||||| |||||||||||||||||||||||||| ||||| |||||
Sbjct 1620 TGCCCAAACAGCCTTCACTGTCAACCACTATGCAGGAGATGTTACGTACTCAGCAGAGCA 1679
Query 1680 ATTTCTTGACAAGAACAAGGATTATGTTGTGGCAGAACATCAAGCTTTGCTAGATGCATC 1739
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1680 ATTTCTTGACAAAAACAAGGATTATGTTGTGGCAGAACATCAAGCTTTGCTAGATGCATC 1739
Query 1740 GAAGTGCTCTTTTGTCGCCAATTTGTTTCCACCACTTCCAGAAGACGCATCAAAGCAGTC 1799
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1740 TAAGTGCTCTTTTGTCGCCAATTTGTTTCCACCACTTCCAGAAGACGCATCAAAGCAGTC 1799
Query 1800 CAAATTTTCATCCATAGGGACCCGTTTCAAGCAACAACTCCAAGCTCTAATGGAGACGCT 1859
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1800 CAAATTTTCATCCATAGGGACCCGTTTCAAGCAACAACTCCAAGCTCTAATGGAGACGCT 1859
Query 1860 GAACACAACAGAGCCCCATTATATTAGATGTGTGAAGCCAAATGCAGTTCTGAAGCCCGG 1919
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1860 GAACACAACAGAGCCCCATTATATTAGATGTGTGAAACCAAATGCAGTTCTGAAGCCCGG 1919
Query 1920 GATTTTCGAGAATGACAACGTCCTAAACCAACTAAGATGCGGAGGTGTACTGGAAGCTAT 1979
||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1920 AATTTTTGAGAACGACAACGTCCTAAACCAACTAAGATGCGGAGGTGTACTGGAAGCTAT 1979
Query 1980 AAGAATCAGTTGTGCTGGTTATCCAACAAAACGAGCTTTCGATGAATTCCTAGATCGTTT 2039
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1980 AAGAATCAGTTGTGCTGGTTATCCAACGAAACGAGCTTTCGATGAATTCCTAGATCGTTT 2039
Query 2040 TGTGATGTTAGCAACAGACGTTCCAGAGGGAACCGACGAAAAATCGGCATGTGCTTCGAT 2099
||||||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||||
Sbjct 2040 TGTGATGCTAGCAACAGACGTTCCAGAGGGATCCGACGAAAAATCCGCATGTGCTTCGAT 2099
Query 2100 CTGCGACAAGATGGGTTTAAAAGGCTACCAGATAGGAAAAACAAAGATATTTCTTAGGGC 2159
|||| ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||
Sbjct 2100 CTGCAACAAGATGGGTCTAAAAGGCTACCAGATAGGGAAAACAAAGATATTTCTTAGGGC 2159
Query 2160 CGGACAGATGGCTGAACTAGATGCAAGAAGAACCGAGGTCTTGGCTGGTGCCACTACACT 2219
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 2160 CGGACAGATGGCTGAACTAGATGCAAGAAGAACCGAGGTCTTGGCTGGTGCCACTAAACT 2219
Query 2220 CATTCAGAGGCAGATCAGGACTTATTTGACAAGAAAAGAGTTCCTTGGGCAGAAAAAGGC 2279
|||||||||||||||||| |||||| |||||||||||||||||||||||||||||| |||
Sbjct 2220 CATTCAGAGGCAGATCAGAACTTATCTGACAAGAAAAGAGTTCCTTGGGCAGAAAAGGGC 2279
Query 2280 TACAATTTATATGCAAAAACTTTGGAGAGCACAACTTGCTCGCAAGTTGTATCAAAACAT 2339
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 2280 TACAATTTATATGCAAAAACTTTGGAGAGCAAAACTTGCTCGCAAGTTGTATCAAAACAT 2339
Query 2340 GCGAAGAGAAGCTGCTTCAATTTGTATCCAAAAGAACATTCGTGCTCACAGAGCAAGGAA 2399
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2340 GAGAAGAGAAGCTGCTTCAATTTGTATCCAAAAGAACATTCGTGCTCACAGAGCAAGGAA 2399
Query 2400 AAACTACACTAAGCTCCAGGCATCAGCAACAGTTATTCAGACTGGTTTACGGACAATGTC 2459
