BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg482224 Length=1716 Score E Sequences producing significant alignments: (Bits) Value AT2G32830.1 | Symbols: PHT5, PHT1;5 | phosphate transporter 1;5... 2601 0.0 AT3G54700.1 | Symbols: PHT1;7 | phosphate transporter 1;7 | chr... 610 1e-173 > AT2G32830.1 | Symbols: PHT5, PHT1;5 | phosphate transporter 1;5 | chr2:13927699-13929713 REVERSE LENGTH=1740 Length=1740 Score = 2601 bits (1408), Expect = 0.0 Identities = 1619/1721 (94%), Gaps = 13/1721 (1%) Strand=Plus/Plus Query 1 TTCTCTCAGGTGAGTAAACAACAGaaaaaaaaaaTGGCGAGGAAAGGGAAAGAAGTGTTA 60 ||||||||||||| | |||||||| | ||||| ||||||| ||||| ||||||||||| Sbjct 25 TTCTCTCAGGTGACTGAACAACAG-AGAAAAACATGGCGAAAAAAGGAAAAGAAGTGTTG 83 Query 61 AACGCTTTGGACGCGGCCAAAACGCAGATGTACTATTTCACAGCGATTGTAATCGCGGGT 120 |||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| Sbjct 84 AACGCTTTGGACGCAGCCAAAACGCAGATGTACCATTTCACAGCGATTGTAATCGCGGGT 143 Query 121 ATGGGTTTTTTCACTGATGCTTACGATCT-TTTCAGCATCTCTCTCGTCACCAAGCTCCT 179 ||||||||||||||||||||||||||||| ||| |||||||| |||||||| |||||||| Sbjct 144 ATGGGTTTTTTCACTGATGCTTACGATCTATTT-AGCATCTCCCTCGTCACGAAGCTCCT 202 Query 180 CGGCCGCATATACTACCACGTTGATGGCTCCAAGAAGCCTGGAACGCTCCCCCCAAATGT 239 |||||||||||||||||||||||| ||||||||||||||||||||||||| || ||||| Sbjct 203 AGGCCGCATATACTACCACGTTGATAGCTCCAAGAAGCCTGGAACGCTCCCTCCTAATGT 262 Query 240 TGCTGCCGCTGTTAATGGTGTGGCTTTCTGCGGGACCCTCGCTGGCCAGCTCTTCTTCGG 299 |||||||||||||||||||||||| |||||||| ||| | || ||||||||||||||||| Sbjct 263 TGCTGCCGCTGTTAATGGTGTGGCCTTCTGCGGTACCTTAGCAGGCCAGCTCTTCTTCGG 322 Query 300 TTGGCTCGGTGACAAGCTCGGCCGCAAGAAAGTTTACGGTATTACCTTGATGGTCATGGT 359 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 323 TTGGCTCGGTGACAAGCTCGGCCGCAAGAAAGTTTACGGTATTACCTTGATGCTCATGGT 382 Query 360 ACTATGTTCACTCGGGTCTGGTCTATCATTCGGTCACTCAGCTAACGGAGTAATGGCCAC 419 ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 383 ACTATGTTCTCTCGGGTCTGGTCTATCATTTGGTCACTCAGCTAACGGAGTAATGGCCAC 442 Query 420 ACTTTGTTTCTTCCGGTTCTGGCTTGGTTTCGGCATAGGCGGCGACTACCCTCTCTCCGC 479 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || Sbjct 443 ACTTTGTTTCTTCCGGTTCTGGCTCGGTTTCGGCATAGGCGGCGACTACCCTCTCTCAGC 502 Query 480 CACTATCATGTCAGAATACGCCAACAAGAAGACACGTGGCGCGTTCATAGCAGCCGTCTT 539 ||| |||||||| ||||||||||||||||| ||||||||||| ||||||||||||||||| Sbjct 503 CACCATCATGTCGGAATACGCCAACAAGAAAACACGTGGCGCCTTCATAGCAGCCGTCTT 562 Query 540 TGCTATGCAAGGCTTCGGAATCTTAGCCGGAGGAATCGTGTCTCTCATCGTCTCGAGTGC 599 