BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg482251
Length=1769
Score E
Sequences producing significant alignments: (Bits) Value
AT2G33150.1 | Symbols: PKT3, PED1, KAT2 | peroxisomal 3-ketoacy... 2889 0.0
AT1G04710.1 | Symbols: KAT1, PKT4 | peroxisomal 3-ketoacyl-CoA ... 1269 0.0
AT5G48880.2 | Symbols: PKT2, KAT5 | peroxisomal 3-keto-acyl-CoA... 416 3e-115
> AT2G33150.1 | Symbols: PKT3, PED1, KAT2 | peroxisomal 3-ketoacyl-CoA
thiolase 3 | chr2:14047478-14051140 REVERSE LENGTH=1882
Length=1882
Score = 2889 bits (1564), Expect = 0.0
Identities = 1707/1775 (96%), Gaps = 14/1775 (1%)
Strand=Plus/Plus
Query 1 TTTGGGATAATTATTTTCCAAGAACGGGCAAAGCGGTGAGTCATCTTTCCTTATAAATGA 60
|||||||| || |||| || |||||||||||||||||||||||||| ||||||||||||
Sbjct 3 TTTGGGATTATCATTTACCCGGAACGGGCAAAGCGGTGAGTCATCTTACCTTATAAATGA 62
Query 61 TCACAACCCCGAGGACTCTGAG-TTTCGTGTAGAACAAATCCTTCTCTGAG--AAAACAA 117
|||||| |||||||||| |||| |||||||||||||||||||||||||||| |||||||
Sbjct 63 TCACAAACCCGAGGACTGTGAGTTTTCGTGTAGAACAAATCCTTCTCTGAGAAAAAACAA 122
Query 118 CAGATCGGGATTTTATC-TTAATCAACCGGAAAAAATGGAGAAAGCGATCGAGAGACAAC 176
|||||| | |||||||| ||||||| ||||||||||||||||||||||||||||||||||
Sbjct 123 CAGATCCGAATTTTATCTTTAATCAGCCGGAAAAAATGGAGAAAGCGATCGAGAGACAAC 182
Query 177 GCGTTCTTCTTGAACATCTCCGACCTTCTTCTTCTTCTTCGCACAATTTCGAGGCTTCTC 236
||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 183 GCGTTCTTCTTGAGCATCTCCGACCTTCTTCTTCTTCTTCGCACAATTACGAGGCTTCTC 242
Query 237 TATCCGCTTCTGCTTGCTTGGCTGGGGACAGTGCTGCTTATCAGAGGACCTCTCTATATG 296
|||| |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||
Sbjct 243 TATCTGCTTCTGCTTGCTTGGCTGGGGACAGTGCTGCATATCAGAGGACCTCTCTCTATG 302
Query 297 GAGATGATGTTGTGATTGTCGCGGCACATAGGACTCCACTATGCAAGTCTAAACGTGGCA 356
||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 303 GAGATGATGTTGTCATTGTCGCGGCACATAGGACTCCACTATGCAAGTCCAAACGTGGCA 362
Query 357 ACTTCAAGGATACATATCCTGATGATTTGCTCGCACCTGTTTTGAGGGCATTGATAGAGA 416
| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 363 ATTTCAAGGATACATATCCCGATGATTTGCTCGCACCTGTTTTGAGGGCATTGATAGAGA 422
Query 417 AGACAAATCTAAACCCAAGTGAAGTAGGGGACATTGTTGTGGGTACTGTTTTGGCACCTG 476
|||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 423 AGACGAATCTAAACCCAAGTGAAGTAGGTGACATTGTTGTGGGTACTGTTTTGGCACCTG 482
