BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg482141
Length=649
Score E
Sequences producing significant alignments: (Bits) Value
AT2G32090.1 | Symbols: | Lactoylglutathione lyase / glyoxalase... 787 0.0
> AT2G32090.1 | Symbols: | Lactoylglutathione lyase / glyoxalase
I family protein | chr2:13644395-13645799 FORWARD LENGTH=704
Length=704
Score = 787 bits (426), Expect = 0.0
Identities = 599/676 (89%), Gaps = 37/676 (5%)
Strand=Plus/Plus
Query 1 TTTTTTGTCGACCAtttttttttCTGAGTTCTTCTTTCTTTTGATAAGCTTTGTCCTCCT 60
||||||||||||||||||| |||||||||| ||| ||| ||||| ||||||| |
Sbjct 39 TTTTTTGTCGACCATTTTTGTTTCTGAGTTGTTC-TTC--TTGATTAGCTTTG------T 89
Query 61 CCTCTTAGAACCAAACATGGCGAGTCTTGGCCATATAGCCAGAGAATCCTCCGACATCAA 120
|| ||| ||||||||||||||||||||||||||||||||||||||||| || |||||||
Sbjct 90 CCGCTTGGAACCAAACATGGCGAGTCTTGGCCATATAGCCAGAGAATCATCAGACATCAC 149
Query 121 ACGCCTTGCCGAGTTTTACAAAGAGGTGTTTGGGTTCGAGGAGATCGAAAGTCCTGATTT 180
|||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 150 ACGCCTCGCCCAGTTTTACAAAGAGGTGTTTGGGTTCGAGGAGATCGAAAGTCCTGATTT 209
Query 181 TGGAGACCTAAAGGTGATATGGCTAAACTTACCAGGTGCTTTTGCAATGCACATTATCCA 240
|||||||||| ||||| | |||||||||||||||||||||||||||||||| ||||||||
Sbjct 210 TGGAGACCTACAGGTGGTGTGGCTAAACTTACCAGGTGCTTTTGCAATGCATATTATCCA 269
Query 241 GAGAAACCCTTCAACCAACCTTCCAGAAGGTCCTTACAGTGCTACCTCAGCGGTT-CGTG 299
||||||||||||||| || |||||||||||||||||||||||||||||||||||| | |
Sbjct 270 GAGAAACCCTTCAACAAATCTTCCAGAAGGTCCTTACAGTGCTACCTCAGCGGTTAAG-G 328
Query 300 ATCCTAGCCATCTCCCAATGGGTCACCATATCTGCTTCTCCGTCCCAAATTTCGACTCTT 359
||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||
Sbjct 329 ATCCTAGCCATCTCCCAATGGGTCATCATATCTGTTTCTCTGTCCCAAATTTCGACTCTT 388
Query 360 TCCTTCATTCTCTCAAGGAAAAAAGGATAGAAACTTTTCAGAAGTCTCTTCCTGATGGAA 419
||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||
Sbjct 389 TCCTTCATTCTCTCAAGGAGAAAGGGATAGAAACTTTTCAGAAGTCTCTTCCTGATGGAA 448
Query 420 AAGTCAAGCAAGTTTTCTTCTTTGATCCAGATGGAAACGGATTAGAGGTAGCAAGTCGAT 479
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 449 AAGTCAAGCAAGTTTTCTTCTTTGATCCTGATGGAAACGGATTAGAGGTAGCAAGTCGAT 508
Query 480 CTTGAGCGT--A-CCTGAAATAAA-G--ATG--TGGT-A-A---T-AA-TCA--GT-TTG 521
| ||||| | | ||||||||| | || | | | | | || | | || |||
Sbjct 509 CATGAGCCTTGAACCTGAAATATGTGGTATCACTACTTATAGAATGAAATAAAAGTATTG 568
Query 522 T-TGGA-A--CA-T--GAT-AACTAAAGGCTATATGTCTAGGTTTGATGTTAACTTGTGA 573
| | | | || | | | || |||| |||||||||||||||||||||||||||||||
Sbjct 569 TATAAATAATCAGTTTGTTGAAATAAAATCTATATGTCTAGGTTTGATGTTAACTTGTGA 628
Query 574 TAACTTACGCTTCAAAGTTCGTGTCATGTGCTTTGAATGTTGGATGTATCGAATTTATGA 633
| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 629 CAGCTTACGCCTCAAAGTTCGTGTCATGTGCTTTGAATGTTGGATGTATCGAATTTATGA 688
Query 634 GCTTTTCCTTGTCTAG 649
||||||||||||||||
Sbjct 689 GCTTTTCCTTGTCTAG 704
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 31346107728
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5