BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg482171
Length=1791
Score E
Sequences producing significant alignments: (Bits) Value
AT2G32440.1 | Symbols: KAO2, CYP88A4, ATKAO2 | ent-kaurenoic ac... 2772 0.0
AT1G05160.1 | Symbols: CYP88A3, ATKAO1, KAO1 | cytochrome P450,... 1096 0.0
> AT2G32440.1 | Symbols: KAO2, CYP88A4, ATKAO2 | ent-kaurenoic
acid hydroxylase 2 | chr2:13775570-13778002 FORWARD LENGTH=1787
Length=1787
Score = 2772 bits (1501), Expect = 0.0
Identities = 1701/1797 (95%), Gaps = 16/1797 (1%)
Strand=Plus/Plus
Query 1 CTATCTGCAGGGTTTGATATAACATCTAGAGGATACAAGAGGTGGTCAGTTGAAAAAGAT 60
|||| |||||||| ||||||||||||||||||||||||||||||||||| || |||||||
Sbjct 1 CTATATGCAGGGTATGATATAACATCTAGAGGATACAAGAGGTGGTCAGGTGCAAAAGAT 60
Query 61 TGA--AATTTTGATTGGGGAGTGTTTACGACTGAAGCTATGACGGAACCGGGTTTGATTC 118
||| |||| || || ||||||||||||||||||||||||||||| ||||||||||||
Sbjct 61 TGAGTTTTTTTTATAGGAGAGTGTTTACGACTGAAGCTATGACGGAAACGGGTTTGATTC 120
Query 119 TGATGTGGTTCCCTTTGATGGTTTTGGGATTGTTTGTTTTGAAATGGGTGTTAAAGAGTG 178
| ||||||||||||||||| | ||||||||||||||||||||||||||| | ||||| |
Sbjct 121 TCATGTGGTTCCCTTTGATAATATTGGGATTGTTTGTTTTGAAATGGGTGCTGAAGAGAG 180
Query 179 TGAATGTTTGGATTTATGAGTCCAAACTTGGTGAGAAAAAACACTATCTGCCACCAGGTG 238
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 181 TGAATGTTTGGATTTATGTGTCCAAACTTGGTGAGAAAAAACACTATCTGCCACCAGGTG 240
Query 239 ATTTGGGATGGCCAATCATAGGCAACATGTGGTCCTTTCTTAGAGCTTTCAAAACATCTG 298
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 241 ATTTGGGATGGCCAGTCATAGGCAACATGTGGTCCTTTCTTAGAGCTTTCAAAACATCTG 300
Query 299 ATCCTGAATCCTTCATCCAATCCTACATCACAAGGTATGGGCGTACTGGTATTTATAAAG 358
||||||||||||||||||||||||||||||| |||||||||||||| || ||||||||||
Sbjct 301 ATCCTGAATCCTTCATCCAATCCTACATCACCAGGTATGGGCGTACCGGGATTTATAAAG 360
Query 359 CACACATGTTTGGGTACCCATGTGTACTAGTAACAACACCAGAGACTTGTCGACGAGTTC 418
|||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||
Sbjct 361 CACACATGTTTGGGTACCCATGTGTACTAGTAACAACACCAGAGACTTGTAGGCGAGTTC 420
Query 419 TAACAGATGATGATGCCTTTCACATAGGTTGGCCAAAATCTACCATGAAACTCATTGGCA 478
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 421 TAACAGATGATGATGCCTTCCACATAGGTTGGCCAAAATCTACCATGAAACTCATTGGCA 480
Query 479 GGAAGTCCTTTGTCGGTATCTCCTTTGAAGAACACAAGCGGCTCAGGCGTTTGACTTCTG 538
||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 481 GGAAGTCCTTTGTTGGTATCTCCTTTGAAGAACACAAGAGGCTCAGGCGTTTGACTTCTG 540
Query 539 CTCCTGTCAATGGCCCTGAAGCTCTCTCTGTCTACATACAATTCATTGAAGAAACTGTTA 598
