BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg482195
Length=1159
Score E
Sequences producing significant alignments: (Bits) Value
AT2G32670.1 | Symbols: ATVAMP725, VAMP725 | vesicle-associated ... 1216 0.0
AT1G04760.1 | Symbols: ATVAMP726, VAMP726 | vesicle-associated ... 765 0.0
AT2G33120.2 | Symbols: SAR1, VAMP722, ATVAMP722 | synaptobrevin... 636 0.0
AT2G33110.1 | Symbols: ATVAMP723, VAMP723 | vesicle-associated ... 508 4e-143
AT3G24890.2 | Symbols: VAMP728 | vesicle-associated membrane pr... 167 2e-40
AT3G24929.1 | Symbols: | unknown protein; FUNCTIONS IN: molecu... 54.7 2e-06
> AT2G32670.1 | Symbols: ATVAMP725, VAMP725 | vesicle-associated
membrane protein 725 | chr2:13857877-13859774 FORWARD LENGTH=1350
Length=1350
Score = 1216 bits (658), Expect = 0.0
Identities = 749/793 (94%), Gaps = 5/793 (1%)
Strand=Plus/Plus
Query 168 CTTCTTCGGGTCACATCAGAAACAATGGGACAGCAAAATTTGATCTACAGCTTCGTCGCT 227
|||||||||||||| || |||||||||||| |||||||||||||||||||||||||||
Sbjct 239 CTTCTTCGGGTCAC--GAG-AACAATGGGACAACAAAATTTGATCTACAGCTTCGTCGCT 295
Query 228 CGTGGTACGGTGATTCTCGCCGAGTATACAGAATTCAAAGGGAATTTCACTTCTGTCGCT 287
||||||||||||||||||| ||||||||||||||||||||| ||||||||| | ||||||
Sbjct 296 CGTGGTACGGTGATTCTCGTCGAGTATACAGAATTCAAAGGAAATTTCACTGCCGTCGCT 355
Query 288 GCTCAGTGTCTCCAGAAA-CTTCCTTCTTCGAATAACAAGTTTACATACAACTGCGATGG 346
|| ||||||||||| ||| |||||||||||||||||||||||||||||||| ||||| ||
Sbjct 356 GCACAGTGTCTCCA-AAAGCTTCCTTCTTCGAATAACAAGTTTACATACAATTGCGACGG 414
Query 347 TCATACGTTTAATTACCTCGTCGAAAATGGCTTTACTTATTGTGTTGTTGCTGTTGAATC 406
|| ||||| |||||||||||||| |||||||| || |||||||||||||||||||||||
Sbjct 415 ACACACGTTCAATTACCTCGTCGAGAATGGCTTCACGTATTGTGTTGTTGCTGTTGAATC 474
Query 407 TGTTGGGAGGCAGATTCCAATGGCTTTCTTGGAGAGAGTTAAGGAGGATTTCAACAAGAG 466
|||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct 475 TGTTGGGAGGCAGATTCCTATGGCTTTCTTGGAGAGAGTTAAGGAAGATTTCAACAAGAG 534
Query 467 ATATGGTGGTGGAAAGGCTACCACTGCTCAAGCCAACAGCTTGAACAGAGAGTTTGGGTC 526
|||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 535 ATATGGTGGTGGTAAGGCTACCACTGCTCAAGCCAACAGCTTAAACAGAGAGTTTGGGTC 594
Query 527 GAAATTGAAGGAGCACATGCAGTACTGTGTGGATCACCCTGATGAGATTAGCAAACTTGC 586
|||| ||||||||||||||||||||||||||||||| ||||| |||||||||||||||||
Sbjct 595 GAAACTGAAGGAGCACATGCAGTACTGTGTGGATCATCCTGACGAGATTAGCAAACTTGC 654
Query 587 CAAAGTTAAGGCTCAGGTGACTGAGGTGAAGGGTGTTATGATGGAGAACATTGAGAAGGT 646
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 655 CAAAGTTAAGGCTCAGGTTACTGAGGTGAAGGGTGTTATGATGGAGAACATTGAGAAGGT 714