Query 477 GATCTCAGAGAGCCAGTGAATGCAGGATGTCTGCGTTCTATGCTGGTTTCCCTGAAACCG 536
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 483 GATCTCAGAGAGCCAGTGAATGCAGGATGGCTGCGTTCTATGCTGGTTTCCCTGAAACCG 542
Query 537 TGGCTGTCAGAACTGTGAATAGACAGTGCTCATCTGGGCTTCAGGCTGTTGCTGACGTAG 596
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 543 TGGCTGTCAGAACTGTGAATAGACAGTGCTCATCTGGGCTTCAGGCTGTTGCTGATGTAG 602
Query 597 CCGCTGCCATTAAAGCTGGATTTTATGACATTGGTATCGGGGCTGGGTTGGAGTCCATGA 656
|||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||
Sbjct 603 CCGCTGCCATTAAAGCGGGATTTTATGACATTGGTATCGGGGCTGGTTTGGAGTCCATGA 662
Query 657 CTACCAATCCAATGGCGTGGGAAGGGTCAGTCAACCCAGCGGTGAAGCAGTTTGTACAAG 716
|||||||||||||||| |||||||||||||||||||||||||||||| |||||| |||||
Sbjct 663 CTACCAATCCAATGGCATGGGAAGGGTCAGTCAACCCAGCGGTGAAGAAGTTTGCACAAG 722
Query 717 CACAGAATTGTCTTCTTCCTATGGGTGTTACTTCAGAAAATGTAGCACAACGCTTTGGTG 776
| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 723 CGCAGAATTGTCTTCTTCCTATGGGTGTTACGTCAGAAAATGTAGCACAACGCTTTGGTG 782
Query 777 TCTCAAGGCAGGAGCAAGATCAAGCTGCTGTTGACTCGCACAGAAAGGCAGCTGCTGCTA 836
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 783 TCTCAAGGCAGGAGCAAGATCAAGCTGCTGTTGACTCGCACAGAAAGGCAGCTGCTGCTA 842
Query 837 CTGCTGCTGGTAAATTCAAGGATGAGATCATTCCTGTTAAGACCAAGCTTGTTGACCCAA 896
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 843 CTGCTGCTGGTAAATTCAAGGATGAGATCATTCCTGTTAAGACCAAGCTTGTTGACCCGA 902
Query 897 AGACTGGTGATGAGAAACCCATTACAGTTTCTGTTGATGATGGTATCCGACCAACCACAA 956
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 903 AGACTGGTGATGAGAAACCCATTACAGTTTCTGTTGATGATGGTATCCGACCAACCACAA 962
Query 957 CTCTTGCTTCTCTTGGGAAGCTGAAGCCAGTGTTTAAGAAGGATGGCACCACAACTGCTG 1016
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 963 CTCTTGCTTCTCTTGGGAAGCTGAAGCCAGTGTTTAAGAAGGATGGCACCACTACTGCTG 1022
Query 1017 GAAATTCGAGCCAAGTAAGTGATGGTGCAGGAGCTGTTCTCCTCATGAAGAGAAGTGTTG 1076
||||||| |||||||||||||||||||||||||| |||||||| ||||||||||||||||
Sbjct 1023 GAAATTCCAGCCAAGTAAGTGATGGTGCAGGAGCGGTTCTCCTAATGAAGAGAAGTGTTG 1082
Query 1077 CAATGCAAAAAGGACTTCCTGTTCTTGGTGTATTCAGGACATTTGCTGCAGTTGGTGTTG 1136
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1083 CAATGCAAAAAGGACTTCCCGTTCTTGGTGTATTCAGGACATTTGCTGCAGTTGGTGTTG 1142
Query 1137 ACCCTGCAATCATGGGTATTGGTCCAGCAGTTGCCATTCCTGCTGCAGTTAAGGCAGCTG 1196