||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||
Sbjct 541 CTCCTGTCAATGGCCCTGAAGCTCTCTCTGTATACATACAGTTCATTGAAGAAACTGTTA 600
Query 599 TTACTGATCTAGAAAAATGGTCCAAAATGGGAGAAATCGAGTTCTTATCTCATTTGCGTA 658
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 601 ATACTGATCTAGAAAAATGGTCCAAAATGGGAGAAATCGAGTTCTTATCTCATTTGCGTA 660
Query 659 AGCTTACGTTTAAGGTCATTATGTACATATTTCTCAGCAGTGAGAGTGAGCATGTCATGG 718
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 661 AGCTTACGTTTAAGGTCATTATGTACATATTTCTCAGCAGTGAGAGTGAGCATGTCATGG 720
Query 719 ATGCATTGGAACGGGAATATACCAACCTTAACTATGGAGTTCGAGCAATGGGTATTAATC 778
|| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 721 ATTCATTGGAACGGGAGTATACCAACCTTAACTATGGAGTTCGAGCAATGGGTATTAATC 780
Query 779 TTCCTGGGTTTGCTTATCATAGAGCTTTGAAGGCAAGGAAAAAGCTTGTAGCCGCCTTTC 838
||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||
Sbjct 781 TTCCTGGGTTTGCTTATCATAGAGCTTTGAAGGCAAGGAAAAAACTTGTAGCTGCCTTTC 840
Query 839 AGTCCATAGTGACTAACCGAAGAAATCAAAGGAAGCAGAATATTTCATCCAATAGAAAAG 898
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 841 AGTCCATAGTGACTAACCGAAGAAATCAAAGGAAGCAGAATATTTCATCCAATAGAAAAG 900
Query 899 ACATGCTGGATAATCTAATAGATGTTAAAGATGAAAACGGAAGAGTTTTAGATGACGAGG 958
| |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||
Sbjct 901 ATATGCTGGATAATCTAATAGATGTTAAAGATGAAAACGGAAGAGTCTTAGATGATGAGG 960
Query 959 AAATTATTGACCTTTTGTTGATGTATCTTAATGCGGGTCATGAATCTTCTGGACACCTCA 1018
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 961 AAATTATTGACCTTTTGTTGATGTATCTTAATGCGGGTCATGAATCTTCTGGACACCTCA 1020
Query 1019 CTATGTGGGCTACCATTTTGATGCAAGAACACCCTGAA-ATTCTACAAAAGGCAAAGGAA 1077
||||||||||||||||||||||||||||||||||| | ||||| |||||||| ||||||
Sbjct 1021 CTATGTGGGCTACCATTTTGATGCAAGAACACCCT-ATGATTCTGCAAAAGGCTAAGGAA 1079
Query 1078 GAGCAAGAGAGGATCGTAAAAAACAGAGCGCCGGGACAGAAGTTGACGCTTAAAGAGACA 1137
|| |||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct 1080 GAACAAGAGAGGATCGTAAAAAAGAGAGCACCGGGACAGAAGTTGACGCTTAAAGAGACA 1139
Query 1138 CGTGAAATGGAGTATCTTTCTCAGGTTATTGATGAGACACTTCGAGTAATAACATTCTCT 1197
|||||||||| ||||||||||||||||||||||||||| ||||||||||| |||||||||
Sbjct 1140 CGTGAAATGGTGTATCTTTCTCAGGTTATTGATGAGACCCTTCGAGTAATTACATTCTCT 1199
Query 1198 CTTACGGCTTTCCGGGAAGCAAAGAGTGACGTCCAAATAGATGGCTATATCATTCCAAAA 1257
|| ||||| ||| |||||||||||||||| |||||||| ||||||||||| |||||||||
Sbjct 1200 CTGACGGCCTTCAGGGAAGCAAAGAGTGATGTCCAAATGGATGGCTATATAATTCCAAAA 1259
Query 1258 GGCTGGAAGGTTCTGACTTGGTTTAGGAACGTCCATTTGGACCCAGAGATCTACCCGGAT 1317