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2400 AAACTATACTAAGCTCCAGGCATCAGCAACAGTTATTCAGACTGGTTTACGGACAATGTC 2459
Query 2460 TGCTCGAAACAAGCATAGACATAGAAGAAGAACAAAGGCAGCAATTATAGTTCAGAGGGA 2519
||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||
Sbjct 2460 TGCTCGAAACAAGCATAGACACAGAAGAAGAACAAAGGCAGCAATTATAATTCAGAGGGA 2519
Query 2520 ATGGAGAAGACACCAAGCTCACGAAGCTTATAAGCAGCACAAAAAAGCAACATTAGCATT 2579
||||||||||||||||| ||| |||||||||||| |||||||||||||||||||||||||
Sbjct 2520 ATGGAGAAGACACCAAGTTCATGAAGCTTATAAGAAGCACAAAAAAGCAACATTAGCATT 2579
Query 2580 ACAATGTCTATGGAGAGCTAAAGTAGCTCGAAAAGAGCTTAAAAATCTCAGAATGGCTGC 2639
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 2580 ACAATGTCTATGGAGAGCTAAAGTAGCTCGAAAAGAGCTAAAAAATCTCAGAATGGCTGC 2639
Query 2640 AAGAGAAACTGGGGCGCTCAAGGAAGCCAAGGACAAGTTAGAGAAACGTGTGGAAGAGCT 2699
|||||||||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct 2640 CAGAGAAACTGGGGCACTAAAGGAAGCCAAGGACAAGTTAGAGAAACGTGTGGAAGAGCT 2699
Query 2700 AACCTGGCGTCTCGAATTAGAGAAGCATCAAAAGGCTGATCTCGAAGAAGCCAAAGCACA 2759
||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||
Sbjct 2700 AACCTGGCGTCTCGAATTAGAGAAGAATCAAAAGGCTGATCTCGAAGACGCCAAAGCACA 2759
Query 2760 AGAAATTGCTAGACTACAAAATAATTTAACTGAATTGCAAGAGAAGCTAGATGAAGCCTA 2819
|||||| || | ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2760 AGAAATCGCAAAACTACAAAATAATTTAACTGAATTGCAAGAGAAGCTAGATGAAGCCTA 2819
Query 2820 CGCTGCAATTATACGAGAGAAAGAAGCAGCAAAATTAGTCATTGAACAAGCTCCACCAGT 2879
||||||||| |||||||| ||||||||||||||||||| ||||||||||||||||||| |
Sbjct 2820 CGCTGCAATCATACGAGACAAAGAAGCAGCAAAATTAGCCATTGAACAAGCTCCACCAAT 2879
Query 2880 CATCAAAGAGGTTCCAGTTGTAGATAACACTCAACTGGAGTTACTGAACAGTCAAAACAA 2939
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2880 CATCAAAGAGGTTCCAGTTGTAGATAACACTCAACTGGAGTTACTGAACAGTCAAAACAA 2939
Query 2940 TGAGCTGGAGGTTGAGGTGGCAAAACTAAAAGGAAAAATTGAGGAGTTTGAAGCGAAATG 2999
||| |||||||||||||| || ||| |||||||||||||| |||||||||||| ||||||
Sbjct 2940 TGAACTGGAGGTTGAGGTAGCTAAATTAAAAGGAAAAATTAAGGAGTTTGAAGTGAAATG 2999
Query 3000 TTCTGCACTTGAGAGTGATAGCAAGGCAAGTCTAACTGAAGCAGAAGATGCAAAATCAAA 3059
|| ||||||||||| |||||||| ||||||| ||||||||||||||||||||||||||||
Sbjct 3000 TTTTGCACTTGAGAATGATAGCAGGGCAAGTGTAACTGAAGCAGAAGATGCAAAATCAAA 3059
Query 3060 GGCCATCCAATTTCAAGAAATCATCGAAAGATTACAAACGAACCTGTCAAACCTTGAATC 3119
|||| || |||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 3060 GGCCGTCGAATTTCAAGAAATCATCGAAAGATTACATACGAACCTGTCAAACCTTGAATC 3119
Query 3120 CGAAAATCAGGTCTTGCGTCAGCAGGCTTTGGCCGCTTCAACAAGCGTTGAAGAGACTGG 3179
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 3120 CGAAAATCAGGTTTTGCGTCAGCAGGCTTTGGCCGCTTCAACAAGCGTTGAAGAGATTGG 3179
