BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg482224
Length=1716
Score E
Sequences producing significant alignments: (Bits) Value
AT2G32830.1 | Symbols: PHT5, PHT1;5 | phosphate transporter 1;5... 2601 0.0
AT3G54700.1 | Symbols: PHT1;7 | phosphate transporter 1;7 | chr... 610 1e-173
> AT2G32830.1 | Symbols: PHT5, PHT1;5 | phosphate transporter 1;5
| chr2:13927699-13929713 REVERSE LENGTH=1740
Length=1740
Score = 2601 bits (1408), Expect = 0.0
Identities = 1619/1721 (94%), Gaps = 13/1721 (1%)
Strand=Plus/Plus
Query 1 TTCTCTCAGGTGAGTAAACAACAGaaaaaaaaaaTGGCGAGGAAAGGGAAAGAAGTGTTA 60
||||||||||||| | |||||||| | ||||| ||||||| ||||| |||||||||||
Sbjct 25 TTCTCTCAGGTGACTGAACAACAG-AGAAAAACATGGCGAAAAAAGGAAAAGAAGTGTTG 83
Query 61 AACGCTTTGGACGCGGCCAAAACGCAGATGTACTATTTCACAGCGATTGTAATCGCGGGT 120
|||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 84 AACGCTTTGGACGCAGCCAAAACGCAGATGTACCATTTCACAGCGATTGTAATCGCGGGT 143
Query 121 ATGGGTTTTTTCACTGATGCTTACGATCT-TTTCAGCATCTCTCTCGTCACCAAGCTCCT 179
||||||||||||||||||||||||||||| ||| |||||||| |||||||| ||||||||
Sbjct 144 ATGGGTTTTTTCACTGATGCTTACGATCTATTT-AGCATCTCCCTCGTCACGAAGCTCCT 202
Query 180 CGGCCGCATATACTACCACGTTGATGGCTCCAAGAAGCCTGGAACGCTCCCCCCAAATGT 239
|||||||||||||||||||||||| ||||||||||||||||||||||||| || |||||
Sbjct 203 AGGCCGCATATACTACCACGTTGATAGCTCCAAGAAGCCTGGAACGCTCCCTCCTAATGT 262
Query 240 TGCTGCCGCTGTTAATGGTGTGGCTTTCTGCGGGACCCTCGCTGGCCAGCTCTTCTTCGG 299
|||||||||||||||||||||||| |||||||| ||| | || |||||||||||||||||
Sbjct 263 TGCTGCCGCTGTTAATGGTGTGGCCTTCTGCGGTACCTTAGCAGGCCAGCTCTTCTTCGG 322
Query 300 TTGGCTCGGTGACAAGCTCGGCCGCAAGAAAGTTTACGGTATTACCTTGATGGTCATGGT 359
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 323 TTGGCTCGGTGACAAGCTCGGCCGCAAGAAAGTTTACGGTATTACCTTGATGCTCATGGT 382
Query 360 ACTATGTTCACTCGGGTCTGGTCTATCATTCGGTCACTCAGCTAACGGAGTAATGGCCAC 419
||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 383 ACTATGTTCTCTCGGGTCTGGTCTATCATTTGGTCACTCAGCTAACGGAGTAATGGCCAC 442
Query 420 ACTTTGTTTCTTCCGGTTCTGGCTTGGTTTCGGCATAGGCGGCGACTACCCTCTCTCCGC 479
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||
Sbjct 443 ACTTTGTTTCTTCCGGTTCTGGCTCGGTTTCGGCATAGGCGGCGACTACCCTCTCTCAGC 502
Query 480 CACTATCATGTCAGAATACGCCAACAAGAAGACACGTGGCGCGTTCATAGCAGCCGTCTT 539
||| |||||||| ||||||||||||||||| ||||||||||| |||||||||||||||||
Sbjct 503 CACCATCATGTCGGAATACGCCAACAAGAAAACACGTGGCGCCTTCATAGCAGCCGTCTT 562