||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||
Sbjct 1143 ACCCTGCAATCATGGGTATCGGTCCAGCAGTTGCCATTCCTGCTGCAGTTAAGGCGGCTG 1202
Query 1197 GTTTAGAACTTGATGACATTGACTTGTTTGAGATCAATGAGGCATTTGCATCTCAGTTTG 1256
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1203 GTTTAGAACTTGATGACATCGACTTGTTTGAGATCAATGAGGCATTTGCATCTCAGTTTG 1262
Query 1257 TTTATTGCCGTAACAAATTGGGACTTGACCCAGAGAAAATCAATGTCAACGGAGGCGCAA 1316
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1263 TTTATTGCCGTAACAAATTGGGACTTGACCCAGAGAAAATCAATGTCAACGGAGGTGCAA 1322
Query 1317 TGGCCATAGGCCATCCTTTGGGCGCTACAGGAGCGCGTTGTGTTGCTACATTGTTGCACG 1376
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1323 TGGCCATAGGCCATCCTTTGGGCGCTACAGGAGCGCGTTGTGTTGCTACATTGTTGCACG 1382
Query 1377 AGATGAAACGCCGTGGAAAAGACTGCCGTTTTGGAGTAGTGTCAATGTGCATTGGGACGG 1436
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1383 AGATGAAACGCCGTGGTAAAGACTGCCGTTTTGGAGTAGTGTCAATGTGCATTGGGACGG 1442
Query 1437 GGATGGGTGCAGCAGCTGTGTTTGAGAGAGGAGATGGAGTTGATGAGCTTCGCAACGCAA 1496
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1443 GGATGGGTGCAGCAGCTGTGTTTGAGAGAGGAGATGGAGTTGATGAGCTTCGCAACGCAA 1502
Query 1497 GGAAAGTTGAAGCGCAAGGTCTTTTGTCCAAGGACGCTCGCTAGATATCACCATGCACCA 1556
||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||
Sbjct 1503 GGAAAGTTGAAGCGCAAGGTCTTTTGTCCAAGGACGCTCGCTAGAGAGGACCATGCACCA 1562
Query 1557 AAACccttcttcacctcacctctcacctctctcttctggtcctcttttccctttcttcaG 1616
||||| || ||||||||||||||| ||| | |||||||| |||| || ||||||||||
Sbjct 1563 AAACCGTTTTTCACCTCACCTCTC---TCT-T-TTCTGGTCTTCTTGTCACTTTCTTCAG 1617
Query 1617 ATATTATTATAGTTTTGAATAAAGCACACAACCAATGTTTGCCTGAGTCGTGTGTTCTTC 1676
||||||||||||||| ||||||||||||||||||||||||||||||||| |||||| |||
Sbjct 1618 ATATTATTATAGTTTCGAATAAAGCACACAACCAATGTTTGCCTGAGTCTTGTGTTGTTC 1677
Query 1677 TTGACCAGGTCATGTGTTTAGTATTTTTT--ACGTGAAGGGGGATAATCTTTAAATCTTT 1734
||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||
Sbjct 1678 TTGACCAGGTCATGTGTTTAGTATTTTTTTTAAGTGAAGGGGGATAATCTTTAAATCTTT 1737
Query 1735 TATTATATGTAAGAATATTGTTCTTCTCGAATTTC 1769
||| || |||||||||||||||||||||||||||
Sbjct 1738 TAT-AT--GTAAGAATATTGTTCTTCTCGAATTTC 1769
> AT1G04710.1 | Symbols: KAT1, PKT4 | peroxisomal 3-ketoacyl-CoA
thiolase 4 | chr1:1321904-1324782 FORWARD LENGTH=1595