Query 647 CCTTGACCGTGGTGAGAAAATTGAGCTTCTAGTTGATAAAACTGAGAACCTTCGTTCACA 706
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 715 CCTTGACCGTGGTGAGAAAATTGAGCTTCTAGTTGACAAAACTGAGAACCTTCGTTCACA 774
Query 707 GGCACAAGATTTCAGAGCGCAAGGAACGAAAATGAGAAGAAAGATGTGGTTTGACAACAT 766
|||||||||||||||| | |||||||| ||||| |||||||||||||||||||| |||||
Sbjct 775 GGCACAAGATTTCAGAACACAAGGAACAAAAATAAGAAGAAAGATGTGGTTTGAAAACAT 834
Query 767 GAAGATTAAACTCATAGTCCTCGGTATCATCATTACCTTGATTCTCATCATCATCCTCTC 826
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 835 GAAGATTAAGCTCATAGTCCTCGGTATCATCATTACCTTGATTCTCATCATCATCCTCTC 894
Query 827 GGTTTGCGGGGGATACAAGTGTACCTAAAACTTGAAAGAATCAGAAGAATACGTTGCGAG 886
||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 895 TGTTTGCGGGGGATTCAAGTGTACCTAAAACTTGAAAGAATAAGAAGAATACGTTGCGAG 954
Query 887 ATTACCAGCCCCATATTGCTCTACTAAGCTGACTGGAACTTCGCCTGGTATATGCCATTC 946
|||||||||||||||||||||||||||||| | ||||||||| || |||||||||| |||
Sbjct 955 ATTACCAGCCCCATATTGCTCTACTAAGCTCATTGGAACTTCTCCCGGTATATGCCCTTC 1014
Query 947 TTTTTCTTTCTGT 959
|||||||| ||||
Sbjct 1015 TTTTTCTTCCTGT 1027
Score = 204 bits (110), Expect = 2e-51
Identities = 155/175 (89%), Gaps = 9/175 (5%)
Strand=Plus/Plus
Query 988 CTGAAATAGATATAAGC-CCTTGGGGTTTGCTTATATATAGATTAGGTCTTTGTG--CTC 1044
||||||||||| ||||| | ||||||||||||||||| | ||||||||||| || |||
Sbjct 1130 CTGAAATAGATGTAAGCTGC-TGGGGTTTGCTTATATAGAAATTAGGTCTTTCTGCTCTC 1188
Query 1045 ATGGTGATGATATGAGtttttttttGTAATCTAAAATCTAATGTTGAGTTTTTGCTGTTT 1104
||||||||||||| | |||| ||||||||||||||||||||||||||||||||||||
Sbjct 1189 ATGGTGATGATAT--G---TTTTCTGTAATCTAAAATCTAATGTTGAGTTTTTGCTGTTT 1243
Query 1105 CCTTCAGTCTCTTTACATTTTATTTTTCCCTCTTGTTGATGCTAACCAAATTAAT 1159
||||| ||||||||| |||||||||| ||||||||||||||||||||||| |||
Sbjct 1244 TCTTCAATCTCTTTACTTTTTATTTTTTCCTCTTGTTGATGCTAACCAAATGAAT 1298
Score = 158 bits (85), Expect = 1e-37
Identities = 143/168 (85%), Gaps = 15/168 (9%)
Strand=Plus/Plus
Query 1 AGAATTAAATAACGCAATTAAATGATGaaaaaaaaa--atga-a-aaa--aaaaaaaTGA 54
||||||||||||||||||||| | ||||||||||| ||| | ||| | |||||||
Sbjct 9 AGAATTAAATAACGCAATTAATTTTTGAAAAAAAAACGTTGATAGAAAGGAGAAAAATG- 67
Query 55 TAATCGCAGCGAGCGTCGTCCCTATATCTCTCTCTCCCTTTGAATTTTC-CCTTGTATTT 113
|| | || ||||||||||||||||||||| |||||||| || |||| ||||||||||
Sbjct 68 -GAT--C-GC-AGCGTCGTCCCTATATCTCTCGCTCCCTTTCAA-TTTCTCCTTGTATTT 121
Query 114 TGGATCTTTCTTACTTCCGTACACCCAAAGCCAAACAAACaa-aaaaa 160
|||||||||||||||||||||||| |||| |||||||||||| |||||
Sbjct 122 TGGATCTTTCTTACTTCCGTACACACAAACCCAAACAAACAACAAAAA 169
