BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg482247
Length=3282
Score E
Sequences producing significant alignments: (Bits) Value
AT2G33100.1 | Symbols: ATCSLD1, CSLD1 | cellulose synthase-like... 5361 0.0
AT3G03050.1 | Symbols: CSLD3, KJK, ATCSLD3 | cellulose synthase... 459 1e-127
AT1G02730.1 | Symbols: ATCSLD5, CSLD5, SOS6 | cellulose synthas... 291 4e-77
> AT2G33100.1 | Symbols: ATCSLD1, CSLD1 | cellulose synthase-like
D1 | chr2:14036319-14040044 REVERSE LENGTH=3286
Length=3286
Score = 5361 bits (2903), Expect = 0.0
Identities = 3157/3283 (96%), Gaps = 4/3283 (0%)
Strand=Plus/Plus
Query 1 ATGGCTTCAAGTCCACCAAAGAAGACCTTAAATTCACAATCTTCCCCCTTAAGCCGGCCT 60
||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct 1 ATGGCTTCAAGTCCACCCAAGAAGACCTTAAATTCACAATCTTCTTCCTTAAGCCGGCCT 60
Query 61 CCACAAGCTGTCAAGTTTGGTCGCCGGACGTCCAGTGGTCGCATTGTTAGCCTCTCCCGT 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 61 CCACAAGCTGTCAAGTTTGGTCGCCGGACGTCCAGTGGTCGCATTGTTAGCCTCTCCCGT 120
Query 121 GACGATGACATGGACGTCTCTGGCGATTACTCCAGCCAAAATGATTACATCAATTACACC 180
||||||||||||||||||||||| ||||||||| ||||||||||||||||||| ||||||
Sbjct 121 GACGATGACATGGACGTCTCTGGTGATTACTCCGGCCAAAATGATTACATCAACTACACC 180
Query 181 GTCCTCATGCCTCCAACACCAGACAACCAACCTGCTGGCTCCTCCGGGTCCACCTCGGAG 240
|||||||||||||||||||| ||||||||||||||||||||||| || ||||||||||||
Sbjct 181 GTCCTCATGCCTCCAACACCTGACAACCAACCTGCTGGCTCCTCTGGCTCCACCTCGGAG 240
Query 241 TCGAAAGGTGATGCAAACCGAGGTGGAGGAGGAGGAGACGGGCCTAAGATGGGGAATAAG 300
|| ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 241 TCTAAAGGTGATGCTAACCGAGGTGGAGGAGGAGGAGACGGGCCCAAGATGGGGAATAAG 300
Query 301 CTGGAGAGGAGATTATCTGTCATGAAATCGAATAACAAATCAATGTTGTTGAGGAGCCAG 360
|||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 301 CTGGAGAGGAGATTGTCTGTCATGAAATCAAATAACAAATCAATGTTGTTGAGGAGCCAG 360
Query 361 ACGGGAGATTTTGATCATAACAGGTGGTTGTTTGAGTCTAAAGGAAAATACGGTATTGGA 420
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 361 ACGGGAGATTTTGATCATAACAGGTGGTTGTTTGAATCTAAAGGAAAATACGGTATTGGA 420
Query 421 AACGCGTTTTGGTCAGAAGAGGATGATACGTATGATGGTGGCGTTAGCAAGTCCGATTTC 480
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 421 AACGCGTTTTGGTCAGAAGAGGATGATACCTATGATGGTGGCGTTAGCAAGTCCGATTTC 480
Query 481 TTAGACAAGCCATGGAAACCTCTCACGAGGAAAGTTAAGGTCCCGGCCAAAGTTCTTAGT 540
|||||||||||||||||||||||||||||||||||| || ||||||||||| ||||||||
Sbjct 481 TTAGACAAGCCATGGAAACCTCTCACGAGGAAAGTTCAGATCCCGGCCAAAATTCTTAGT 540