Length=1595
Score = 1269 bits (687), Expect = 0.0
Identities = 1033/1202 (86%), Gaps = 16/1202 (1%)
Strand=Plus/Plus
Query 292 ATATGGAGATGATGTTGTGATTGTCGCGGCACATAGGACTCCACTATGCAAGTCTAAACG 351
|||||||||||||||||| |||||||||||||| |||||| |||| |||||| | |||||
Sbjct 154 ATATGGAGATGATGTTGTCATTGTCGCGGCACAAAGGACTGCACTTTGCAAGGCAAAACG 213
Query 352 TGGCAACTTCAAGGATACATATCCTGATGATTTGCTCGCAC-CTGTTTTGAGGGCATTGA 410
||||| |||||||||||||| ||| || || ||||| || | |||| ||||| |||||||
Sbjct 214 TGGCAGCTTCAAGGATACATTTCCAGACGAGTTGCTTGC-CTCTGTATTGAGAGCATTGA 272
Query 411 TAGAGAAGACAAATCTAAACCCAAGTGAAGTAGGGGACATTGTTGTGGGTACTGTTTTGG 470
||||||| || ||| |||||||||||||||| || |||||||| ||||||||||||||||
Sbjct 273 TAGAGAAAACTAATGTAAACCCAAGTGAAGTTGGTGACATTGTAGTGGGTACTGTTTTGG 332
Query 471 CACCTGGATCTCAGAGAGCCAGTGAATGCAGGATGTCTGCGTTCTATGCTGGTTTCCCTG 530
||| |||||||||||||||||||||||||||||| |||||||||||||||||||||| |
Sbjct 333 GACCAGGATCTCAGAGAGCCAGTGAATGCAGGATGGCTGCGTTCTATGCTGGTTTCCCCG 392
Query 531 AAACCGTGGCTGTCAGAACTGTGAATAGACAGTGCTCATCTGGGCTTCAGGCTGTTGCTG 590
|||| || | ||||||| ||||| |||||||| |||||||||||||||||||||||||
Sbjct 393 AAACTGTTCCCATCAGAACCGTGAACAGACAGTGTTCATCTGGGCTTCAGGCTGTTGCTG 452
Query 591 ACGTAGCCGCTGCCATTAAAGCTGGATTTTATGACATTGGTATCGGGGCTGGGTTGGAGT 650
| || ||||||||||| |||||||| ||||||||||||||||| || |||||| ||||||
Sbjct 453 ATGTTGCCGCTGCCATAAAAGCTGGTTTTTATGACATTGGTATTGGAGCTGGGCTGGAGT 512
Query 651 CCATGACTACCAATCCAATGGCG-TGGGAAGGGTCAGTCAACCCAGCGGTGAAGCAGTTT 709
||||||| || ||||||| || | ||| |||| |||||||||||| |||||| |||||
Sbjct 513 CCATGACAACTAATCCAAGGG-GATGGAAAGGATCAGTCAACCCAAATGTGAAGAAGTTT 571
Query 710 GTACAAGCACAGAATTGTCTTCTTCCTATGGGTGTTACTTCAGAAAATGTAGCACAACGC 769
| |||||| || ||||| |||||||| |||||| |||||||||||||||||||||| ||
Sbjct 572 GAACAAGCTCACAATTGCCTTCTTCCAATGGGTATTACTTCAGAAAATGTAGCACACCGG 631
Query 770 TTTGGTGTCTCAAGGCAGGAGCAAGATCAAGCTGCTGTTGACTCGCACAGAAAGGCAGCT 829
||| ||| |||||| ||||||| ||||||||||||||||| || ||||||||||| |||
Sbjct 632 TTTAATGTTTCAAGGGAGGAGCAGGATCAAGCTGCTGTTGATTCTCACAGAAAGGCTGCT 691
Query 830 GCTGCTACTGCTGCTGGTAAA-TTCAAGGATGAGATCATTCCTGTTAAGACCAAGCTTGT 888
||||||||||| | || ||| || ||||||||||| | ||||| || |||||| ||||
Sbjct 692 TCTGCTACTGCTTCCGG-AAAGTTTAAGGATGAGATAACCCCTGTAAAAACCAAGATTGT 750
Query 889 TGACCCAAAGACTGGTGATGAGAAACCCATTACAGTTTCTGTTGATGATGGTATCCGACC 948