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 563 CGCTATGCAAGGCTTCGGAATCTTAGCCGGAGGAATCGTGTCTCTCATCGTCTCGAGTAC 622 Query 600 ATTCGACCATGCTTTCGACGCACCCACCTACGAAGTTGATCCGGTTGGGTCCACTGTTCC 659 ||| |||||||| ||| | || ||||||||||| |||||||| ||||| ||||||||||| Sbjct 623 ATTTGACCATGCCTTCAAAGCGCCCACCTACGAGGTTGATCCTGTTGGCTCCACTGTTCC 682 Query 660 TCAGGCGGATTACGTGTGGCGGATTGTGCTCATGTTTGGAGCTATTCCGGCGTTACTTAC 719 ||| ||||||||||||||||||||||||||||||||||||||||| || || |||||||| Sbjct 683 TCAAGCGGATTACGTGTGGCGGATTGTGCTCATGTTTGGAGCTATCCCAGCTTTACTTAC 742 Query 720 TTATTATTGGCGGATGAAGATGCCGGAAACTGCTCGGTATACCGCTCTTGTTGCCCGGAA 779 |||||||||||||||||| |||||||||||||||||||||||||||||||| || ||||| Sbjct 743 TTATTATTGGCGGATGAAAATGCCGGAAACTGCTCGGTATACCGCTCTTGTAGCTCGGAA 802 Query 780 TACCAAACAAGCCGCCTCCGATATGTCTAAGGTGCTTCAAGTGGATCTAATTGCAGAAGA 839 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 803 TACCAAACAAGCCGCCTCCGATATGTCTAAGGTGCTTCAAGTGGATCTAATTGCAGAAGA 862 Query 840 AGAAGCACAACCAAATCAGTCATCTTCATCAAACCCTAATTCCTCCTTCGGCTTATTCTC 899 |||||||||| ||||| ||| ||||||||||||||||| | ||||||| |||||| | Sbjct 863 AGAAGCACAATCAAAT---TCAAATTCATCAAACCCTAATTTCACCTTCGGTTTATTCAC 919 Query 900 CAGAGAATTCGCTCGCCGTCACGGCCTCCACCTTCTCGGAACAACCACCACGTGGTTCCT 959 |||||||||||||||||||||||| |||||||||||||| ||||||||||| |||||||| Sbjct 920 CAGAGAATTCGCTCGCCGTCACGGTCTCCACCTTCTCGGCACAACCACCACATGGTTCCT 979 Query 960 CCTCGACATCGCCTATTACAGCAGCAACCTCTTCCAAAAAGACATCTACACCGCAATCGG 1019 ||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 980 CCTAGACATCGCCTATTACAGCAGCAACCTCTTCCAAAAAGACATCTACACAGCAATCGG 1039 Query 1020 ATGGATTCCCGCCGCCGAAACAATGAACGCAATCCACGAAGTCTTCACCGTCTCCAAAGC 1079 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 1040 ATGGATTCCCGCCGCCGAAACAATGAACGCAATCCACGAAGTCTTCACCGTCTCAAAAGC 1099 Query 1080 TCAAACCCTAATCGCTCTCTGCGGCACCGTCCCTGGTTACTGGTTCACCGTCGCATTCAT 1139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1100 TCAAACCCTAATCGCTCTCTGCGGCACCGTCCCTGGTTACTGGTTCACCGTCGCATTCAT 1159 Query 1140 CGATATACTCGGTCGATTCTTCATCCAATTGATGGGATTTATCTTCATGATGATCTTTAT 1199 ||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| Sbjct 1160 CGATATACTCGGTCGATTCTTCATCCAGTTGATGGGATTTATCTTCATGACGATCTTTAT 1219 Query 1200 GTTCGCTTTAGCGATTCCTTATGATCATTGGAGACATAGAGAGAATCGAATTGGTTTTTT 1259 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1220 GTTCGCTTTAGCGATTCCTTATGATCATTGGAGACATAGAGAGAATCGAATTGGTTTTTT 1279 Query 1260 GATTATGTATTCGTTGACGATGTTTTTCGCGAATTTTGGACCCAATGCGACGACGTTTGT 1319 |||||||||||||||||| ||||| ||||| ||||||||||| ||||||||||||||||| Sbjct 1280 GATTATGTATTCGTTGACTATGTTCTTCGCTAATTTTGGACCTAATGCGACGACGTTTGT 1339 Query 1320 TGTTCCTGCTGAGATATTTCCGGCGAGGTTGAGATCGACTTGTCATGGGATATCGGCGGC 1379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1340 TGTTCCTGCTGAGATATTTCCGGCGAGGTTGAGATCGACTTGTCATGGGATATCGGCGGC 1399 Query 1380 TTCTGGCAAGGCGGGTGCGATTGTTGGAGCTTTTGGGTTTCTTTACGCGGCGCAGAGTTC 1439 ||| |||||||| |||||||||||||| ||||||||||||||||||||||||||||| Sbjct 1400 GAGTGGTAAGGCGGGAGCGATTGTTGGAGCGTTTGGGTTTCTTTACGCGGCGCAGAGTTC 1459 Query 1440 GGATTCGGAGAAGACTGATGCTGGTTATCCTCCTGGGATTGGTGTTAGGAATTCGTTGTT 1499 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1460 GGATTCGGAGAAGACTGATGCTGGTTATCCTCCTGGGATTGGTGTTAGGAATTCGTTGTT 1519 Query 1500 GATGCTTGGTGGTGTTAATTTCTTTGGGATTGTTTTTACTCTGTTAGTTCCGGAGTCGAA 1559 |||||||| | ||||||||||||| |||||||||||||||||||| ||||||||||| || Sbjct 1520 GATGCTTGCTTGTGTTAATTTCTTGGGGATTGTTTTTACTCTGTTGGTTCCGGAGTCTAA 1579 Query 1560 AGGGAAGTCTTTGGAAGAGATTTCGAGAGAAGATGAGGAACAGAGCGGCGGAGATGCGGT 1619 |||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| Sbjct 1580 AGGGAAGTCTTTGGAAGAGATTTCGAGAGAAGATGAGGAACAAAGCGGCGGAGATACGGT 1639 Query 1620 GGTGGAGATGACTGCAGCAAATTCCGGTAGAACAGTTCCGGTGTGATTCtttttttGTGA 1679 |||||||||||||| |||||||||||||||| ||| ||||| ||||| |||| | || Sbjct 1640 GGTGGAGATGACTGTGGCAAATTCCGGTAGAAAAGTCCCGGTTTGATTATTTTGT-GT-- 1696 Query 1680 TACGCATTTTGTAA-TTT--TG-ATATATGAAAGTCCTTTG 1716 ||| |||||||||| ||| | |||||||||||||| ||| Sbjct 1697 TACTCATTTTGTAAATTTACTCTATATATGAAAGTCCCTTG 1737 > AT3G54700.1 | Symbols: PHT1;7 | phosphate transporter 1;7 | chr3:20248425-20250070 REVERSE LENGTH=1646 Length=1646 Score = 610 bits (330), Expect = 1e-173 Identities = 1176/1568 (75%), Gaps = 124/1568 (8%) Strand=Plus/Plus Query 55 GTGTTAAACGCTTTGGACG-CGGCCAAAACGCAGAT-GTACTATTTCACAGCGATTGTAA 112 ||| ||||||| | |||| | ||||||||||| || |||| ||||||| |||||| ||| Sbjct 22 GTGCTAAACGCACTCGACGTC-GCCAAAACGCA-ATGGTACCATTTCACGGCGATTATAA 79 Query 113 TCGCGGGTATGGGTTTTTTCACTGATGCTTACGATCTTTTCAGCATCTCTCTCGTCACCA 172 |||| || ||||| || ||||| || |||||||| ||||| | ||||| |||||||| | Sbjct 80 TCGCCGGAATGGGATTCTTCACCGACGCTTACGACCTTTTTTGTATCTCACTCGTCACAA 139 Query 173 AGCTCCTCGGCCGCATATACTACCACGTTGATGGCTCCA-AGAAGCCTGGAACGCTCCCC 231 |||| || ||||| || ||||| ||||| || |||| || ||||||| |||||||| || Sbjct 140 AGCTTCTTGGCCGTATTTACTATCACGTGGACGGCT-CAGAGAAGCCAGGAACGCTGCCA 198 Query 232 CCAAATGT-TGCTGCCGCTGTTAATGGTGTGGCTTTCTGCGGGACCCTCGCTGGCCAGCT 