> AT1G04760.1 | Symbols: ATVAMP726, VAMP726 | vesicle-associated
membrane protein 726 | chr1:1334760-1336070 FORWARD LENGTH=663
Length=663
Score = 765 bits (414), Expect = 0.0
Identities = 586/669 (88%), Gaps = 12/669 (2%)
Strand=Plus/Plus
Query 192 ATGGGACAGCAAAATTTGATCTACAGCTTCGTCGCTCGTGGTACGGTGATTCTCGCCGAG 251
|||||||| ||| ||||||||||||||||||||||| ||||||||||| |||||||||
Sbjct 1 ATGGGACAACAATCGTTGATCTACAGCTTCGTCGCTCGCGGTACGGTGATCCTCGCCGAG 60
Query 252 TATACAGAATTCAAAGGG-AATTTCACTTCTGTCGCTGCTCAGTGTCTCCAGAAACTTCC 310
||||| || ||| ||||| |||||||| || ||||| |||||||||||||||||||||||
Sbjct 61 TATACCGAGTTC-AAGGGCAATTTCACCTCCGTCGCCGCTCAGTGTCTCCAGAAACTTCC 119
Query 311 TTCTTCGAATAACAAGTTTACATACAACTGCGATGGTCATACGTTT-AATTACCTCGTC- 368
|| ||||| ||||| ||||| ||||| ||||| ||||| || ||| ||||| |||| |
Sbjct 120 GTCCTCGAACAACAAATTTACCTACAATTGCGACGGTCACAC-TTTCAATTATCTCG-CT 177
Query 369 GAAAATGGCTTTACTTATTGTGTTGTTGCTGTTGAATCTGTTGGGAGGCAGATTCCAATG 428
|| |||||||| || ||||||||||||| | ||||||||| |||||||||||| ||||||
Sbjct 178 GATAATGGCTTCACCTATTGTGTTGTTGTTATTGAATCTGCTGGGAGGCAGATACCAATG 237
Query 429 GCTTTCTTGGAGAGAGTTAAGGAGGATTTCAACAAGAGATATGGTGGTGGAAAGGCTACC 488
||||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||| ||
Sbjct 238 GCTTTCTTGGAGAGAGTCAAGGAGGATTTCAACAAGAGATACGGTGGTGGAAAAGCTTCC 297
Query 489 ACTGCTCAAGCCAACAGCTTGAACAGAGAGTTTGGGTCGAAATTGAAGGAGCACATGCAG 548
|||||| |||||||||||||||||| ||| || ||||| |||||||||||||||||||||
Sbjct 298 ACTGCTAAAGCCAACAGCTTGAACAAAGAATTCGGGTCTAAATTGAAGGAGCACATGCAG 357
Query 549 TACTGTGTGGATCACCCTGATGAGATTAGCAAACTTGCCAAAGTTAAGGCTCAGGTGACT 608
||||||| |||||| ||||| ||||||||||||||| |||||||||||||||||||||||
Sbjct 358 TACTGTGCGGATCATCCTGAGGAGATTAGCAAACTTTCCAAAGTTAAGGCTCAGGTGACT 417
Query 609 GAGGTGAAGGGTGTTATGATGGAGAACATTGAGAAGGTCCTTGACCGTGGTGAGAAAATT 668
|| ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct 418 GAAGTGAAGGGTGTTATGATGGAGAATATTGAGAAGGTCCTTGACCGTGGAGAGAAAATC 477
Query 669 GAGCT-TCTAGTTGATAAAACTGAGAACCTTCGTTCACAGGCACAAGATTTCAGAGCGCA 727
||||| | |||| || ||||||||||||||||| ||||||||||||||||| ||| | ||
Sbjct 478 GAGCTAT-TAGTAGACAAAACTGAGAACCTTCGCTCACAGGCACAAGATTTTAGAACACA 536
Query 728 AGGAACGAAA-ATGAGAAGAAAGATGTGGTTTGACAACATGAAGATTAAA-CTCATAGTC 785
|||||| ||| |||| ||||||| ||||||| || ||||||||||| ||| |||||||||
Sbjct 537 AGGAAC-AAAGATGAAAAGAAAGTTGTGGTTCGAAAACATGAAGAT-AAAGCTCATAGTC 594
Query 786 CTCGGTATCATCATTACCTTGATTCTCATCATCATCCTCTCGGTTTGCGGGGGATACAAG 845
| || ||||| | | ||||||||||||||||| | ||||||||| || | ||||
Sbjct 595 TTTGGCATCATTGTCGCTTTGATTCTCATCATCATTTTGTCGGTTTGCCATGGCTTCAAG 654