Query 540 TGCTATGCAAGGCTTCGGAATCTTAGCCGGAGGAATCGTGTCTCTCATCGTCTCGAGTGC 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 563 CGCTATGCAAGGCTTCGGAATCTTAGCCGGAGGAATCGTGTCTCTCATCGTCTCGAGTAC 622
Query 600 ATTCGACCATGCTTTCGACGCACCCACCTACGAAGTTGATCCGGTTGGGTCCACTGTTCC 659
||| |||||||| ||| | || ||||||||||| |||||||| ||||| |||||||||||
Sbjct 623 ATTTGACCATGCCTTCAAAGCGCCCACCTACGAGGTTGATCCTGTTGGCTCCACTGTTCC 682
Query 660 TCAGGCGGATTACGTGTGGCGGATTGTGCTCATGTTTGGAGCTATTCCGGCGTTACTTAC 719
||| ||||||||||||||||||||||||||||||||||||||||| || || ||||||||
Sbjct 683 TCAAGCGGATTACGTGTGGCGGATTGTGCTCATGTTTGGAGCTATCCCAGCTTTACTTAC 742
Query 720 TTATTATTGGCGGATGAAGATGCCGGAAACTGCTCGGTATACCGCTCTTGTTGCCCGGAA 779
|||||||||||||||||| |||||||||||||||||||||||||||||||| || |||||
Sbjct 743 TTATTATTGGCGGATGAAAATGCCGGAAACTGCTCGGTATACCGCTCTTGTAGCTCGGAA 802
Query 780 TACCAAACAAGCCGCCTCCGATATGTCTAAGGTGCTTCAAGTGGATCTAATTGCAGAAGA 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 803 TACCAAACAAGCCGCCTCCGATATGTCTAAGGTGCTTCAAGTGGATCTAATTGCAGAAGA 862
Query 840 AGAAGCACAACCAAATCAGTCATCTTCATCAAACCCTAATTCCTCCTTCGGCTTATTCTC 899
|||||||||| ||||| ||| ||||||||||||||||| | ||||||| |||||| |
Sbjct 863 AGAAGCACAATCAAAT---TCAAATTCATCAAACCCTAATTTCACCTTCGGTTTATTCAC 919
Query 900 CAGAGAATTCGCTCGCCGTCACGGCCTCCACCTTCTCGGAACAACCACCACGTGGTTCCT 959
|||||||||||||||||||||||| |||||||||||||| ||||||||||| ||||||||
Sbjct 920 CAGAGAATTCGCTCGCCGTCACGGTCTCCACCTTCTCGGCACAACCACCACATGGTTCCT 979
Query 960 CCTCGACATCGCCTATTACAGCAGCAACCTCTTCCAAAAAGACATCTACACCGCAATCGG 1019
||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 980 CCTAGACATCGCCTATTACAGCAGCAACCTCTTCCAAAAAGACATCTACACAGCAATCGG 1039
Query 1020 ATGGATTCCCGCCGCCGAAACAATGAACGCAATCCACGAAGTCTTCACCGTCTCCAAAGC 1079
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1040 ATGGATTCCCGCCGCCGAAACAATGAACGCAATCCACGAAGTCTTCACCGTCTCAAAAGC 1099
Query 1080 TCAAACCCTAATCGCTCTCTGCGGCACCGTCCCTGGTTACTGGTTCACCGTCGCATTCAT 1139
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1100 TCAAACCCTAATCGCTCTCTGCGGCACCGTCCCTGGTTACTGGTTCACCGTCGCATTCAT 1159
Query 1140 CGATATACTCGGTCGATTCTTCATCCAATTGATGGGATTTATCTTCATGATGATCTTTAT 1199
||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||
Sbjct 1160 CGATATACTCGGTCGATTCTTCATCCAGTTGATGGGATTTATCTTCATGACGATCTTTAT 1219
Query 1200 GTTCGCTTTAGCGATTCCTTATGATCATTGGAGACATAGAGAGAATCGAATTGGTTTTTT 1259
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1220 GTTCGCTTTAGCGATTCCTTATGATCATTGGAGACATAGAGAGAATCGAATTGGTTTTTT 1279
Query 1260 GATTATGTATTCGTTGACGATGTTTTTCGCGAATTTTGGACCCAATGCGACGACGTTTGT 1319