Query 541 CCCTACAGGTTATTAATCGTGATTCGTCTTGTGATAGTCTTCTTCTTCCTTTGGTGGCGT 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 541 CCCTACAGGTTATTAATCGTGATTCGTCTTGTGATAGTCTTCTTCTTCCTTTGGTGGCGT 600
Query 601 GTTACGAATCCTAATGAGGATGCAATGTGGCTATGGGGACTGTCGATAGTCTGCGAGATT 660
||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||||||
Sbjct 601 ATTACGAACCCTAATGAGGATGCAATGTGGTTATGGGGACTATCGATAGTCTGCGAGATT 660
Query 661 TGGTTTGCTTTCTCTTGGATTCTTGACATTCTTCCGAAGCTAAACCCTATAAACCGAGCC 720
||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 661 TGGTTCGCTTTCTCTTGGATTCTTGACATTCTTCCGAAGCTAAACCCTATAAATAGAGCT 720
Query 721 ACGGACCTTGCTGTCTTGCATGACAAATTTGAGCAGCCCTCTCCGTCAAATCCCACTGGT 780
|| |||||||||| |||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 721 ACTGACCTTGCTGCCTTGCATGACAAGTTTGAGCAGCCCTCTCCGTCAAATCCCACTGGT 780
Query 781 CGCTCTGATCTTCCCGGTGTTGATGTGTTTGTTTCCACGGCTGACCCAGAAAAAGAACCG 840
||||||||||||||||||||||||||||| ||||||||||||||||| || || ||||||
Sbjct 781 CGCTCTGATCTTCCCGGTGTTGATGTGTTCGTTTCCACGGCTGACCCTGAGAAGGAACCG 840
Query 841 CCTTTAGTCACTGCAAATACCCTTCTCTCGATCCTTGCCGTGGATTATCCAATTGAGAAG 900
||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||
Sbjct 841 CCTTTAGTCACTGCAAACACCCTTCTCTCGATCCTTGCTGTGGATTATCCAATTGAGAAG 900
Query 901 CTTTCTGCCTACATTTCAGACGATGGTGGTGCAATTCTCACCTTTGAAGCCATGGCTGAA 960
|||||||| |||||||| |||||||||||||||||||||||||||||||| |||||||||
Sbjct 901 CTTTCTGCTTACATTTCTGACGATGGTGGTGCAATTCTCACCTTTGAAGCTATGGCTGAA 960
Query 961 GCTGTTCGTTTTGCTGAGTATTGGGTGCCATTTTGCAGAAAACATGATATAGAGCCACGG 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 961 GCTGTTCGTTTTGCTGAGTATTGGGTGCCATTTTGCAGAAAACATGATATAGAGCCACGG 1020
Query 1021 AACCCGGATAGTTACTTTAACATTAAAAAGGACCCTACAAAAAACAAGAAAAGGCAAGAT 1080
||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||
Sbjct 1021 AACCCGGATAGTTACTTTAGCATTAAAAAGGACCCAACAAAAAACAAGAAAAGGCAAGAT 1080
Query 1081 TTTGTCAAAGATCGTCGTTGGATCAAGCGTGAGTATGACGAATTCAAGGTCAGGATCAAT 1140
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1081 TTCGTCAAAGATCGTCGTTGGATCAAGCGTGAGTATGACGAATTCAAGGTCAGGATCAAT 1140
Query 1141 GGTCTTCCAGAACAAATCAAGAAAAGAGCTGAACAATTCAACATGAGAGAAGAGCTCAAG 1200
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1141 GGTCTTCCAGAACAAATCAAGAAAAGAGCTGAACAGTTCAACATGAGAGAAGAGCTCAAG 1200
Query 1201 GAGAAGCGAATTGCCCGAGAGAAAAATGGGGGCGTATTGCCGCCAGATGGGGTTGAGGTG 1260
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1201 GAGAAGCGAATTGCCCGAGAGAAAAATGGGGGTGTATTGCCGCCAGATGGGGTTGAGGTG 1260