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct 1260 GGCTGGAAGGTTCTGACTTGGTTTAGGAACGTCCATTTGGACCCTGAAATCTACCCGGAT 1319
Query 1318 CCAAAGAAATTTGATCCTTCAAGATGGCAGGGATACACACCAAAAGCAGGCACATTCCTT 1377
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1320 CCAAAGAAATTTGATCCTTCAAGATGGGAGGGATACACACCAAAAGCAGGCACATTCCTT 1379
Query 1378 CCTTTTGGTTTAGGAAGCCATCTCTGCCCTGGAAACGATCTTGCAAAGCTCGAGATTTCC 1437
||||||||||| |||||||| || ||||| |||||||||||||| |||||||||||||||
Sbjct 1380 CCTTTTGGTTTGGGAAGCCACCTATGCCCGGGAAACGATCTTGCCAAGCTCGAGATTTCC 1439
Query 1438 ATTTTTCTTCATCATTTCCTCCTCAAATACCGGGTAGAAAGGAGCAATCCAGGGTGTCCG 1497
||||||||||||||||||||||||||||||||||| |||||||||||||| || ||||||
Sbjct 1440 ATTTTTCTTCATCATTTCCTCCTCAAATACCGGGTGGAAAGGAGCAATCCCGGATGTCCG 1499
Query 1498 GTGATGTTCTTGCCTCACAATCGACCCAAAGATAATTGCTTAGCAAGAATCACCAAAACG 1557
||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||
Sbjct 1500 GTGATGTTCTTGCCTCACAATCGACCCAAAGATAATTGCCTAGCAAGAATCACCAGAACG 1559
Query 1558 ACGCCGTAATCATCATCTTCAAACTAGTAGACCCCTTTACCAAATATATAAGCTTCTTTT 1617
| ||| ||||||||||||||||||||||||||||||| | |||||||||||||||| | |
Sbjct 1560 ATGCCATAATCATCATCTTCAAACTAGTAGACCCCTT-AGCAAATATATAAGCTTCGTCT 1618
Query 1618 CAGGTTTCCATTGTCTCC-TCTTCTCTTAGAACTCGATCCAAACTGGTCCGGTTTGTGAA 1676
|||||||||||||||| | ||||||||||||||| ||||||||| ||| |||||||||||
Sbjct 1619 CAGGTTTCCATTGTCTTCATCTTCTCTTAGAACTTGATCCAAACCGGTTCGGTTTGTGAA 1678
Query 1677 TTTGGTTTACTAGCAAATATATGTCACCATAGTTTGAAGGATTT-TCCAAAGTAATGTTC 1735
||||||||||||| | | ||| || |||||||||||||||| || |||||||||||
Sbjct 1679 TTTGGTTTACTAGGA--TGTAT--CA--ATAGTTTGAAGGATTTGTC-AAAGTAATGTTG 1731
Query 1736 AAACTTT-CTTCTGGTTTAGTTTCAAATTTGGTTATAAAAAAGCAAAATCGAATTTC 1791
||| ||| || ||||||||| |||||||||||||||||||||| |||||||||||||
Sbjct 1732 AAATTTTTCT-CTGGTTTAGCTTCAAATTTGGTTATAAAAAAGTAAAATCGAATTTC 1787
> AT1G05160.1 | Symbols: CYP88A3, ATKAO1, KAO1 | cytochrome P450,
family 88, subfamily A, polypeptide 3 | chr1:1487378-1490947
REVERSE LENGTH=2078
Length=2078
Score = 1096 bits (593), Expect = 0.0
Identities = 1184/1462 (81%), Gaps = 70/1462 (5%)
Strand=Plus/Plus
Query 124 TGGTTCCCTTTGATGGTTTTGGGATTG-TTTGTTTTGAAATGGGTGTTAAAG-AGTGTGA 181
||||| ||| ||||||| |||||| || |||| | |||| ||| || | | | || ||||
Sbjct 374 TGGTTTCCTCTGATGGTGTTGGGA-TGTTTTGGTCTGAATTGGTTGGTCAGGAAG-GTGA 431
Query 182 ATGTTTGGATTTATGAGTCCAAACTTGGTGAGAAAAAACACTATCTGCCACCAGGTGATT 241
|||| ||| | |||||||||| ||||| ||||| | ||||||||||||||||||||||