|||||||||||||||||| ||||| ||||| ||||||||||| |||||||||||||||||
Sbjct 1280 GATTATGTATTCGTTGACTATGTTCTTCGCTAATTTTGGACCTAATGCGACGACGTTTGT 1339
Query 1320 TGTTCCTGCTGAGATATTTCCGGCGAGGTTGAGATCGACTTGTCATGGGATATCGGCGGC 1379
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1340 TGTTCCTGCTGAGATATTTCCGGCGAGGTTGAGATCGACTTGTCATGGGATATCGGCGGC 1399
Query 1380 TTCTGGCAAGGCGGGTGCGATTGTTGGAGCTTTTGGGTTTCTTTACGCGGCGCAGAGTTC 1439
||| |||||||| |||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1400 GAGTGGTAAGGCGGGAGCGATTGTTGGAGCGTTTGGGTTTCTTTACGCGGCGCAGAGTTC 1459
Query 1440 GGATTCGGAGAAGACTGATGCTGGTTATCCTCCTGGGATTGGTGTTAGGAATTCGTTGTT 1499
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1460 GGATTCGGAGAAGACTGATGCTGGTTATCCTCCTGGGATTGGTGTTAGGAATTCGTTGTT 1519
Query 1500 GATGCTTGGTGGTGTTAATTTCTTTGGGATTGTTTTTACTCTGTTAGTTCCGGAGTCGAA 1559
|||||||| | ||||||||||||| |||||||||||||||||||| ||||||||||| ||
Sbjct 1520 GATGCTTGCTTGTGTTAATTTCTTGGGGATTGTTTTTACTCTGTTGGTTCCGGAGTCTAA 1579
Query 1560 AGGGAAGTCTTTGGAAGAGATTTCGAGAGAAGATGAGGAACAGAGCGGCGGAGATGCGGT 1619
|||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||
Sbjct 1580 AGGGAAGTCTTTGGAAGAGATTTCGAGAGAAGATGAGGAACAAAGCGGCGGAGATACGGT 1639
Query 1620 GGTGGAGATGACTGCAGCAAATTCCGGTAGAACAGTTCCGGTGTGATTCtttttttGTGA 1679
|||||||||||||| |||||||||||||||| ||| ||||| ||||| |||| | ||
Sbjct 1640 GGTGGAGATGACTGTGGCAAATTCCGGTAGAAAAGTCCCGGTTTGATTATTTTGT-GT-- 1696
Query 1680 TACGCATTTTGTAA-TTT--TG-ATATATGAAAGTCCTTTG 1716
||| |||||||||| ||| | |||||||||||||| |||
Sbjct 1697 TACTCATTTTGTAAATTTACTCTATATATGAAAGTCCCTTG 1737
> AT3G54700.1 | Symbols: PHT1;7 | phosphate transporter 1;7 | chr3:20248425-20250070
REVERSE LENGTH=1646
Length=1646
Score = 610 bits (330), Expect = 1e-173
Identities = 1176/1568 (75%), Gaps = 124/1568 (8%)
Strand=Plus/Plus
Query 55 GTGTTAAACGCTTTGGACG-CGGCCAAAACGCAGAT-GTACTATTTCACAGCGATTGTAA 112
||| ||||||| | |||| | ||||||||||| || |||| ||||||| |||||| |||
Sbjct 22 GTGCTAAACGCACTCGACGTC-GCCAAAACGCA-ATGGTACCATTTCACGGCGATTATAA 79
Query 113 TCGCGGGTATGGGTTTTTTCACTGATGCTTACGATCTTTTCAGCATCTCTCTCGTCACCA 172
|||| || ||||| || ||||| || |||||||| ||||| | ||||| |||||||| |
Sbjct 80 TCGCCGGAATGGGATTCTTCACCGACGCTTACGACCTTTTTTGTATCTCACTCGTCACAA 139
Query 173 AGCTCCTCGGCCGCATATACTACCACGTTGATGGCTCCA-AGAAGCCTGGAACGCTCCCC 231
|||| || ||||| || ||||| ||||| || |||| || ||||||| |||||||| ||
Sbjct 140 AGCTTCTTGGCCGTATTTACTATCACGTGGACGGCT-CAGAGAAGCCAGGAACGCTGCCA 198
Query 232 CCAAATGT-TGCTGCCGCTGTTAATGGTGTGGCTTTCTGCGGGACCCTCGCTGGCCAGCT 290