Query 3180 AGAGTTAAACAGCCTGAAGGATAAGGTTGCAATTCTAGAGTCAGAAAATGAATCTCTTCG 3239
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 3180 AGAGTTAAACAGCCTGAAGGATAAGGTTGCAATTCTAGAGTCAGAAAATGAAACTCTTCG 3239
Query 3240 AAGACAGACAGCTTCTGCAGAAAAGACAATGCCTCCTGCAAGAGTTTTTGCGTCCGAAAA 3299
||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 3240 AAGACAGACAGAGTCTGCAGAAAAGACAATGCCTCCTGCAAGAGTTTTTGCGTCTGAAAA 3299
Query 3300 GAATCTTGAAAATCAACATCAAATAAAAGAAATTCAGGCAACAAAGGAACCAAGGAATCC 3359
||||||||||||| ||||||||| |||||| ||||||||||||||||| |||||||||||
Sbjct 3300 GAATCTTGAAAATGAACATCAAACAAAAGAGATTCAGGCAACAAAGGAGCCAAGGAATCC 3359
Query 3360 AATCAATGTGTTAGCAAAACAAGGGTCTCTAACAGATAGGCAACGGGAGAGCCATGAGGT 3419
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 3360 AATCAATGTGTTAGCAAAACAAGGGTCTCTAACAGATAGGCAACAGGAGAGCCATGAGGT 3419
Query 3420 GCTGATGAAATGCCTCACTGACGAGAGAAGGTTTGATAACGACAGATGTGTGGCAGCTTG 3479
||| |||||||||||||| ||||||||||||||||||||||| | || ||||||||||||
Sbjct 3420 GCTTATGAAATGCCTCACCGACGAGAGAAGGTTTGATAACGAAAAATCTGTGGCAGCTTG 3479
Query 3480 GATAGTTTACAAGGCACTACTTCAATGGAGATTATTTGAAGCAGAGAAAACAAACATATT 3539
|||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 3480 GATAGTGTACAAGGCATTACTTCAATGGAGATTATTTGAAGCAGAGAAAACAAACATATT 3539
Query 3540 TGATAGAATTGTTCATAAGATTCGATCGTCCATTGAGAAGAGCCAAGATGACACAAGGGA 3599
||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||
Sbjct 3540 TGATAGAATTGTTCATAAGATTCGATCGTCCATTGAG--G-GCCAAGATGACACAAGGGA 3596
Query 3600 ACTAGCTTATTGGCTCACAACAAGCTCTACCCTCTTATATCTTCTCCAATCTACACTCAA 3659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3597 ACTAGCTTATTGGCTCACAACAAGCTCTACCCTCTTATATCTTCTCCAATCTACACTCAA 3656
Query 3660 GTTCAGCAATACAAATAATGCGGCTTCAAGACGTAATAGATTATCCCATGCTACACTATT 3719
|||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||
Sbjct 3657 GTTCAGCAATACAAATAATGCGGCTTCAAGACGTAACAGATCATCCCATGCTACACTATT 3716
Query 3720 TGGGCGATTGGTTCAAGGAACACAATCATCTTCAGTGGGCTTGGAAACATCCAGTGGCTA 3779
|||| ||||||||||||||| ||| ||||||||||||| |||||||||||||| || ||
Sbjct 3717 TGGGAGATTGGTTCAAGGAATGCAACCATCTTCAGTGGGATTGGAAACATCCAGCGGTTA 3776
Query 3780 CAGTGGGATGGTTGGAATTTCAAATGACCAACAGATGGTCGAAGCTAAATATCCGGCTTT 3839
||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 3777 CAGTGGGATGGCTGGAATACCAAATGACCAACAGATGGTCGAAGCTAAATATCCGGCTTT 3836
Query 3840 ACTATTCAAGCAACATTTAGCAGCATACGTTGAGAAAACATATGGCATGATCCGAGATAA 3899
||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| ||
Sbjct 3837 ACTATTCAAGCAACACTTAGCAGCATACGTTGAGAAAACATATGGAATGATCCGAGACAA 3896
Query 3900 ACTAAAGAAAGAGATAGATCCATTACTAAATCTCTGTATCCATGCACCAAGACCAACAAG 3959
| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 3897 ATTAAAGAAAGAGATAAATCCATTACTAAATCTCTGTATCCATGCACCAAGACCAACAAG 3956
Query 3960 AGCCAAAACCTTGCGAGATGTGACTAAAAGCATCCACTTGACCACAATTGCCAAGCAACA 4019
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3957 AGCCAAAACCTTGCGAGATGTGACTAAAAGCATCCACTTGACCACAATTGCCAAGCAACA 4016
Query 4020 AGCATCATATGTACAATGGCAGAACATTGTCAACAAGCTTGAACATACCTTGACCTTTAT 4079
||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||
Sbjct 4017 AGCATCATATGTACAGTGGCAGAACATTGTCAACAAGCTTGAACATACCTTGACTTTTAT 4076
Query 4080 GGCAGAGAACCAGGTCCCATCTATGATCACAAGAAAACTCTTCCATCAGGTTTTCTCGTA 4139
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4077 GGCAGAGAACCATGTCCCATCTATGATCACAAGAAAACTCTTCCATCAGGTTTTCTCGTA 4136
Query 4140 CATCAATGTGCAGCTCTTTAATAGTTTGTTGCTTCGCCGAGAGTGTTGTTCGGTTAGCAA 4199
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 4137 CATCAATGTGCAGCTCTTTAATAGTTTGTTGCTTCGCCGAGAGTGTTGTTCAGTTAGCAA 4196
Query 4200 CGGAGAATATCTTAAAATGGGCTTGCATGAATTAGAG-AAGTGGTGCCTGAAGGCAGACG 4258
|||||||| || |||||||||||||||||||||||| || ||||||||||||||||| |
Sbjct 4197 TGGAGAATACCTAAAAATGGGCTTGCATGAATTAGAGCAA-TGGTGCCTGAAGGCAGATG 4255
Query 4259 ACGAGGCAGCACGATCACCATGGGATGAACTTCAGCACATAAGGCAAGCAGTGATGTTTC 4318
|||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 4256 ACGAGGCAACACGATCACCATGGGATGAACTTCAACACATAAGGCAAGCAGTGATGTTTC 4315
Query 4319 TGGTCTCACATCAAAAGACACAGAAATCATTGGACGAGATTGCAAAAGAAATATTCCCGG 4378
||||||||||||||||||||||||||||||||||||| || |||||||| |||| |||||
Sbjct 4316 TGGTCTCACATCAAAAGACACAGAAATCATTGGACGAAATCGCAAAAGAGATATGCCCGG 4375
Query 4379 TACTAAGCATTCCACAAGTATATCGAATTGGGACTATGTTTTGGGACGACAAATATGGAA 4438
|||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||
Sbjct 4376 TACTAAGCATTCCACAAGTATATCGAATCGGGACTATGTTTTGGGACGACAAATACGGAA 4435
Query 4439 CTCAAGGACTCTCCCCTGAGGTGATCAATCAGATGAGGAAACTAATGGCGGAAGATTCAG 4498
|||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||
Sbjct 4436 CTCAAGGACTCTCCCCCGAGGTGATCAATCAGATGAGGAAACTAATGACGGAAGATTCAG 4495
Query 4499 CCAACATGACTTACCCTTCTTTCTTGCTAGACGTCGATTCAAGCATTCCTTTCTCAGTGG 4558
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4496 CGAACATGACTTACCCTTCTTTCTTGCTAGACGTCGATTCAAGCATTCCTTTCTCAGTGG 4555
Query 4559 AAGATGTTTCGCAATCTTTCCACGGCGGCAACATTAGTCTCTCCGACGTCGATCCACCGC 4618
|||||||||||||||| ||||||||||| |||||||| |||||||||||||||||| |||
Sbjct 4556 AAGATGTTTCGCAATCCTTCCACGGCGGTAACATTAGCCTCTCCGACGTCGATCCATCGC 4615
Query 4619 CGCTTCTCCGCCAGCGATCTGATTTTCACTTCTTGTTCCAGACATTGCCGGAGTAA 4674
|||||||||||||||||||||||||||||||||| ||||||||||||||||| |||
Sbjct 4616 CGCTTCTCCGCCAGCGATCTGATTTTCACTTCTTATTCCAGACATTGCCGGAATAA 4671
> AT3G58160.1 | Symbols: XIJ, ATXIJ, ATMYOS3, MYA3, XI-16 | P-loop