Query 846 TGTACCTAA 854
||||| |||
Sbjct 655 TGTACTTAA 663
> AT2G33120.2 | Symbols: SAR1, VAMP722, ATVAMP722 | synaptobrevin-related
protein 1 | chr2:14043459-14045543 REVERSE LENGTH=1222
Length=1222
Score = 636 bits (344), Expect = 0.0
Identities = 563/665 (85%), Gaps = 30/665 (5%)
Strand=Plus/Plus
Query 207 TTGATCTACAGCTTCGTCGCTCGTGGTACGGTGATTCTCGCCGAGTAT-ACAGAATTCAA 265
||||||||||| ||||||||||||||||| || || |||| |||| | ||||| |||||
Sbjct 222 TTGATCTACAGTTTCGTCGCTCGTGGTACCGTTATCCTCGTTGAGT-TCACAGATTTCAA 280
Query 266 AGGGAATTTCACTTCTGTCGCTGCTCAGTGTCTCCAGAAACTTCCTTCTTCGAATAACAA 325
||| |||||||| || ||||||||||||| || ||||| ||||||||||| || |||||
Sbjct 281 AGGCAATTTCACATCAATCGCTGCTCAGTGCCTTCAGAAGCTTCCTTCTTCTAACAACAA 340
Query 326 GTTTACATACAACTGCGATGGTCATACGTTTAATTACCTCGTCG--AA---A---A-TG- 375
|||||| ||||||||||||||||| ||||| ||||||||||||| || | | ||
Sbjct 341 GTTTACCTACAACTGCGATGGTCACACGTTCAATTACCTCGTCGAAAATGGATTCAGTGA 400
Query 376 G-C------TT--T--A-CT--TATTGTGTTGTTGCTGTTGAATCTGTTGGGAGGCAGAT 421
| | || | | || |||||||||||||| ||||| |||| ||||||||||||
Sbjct 401 GTCAAAATATTGCTCGATCTCCTATTGTGTTGTTGCAGTTGATTCTGCTGGGAGGCAGAT 460
Query 422 TCCAATGGCTTTCTTGGAGA-GAGTTAAGGAGGATTTCAACAAGAGATATGGTGGTGGAA 480
||| |||||||||||||| | |||||||||||||||||||||||||||||||||||||||
Sbjct 461 TCCTATGGCTTTCTTGGA-ACGAGTTAAGGAGGATTTCAACAAGAGATATGGTGGTGGAA 519
Query 481 AGGCTACCACTGCTCAAGCCAACAGCTTGAACAGAGAGTTTGGGTCGAAATTGAAGGAGC 540
||||| | ||||||||||| ||||||||||| | ||| |||||||||||| |||| ||||
Sbjct 520 AGGCTGCAACTGCTCAAGCAAACAGCTTGAATAAAGAATTTGGGTCGAAACTGAAAGAGC 579
Query 541 ACATGCAGTACTGTGTGGATCACCCTGATGAGATTAGCAAACTTGCCAAAGTTAAGGCTC 600
| |||||||| || ||||||| ||||||||||||||||| ||||| || ||||| ||||
Sbjct 580 ATATGCAGTATTGCATGGATCATCCTGATGAGATTAGCAAGCTTGCTAAGGTTAAAGCTC 639
Query 601 AGGTGACTGAGGTGAAGGGTGTTATGATGGAGAACATTGAGAAGGTCCTTGACCGTGGTG 660
| ||| |||| || || |||||||||||||| |||||||||||||| |||||||||||||
Sbjct 640 AAGTGTCTGAAGTTAAAGGTGTTATGATGGAAAACATTGAGAAGGTTCTTGACCGTGGTG 699
Query 661 AGAAAATTGAGCTTCTAGTTGATAAAACTGAGAACCTTCGTTCACAGGCACAAGATTTCA 720
|||| ||||||||| | ||||| ||||| || |||||||| |||||||| |||||||| |
Sbjct 700 AGAAGATTGAGCTTTTGGTTGACAAAACAGAAAACCTTCGCTCACAGGCGCAAGATTTTA 759
Query 721 GAGCGCAAGGAACGAAAATGAGAAGAAAGATGTGGTTTGACAACATGAAGATTAAA-CTC 779
|| | |||||||| ||||||||||||||||||||||| | ||||||||||| ||| |||
Sbjct 760 GAACACAAGGAACTCAAATGAGAAGAAAGATGTGGTTTCAGAACATGAAGAT-AAAGCTC 818
Query 780 ATAGTCCTCGGTATCATCATTACCTTGATTCTCATCATCATCCTCTCGGTTTGCGGGGGA 839