||||| || | | |||||||||||||| || || |||||||| || ||||| ||||||||
Sbjct 199 CCAAACGTCT-CAGCCGCTGTTAATGGAGTCGCCTTCTGCGGTACACTCGCAGGCCAGCT 257
Query 291 CTTCTTCGGTTGGCTCGGTGACAAGCTCGGCCGCAAGAAAGTTTACGGTATTACCTTGAT 350
|||||| || ||||||||||||||||| || | || |||||||||||||| ||| | ||
Sbjct 258 CTTCTTTGGCTGGCTCGGTGACAAGCTTGGGAGGAAAAAAGTTTACGGTATGACCCTCAT 317
Query 351 GGTCATGGTACTATGTT-CACTCGGGTCTGGTCTAT-CATT-CG-GTCACTCAGCTAACG 406
||||||||| || |||| || ||| || ||||||| | || | || || || |||
Sbjct 318 GGTCATGGTTCTTTGTTCCA-TCGCTTCGGGTCTATCCTTTGGGAGTAACCCA-AAAAC- 374
Query 407 GAGTAATGGCCACACTTTGTTTCTTCCGGTTCTGGCTTGGTTTCGGCATAGGCGGCGACT 466
||| ||| | ||||| |||||||||||||||||||||||||||||||| || || || |
Sbjct 375 -AGTGATGACTACACTATGTTTCTTCCGGTTCTGGCTTGGTTTCGGCATTGGTGGTGATT 433
Query 467 ACCC-TCTCTCCGCCACTATCATGTCAGAATACGCCAACAAGAAGACACGTGGCGCGTTC 525
| || | | |||||||| || ||||| |||||||| || || ||||| ||||| |||||
Sbjct 434 ATCCGT-TATCCGCCACGATTATGTCTGAATACGCTAATAAAAAGACCCGTGGTGCGTTT 492
Query 526 ATAGCAGCCGTCTTTGCTATGCAAGGCTTCGGAATCTT-AGCCGGAGGAATCGT-GTCTC 583
||||| ||||| |||||||||||||| || |||||||| | |||| || || | | |
Sbjct 493 ATAGCCGCCGTTTTTGCTATGCAAGGGTTTGGAATCTTGA-CCGGGGGGATTTTTGCCA- 550
Query 584 TCATCGTCTC-GAGTGCATTCGAC-C-ATGCTTTCGACGCACCCACCTA-CGAAGTTGAT 639
||||||| || | || ||||| | | |||| | || || ||||| | || | |||
Sbjct 551 TCATCGTGTCTGCC-GCTTTCGAGGCTAAA-TTTCCA-GCTCCAACCTATCAAA-TAGAT 606
Query 640 -CCGGTTGGG-TCCACTGTTCCTCAGGCGGATTACGTGTGGCGGATTGTGCTCATGTTTG 697
|| |||| ||||| ||||||||||||||||| ||||||||||| | || ||| | |
Sbjct 607 GCC--TTGGCATCCACGGTTCCTCAGGCGGATTATGTGTGGCGGATCATACTGATGGTGG 664
Query 698 GAGCTATT-CCGGC-GTTACTTACTTATTATTGGCGGATG-AAGATGCCGGAAACTGCTC 754
| ||| || || || | | | || ||||| | || | |||||||| || ||||| |
Sbjct 665 GTGCT-TTGCCTGCAGCGA-TGACGTATTACTCAAGG-TCCAAGATGCCTGAGACTGCCC 721
Query 755 GGTATACCGCTCTTGTTGCCC-GGAATACCAAACAAGCCGCCTCCGATATGTCTAAGGTG 813
|||| || |||||||| ||| ||| | |||| ||| || || | |||||||||||
Sbjct 722 GGTACACGGCTCTTGTGGCCAAGGACG-CGAAACTAGCGGCTTCAAACATGTCTAAGGTT 780
Query 814 CTT-CAAGTGGATCTAATTGCAGAAGAAGAAGCA-CAACCAAATCAGTCATCTTCATCAA 871
|| |||||||| | | | |||| ||| ||| || || | | | || ||
Sbjct 781 -TTGCAAGTGGAG--A-T--C-GAAGCAGA-GCAGCAGGGAACTGA---AG----AT-AA 824
Query 872 ACCCTAATTCCTCCTTCGGCTTATTCTCCAGAG-AATTCGCTCGC--CGTCACGGCCTCC 928
|| ||||||| || ||||| || |||| || ||||| | | || || ||||| |
Sbjct 825 GTCC-AATTCCT--TT-GGCTTGTTTTCCA-AGGAATTCA-T-GAAACGCCATGGCCTTC 877
Query 929 ACCTT-CTCGGAACAACCACCACGTGGTTCCTCCTCGACATCGCCTAT-TACAG-CAGCA 985