|||||||||||| ||||||||||||||||| ||||||||||| |||||||| || |||||
Sbjct 751 TGACCCAAAGACAGGTGATGAGAAACCCATAACAGTTTCTGTGGATGATGGGATTCGACC 810
Query 949 -AACCACAACTCTTGCTTCTCTTGGGAAGCTGAAGCCAGTGTTTAAG-AAGGATGGCACC 1006
||| ||||| ||| | |||| ||||||||||||||||||||| ||| | || |||
Sbjct 811 TAAC-ACAACCCTTTCCGGACTTGCAAAGCTGAAGCCAGTGTTTAAGGAAG-ACGGAACC 868
Query 1007 ACAACTGCTGGAAATTCGAGCCAAGTAAGTGATGGTGCAGGAGCTGTTCTCCTCATGAAG 1066
||||||||||| ||||| |||||| ||||||| ||||| |||||||||||||| |||| |
Sbjct 869 ACAACTGCTGGGAATTCTAGCCAATTAAGTGACGGTGCTGGAGCTGTTCTCCTTATGAGG 928
Query 1067 AGAAGTGTTGCAATGCAAAAAGGACTTCCTGTTCTTGGTGTATTCAGGACATTTGCTGCA 1126
|||| ||| |||||||| ||||| ||||| ||||||||||||||||||||||| |||||
Sbjct 929 AGAAATGTCGCAATGCAGAAAGGCCTTCCCATTCTTGGTGTATTCAGGACATTTTCTGCA 988
Query 1127 GTTGGTGTTGACCCTGCAATCATGGGTATTGGTCCAGCAGTTGCCATTCCTGCTGCAGTT 1186
|||||||| ||||| || |||||||| |||| ||||| ||||||||||||||||||||
Sbjct 989 GTTGGTGTGGACCCAGCCATCATGGGGGTTGGGCCAGCCGTTGCCATTCCTGCTGCAGTC 1048
Query 1187 AAGGCAGCTGGTTTAGAACTTGATGACATTGACTTGTTTGAGATCAATGAGGCATTTGCA 1246
|||||||||||||||||||| ||||| | |||||||||||||| || ||||||||||||
Sbjct 1049 AAGGCAGCTGGTTTAGAACTCAATGACGTCGACTTGTTTGAGATTAACGAGGCATTTGCA 1108
Query 1247 TCTCAGTTTGTTTATTGCCGTAACAAATT-GGGACTTGACCCAGAGAAA-ATCAATGTCA 1304
||||||||||||||||| || ||||| | ||| || ||| | || ||| ||||||||||
Sbjct 1109 TCTCAGTTTGTTTATTGTCGGAACAAGCTCGGG-CTAGACGCGGA-AAAGATCAATGTCA 1166
Query 1305 ACGGAGGCGCAATGGCCATAGGCCATCCTTTGGGCGCTACAGGAGCGC-GTTGTGTTGCT 1363
| ||||| || || ||||| || ||||| ||||||||||||||||| | | || |||||
Sbjct 1167 ATGGAGGAGCCATAGCCATTGGACATCCCTTGGGCGCTACAGGAGC-CAGATGCGTTGCG 1225
Query 1364 ACATTGTTGCACGAGATGAAACGCCGTGGAAAAGACTGCCGTTTTGGAGTAGTGTCAATG 1423
|| || |||| ||||||||||| ||||| |||||||| |||||||| ||||||||||||
Sbjct 1226 ACGCTGCTGCATGAGATGAAACGACGTGGTAAAGACTGTCGTTTTGGCGTAGTGTCAATG 1285
Query 1424 TGCATTGGGACGGGGATGGGTGCAGCAGCTGTGTTTGAGAGAGGAGATGGAGTTGATGAG 1483
|| || || |||| ||||| ||||| ||||||||||||||||||| || || ||||||
Sbjct 1286 TGTATAGGTTCGGGAATGGGAGCAGCCGCTGTGTTTGAGAGAGGAGGCGGTGTGGATGAG 1345
Query 1484 CT 1485
||
Sbjct 1346 CT 1347
> AT5G48880.2 | Symbols: PKT2, KAT5 | peroxisomal 3-keto-acyl-CoA
thiolase 2 | chr5:19814395-19817204 REVERSE LENGTH=1738
Length=1738