Query 1261 GTAAAAGCAACGTGGATGGCTGATGGTACGCATTGGCCAGGGACATGGTTTGAACCTAAA 1320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1261 GTAAAAGCAACGTGGATGGCTGATGGTACGCATTGGCCAGGGACATGGTTTGAACCTAAA 1320
Query 1321 CCTGATCATTCAAAAGGGGATCACGCCGGAATTCTACAGATCATGAGCAAAGTGCCTGAG 1380
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1321 CCTGATCATTCAAAAGGAGATCACGCCGGAATTCTACAGATCATGAGCAAAGTGCCTGAT 1380
Query 1381 CTTGAACCGGTTATGGGTGGACCGAATGAAGGCGCTCTGGATTTCACAGGAATTGATATT 1440
||||||||||| ||||| ||||||||||||||||| || ||||||||||| |||||||||
Sbjct 1381 CTTGAACCGGTGATGGGCGGACCGAATGAAGGCGCGCTAGATTTCACAGGGATTGATATT 1440
Query 1441 CGCGTACCTATGTTTGCTTATGTCTCGCGTGAGAAACGTCCAGGTTTTGACCACAACAAG 1500
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1441 CGTGTACCTATGTTTGCTTATGTCTCGCGTGAGAAACGTCCAGGTTTTGACCACAACAAG 1500
Query 1501 AAAGCCGGTGCCATGAATGGTATGGTTAGAGCTTCAGCCATACTATCCAATGGCGCGTTC 1560
|||||||| || |||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1501 AAAGCCGGCGCTATGAATGGTATGGTTAGAGCTTCAGCCATATTATCCAATGGCGCGTTT 1560
Query 1561 ATCCTGAATCTAGACTGTGATCACTACATCTACAATTCCAAAGCTATCAAGGAAGGAATG 1620
||||| ||||| ||||||||||||||||||||||| |||||||||||||| |||||||||
Sbjct 1561 ATCCTCAATCTGGACTGTGATCACTACATCTACAACTCCAAAGCTATCAAAGAAGGAATG 1620
Query 1621 TGTTTCATGATGGACCGAGGCGGTGACAGGATCTGTTACATTCAATTTCCACAACGATTC 1680
|||||||||||||||||||| ||||||||||||||||| ||||| ||||||||||| |||
Sbjct 1621 TGTTTCATGATGGACCGAGGTGGTGACAGGATCTGTTATATTCAGTTTCCACAACGGTTC 1680
Query 1681 GAAGGAATCGACCCATCTGATCGATATGCAAATCACAATACCGTCTTCTTCGACGGTAAC 1740
||||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||||
Sbjct 1681 GAAGGAATCGACCCATCAGATCGATATGCAAATCACAATACTGTCTTCTTCGATGGTAAC 1740
Query 1741 ATGAGAGCGCTAGATGGGTTACAAGGTCCTGTCTATGTCGGAACAGGGTGTATGTTCCGA 1800
|||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1741 ATGAGAGCATTAGATGGGTTACAAGGTCCTGTCTATGTTGGAACAGGGTGTATGTTCCGA 1800
Query 1801 AGGTATGCTCTCTATGGATTCAACCCACCTCGAGCCAATGAGTACTCAGGCGTGTTCGGT 1860
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1801 AGGTATGCTCTCTATGGATTCAACCCACCTCGAGCCAATGAGTACTCAGGCGTGTTTGGT 1860
Query 1861 CAGGAAAAGGCTCCAGCCATGCATGTCCGGACTCAGTCCCAAGCATCCCAAACGTCCCAA 1920
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1861 CAGGAAAAGGCTCCAGCTATGCATGTCCGGACTCAGTCCCAAGCATCCCAAACGTCCCAA 1920
Query 1921 GCGTCTGATTTAGAGTCTGATACACAGCCTCTTAATGATGATCCAGATCTTGGTTTGCCT 1980
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1921 GCGTCTGATTTAGAGTCTGATACACAGCCTCTTAATGATGATCCAGATCTTGGTCTGCCC 1980