| || || ||||| || | ||| |||||||| ||||||||||||| | ||||| ||| |
Sbjct 878 AT-TTGCTAGGAACTACAAGCACATGGTTCCTACTCGACATCGCCT-TCTACAGTCAG-A 934
Query 986 ACCTCTTCCAAAAAGACATCTACACCGCAATCGGATGGATTCCCGCCGCCGAA-ACAATG 1044
|||| ||||| ||||| || | || ||||||||||||||| ||| ||| | | ||||||
Sbjct 935 ACCTATTCCAGAAAGATATTTTCAGCGCAATCGGATGGAT-CCCTCCGGCTCAGACAATG 993
Query 1045 AACGCAATCCACGAAGTCTTCACCG-TCTCCAAA-GCTCAAACCCTAATCGCTCTCTGCG 1102
|||||||| || || || |||| | | | || || |||||||||||||| || || |
Sbjct 994 AACGCAATTCAAGAGGTTTTCAA-GAT-TGCACGTGCACAAACCCTAATCGC-CT-TGTG 1049
Query 1103 --GCACCGTCCCTGGTTACTGGTTCACCGTCGCATTCATCGATAT-ACTCGGTCGATTCT 1159
|||| || ||||||||||||||||| || || || || || | | | ||| |||| |
Sbjct 1050 TAGCACGGTACCTGGTTACTGGTTCACAGTGGCCTTTATTGACGTCATT-GGTAGATT-T 1107
Query 1160 TC-ATCCA-ATTGATGGGATTTAT-CTTCATGAT-GATCTTTATGTTCGCTTTAGCGATT 1215
| || || || |||||| ||| | ||| |||| | |||||||||||||| | || |||
Sbjct 1108 GCGATACAGAT-GATGGG-TTTCTTCTTTATGACCG-TCTTTATGTTCGCTCTCGCCATT 1164
Query 1216 CCTTATGATCATTGGAGACATAGAG-AGAATC-GAATTGGTTTT-TTGATTATGTATTCG 1272
||||| || ||||||| || | || |||| | |||| || || ||| | ||||| ||
Sbjct 1165 CCTTACGACCATTGGACTCACA-AGGAGAA-CAGAATCGGATTCGTTGCT-ATGTACTC- 1220
Query 1273 T-TGACGATGT-TT-TTCGCGAATTTTGGACCCAATGCGACGACGTTT-GTTGTTCCTGC 1328
| | || || | || ||||| || |||||||| ||||| || || ||| ||||| || ||
Sbjct 1221 TCTAAC-AT-TCTTCTTCGCCAACTTTGGACCTAATGCAACAAC-TTTCGTTGTGCCCGC 1277
Query 1329 TGAGATATTTCCGGCGAGGTTGAGATCGACTTGTCATGGGATATCGGCGGCTTCTGGCAA 1388
|||||| || ||||| ||||| ||||| || || ||||| || || ||||||||||| ||
Sbjct 1278 TGAGATCTTCCCGGCTAGGTTTAGATCAACCTGCCATGGAATTTCCGCGGCTTCTGGAAA 1337
Query 1389 GGCGGGTGCGATTGTTGGAGCTTTTGGGTTTCTT-TACGCGGCGCAGAGTTCGGATTCGG 1447
|| || || ||||| || |||||||| ||| ||| || || ||| | || |
Sbjct 1338 ATTAGGAGCAATGGTTGGTGCGTTTGGGTT-CTTGTACTTAGCACAAAGTCCTGACAAG- 1395
Query 1448 AG-AAGACTGATGC-TGGTTATCCTCCTGGGATTGGTGTTAGGAATTCGTTG-TTGATGC 1504
| ||||| || || ||| |||||||| || ||||| || | ||| || | ||| |
Sbjct 1396 ACCAAGACAGA-GCATGGATATCCTCCAGGTATTGGAGTCAAGAACTCCCTCATTGTT-- 1452
Query 1505 TTGG-TGGTG-TTAATTTCTTTGGG-ATTGTTTTTACTCTGTTAGTTCCGGAGTCGAAAG 1561
|||| || || ||||| | |||||| || |||||||| ||||| ||||| || || ||||
Sbjct 1453 TTGGGTG-TGGTTAATCT-TTTGGGGATGGTTTTTACACTGTTGGTTCCTGAATCTAAAG 1510
Query 1562 GGAAGTCT 1569
| ||||||
Sbjct 1511 GCAAGTCT 1518
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 84838921050
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5