290 ||||| || | | |||||||||||||| || || |||||||| || ||||| |||||||| Sbjct 199 CCAAACGTCT-CAGCCGCTGTTAATGGAGTCGCCTTCTGCGGTACACTCGCAGGCCAGCT 257 Query 291 CTTCTTCGGTTGGCTCGGTGACAAGCTCGGCCGCAAGAAAGTTTACGGTATTACCTTGAT 350 |||||| || ||||||||||||||||| || | || |||||||||||||| ||| | || Sbjct 258 CTTCTTTGGCTGGCTCGGTGACAAGCTTGGGAGGAAAAAAGTTTACGGTATGACCCTCAT 317 Query 351 GGTCATGGTACTATGTT-CACTCGGGTCTGGTCTAT-CATT-CG-GTCACTCAGCTAACG 406 ||||||||| || |||| || ||| || ||||||| | || | || || || ||| Sbjct 318 GGTCATGGTTCTTTGTTCCA-TCGCTTCGGGTCTATCCTTTGGGAGTAACCCA-AAAAC- 374 Query 407 GAGTAATGGCCACACTTTGTTTCTTCCGGTTCTGGCTTGGTTTCGGCATAGGCGGCGACT 466 ||| ||| | ||||| |||||||||||||||||||||||||||||||| || || || | Sbjct 375 -AGTGATGACTACACTATGTTTCTTCCGGTTCTGGCTTGGTTTCGGCATTGGTGGTGATT 433 Query 467 ACCC-TCTCTCCGCCACTATCATGTCAGAATACGCCAACAAGAAGACACGTGGCGCGTTC 525 | || | | |||||||| || ||||| |||||||| || || ||||| ||||| ||||| Sbjct 434 ATCCGT-TATCCGCCACGATTATGTCTGAATACGCTAATAAAAAGACCCGTGGTGCGTTT 492 Query 526 ATAGCAGCCGTCTTTGCTATGCAAGGCTTCGGAATCTT-AGCCGGAGGAATCGT-GTCTC 583 ||||| ||||| |||||||||||||| || |||||||| | |||| || || | | | Sbjct 493 ATAGCCGCCGTTTTTGCTATGCAAGGGTTTGGAATCTTGA-CCGGGGGGATTTTTGCCA- 550 Query 584 TCATCGTCTC-GAGTGCATTCGAC-C-ATGCTTTCGACGCACCCACCTA-CGAAGTTGAT 639 ||||||| || | || ||||| | | |||| | || || ||||| | || | ||| Sbjct 551 TCATCGTGTCTGCC-GCTTTCGAGGCTAAA-TTTCCA-GCTCCAACCTATCAAA-TAGAT 606 Query 640 -CCGGTTGGG-TCCACTGTTCCTCAGGCGGATTACGTGTGGCGGATTGTGCTCATGTTTG 697 || |||| ||||| ||||||||||||||||| ||||||||||| | || ||| | | Sbjct 607 GCC--TTGGCATCCACGGTTCCTCAGGCGGATTATGTGTGGCGGATCATACTGATGGTGG 664 Query 698 GAGCTATT-CCGGC-GTTACTTACTTATTATTGGCGGATG-AAGATGCCGGAAACTGCTC 754 | ||| || || || | | | || ||||| | || | |||||||| || ||||| | Sbjct 665 GTGCT-TTGCCTGCAGCGA-TGACGTATTACTCAAGG-TCCAAGATGCCTGAGACTGCCC 721 Query 755 GGTATACCGCTCTTGTTGCCC-GGAATACCAAACAAGCCGCCTCCGATATGTCTAAGGTG 813 |||| || |||||||| ||| ||| | |||| ||| || || | ||||||||||| Sbjct 722 GGTACACGGCTCTTGTGGCCAAGGACG-CGAAACTAGCGGCTTCAAACATGTCTAAGGTT 780 Query 814 CTT-CAAGTGGATCTAATTGCAGAAGAAGAAGCA-CAACCAAATCAGTCATCTTCATCAA 871 || |||||||| | | | |||| ||| ||| || || | | | || || Sbjct 781 -TTGCAAGTGGAG--A-T--C-GAAGCAGA-GCAGCAGGGAACTGA---AG----AT-AA 824 Query 872 ACCCTAATTCCTCCTTCGGCTTATTCTCCAGAG-AATTCGCTCGC--CGTCACGGCCTCC 928 || ||||||| || ||||| || |||| || ||||| | | || || ||||| | Sbjct 825 GTCC-AATTCCT--TT-GGCTTGTTTTCCA-AGGAATTCA-T-GAAACGCCATGGCCTTC 877 Query 929 ACCTT-CTCGGAACAACCACCACGTGGTTCCTCCTCGACATCGCCTAT-TACAG-CAGCA 