Query 1981 AAAAAGTTTGGTAATTCGACCATGTTCACAGACACTATTCCGGTTGCAGAGTACCAAGGA 2040
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1981 AAAAAGTTTGGTAATTCGACCATGTTCACAGACACTATTCCAGTTGCAGAGTACCAAGGA 2040
Query 2041 CGGCCTCTAGCAGATCACATGTCGGTTAAAAACGGAAGACCACCCGGTGCTTTGCTCCTG 2100
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 2041 CGGCCTCTAGCAGATCACATGTCGGTTAAAAACGGAAGACCACCTGGTGCTTTGCTCCTG 2100
Query 2101 CCACGGCCTCCCCTTGACGCTCCAACAGTGGCTGAAGCCATAGCTGTCATTTCTTGCTGG 2160
||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||
Sbjct 2101 CCACGACCTCCCCTTGATGCTCCAACAGTGGCTGAAGCCATCGCTGTCATTTCTTGCTGG 2160
Query 2161 TATGAAGACAATACCGAATGGGGAGATAGAATCGGATGGATTTACGGGTCGGTCACTGAA 2220
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 2161 TATGAAGACAATACTGAATGGGGAGATAGAATCGGATGGATTTACGGGTCGGTCACGGAA 2220
Query 2221 GACGTGGTGACAGGTTATCGTATGCATAACCGTGGTTGGCGGTCCATTTACTGCATCACA 2280
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 2221 GACGTGGTGACAGGTTATCGTATGCATAACCGTGGTTGGCGGTCCGTTTACTGCATCACA 2280
Query 2281 AAACGCGATGCTTTCCGTGGCACAGCTCCAATCAATCTCACTGACCGTCTCCATCAAGTT 2340
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2281 AAACGTGATGCTTTCCGTGGCACAGCTCCAATCAATCTCACTGACCGTCTCCATCAAGTT 2340
Query 2341 CTCCGTTGGGCCACAGGCTCTGTAGAAATCTTCTTCTCTAAGAACAACGCCATGTTCGCG 2400
|||||||||||||||||||||||||||||||| ||||| |||||||| |||||||||||
Sbjct 2341 CTCCGTTGGGCCACAGGCTCTGTAGAAATCTTTTTCTCCAAGAACAATGCCATGTTCGCC 2400
Query 2401 ACCAGAAGGCTCAAGTTTCTCCAGCGAGTCGCCTACCTCAACGTCGGGATCTACCCTTTT 2460
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 2401 ACCAGAAGGCTCAAGTTTCTCCAGCGAGTCGCCTACCTCAATGTCGGGATCTACCCTTTC 2460
Query 2461 ACCTCCATCTTCTTGGTCGTCTATTGCTTCCTCCCTGCTCTCTGTCTCTTCAGCGGAAAA 2520
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2461 ACTTCCATCTTCTTGGTCGTCTATTGCTTCCTCCCTGCTCTCTGTCTCTTCAGCGGAAAA 2520
Query 2521 TTCATCGTACAGAGCCTCGATATCCACTTTCTCTCCTACCTTCTCTGCATCACCGTAACC 2580
|||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 2521 TTCATCGTCCAGAGCCTCGATATCCACTTCCTCTCCTACCTTCTCTGCATCACCGTAACC 2580
Query 2581 CTAACCTTAATCTCACTCCTGGAGGTCAAATGGTCGGGAATCGGACTGGAAGAATGGTGG 2640
|||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 2581 CTAACCCTAATCTCACTCCTCGAGGTCAAATGGTCGGGAATCGGACTGGAAGAATGGTGG 2640
Query 2641 AGAAATGAACAGTTTTGGTTAATAGGAGGCACAAGCGCTCATCTCGCAGCAGTCGTTCAA 2700
||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||
Sbjct 2641 AGAAATGAACAGTTTTGGTTAATCGGAGGCACAAGCGCTCATCTTGCAGCAGTCGTTCAA 2700
Query 2701 GGTTTGCTCAAAGTAATAGCCGGAATCGAAATCTCCTTCACCCTGACATCGAAATCCTCA 2760
