BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg482126 Length=598 Score E Sequences producing significant alignments: (Bits) Value AT2G31980.1 | Symbols: AtCYS2, CYS2 | PHYTOCYSTATIN 2 | chr2:13... 843 0.0 > AT2G31980.1 | Symbols: AtCYS2, CYS2 | PHYTOCYSTATIN 2 | chr2:13609093-13609902 REVERSE LENGTH=729 Length=729 Score = 843 bits (456), Expect = 0.0 Identities = 538/577 (93%), Gaps = 7/577 (1%) Strand=Plus/Plus Query 1 TGAAACCTAAGAAGAAAACAAAAAGTGAGAAGCAATGGCTGCAATGTTGAAGGTCTCTCT 60 |||| ||||||||||| |||||||||||||||||||||| | ||||||||||||||||| Sbjct 99 TGAAGCCTAAGAAGAAGGCAAAAAGTGAGAAGCAATGGCTACCATGTTGAAGGTCTCTCT 158 Query 61 TATATTGTCATTGTTAGGGTTTCTGGTGATCGCTGTCGTGACTCCATCGGCGGCGAACCC 120 | |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 159 TGTATTGTCATTGTTAGGTTTTCTGGTGATCGCTGTCGTGACTCCATCGGCGGCGAACCC 218 Query 121 ATTCAGGAAGAGCGTAGTTCTCGGAGGGAAGTCAGGTGTTCCAAACATTCGGACCAACAG 180 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 219 ATTCAGGAAGAGCGTAGTTCTCGGAGGGAAGTCAGGCGTTCCAAACATTCGGACCAACAG 278 Query 181 GGAGATTCAAGAACTTGGAAGGTACTGCGTGGAGCAATTCAATCAACAAGAACAGACCGA 240 ||| |||||| ||||||||||||||||||||||||||||||||||||||| ||||| ||| Sbjct 279 GGAAATTCAACAACTTGGAAGGTACTGCGTGGAGCAATTCAATCAACAAGCACAGAACGA 338 Query 241 GCAAGGAAACATAGGATCCATTGCGAAAACGGACACAGCCATGTCGAATCCATTGGTGTT 300 |||||||||||||||||||||||||||||| ||||| || || |||||||||||| || Sbjct 339 GCAAGGAAACATAGGATCCATTGCGAAAACAGACACGGCAATTTCGAATCCATTGCAATT 398 Query 301 TAGCCGAGTTGTATCGGCTCAAAAACAGGTCGTCGCTGGGAC-CAAATACTATCTAAGGA 359 ||||||||| || || ||||| ||||||||||||||||| || ||||||||||||||||| Sbjct 399 TAGCCGAGTAGTGTCTGCTCAGAAACAGGTCGTCGCTGG-ACTCAAATACTATCTAAGGA 457 Query 360 TTGAAGTGACTCAACCCAATGGCTCGACCAGGATGTTTGACTCTGTTGTGGTTATTCAAC 419 ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 458 TTGAAGTCACTCAACCCAATGGCTCTACCAGGATGTTTGACTCTGTTGTGGTTATTCAAC 517 Query 420 CATGGCTCCATTCTAAGCAGTTGCTAGGTTTCACTCCTGTTGTCAGTCCTATCTACTAAC 479 ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| Sbjct 518 CATGGCTCCATTCTAAGCAGTTGCTCGGTTTCACTCCTGTTGTCAGTCCTGTCTACTAAC 577 Query 480 TTCATTTCTT---ATTCAGCCTTAAATTTCCATAATATGATCATGAAAAGACTAAAAGGT 536 || ||||||| |||| | ||||||||||||||||||||||| |||||||||||||||| Sbjct 578 TTTATTTCTTCTTATTC-GACTTAAATTTCCATAATATGATCAAGAAAAGACTAAAAGGT 636 Query 537 GTATGATACGAAGCTATTAAGAATGGGTTTAT-GTTG 572 ||||||||| ||||||||||||||||||| || |||| Sbjct 637 GTATGATACAAAGCTATTAAGAATGGGTTAATAGTTG 673 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 28784166231 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5