Sbjct 432 ATGTGTGGCTCTATGAGTCCAGCCTTGGGGAGAACAGGCACTATCTGCCACCAGGTGATT 491
Query 242 TGGGATGGCCAATCATAGGCAACATGTGGTCCTTTCTTAGAGCTTTCAAAACATCTGATC 301
|||| ||||| |||| |||||||||| ||| ||||| ||||||||||| || ||||| |
Sbjct 492 TGGGTTGGCCTTTCATTGGCAACATGTTGTCTTTTCTCAGAGCTTTCAAGACTTCTGACC 551
Query 302 CTGAATCCTTCA-TC-CAATCCTACATCACAAGGTATGGGCGTACTGGTATTTATAAAGC 359
|||| ||||||| || || | || |||| ||||||||| | || ||||| ||||||||
Sbjct 552 CTGACTCCTTCACTCGCACT-TTA-ATCAAAAGGTATGGACCTAAAGGTATATATAAAGC 609
Query 360 ACACATGTTTGGGTACCCATGTGTACTAGTAACAACACCAGAGACTTGTCGACGAGTTCT 419
||||||||| ||| ||||| || || ||||||||||| |||| ||||| || || || ||
Sbjct 610 ACACATGTTCGGGAACCCAAGTATAATAGTAACAACATCAGACACTTGCCGGCGTGTGCT 669
Query 420 AACAGATGATGATGCCTTTC-A-CATAGGTTGGCCAAAATCTACCATGAAACTCATTGGC 477
||||| ||||||| | ||| | | ||||||||||| |||||| ||| ||||||||||
Sbjct 670 GACAGACGATGATG-CGTTCAAGC-CAGGTTGGCCAACATCTACAATGGAACTCATTGGA 727
Query 478 AGGAAGTCCTTTGTCGGTATCTCCTTT-GAAGAACACAAGCGGCTCAGGCGTTTGACTTC 536
|||||||| || || ||||||| |||| || ||||||||||| ||||||||||||||| |
Sbjct 728 AGGAAGTCATTCGTTGGTATCT-CTTTCGAGGAACACAAGCGTCTCAGGCGTTTGACTGC 786
Query 537 TGCTCCTGTCAATGGCCCTGAAGCTCTCTCTGTC-TACATACAATTCATTGAAG-AAACT 594
|||||| |||||||||| |||||| |||||| | || |||| | |||||||| ||||
Sbjct 787 TGCTCCAGTCAATGGCCATGAAGCCCTCTCT-ACTTATATACCGTACATTGAAGAAAAC- 844
Query 595 GTTATTACTGATCTAGAAAAATGGTCCAAAATGGGAGAAATCGAGTTCTT-ATCTCATTT 653
|||||||||| ||| || || ||| ||||||||||||| |||||||||| | ||||| |
Sbjct 845 GTTATTACTGTTCTGGACAAGTGGACCAAAATGGGAGAGTTCGAGTTCTTGA-CTCATCT 903
Query 654 GCGTAAGCTTACGTTTAAGG-TCATTATGTACATATTTCTCAGCAGTGAGAGTGAGCATG 712
||||||||| || ||| ||| |||| |||||||| ||||||||| |||||||||| |||
Sbjct 904 GCGTAAGCTCACCTTT-AGGATCATCATGTACATCTTTCTCAGCTCTGAGAGTGAGAATG 962
Query 713 TCATGGATGCATTGGAACGGGAATATACCAAC-CTTAACTATGGAGTTCGAGCAATGGGT 771
| ||||||||||||||||| ||||||| || | ||||||||||| ||||||||||| ||
Sbjct 963 TAATGGATGCATTGGAACGAGAATATA-CAGCTCTTAACTATGGGGTTCGAGCAAT-GGC 1020
Query 772 A-TTAATCTTCCTGGGTTTGCTTATCATAGAGCTTTGAAGGCAAGGAAAA-AGCTTGTAG 829
| | ||| ||||||| ||||||||||||||||| | ||||| ||||||| | |||||||
Sbjct 1021 AGTCAATATTCCTGGATTTGCTTATCATAGAGCACTCAAGGCGAGGAAAACA-CTTGTAG 1079
Query 830 CCGCCTTTCAGTCCATAGTGACTAACCGAAGAAATCAAAGGAAGCAGAATATTTCATCCA 889
| ||||||||||||||||||||| | || |||||||||||||||||||| |||| ||| |
Sbjct 1080 CTGCCTTTCAGTCCATAGTGACTGAGCGCAGAAATCAAAGGAAGCAGAACATTTTATCAA 1139
Query 890 AT-AGAAAAGACATGCTGGATAATC-TAATAGATGTTAAAGATGAAAACGGAAGAGTTTT 947