containing nucleoside triphosphate hydrolases superfamily
protein | chr3:21534797-21541877 FORWARD LENGTH=3729
Length=3729
Score = 510 bits (276), Expect = 4e-143
Identities = 1127/1526 (74%), Gaps = 105/1526 (7%)
Strand=Plus/Plus
Query 427 ATGATTAATGA-GGCAAGAAGCCAGTCTATTTTGGTTAGTGGAGAGAGCGGAG-CTGGAA 484
||||||||||| |||| ||| | | | ||| ||||| ||||| || || || | ||||||
Sbjct 421 ATGATTAATGAGGGCAGGAA-CAAATGTATATTGGTCAGTGGTGAAAGTGG-GTCTGGAA 478
Query 485 AAACAGAGACAACCAAAATGCTCATGAGATATCTTGCATTCATGGGAGG-CAGA-T-CAG 541
| ||||| ||||| |||||||||||| | || ||||||| | | || || || | | |||
Sbjct 479 AGACAGAAACAACTAAAATGCTCATGCGTTACCTTGCATACTTTGGTGGACATACTGCAG 538
Query 542 ATACCGAAGGGAGAAGC-GTTGAACAA-CAAGTTTTAGAGTCTAATCCAG-TGTTGGAAG 598
| ||||| || | | |||||| || ||||||||||| || ||||||| | || || |
Sbjct 539 -T--TGAAGGAAGGA-CAGTTGAA-AACCAAGTTTTAGAATCAAATCCAGTTCTT-GAGG 592
Query 599 CTTTTGGAAACGCCAAAACTGTGAAAAACAACAATTCAAGTCGGTTTGGAAAATTTGTTG 658
| ||||| || || || ||||| || ||||||||||| || || |||||||||||||| |
Sbjct 593 CATTTGGTAATGCGAAGACTGTTAAGAACAACAATTCCAGCCGTTTTGGAAAATTTGTGG 652
Query 659 AGATCCAATTTGACAAGCGTGGG-AAAATATCTGGAGCTGCCATCCGCACTTATCTTCTT 717
|||| || ||||| | |||||| |||||| || || |||||| | ||||| ||| ||
Sbjct 653 AGATTCAGTTTGATGA-CGTGGGCCGAATATCAGGGGCAGCCATCAGAACTTACCTT-TT 710
Query 718 -GA-ACGGTCTCGTGTTTGCCAAGTTTCAGACCCTGAGA-GGAACTATCACTGCTTCTA- 773
|| | |||| |||||||||||||||||||| ||||| | | |||||||||||||| ||
Sbjct 711 GGAGA-GGTCACGTGTTTGCCAAGTTTCAGATCCTGA-ACGTAACTATCACTGCTTTTAT 768
Query 774 CATGCTCTGTGCAGCACCGCCTGAGGAAGCTAAGAAATTCAAGGTAGGGGATCC-AAGGA 832
| | || ||||| || || |||||||| | | ||| || ||| | |||||||| || |
Sbjct 769 C-TCCTGTGTGCTGCTCCTCCTGAGGATGTTGAGAGGTTTAAGTTGGGGGATCCTAA-GT 826
Query 833 CGTTCCACTATCTAAACCAGA-CGAACTGCTATGAGGTTTCCAATGTAGATGATGCAAGA 891
| || | |||||| ||||| | | | |||||| | || |||| ||||||| |||
Sbjct 827 CATTTCGCTATCTTAACCA-ATCTAGCTGCTACAAACTTGATGGTGTAAATGATGC-AGA 884
Query 892 -GAGTATATTGAGACTAGAAATGCCATGGACATTGTGGGCAT-TG-GACAAGAGGCACAG 948
|||||| ||| ||||||| || ||||| | || || || | || || | | ||||
Sbjct 885 GGAGTATCTTGCTACTAGAAGGGCTATGGATGTAGTTGGAATAAGTGA-AA-AAGAACAG 942
Query 949 GATGCCATATTCCGAGTCGTAGCTGCAATCCTCCACCTTGGAAAT-GTCAATTTTATC-A 1006
||||| || ||| |||| || ||| | || ||||| ||||||||| | || ||| || |
Sbjct 943 GATGCAATTTTCAGAGTTGTGGCTTCCATTCTCCATCTTGGAAATATTGAA-TTT-TCGA 1000
Query 1007 AAGGAGAAGAAGCAGATTCTTCAAAACTCAGGGATGATA-AATCAA-GATATCATCTTCA 1064
| |||||||| || ||||| ||| | | | ||||| | | |||| | | |||||| ||
Sbjct 1001 AGGGAGAAGATGCTGATTCATCATCAGTAAAAGATGA-ACAGTCAATG-TTTCATCTCCA 1058
Query 1065 AACAG-CAGCAGAATTACTCATGTGCAATGAGAAGAT-GATGGAAGATTCACTCTGCAAG 1122
|| | || ||||| | |||||||| || | | | |||||| | | || |||