|| ||||| | || |||||| ||||||||||||||||||||||||| |||| ||||||
Sbjct 819 ATTGTCCTTGCAATTATCATTGCCTTGATTCTCATCATCATCCTCTCAATTTGTGGGGGA 878
Query 840 TACAA 844
| |||
Sbjct 879 TTCAA 883
> AT2G33110.1 | Symbols: ATVAMP723, VAMP723 | vesicle-associated
membrane protein 723 | chr2:14041038-14043358 REVERSE LENGTH=1379
Length=1379
Score = 508 bits (275), Expect = 4e-143
Identities = 525/644 (82%), Gaps = 24/644 (4%)
Strand=Plus/Plus
Query 207 TTGATCTACAGCTTCGTCGCTCGTGGTACGGTGATTCTCGCCGAGTAT-ACAGAATTCAA 265
||| ||||||| ||| ||||||| || || || || |||| ||||| | ||||| |||||
Sbjct 482 TTGTTCTACAGTTTCATCGCTCGCGGCACCGTAATCCTCGTCGAGT-TCACAGATTTCAA 540
Query 266 AGGGAATTTCACTTCTGTCGCTGCTCAGTGTCTCCAGAAACTTCCTTCTTCGAATAACAA 325
||| |||||||| |||||||||||||||| || |||| |||||||| ||||| |||||
Sbjct 541 AGGCAATTTCACATCTGTCGCTGCTCAGTACCTTGAGAATCTTCCTTCCTCGAACAACAA 600
Query 326 GTTTACATACAACTGCGATGGTCATACGTTTAATTACCTCGTCGAAAATGGCTTTACTTA 385
|||||| ||||||||||||||||||||||| || |||||||||||||||| || || ||
Sbjct 601 GTTTACCTACAACTGCGATGGTCATACGTTCAACGACCTCGTCGAAAATGGATTCACCTA 660
Query 386 TTGTGTTGTTGCTGTTGAATCTGTTGGGAGGCAGATTCCAATGGCTTTCTTGGAGA-GAG 444
|||||||||||| ||||| |||| ||||||| ||||||| |||||||||||||| | | |
Sbjct 661 TTGTGTTGTTGCAGTTGATTCTGCTGGGAGGGAGATTCCTATGGCTTTCTTGGA-ACGCG 719
Query 445 TTAAGGAGGATTTCAACAAGAGATATGGTGGTGGAAAGGCTACCACTGCTCAAGCCAACA 504
| ||||||||||| | |||||||||||||||| ||||||| | |||| |||||| || |
Sbjct 720 TGAAGGAGGATTTTTATAAGAGATATGGTGGTGAAAAGGCTGCAACTGATCAAGCAAATA 779
Query 505 GCTTGAACAGAGAGTTTGGGTCGAAAT-TGAAGGAGCACATGCAGTACTGTGTGGATCAC 563
||||||| | ||| ||||||||| ||| |||| |||||||||||||| || |||||||
Sbjct 780 GCTTGAATAAAGAATTTGGGTCG-AATCTGAAAGAGCACATGCAGTATTGCATGGATCAT 838
Query 564 CCTGATGAGATTAGCAAACTTGCCAAAGTTAAGGCTCAGGTGACTGAGGTGAAGGGTGTT 623
||||||||||||||||| ||||| |||| ||| ||||| ||| |||| || || || ||
Sbjct 839 CCTGATGAGATTAGCAACCTTGCTAAAGCTAAAGCTCAAGTGTCTGAAGTTAAAAGT-TT 897
Query 624 -ATGATGGAGAACATTGAGAAGGTCCTTGACCGTGGTGAGAAAAT-TGAGCTTCTAGTTG 681
|||||||| |||||||||||||| |||| |||||||| | | || |||| | || | |
Sbjct 898 AATGATGGAAAACATTGAGAAGGTTCTTGCCCGTGGTGTG-ATATGTGAGATGCT-G--G 953
Query 682 ATAAAACTGAGAACCTTCGTTCACAGGCACAAGATTTC-AGAGCGCAAGGAACGAAAATG 740
| | | || | | |||||| | |||| |||| | | || |||| |||||
Sbjct 954 GT--AGTTCAG-A-----G-TCACAGCCGCAAGCTTTCTATA-TAAAAAGAACTCAAATG 1003
Query 741 AGAAGAAAGATGTGGTTTGACAACATGAAGATTAAACTCATAGTCCTCGGTATCATCATT 800
| ||| |||| ||||||| | ||||||||||| |||||||| ||||| | || ||||||
Sbjct 1004 AAAAGGAAGAAGTGGTTTCAGAACATGAAGATAAAACTCATTGTCCTTGCAATTATCATT 1063