|| || ||||| ||| | || |||| | || |||||||||||||| | |||| | |||
Sbjct 1140 ATAAG-AAAGATATGTTAGACAATCTTCTTA-ATGTTAAAGATGAAGATGGAAAAACTTT 1197
Query 948 AGATGACGAGGAAATTATTGACCTT-TTGTTGATGTATCTTAATGCGGGTCATGAATCTT 1006
|||||||| || ||||| || || || |||||||||||||||| ||||||||||| |
Sbjct 1198 GGATGACGAAGAGATTATCGATGTTCTT-CTGATGTATCTTAATGCCGGTCATGAATCCT 1256
Query 1007 CTGGACAC-CTCACTATGTGGGCTACCATTTTGATGCAAGAACACCCTGAAATTCTACAA 1065
|||| ||| | || ||||||||||||| |||| | |||||||||||||| |||||| |
Sbjct 1257 CTGGCCACAC-CATTATGTGGGCTACCGTTTTTCTACAAGAACACCCTGAGGTTCTAC-A 1314
Query 1066 AAG-GCAAAGGAAGAGCAAGAGAGGATCGTAAAAAACAGAGCGCCG--GGAC-AGAA-GT 1120
||| ||||||| || ||||| | |||| | |||| || || | | || | | || ||
Sbjct 1315 AAGAGCAAAGGCTGAACAAGAAATGATCCTGAAAAGTAG-GC-CTGAAGGTCAAAAAGGT 1372
Query 1121 -TGA-CGCTTAAAGAGACACGTG-AAATGGAGTATCTT-TCTCAGGTTATTGATGAGACA 1176
| | | || ||||| || || | ||||||| | |||| || |||||| | |||||||||
Sbjct 1373 CT-ATCTCTAAAAGAAACCCG-GAAAATGGAAT-TCTTATCGCAGGTTGTCGATGAGACA 1429
Query 1177 CTTCGAGTAATAACATTCTCTCTTACGGCTTTCCGGGAAGCAAAGAGTGACGTCCAAATA 1236
|||||||| ||||||||||| || || ||||| || || ||||||| |||||| ||||
Sbjct 1430 CTTCGAGTCATAACATTCTCACTCACTGCTTTTCGAGAGGCAAAGACTGACGTTGAAAT- 1488
Query 1237 GA-TGGCTATATCATTCCAAAAGGCTGGAAGGTTCTGACTTGGTTTAGGAACGTCCATTT 1295
|| ||||||| | || |||||||| ||||||||| |||| ||||||||| | ||||| |
Sbjct 1489 GAATGGCTATTTGATCCCAAAAGGTTGGAAGGTTTTGACATGGTTTAGGGATGTCCACAT 1548
Query 1296 GGACCCAGA-GATCTACCCGGATCCAAAGAAA-TTTGATCCTTCAAGATGGCAG---GGA 1350
||||| || | ||| || ||||||| |||| ||||||||| | |||||| | ||
Sbjct 1549 CGACCCTGAAG-TCTTTCCAGATCCAA-GAAAATTTGATCCTGCTAGATGGGATAATGGT 1606
Query 1351 TACACACCAAAAGCAGGCACATTCCTTCCTTTTGGTT-TAGGAAGCCATCTCTGCCCTGG 1409
| | ||||||||| || | ||||||||||||||| | ||||||||||| ||||| ||
Sbjct 1607 TTCGTACCAAAAGCTGGTGCGTTCCTTCCTTTTGGTGCT-GGAAGCCATCTATGCCCGGG 1665
Query 1410 AAACGATCTTGCAAAGCTCGAGATTTCCATTTTTCTTCATCATTTCCTCCTCAAATACCG 1469
||| ||||| || |||||||||||||| ||||||||||||||||||||||||||||| |
Sbjct 1666 AAATGATCTGGCTAAGCTCGAGATTTCAATTTTTCTTCATCATTTCCTCCTCAAATATCA 1725
Query 1470 GGTAGAAA-GGAGCAATCCAGGGTGTCCGGTGATGT-TCTTGCCTCACAATC-GACCCAA 1526
||| |||| ||||||| || | ||||| ||||||| ||| |||||| | | |||| ||
Sbjct 1726 GGT-GAAACGGAGCAACCCCGAATGTCCAGTGATGTATCT-GCCTCATAC-CAGACC-AA 1781
Query 1527 A-GATAATTGCTTAGCAAGAAT 1547
||||||||||| ||||||||
Sbjct 1782 CTGATAATTGCTTGGCAAGAAT 1803
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 88603961925
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5