985 | || || ||||| || | ||| |||||||| ||||||||||||| | ||||| ||| | Sbjct 878 AT-TTGCTAGGAACTACAAGCACATGGTTCCTACTCGACATCGCCT-TCTACAGTCAG-A 934 Query 986 ACCTCTTCCAAAAAGACATCTACACCGCAATCGGATGGATTCCCGCCGCCGAA-ACAATG 1044 |||| ||||| ||||| || | || ||||||||||||||| ||| ||| | | |||||| Sbjct 935 ACCTATTCCAGAAAGATATTTTCAGCGCAATCGGATGGAT-CCCTCCGGCTCAGACAATG 993 Query 1045 AACGCAATCCACGAAGTCTTCACCG-TCTCCAAA-GCTCAAACCCTAATCGCTCTCTGCG 1102 |||||||| || || || |||| | | | || || |||||||||||||| || || | Sbjct 994 AACGCAATTCAAGAGGTTTTCAA-GAT-TGCACGTGCACAAACCCTAATCGC-CT-TGTG 1049 Query 1103 --GCACCGTCCCTGGTTACTGGTTCACCGTCGCATTCATCGATAT-ACTCGGTCGATTCT 1159 |||| || ||||||||||||||||| || || || || || | | | ||| |||| | Sbjct 1050 TAGCACGGTACCTGGTTACTGGTTCACAGTGGCCTTTATTGACGTCATT-GGTAGATT-T 1107 Query 1160 TC-ATCCA-ATTGATGGGATTTAT-CTTCATGAT-GATCTTTATGTTCGCTTTAGCGATT 1215 | || || || |||||| ||| | ||| |||| | |||||||||||||| | || ||| Sbjct 1108 GCGATACAGAT-GATGGG-TTTCTTCTTTATGACCG-TCTTTATGTTCGCTCTCGCCATT 1164 Query 1216 CCTTATGATCATTGGAGACATAGAG-AGAATC-GAATTGGTTTT-TTGATTATGTATTCG 1272 ||||| || ||||||| || | || |||| | |||| || || ||| | ||||| || Sbjct 1165 CCTTACGACCATTGGACTCACA-AGGAGAA-CAGAATCGGATTCGTTGCT-ATGTACTC- 1220 Query 1273 T-TGACGATGT-TT-TTCGCGAATTTTGGACCCAATGCGACGACGTTT-GTTGTTCCTGC 1328 | | || || | || ||||| || |||||||| ||||| || || ||| ||||| || || Sbjct 1221 TCTAAC-AT-TCTTCTTCGCCAACTTTGGACCTAATGCAACAAC-TTTCGTTGTGCCCGC 1277 Query 1329 TGAGATATTTCCGGCGAGGTTGAGATCGACTTGTCATGGGATATCGGCGGCTTCTGGCAA 1388 |||||| || ||||| ||||| ||||| || || ||||| || || ||||||||||| || Sbjct 1278 TGAGATCTTCCCGGCTAGGTTTAGATCAACCTGCCATGGAATTTCCGCGGCTTCTGGAAA 1337 Query 1389 GGCGGGTGCGATTGTTGGAGCTTTTGGGTTTCTT-TACGCGGCGCAGAGTTCGGATTCGG 1447 || || || ||||| || |||||||| ||| ||| || || ||| | || | Sbjct 1338 ATTAGGAGCAATGGTTGGTGCGTTTGGGTT-CTTGTACTTAGCACAAAGTCCTGACAAG- 1395 Query 1448 AG-AAGACTGATGC-TGGTTATCCTCCTGGGATTGGTGTTAGGAATTCGTTG-TTGATGC 1504 | ||||| || || ||| |||||||| || ||||| || | ||| || | ||| | Sbjct 1396 ACCAAGACAGA-GCATGGATATCCTCCAGGTATTGGAGTCAAGAACTCCCTCATTGTT-- 1452 Query 1505 TTGG-TGGTG-TTAATTTCTTTGGG-ATTGTTTTTACTCTGTTAGTTCCGGAGTCGAAAG 1561 |||| || || ||||| | |||||| || |||||||| ||||| ||||| || || |||| Sbjct 1453 TTGGGTG-TGGTTAATCT-TTTGGGGATGGTTTTTACACTGTTGGTTCCTGAATCTAAAG 1510 Query 1562 GGAAGTCT 1569 | |||||| Sbjct 1511 GCAAGTCT 1518 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 84838921050 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5