|||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 2701 GGTTTGCTCAAAGTTATAGCCGGAATCGAAATCTCCTTCACCCTGACATCGAAAGCCTCA 2760
Query 2761 GGAGAAGACGAAGATGACATCTTCGCTGATCTTTACATAGTAAAATGGACGGGCTTATTC 2820
|||||||||||||| |||||||| || ||||||||||| || |||||||| |||||||||
Sbjct 2761 GGAGAAGACGAAGACGACATCTTTGCGGATCTTTACATTGTGAAATGGACAGGCTTATTC 2820
Query 2821 ATCATGCCGCTTACAATCATTGTAGTGAACCTTGTTGCGATAGTGATTGGAGCTTCCAGG 2880
|||||||||||||||||||| |||| ||||||||||||||||||||||||||||| ||
Sbjct 2821 ATCATGCCGCTTACAATCATCATAGTCAACCTTGTTGCGATAGTGATTGGAGCTTCGAGA 2880
Query 2881 ACAATATACAGTGTGATTCCGCAATGGGGCAAGTTACTAGGAGGAATATTCTTTAGTTTA 2940
|||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||
Sbjct 2881 ACAATATACAGTGTGATTCCGCAATGGGGCAAGTTAATGGGAGGAATATTCTTTAGTTTA 2940
Query 2941 TGGGTCTTGACTCATATGTATCCGTTTGCTAAAGGATTGATGGGTCGAAGAGGAAAGGTT 3000
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2941 TGGGTCTTGACTCATATGTATCCGTTTGCTAAAGGATTGATGGGTCGAAGAGGAAAGGTT 3000
Query 3001 CCAACAATTGTTTATGTTTGGTCCGGGCTTGTGTCGATTACCGTGTCGCTGCTTTGGATC 3060
||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 3001 CCAACGATTGTTTATGTTTGGTCCGGGCTTGTGTCGATTACCGTCTCGCTGCTTTGGATC 3060
Query 3061 ACCATTAGTCCTCCAGATGATGTTTCAGGCAGTGGAGGAATCTCAGTGTAAATTTGGATC 3120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3061 ACCATTAGTCCTCCAGATGATGTTTCAGGCAGTGGAGGAATCTCAGTGTAAATTTGGATC 3120
Query 3121 AGAATGTAAAAACTGAGTGGATTTTT--CTCtttttttttttttttGTAAAAGTAATTTT 3178
||||||||||||||||| | |||||| |||| ||||||||| |||||||||||||||||
Sbjct 3121 AGAATGTAAAAACTGAG-G-ATTTTTAACTCTATTTTTTTTTGTTTGTAAAAGTAATTTT 3178
Query 3179 GGTTTATGTAAATTTATGTTGAAACAGACCAATTATTGCTTTCCTTCGTGTTAGCTTTTG 3238
|||||||||||||||||||||||||||||||||| ||||| | |||||||||||||||||
Sbjct 3179 GGTTTATGTAAATTTATGTTGAAACAGACCAATTCTTGCTGTACTTCGTGTTAGCTTTTG 3238
Query 3239 AGACTTACCGTTGTTACATGGAACTGAAACAAACAGttttttt 3281
| || |||||||||||||||||| ||||||||||||||||||
Sbjct 3239 ATACACACCGTTGTTACATGGAACAGAAACAAACAGTTTTTTT 3281
> AT3G03050.1 | Symbols: CSLD3, KJK, ATCSLD3 | cellulose synthase-like
D3 | chr3:687052-691898 FORWARD LENGTH=4206
Length=4206
Score = 459 bits (248), Expect = 1e-127
Identities = 811/1079 (75%), Gaps = 54/1079 (5%)
Strand=Plus/Plus
Query 2020 CCGGTTGCAGAGTACCAAGGACGGCCTCTAGCAGATCA--CATGTCGGTTAAAAACGGAA 2077
|||||||| |||| |||||| || ||||| || ||||| || | | || ||||||||
Sbjct 2840 CCGGTTGCCGAGTTCCAAGGTCGTCCTCTTGCGGATCACCCA-G-CTGTGCAAAACGGAC 2897