Query 801 ACCTTGATTCTCATCATCATCCTCTCGGTTTGCGGGGGATACAA 844
||||||||||||||||||||||||||||||| ||||||| |||
Sbjct 1064 GCCTTGATTCTCATCATCATCCTCTCGGTTTGTGGGGGATTCAA 1107
> AT3G24890.2 | Symbols: VAMP728 | vesicle-associated membrane
protein 728 | chr3:9097514-9098945 FORWARD LENGTH=663
Length=663
Score = 167 bits (90), Expect = 2e-40
Identities = 313/410 (76%), Gaps = 57/410 (14%)
Strand=Plus/Plus
Query 415 GGCAGATTCCAATGGCTTTCTTGGAGAGAG-TTAAGGAGGATTTCAACAAGAGATATGGT 473
|||||||||||||||| ||||||||| ||| |||| ||||||||||||||||||||||||
Sbjct 46 GGCAGATTCCAATGGCATTCTTGGAGCGAGTTTAA-GAGGATTTCAACAAGAGATATGGT 104
Query 474 GGTGG--A--AA-GGCTACCACTGCTCAAGCCAACAGCTTGAACAGAGAGTTTGGGTCGA 528
||||| | || |||||| ||| || || ||||||||||||||| | | | ||
Sbjct 105 GGTGGATAGGAATGGCTACAACTACTTAACCCAACAGCTTGAACA-A-A----GAGT--- 155
Query 529 AATTGAAGGAGCACATGCAGTACTGTGTGGATCA-CCCTGATGAGATTAGCAAACTTGCC 587
|| || ||||| | ||| ||| ||| || ||||||||||||||||||
Sbjct 156 --TT-----------TG--GTACT-TTTGGCTCATCCC-GAGGAGATTAGCAAACTTGCC 198
Query 588 AAAGTTAAGGCTC-AGGTGACTGAGGTGAAGGGTGTTATGATGGAGAACATTGAGAAGG- 645
|| |||||||||| | ||||| | |||| ||||||||||||||||||||||||||||
Sbjct 199 AAGGTTAAGGCTCTA-GTGACCAAAATGAAAGGTGTTATGATGGAGAACATTGAGAAGGC 257
Query 646 TCCTTGACCGTGGTGAGAAAATTGAGCTTCTAGTTGA--TA-----AAACTG-AG-AAC- 695
|| ||||||| ||||||||||| | ||||||| || | ||| | || |||
Sbjct 258 TC-TTGACCGCAGTGAGAAAATTAAAATTCTAGTGGACCTTCGTTCAAAGTATAGTAACT 316
Query 696 --C-TT--CGTTCACA-GG-CAC-AAGATTTCAGAGCGCAAGGAACGAAAATGAGAAGAA 747
| || | ||| | || || ||||| ||| | ||| |||||||||||| | |||||
Sbjct 317 TACCTTTTCCCTCATATGGTCAAGAAGATATCATAACGCCAGGAACGAAAATTACAAGAA 376
Query 748 AGATGTGGTTTGACAACATGAAGATTAAACTCATAGTCCTCGGTATCATC 797
||||||||||| | ||||||||| |||| ||||||||||| |||| ||||
Sbjct 377 AGATGTGGTTTCAGAACATGAAGTTTAAGCTCATAGTCCTTGGTA-CATC 425
> AT3G24929.1 | Symbols: | unknown protein; FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown;
LOCATED IN: cellular_component unknown; Has 1 Blast hits
to 1 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa
- 0; Fungi - 0; Plants - 1; Viruses - 0; Other Eukaryotes
- 0 (source: NCBI BLink). | chr3:9104495-9105648 FORWARD LENGTH=534
Length=534
Score = 54.7 bits (29), Expect = 2e-06
Identities = 29/29 (100%), Gaps = 0/29 (0%)
Strand=Plus/Plus
Query 455 TTTCAACAAGAGATATGGTGGTGGAAAGG 483
|||||||||||||||||||||||||||||
Sbjct 69 TTTCAACAAGAGATATGGTGGTGGAAAGG 97
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 56877217485
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5