Sbjct 1059 AA-TGACATCAGAACTGCTCATGTGTGATCCCCA-TTCCTTAGAAGATGCTTTGTGTAAG 1116
Query 1123 CGTGTTATTGTCACTCCGGATGGTAACATTA-CAA-AGCCG-CTTGA-CC-C-AGAATCA 1176
||| | || ||||| || || | || ||| ||| || | ||||| || | | |
Sbjct 1117 CGTATGATGGTCACCCCAGA-AG-AA-GTTATCAAGAGAAGTCTTGATCCTCTTG-GT-- 1170
Query 1177 GCAGCCTCAAATC-GTGATGCTTTAGCCAAGACAGTATACTCCAGGCTGTTTGACTGGAT 1235
|| ||| | | | |||| ||| || |||||| ||||||| || || ||||| ||| |
Sbjct 1171 GCTGCC-GTTAGCAGGGATGGTTTGGCAAAGACAATATACTCTAGACTCTTTGATTGG-T 1228
Query 1236 T-GTGGATAAGATCAACAGT-TCAATAGGTCAAGA--CCCAAATGCTAAAAGCTTGATCG 1291
| ||| | || || || | | || || || ||||| | | | | ||| ||||||| |
Sbjct 1229 TGGTGAACAAAATAAATA-TCTCTATTGGGCAAGATTCTC-ACT-CTAGGCGCTTGATTG 1285
Query 1292 GAGTCCTCGACATTTATGGTTTTGAAAGCTTCAAAATCAACAGTTTTGAGCAGCTATGCA 1351
||||||| ||||| ||||||||||| ||||| |||| ||||||||||||||| | || |
Sbjct 1286 GAGTCCTTGACATCTATGGTTTTGAGAGCTTTAAAACCAACAGTTTTGAGCAATTCTGTA 1345
Query 1352 TCAATCT-CACAAATGAGAAA-TTACAACAGCATTTCAATCAGCATGTATTCAAGATGGA 1409
| ||| | ||| ||||| ||| | ||||||||||||||||||||||||||||| |||||
Sbjct 1346 TTAAT-TACACGAATGA-AAAGCTGCAACAGCATTTCAATCAGCATGTATTCAAAATGGA 1403
Query 1410 GCAAGAG-GAATA-CACGAGGGAGGAAATAAACTGGAGCTATGTTGAATTTGTTGATAAC 1467
|||| | ||||| || || || |||||| | ||||||||||| || |||||||||||
Sbjct 1404 ACAAG-GTGAATATCA-GAAAGAAGAAATAGATTGGAGCTATGTGGAGTTTGTTGATAAT 1461
Query 1468 CAGGATGTCTTAGATCTTATTGAGAAGAAACCAGGAGGCATAATTGCCCTACTTGATGAA 1527
| |||||| | ||||| ||||| |||||||| || || || ||||| || || ||||||
Sbjct 1462 AAAGATGTCGTGGATCTGATTGAAAAGAAACCGGGTGGTATTATTGCTCTGCTGGATGAA 1521
Query 1528 GCATGCATGTTTCCCAAGTCGACTCATGAGACGTTTGCACAGAAGATGTATCAAACATAT 1587
||||||||| | || || || |||| ||| || ||| | ||||| ||||||| |||| |
Sbjct 1522 GCATGCATGCTACCAAAATCAACTCCTGAAACATTTTCTGAGAAGCTGTATCACACAT-T 1580
Query 1588 AAAGGA-CACAAGCGTTTCA-GCAAACCTAAGCTTGCC-CAAACAGCCTTCACTGTTAAC 1644
||||| || ||||| |||| | ||||| || ||| | | | ||| || || |||
Sbjct 1581 CAAGGATCATAAGCGCTTCATG-AAACCAAAA-TTGACTCGATCAGATTTTACA-TTAGT 1637
Query 1645 -CACTATGCAGGAGATGTTACGTATTC-AG-CGGAGCAATTTCTT-GACAAGAACAAGGA 1700
|| |||||||| ||||| | || | || | || |||||| || ||||| ||||| ||
Sbjct 1638 TCATTATGCAGGGGATGTC-CA-ATACCAGTCCGATCAATTT-TTAGACAAAAACAAAGA 1694
Query 1701 TTATGTTGTGGCAGAACATCAAGCTTTGCTAGATGCATCGAAGTGCTCTTTTGTCGCCAA 1760
|||||||| || || ||||| | |||| || |||| || || || |||||||| | ||
Sbjct 1695 CTATGTTGTCGCCGAGCATCAGGATTTGTTAAATGCTTCCAAATGTTCTTTTGT-GTCAG 1753
Query 1761 TT-TGTTTCCACCACTTCC-AGAAGAC-GCATCAAAGCAGTCCAAATTTTCATCCATAGG 1817
| ||||| || ||||| | |||| | | |||| ||||| ||||| || || ||
Sbjct 1754 GCCTCTTTCCTCCTCTTCCTA-AAGAAAGTAGCAAA----TCCAAGTTTTCTTCAATTGG 1808