Query 2078 GACCACCCGGTGCTTTGCTCC-TGCCACGGC-CTCCCCTTGACGC-TCCAACAGTGGCTG 2134
|||||||||| ||| | | || | || | || | ||||| || | |||| ||||| |
Sbjct 2898 GACCACCCGGAGCTCT-CACCATTCCTC-GCGAGCTTCTTGATGCAT-CAACTGTGGCAG 2954
Query 2135 AAGCCATAGCTGTCATTTCTTGCTGGTATGAAGACAATACCGAATGGGGAGATAGAATCG 2194
|||||||||| ||||| ||||| ||||| || || || ||||| |||||| | | ||||
Sbjct 2955 AAGCCATAGCCGTCATCTCTTGTTGGTACGAGGATAAAACCGAGTGGGGATCTCGGATCG 3014
Query 2195 GATGGATTTACGGGTCGGTCACTGAAGACGTGGTGACAGGTTATCGTATGCATAACCGTG 2254
| |||||||| || || ||||| ||||| ||||| ||||||||| | ||||||||||| |
Sbjct 3015 GTTGGATTTATGGATCTGTCACGGAAGATGTGGTCACAGGTTATAGAATGCATAACCGAG 3074
Query 2255 GTTGGCGGTCCATTTACTGCATCA-CAAAACGCGATGCTTTCCGTGGCACAGCTCCAATC 2313
| ||| || ||||||| | | ||||| | |||||||||||||||||||||||||||
Sbjct 3075 GCTGGAAATCGGTTTACTGTGTGACCAAAA-GGGATGCTTTCCGTGGCACAGCTCCAATC 3133
Query 2314 AATCTC-ACTGACCGTCTCCATCAAGTTCTCCGTTGGGCCACAGGCTCTGTAGAAATCTT 2372
|| || || || | || || || |||||||| ||||| || ||||| ||||| |||||
Sbjct 3134 AA-CTTGACGGATAGGCTTCACCAGGTTCTCCGATGGGCTACTGGCTCGGTAGAGATCTT 3192
Query 2373 CTTCTCTAAGAA-CAACGCCATGTTCGCGA-CCAGAAGGCTCAAGTTTCTCCAGCGAGTC 2430
|||||| ||||| ||| ||| | || || | || || | | || | |||||| || ||
Sbjct 3193 CTTCTC-AAGAAACAATGCCTTCTTTGCTAGCCCGA-GAATGAAAATCCTCCAGAGAATC 3250
Query 2431 GCCTACCTCAACGTCGGGATCTACCCTTTTACCTCCAT-CTTCTTGGTCGTCTATTGCTT 2489
|| ||||| ||||| || |||||||| || || || || |||| | | ||||| |||||
Sbjct 3251 GCTTACCTAAACGTTGGAATCTACCCGTTCACATC-ATTCTTCCTCATAGTCTACTGCTT 3309
Query 2490 CCTCCCTGCTCTCTGTCTCTTCAGC-GGAAAATTCATCGTACAGAGC-CTCGATATCCAC 2547
|||||| ||||||| || ||| | || | ||||| || || | | ||| || || ||
Sbjct 3310 CCTCCCAGCTCTCTCCCTATTCT-CAGGCCAGTTCATAGTCCAAA-CACTCAATGTC-AC 3366
Query 2548 TTTC-TC-TCCTACCTTCTC--TGCATCACCGTAACCCTAACCTTAATCTCACTCCTGGA 2603
||| | || ||||| || | |||| || | || || |||| || | ||||| ||
Sbjct 3367 ATTCCTTGTC-TACCT-CTTAAT-CATCTCCATTACGCTCTGCTTACTCGCTCTCCTCGA 3423
Query 2604 GGTCAAATGGTCGGGAATCGGACTGGAAGAATGGTGGAGAAATGAACAGTTTTGGTTAAT 2663
| |||||||||| |||||| ||| || ||||||||| |||| || ||||| ||| | ||
Sbjct 3424 GATCAAATGGTCAGGAATCTCACTCGAGGAATGGTGGCGAAACGAGCAGTTCTGGCTCAT 3483
Query 2664 AGGAGGCACAAGCGCTCATCTC-GCAGCAGTCGTTCAAGGTTTGCTCAAAGTAATAGCCG 2722
||||| ||||||||||| || || || || | ||||| |||||||||| | ||||
Sbjct 3484 TGGAGGAACAAGCGCTCA-CTTAGCCGCGGTTATCCAAGGGCTGCTCAAAGTTGTTGCCG 3542
Query 2723 GAATCGAAATCTCCTTCACCCTGACATCGAAATCCTCAGGAGAAGACGAAGATGAC-A-T 2780
||||||||||||| ||||| ||||||| |||||| |||||| || | ||| ||| | |