Score = 416 bits (225), Expect = 3e-115
Identities = 911/1229 (74%), Gaps = 100/1229 (8%)
Strand=Plus/Plus
Query 295 TGGAGATGATGTTGTGATTGTCGCGGCACATAGGA-CTCCACTATGC-AAGTCTAAACGT 352
||||||||| |||||||||| |||||| || | | | ||| | ||| ||| | | ||||
Sbjct 324 TGGAGATGACATTGTGATTGTAGCGGCATATCGTACCGCCA-TTTGCAAAG-CGAGACGT 381
Query 353 GGCA-ACTTCAAGGATACAT-ATCCTGATGAT-TTGCTCGCACCTGTT-TTGAGGGCATT 408
|| | ||||| || || | |||||||||| || || || ||||| || | ||| |
Sbjct 382 GG-AGGTTTCAAAGACAC-TCTTCCTGATGATCTT-CTTGCTTCTGTTCTT-AAGGC--T 435
Query 409 GATAG-AG-AAG-ACAAATCTAAACCCAAGTGAAGTAGGGGACATTGTTGTGGGTACTGT 465
| ||| | ||| ||| | | | ||||||||||| || || || ||||| ||||| ||
Sbjct 436 G-TAGTGGAAAGAACATCTTTGGATCCAAGTGAAGTTGGTGATATCGTTGTTGGTACCGT 494
Query 466 TTTGGCACCTGGATCTCAGAGAGCCAGT-GAATGCAGGATGTCTGC-G-TT-CTATGCTG 521
| || ||||| |||||||||| || | || || | || || ||| | || | |||||
Sbjct 495 GATAGCGCCTGGTTCTCAGAGAG-CAATGGAGTGTA-GA-GT-TGCAGCTTATTTTGCTG 550
Query 522 GTTTCCCTGAAACCGTGGCTGTCAGAACTGTGAATAGACAGTGCTCATCTGGGCTTCAGG 581
|||| ||||| ||||| | || |||||||| |||||||| |||||||| || || || |
Sbjct 551 GTTTTCCTGACTCCGTGCCAGTTAGAACTGTCAATAGACAATGCTCATCAGGACTACAAG 610
Query 582 CTGTTGCTGACGTAGCCGCTGCCATTAAAGCTGGATT-TTATGACATTGGTATCGGGGCT 640
| |||||||| || || ||| |||||| |||||| || ||| ||||||||||| || |||
Sbjct 611 CAGTTGCTGATGTTGCTGCTTCCATTAGAGCTGG-TTATTACGACATTGGTATTGGTGCT 669
Query 641 GG-GTTGGAGTCCATGACTACCAATCCA-ATGGCGTGGGAAG-GG---TCA--G-TC-AA 690
|| | |||| || ||| | || || || || | | ||| | || ||| | || ||
Sbjct 670 GGAG-TGGAATCAATGTCAACTGAT-CATAT-TCCT-GGAGGCGGCTTTCATGGCTCTAA 725
Query 691 -CCCAGCGGTGA-AGCAGTTT-GTACAAGCACAG-AATTGTCTT-CTTCCTATGGGTGTT 745
|| || | | || | ||| | |||| | | ||||| || ||||| ||||| ||
Sbjct 726 TCCAAG-AG-CACAGGA-TTTCCCAAAAGC-CCGTGATTGT-TTGCTTCCAATGGGAATT 780
Query 746 ACTTCAGAAAATGTAGCACAACGCTTTGGTGTCTCAAG-GCAGGAGCAAGATCA-AGCTG 803
||||| ||||| || ||| || | || |||||| |||| | | ||||||||| | ||||
Sbjct 781 ACTTCTGAAAACGTTGCAGAAAGGTTCGGTGTCACAAGAG-AAGAGCAAGAT-ATGGCTG 838
Query 804 CTGTTGACTCGCACAGAAAG-GCAGCTGCTGCTACT-GCTG-CTGGTAAATTCAAGGATG 860
| || || || |||| || | || || ||||| | | || | |||||||| |||||||||
Sbjct 839 CGGTGGAGTCTCACA-AACGCGCTGCAGCTGC-AATCGC-GTCTGGTAAACTCAAGGATG 895
Query 861 AGATCATTCCTGTTAAGACCAAGCTTGTTGACCCAAAGACTGGTG-ATGAGAAACCCAT- 918