Query 1818 -GACCCGTTTCAAGCAACAACTCCAAGCT-CTAATGGAGACGCTGAACACAACAGAGCCC 1875
| | |||||||||| |||| | ||| | || |||||||| ||||| | || || |||
Sbjct 1809 CG-CTCGTTTCAAGCTACAATTGCAA-CAGCTGATGGAGACATTGAACTCTACGGAACCC 1866
Query 1876 CATTATATTAGATGTGTGAAGCCAAA 1901
|| || || |||||||| ||||||||
Sbjct 1867 CACTACATCAGATGTGTTAAGCCAAA 1892
> AT2G31902.1 | Symbols: | Potential natural antisense gene, locus
overlaps with AT2G31900 | chr2:13560807-13568489 FORWARD
LENGTH=1818
Length=1818
Score = 296 bits (160), Expect = 1e-78
Identities = 165/167 (99%), Gaps = 1/167 (1%)
Strand=Plus/Minus
Query 637 AGTCGGTTTGGAAAATTTGTTGAGATCCAATTTGACAAGCGTGGGAAAATATCTGGAGCT 696
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1746 AGTCGGTTTGGAAAATTTGTTGAGATCCAATTTGACAAGCGTGGGAAAATATCTGGAGCT 1687
Query 697 GCCATCCGCACTTATCTTCTTGAACGGTCTCGTGTTTGCCAAGTTTCAGACCCTGAGAGG 756
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1686 GCCATCCGCACTTATCTTCTTGAACGGTCTCGTGTTTGCCAAGTTTCAGACCCAGAGAGG 1627
Query 757 AACTATCACTGCTTCTACATGCTCTGTGCAGCACCGCCTGAGG-AAG 802
||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1626 AACTATCACTGCTTCTACATGCTCTGTGCAGCACCGCCTGAGGTAAG 1580
Score = 255 bits (138), Expect = 2e-66
Identities = 149/154 (97%), Gaps = 2/154 (1%)
Strand=Plus/Minus
Query 797 AGGAAGCTAAGAAATTCAAGGTAGGGGATCCAAGGACGTTCCACTATCTAAACCAGACGA 856
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1502 AGGAAGCTAAGAAATTCAAGGTAGGAGATCCAAGGACGTTCCACTATCTAAACCAGACGA 1443
Query 857 ACTGCTATGAGGTTTCCAATGTAGATGATGCAAGAGAGTATATT-GAGACTAGAAATGCC 915
||||||| ||||||||||||||||||||||||||||||||| || ||||| |||||||||
Sbjct 1442 ACTGCTACGAGGTTTCCAATGTAGATGATGCAAGAGAGTAT-TTAGAGACCAGAAATGCC 1384
Query 916 ATGGACATTGTGGGCATTGGACAAGAGGCACAGG 949
||||||||||||||||||||||||||||||||||
Sbjct 1383 ATGGACATTGTGGGCATTGGACAAGAGGCACAGG 1350
Score = 252 bits (136), Expect = 3e-65
Identities = 144/148 (97%), Gaps = 0/148 (0%)
Strand=Plus/Minus
Query 1086 GTGCAATGAGAAGATGATGGAAGATTCACTCTGCAAGCGTGTTATTGTCACTCCGGATGG 1145
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1168 GTGCAATGAGAAGATGATGGAAGATTCACTCTGCAAGCGTGTTATTGTCACTCCGGATGG 1109
Query 1146 TAACATTACAAAGCCGCTTGACCCAGAATCAGCAGCCTCAAATCGTGATGCTTTAGCCAA 1205
||||||||||||||||||||| |||||||| ||||||||||| |||||||||||||||||
Sbjct 1108 TAACATTACAAAGCCGCTTGATCCAGAATCGGCAGCCTCAAACCGTGATGCTTTAGCCAA 1049
Query 1206 GACAGTATACTCCAGGCTGTTTGACTGG 1233
|||||| |||||||||||||||||||||
Sbjct 1048 GACAGTGTACTCCAGGCTGTTTGACTGG 1021
Score = 178 bits (96), Expect = 5e-43
Identities = 102/105 (97%), Gaps = 0/105 (0%)
Strand=Plus/Minus
Query 3189 CAGCCTGAAGGATAAGGTTGCAATTCTAGAGTCAGAAAATGAATCTCTTCGAAGACAGAC 3248