Sbjct 3543 GAATCGAAATCTCATTCACATTGACATCTAAATCCGGAGGAGAGGATGTAGACGACGAAT 3602
Query 2781 CTTCGCTGATCTTTACATAGTAAAATGGACGGGCTT-ATTCATCATGCCGCTTACAATCA 2839
|| || ||||| ||||| || |||||||| | | || ||| || | |||||||
Sbjct 3603 -TT-GCGGATCTCTACATTGTGAAATGGACATCCCTCATG-ATCCCACCAATCACAATCA 3659
Query 2840 TTG-TAGTGAACCTTGTTGCGATAGTGATTGGAGCTTC-CAGGACAATATACAGTGTGAT 2897
| | | |||||||| | || || | | | || | || |||||| ||||||||||||||
Sbjct 3660 T-GATGGTGAACCTAATCGCCATCGCGGTCGG-GTTTAGCAGGACGATATACAGTGTGAT 3717
Query 2898 TCCGCAATGGGGCAAGTT-ACTAGGAGGAATATTCTTTAGTTTATGGGT-CTTGACTCAT 2955
|||||| ||| | ||||| | | |||||| | ||||| ||||| ||||| || | |||||
Sbjct 3718 TCCGCAGTGGAGTAAGTTGATT-GGAGGAGTGTTCTTCAGTTTCTGGGTACTGG-CTCAT 3775
Query 2956 ATGTATCCGTTTGCTAAAGGA-TTGATGGGTCGAAGAGGAAAGGT-TCCAACAATTGTTT 3013
| ||||| || |||||||| || ||||| ||||||||| || ||| || ||||| |
Sbjct 3776 CTTTATCCATTCGCTAAAGGGCTT-ATGGGAAGAAGAGGAA-GGACTCCGACCATTGTAT 3833
Query 3014 ATGTTTGGTCCGGGCTTGT-GTCGATTACCGTGTCGCTGCTTTGGATCACCATTAGTCC 3071
|||| ||||| || ||||| | | || ||| | || ||||||||| | |||||| |||
Sbjct 3834 ATGTCTGGTCTGGACTTGTTGCC-ATCACCATATCTCTGCTTTGGGTTGCCATTAATCC 3891
> AT1G02730.1 | Symbols: ATCSLD5, CSLD5, SOS6 | cellulose synthase-like
D5 | chr1:594573-598657 REVERSE LENGTH=3854
Length=3854
Score = 291 bits (157), Expect = 4e-77
Identities = 710/967 (73%), Gaps = 77/967 (8%)
Strand=Plus/Plus
Query 2131 GCTGAAGCCAT-AGCTGTCATTTCTTGCTGGTATGAAGACAATACCGAATGGGG-AGATA 2188
|||||||| || || ||| || ||||||| ||||| ||||| || |||||||| | | |
Sbjct 2744 GCTGAAGCAATCAG-TGTGATATCTTGCTTCTATGAGGACAAAACTGAATGGGGTA-AAA 2801
Query 2189 GAATCGGATGGATTTACGGGTCGGTCACTGAAGACGTGGTGACAGGTTATCGTATGCATA 2248
|| | |||||||| || || || || |||||||| || || || || ||||| ||||| |
Sbjct 2802 GAGTTGGATGGATCTATGGATCAGTGACTGAAGATGTAGTCACGGGATATCGAATGCACA 2861
Query 2249 ACCGTGGTTGGCGGTCCATTTACTGCATCACAAAACGCGATGCTTTCCGTGGCACAGCTC 2308
|| | || ||| | || || |||||| | |||||| | || ||||||||||| |||||||
Sbjct 2862 ACAGAGGATGGAGATCAATCTACTGCGTGACAAAAAGAGACGCTTTCCGTGGAACAGCTC 2921
Query 2309 CAATCAATCTCACTGACCGTCTCCATCAAGTTCTCCGTTGGGCCACAGGCTCTGTAGAAA 2368
| |||||||| || || | || || || ||||| | ||||| ||||| ||||| || |
Sbjct 2922 CGATCAATCTAACGGATAGACTTCACCAGGTTCTGAGATGGGCAACAGGATCTGTTGAGA 2981
Query 2369 TCTTCTTCTCTAA-GAACAACGCCATGTTCGCGACCAGAAGGCTCAAGTTTCTCCAGCGA 2427
|||||||||| || |||||| || || || || ||||||||| | |||||| | ||| ||
Sbjct 2982 TCTTCTTCTC-AAGGAACAATGCAATTTTTGCAACCAGAAGGATGAAGTTTTTGCAGAGA 3040
Query 2428 GTCGCCTACCTCAACGTCGGGATCTACCCTTTTACCTC-CATCTTCTTGGTCGTCTATTG 2486