| |||||||||||| || ||| |||| ||||| ||||| | | ||||| | ||
Sbjct 896 AAATCATTCCTGTTGCTACTAAGATTGTGGACCCTGAGACTAAAGCA-GAGAAGGCAATC 954
Query 919 -TACAGTTTCTGTTGATGATGGTATCCGACC-AAC-CACAACTCTTGCTTCTCTTGG-GA 974
| | || ||||||||||| ||| | || || ||| || ||| | || | |||| |
Sbjct 955 GT-C-GTATCTGTTGATGACGGTGTACGTCCAAACTCA-AAC-ATGGCAGAT-TTGGCAA 1009
Query 975 AGCTGAAGCCAGTGTTTAAGA-AGGATGGCACCACAACTGCTGGAAATTCGAGCCAAG-T 1032
|||||||| | || ||||| | || | || |||| || ||||| ||| | || | || |
Sbjct 1010 AGCTGAAGACTGTCTTTAA-ACAGAACGGTTCCACCACAGCTGGCAATGCTAGTC-AGAT 1067
Query 1033 AAGTGATGGTGCAGGAGCTGTTCTCCTCATGAAGAGAAGTGTT-GCAATGCAA-AAAGGA 1090
||||||||||| ||||| || || || |||||||||||| || || ||| || || |||
Sbjct 1068 CAGTGATGGTGCTGGAGCAGTACTGCTAATGAAGAGAAGT-TTGGCTATG-AAGAAGGGA 1125
Query 1091 CTTCCTGTTCTTGGTGTATTCAGGACATTTGCTG-CAGTTGGTGTTG-ACCCTGCAATCA 1148
||||| ||||||| |||||||||| ||||||| | |||||| | ||| | | | |
Sbjct 1126 CTTCCCATTCTTGGAGTATTCAGGAGTTTTGCTGTTA-CTGGTGTGGAACCAT-CTGTAA 1183
Query 1149 TGGGTATTGGTCCAGCAGTTGCCATTCCTGCTGCAGTTAAGGC-AGCTGGTTTAGAACTT 1207
|||||||||||||||| ||||||||||| |||||| ||| || || || | ||| |
Sbjct 1184 TGGGTATTGGTCCAGCTGTTGCCATTCCCGCTGCAACTAA-GCTCGCAGGGCT-CAACGT 1241
Query 1208 GA-TGACATTGACT-TGTTTGAGATCAATGAGGCATTTGCATCTCAGTTTGTTTATTGCC 1265
| || ||||| | | || |||||||||||||||||||||||||||| ||| || | |
Sbjct 1242 CAGCGATATTGA-TCTATTCGAGATCAATGAGGCATTTGCATCTCAGTATGTGTACT-CT 1299
Query 1266 -GTAACAAATTGG-GACTTGACCCAGAGAAAA--TCAATGTCAACGGAGGCGCAATGGCC 1321
| || || || | | || || | ||||| ||||||| || ||||| || || ||
Sbjct 1300 TGCAAGAAGTTAGAG-CTGGATAT-G-GAAAAGGTCAATGTTAATGGAGGAGCCATTGCT 1356
Query 1322 ATAGGCCATCCTTTGGGCGCTACAGGAGCGCGTTGTGTTGCTACATTGTTGCACGAGATG 1381
|| |||||||| |||| ||||||||||| || |||||||| ||||||||||||||||||
Sbjct 1357 ATTGGCCATCCCCTGGGTGCTACAGGAGCTCGATGTGTTGCGACATTGTTGCACGAGATG 1416
Query 1382 AAACGCCGTGGAAAAGACTGCCGTTTTGGAGTAGTGTCAATGTGCATTGGGACGGGGATG 1441
|| || | |||||||| ||||| ||||||||| | ||||||||||| || || || |||
Sbjct 1417 AAGCGGAGAGGAAAAGATTGCCGCTTTGGAGTAATCTCAATGTGCATAGGCACTGGAATG 1476
Query 1442 GGTGCAGCAGCTGTGTTTGAGAGAGGAGA 1470
|| || |||||||| |||||||| |||||
Sbjct 1477 GGAGCTGCAGCTGTTTTTGAGAGGGGAGA 1505
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 87499549935
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5