BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg482164 Length=477 Score E Sequences producing significant alignments: (Bits) Value AT2G32360.1 | Symbols: | Ubiquitin-like superfamily protein | ... 649 0.0 > AT2G32360.1 | Symbols: | Ubiquitin-like superfamily protein | chr2:13737019-13737546 REVERSE LENGTH=528 Length=528 Score = 649 bits (351), Expect = 0.0 Identities = 440/481 (91%), Gaps = 14/481 (3%) Strand=Plus/Plus Query 1 ATGAAAGTGAGTGTGGAGATAATAACGGGGACGTTTATTGATGCGGACGTGAGTGAAGAT 60 ||||| ||||||||||||||||||||||| || ||||| ||| ||||||||||||||||| Sbjct 1 ATGAAGGTGAGTGTGGAGATAATAACGGGAACATTTATAGATACGGACGTGAGTGAAGAT 60 Query 61 ACGACGGTCAAAG-AACTGAAGGAGAAGATCGCGGCGGAGGTGAAATTACCGGTGACTCG 119 |||||||| ||| || |||||||||||||||||| |||||||||||| |||||||| || Sbjct 61 GCGACGGTC-AAGCAAATGAAGGAGAAGATCGCGGTGGAGGTGAAATTGCCGGTGACGCG 119 Query 120 TTTGATACTTGTCATCGGAGATGAAGAGACGAGAAGGA-TGGTGATGGAGGATGAAGATG 178 ||||||||||||||| ||||||||||||||||||| || ||||||||||||||||||||| Sbjct 120 TTTGATACTTGTCATTGGAGATGAAGAGACGAGAA-GATTGGTGATGGAGGATGAAGATG 178 Query 179 ACATGATGCTGAGAGATTTAGGAGTGGGAGAAGATTCTCATATGTATTTGTTCTTTAAGC 238 |||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 179 ACATGATGTTGAGAGATTTAGGAGTGGGAGAAGATTCTCATATCTATTTGTTCTTTAAGC 238 Query 239 ATCCTGATTTGGTTTCTGAGGAAGAG-GAATCTAAAGGAGGAGAAGAAGATGATGATGAT 297 ||||||||||||||||| |||||||| || |||||||||| | | || |||||||||| Sbjct 239 ATCCTGATTTGGTTTCTAAGGAAGAGAGA-TCTAAAGGAG-A-A-GA---TGATGATGAT 291 Query 298 CCTATGGAGGAGGTTTCGTCGGAAGCAGAGAGTCCAAGAGGAAACGAAGAAGAAGACGAA 357 ||||||||||||||||| ||||||||||||||| |||||||||||||||||||| |||| Sbjct 292 CCTATGGAGGAGGTTTCTTCGGAAGCAGAGAGTGGAAGAGGAAACGAAGAAGAAGTCGAA 351 Query 358 AAGCCAAAAATAGACGGGgaagag-aaggatcaagcgatgaaggatgaagaagaagatag 416 ||| ||||||||||||| |||||| ||| ||||||||||||| ||||||||||||||||| Sbjct 352 AAGGCAAAAATAGACGGTGAAGAGGAAG-ATCAAGCGATGAAAGATGAAGAAGAAGATAG 410 Query 417 cgatgagaaagttgaagaagatgaagaagcgaagcagaatgagaaggatggtgaagcAAA 476 |||| |||||| |||||||||||||||| |||| |||| |||||||||||||||||||| Sbjct 411 AGATGTGAAAGTAGAAGAAGATGAAGAAGAGAAGGAGAAGGAGAAGGATGGTGAAGCAAA 470 Query 477 G 477 | Sbjct 471 G 471 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 22705834444 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5