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 643 CAGCCTGAAGGATAAGGTTGCAATTCTAGAGTCAGAAAATGAAACTCTTCGAAGACAGAC 584
Query 3249 AGCTTCTGCAGAAAAGACAATGCCTCCTGCAAGAGTTTTTGCGTC 3293
|| |||||||||||||||||||||||||||||||||||||||||
Sbjct 583 AGAGTCTGCAGAAAAGACAATGCCTCCTGCAAGAGTTTTTGCGTC 539
Score = 172 bits (93), Expect = 2e-41
Identities = 103/108 (95%), Gaps = 0/108 (0%)
Strand=Plus/Minus
Query 1227 TGACTGGATTGTGGATAAGATCAACAGTTCAATAGGTCAAGACCCAAATGCTAAAAGCTT 1286
|||| ||||||| |||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 918 TGACAGGATTGTAGATAAGATCAACAGTTCAATAGGTCAAGACCCGGATGCTAAAAGCTT 859
Query 1287 GATCGGAGTCCTCGACATTTATGGTTTTGAAAGCTTCAAAATCAACAG 1334
||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 858 GATCGGAGTCCTCGACATTTATGGTTTTGAAAGCTTCAAGATCAACAG 811
Score = 158 bits (85), Expect = 6e-37
Identities = 89/91 (98%), Gaps = 0/91 (0%)
Strand=Plus/Minus
Query 3101 ACCTGTCAAACCTTGAATCCGAAAATCAGGTCTTGCGTCAGCAGGCTTTGGCCGCTTCAA 3160
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 806 ACCTGTCAAACCTTGAATCCGAAAATCAGGTTTTGCGTCAGCAGGCTTTGGCCGCTTCAA 747
Query 3161 CAAGCGTTGAAGAGACTGGAGAGTTAAACAG 3191
||||||||||||||| |||||||||||||||
Sbjct 746 CAAGCGTTGAAGAGATTGGAGAGTTAAACAG 716
Score = 152 bits (82), Expect = 3e-35
Identities = 146/174 (84%), Gaps = 15/174 (9%)
Strand=Plus/Minus
Query 4162 AGTTTGTTGCTTCGCCGAGAGTGTTGTTCGGTTAGCAACGGAGAATATCTTAAAATGGGC 4221
||||||||||||||||||||||||||||| |||||||| |||||||| || |||||||||
Sbjct 374 AGTTTGTTGCTTCGCCGAGAGTGTTGTTCAGTTAGCAATGGAGAATACCTAAAAATGGGC 315
Query 4222 TTGCATGAATTAGAG-AAGTGGTGCCTGAAGGCAGA-C------GACG---A--GGCAGC 4268
||||||||||||||| || |||||| | || | | | | | | |||| |
Sbjct 314 TTGCATGAATTAGAGCAA-TGGTGCAT-AATTCTGTTCTTTTTTGTCTCCTACAGGCAAC 257
Query 4269 ACGATCACCATGGGATGAACTTCAGCACATAAGGCAAGCAGTGATGTTTCTGGT 4322
|||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 256 ACGATCACCATGGGATGAACTTCAACACATAAGGCAAGCAGTGATGTTTCTGGT 203
Score = 141 bits (76), Expect = 6e-32
Identities = 87/92 (95%), Gaps = 1/92 (1%)
Strand=Plus/Minus
Query 4536 TTCAAGCATTCCTTTCTCAGTGGAAGATGTTTCGCAATCTTTCCACGGCGGCAACATTAG 4595
||| ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct 91 TTC-AGCATTCCTTTCTCAGTGGAAGATGTTTCGCAATCCTTCCACGGCGGTAACATTAG 33
Query 4596 TCTCTCCGACGTCGATCCACCGCCGCTTCTCC 4627
|||||||||||||||||| ||||||||||||
Sbjct 32 CCTCTCCGACGTCGATCCATCGCCGCTTCTCC 1
Score = 54.7 bits (29), Expect = 8e-06
Identities = 29/29 (100%), Gaps = 0/29 (0%)
Strand=Plus/Minus
Query 4513 CCTTCTTTCTTGCTAGACGTCGATTCAAG 4541
|||||||||||||||||||||||||||||
Sbjct 185 CCTTCTTTCTTGCTAGACGTCGATTCAAG 157
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 233125784121
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5