|| || ||| ||||||| || || || || || || || | | ||| | ||||||| ||
Sbjct 3041 GTGGCTTACTTCAACGTTGGAATGTATCCATTCACATCGC-TATTCCTCATCGTCTACTG 3099
Query 2487 C-TTCCTCCCTGC--TCTCTGTCTCTTCAGC-GGAAAATTCATCGTACAGAGC-CTCGAT 2541
| || |||||||| | || | |||||| | || ||||||| || || | | |||||
Sbjct 3100 CATT-CTCCCTGCGATTTC-G-CTCTTC-TCGGGTCAATTCATAGTCCA-ATCACTCGAC 3154
Query 2542 ATCCACTTTC-T-CTCCTACCTTCTCTGC-ATCAC-CGTAACCCTAACCT-TAAT-C--T 2593
|| || ||| | | ||| || |||| | || || | | || || || | || | |
Sbjct 3155 AT-AACGTTCTTGAT-CTATCTCCTCT-CGATAACAC-TCACGCT---CTGT-ATGCTAT 3206
Query 2594 CACTCCTGGAGGTCAAATGGTCGGGAATCGGACTGGAAGAATGGTGGAGAAATGAACAGT 2653
||||||| ||| |||||||||| || || || | |||||||||||||| || ||||
Sbjct 3207 CACTCCTTGAGATCAAATGGTCAGGCATAACTCTCCATGAATGGTGGAGAAACGAGCAGT 3266
Query 2654 TTTGGTTAATAGGAGGCACAAGCGCTCATCTC-GCAGCAG-TCGTTCAAGGT-TTGCTCA 2710
| ||| | |||||||| |||||||| || | | ||||| | || |||| ||| || || |
Sbjct 3267 TCTGGGTCATAGGAGGTACAAGCGCACA-CCCTGCAGCTGTTC-TTCAGGGTCTT-CTTA 3323
Query 2711 AAGTAATAGCCGGAATCGAAATCTCCTTCACCCTGACATCGAAATC--CT-CAGGAGAAG 2767
| ||||| || ||| | || ||||| || ||| |||| || || || || || |||||
Sbjct 3324 AGGTAATTGCAGGAGTTGATATCTCATTTACCTTGACTTCCAAGTCATCTGCACCAGAAG 3383
Query 2768 A-CGA-A-GATGACATCTTCGCTGATCTTTACATAGTAAAATGGACGGGCTTATTCATCA 2824
| || | ||||| | || || ||||| || | || ||||||| |||| || ||
Sbjct 3384 ATGGAGACGATGA-GT-TT-GCGGATCTGTATGTTGTGAAATGGA---GCTTTTTGATGG 3437
Query 2825 TGCC-GC-TT-ACAATCATTG-TAGTGAACCT-TG-TTGCGATAGTGATTGGAGCT-TCC 2877
| || | || || |||| || | ||||| | || |||| || | | ||| ||| |
Sbjct 3438 TTCCTCCATTAACTATCA-TGATGGTGAA--TATGATTGCAATTGCG-GTGGGGCTAGCG 3493
Query 2878 AGGACAATATACAGTGTGATTCCGCAATGGGGCAAG-TTACTAGGAGGAATATTCTTTAG 2936
||||| | |||||| | |||| || ||| | ||| || | |||||| | ||||| ||
Sbjct 3494 AGGACTCTGTACAGTCCGTTTCCACAGTGGAGTAAGCTT-GTTGGAGGAGTGTTCTTCAG 3552
Query 2937 -TTTATGGGT-C-TTGACTCATATGTATCCGTTTGCTAAAGGATTGATGGGTCGAAGAGG 2993
||| ||||| | ||| |||| |||||||||||||||||||||||||||| |||||||
Sbjct 3553 CTTT-TGGGTGCTTTG--TCATCTGTATCCGTTTGCTAAAGGATTGATGGGAAGAAGAGG 3609
Query 2994 AA-AGGTTCCAACAATTGT-TTATGTTTGGTCCGGGCTTGT-GTCGATTACCGTGTCGCT 3050
| || |||| || || || || ||| ||||| || |||| |||||||| |||||| |
Sbjct 3610 CAGAG-TTCCGACCATAGTGTT-TGTGTGGTCAGGT-TTGTTGTCGATTATTGTGTCGTT 3666
Query 3051 GCTTTGG 3057
|||||||
Sbjct 3667 GCTTTGG 3673
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 163293399465
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5