BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg482252
Length=3908
Score E
Sequences producing significant alignments: (Bits) Value
AT2G33170.1 | Symbols: | Leucine-rich repeat receptor-like pro... 5568 0.0
> AT2G33170.1 | Symbols: | Leucine-rich repeat receptor-like protein
kinase family protein | chr2:14056250-14060641 REVERSE
LENGTH=4012
Length=4012
Score = 5568 bits (3015), Expect = 0.0
Identities = 3679/3986 (92%), Gaps = 100/3986 (3%)
Strand=Plus/Plus
Query 1 CACACACAGTAGAGAGAGAAGGCATGCCTTGTCGGCCATTAGAACTTCAACAAGCCAAAG 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 16 CACACACAGTAGAGAGAGAAGGCATGCCTTGTCGGCCATTAGAACTT---CAAGCCAAAG 72
Query 61 CAAAAA-CTTACTTATCCTTCTTTCCCAT-AAATCAAAATCCTTATTGGAATATACACTA 118
|||||| ||||||||||||| | | |||| ||||||||||||||||||||||||||||||
Sbjct 73 CAAAAACCTTACTTATCCTT-TCT-CCATAAAATCAAAATCCTTATTGGAATATACACTA 130
Query 119 ATTGA-t-t-ctcatcactatctctctatcttcactttttcttaccttttctagtttctc 175
||||| | | ||||||||||||||||| ||||||||||||||| ||||||||||||||||
Sbjct 131 ATTGATTCTCCTCATCACTATCTCTCTCTCTTCACTTTTTCTTTCCTTTTCTAGTTTCTC 190
Query 176 tcttttaattcttGGGATTGTGGAGC-TTAAAGTTCC---TTTTG--------G-GTTTC 222
|||||||||||||||||||||||||| |||||||||| ||||| | |||||
Sbjct 191 TCTTTTAATTCTTGGGATTGTGGAGCTTTAAAGTTCCTTTTTTTGAACCTTTTGAGTTTC 250
Query 223 TGATTCTTCTTGATTCCAGATCAAAACCATGATCTTTGTTGATTCCTA-AACAGTATC-T 280
||||||| ||||||||||||||| |||||||||||||||||||||| | ||| || | |
Sbjct 251 TGATTCTGCTTGATTCCAGATCATAACCATGATCTTTGTTGATTCC-AGAACTTTAGCTT 309
Query 281 TTTGGTTTCATTCTATCAAATCCCTG-AA---T--TTT------TC--AAGAGAAAGTTT 326
|||| ||||||||||||||||| ||| || | ||| || ||||| ||||||
Sbjct 310 TTTGATTTCATTCTATCAAATCACTGAAATTTTCATTTGAGGAATCAGAAGAGTAAGTTT 369
Query 327 TTGCGATATTCAAATTTGTCCCCAAG-TGCACAAAGTAAGAA-ATCTTA-AAGCTTTGA- 382
|||||||| || |||||||| | || |||||||| | | || || | ||| ||||
Sbjct 370 TTGCGATACTCTCATTTGTCCTC-AGCTGCACAAACT-ATAACTTCCGATAAG-ATTGAT 426
Query 383 CATTTTTTGAAATCTCTGCTTGGTGGTTTCGTCTATGGATTCACATT-G-G-T-AAGTTT 438
|| |||||| | | |||||||||||||| |||||||||||||||| | | | | | |
Sbjct 427 CA-GTTTTGACCTTTGTGCTTGGTGGTTTCTTCTATGGATTCACATTGGTGTTGAGGGAT 485
Query 439 TCTTCGTATTCGTTTGAATGAAGTTGAGAGGAACAATGGTTTGGTGGATCTCTGAGTTTA 498
| | || | |||| | |||||||||| |||||| ||||||||||| ||||||||
Sbjct 486 T-AT-ATAGT-GTTTCTCT-TTGTTGAGAGGATCAATGGGTTGGTGGATCTTTGAGTTTA 541
Query 499 AGAGAGGGTCAAAATCTATGTTTGGTGGGGTTTTGTTTCTCTTGACACTTATGGTTTGGA 558
||| || |||||||||||||||| ||||||||||||||||||||| ||| |||||||||
Sbjct 542 AGAAAGAATCAAAATCTATGTTTGTTGGGGTTTTGTTTCTCTTGACTCTTCTGGTTTGGA 601
Query 559 CTTCAGAGAGTTTAAACAGTGATGGTCAGTTTCTTTTGGAGTTGAAGAACATAGGATTTC 618
||||||||||||| || ||||||||||||||||| |||||||||||||||| ||||||||
Sbjct 602 CTTCAGAGAGTTTGAATAGTGATGGTCAGTTTCTCTTGGAGTTGAAGAACAGAGGATTTC 661
Query 619 AAGATTCGTTGAACCGTTTGCATAACTGGAACGGCACTGACGAGACGCCGTGTAATTGGA 678
||||||||||||||||||| ||||| |||||||||| |||||||||||||||||||||||
Sbjct 662 AAGATTCGTTGAACCGTTTACATAATTGGAACGGCATTGACGAGACGCCGTGTAATTGGA 721
Query 679 TAGGTGTGAATTGCAGCTCA-ATGGGCAGTAGTA--A-TAGTGATAATCTGGTGGTGACA 734
|||||||||||||||||||| | |||||||||| | |||| ||| |||||||||||||
Sbjct 722 TAGGTGTGAATTGCAGCTCACA-AGGCAGTAGTAGTAGTAGTAATAGTCTGGTGGTGACA 780
Query 735 TCTCTTGATTTGAGTTCTATGAATCTCTCTGGGATATTAAGCCCGAGCATTGGTGGTTTG 794
|||||||||||||||||||||||||||||||||||| |||| || ||||||||||||||
Sbjct 781 TCTCTTGATTTGAGTTCTATGAATCTCTCTGGGATAGTAAGTCCTAGCATTGGTGGTTTA 840
Query 795 GTTAACTTGGTCCATCTTAATCTCGCATATAACGGGTTTACCGGAGATATTCCTCGGGAG 854
|||||||||||| ||||||| ||||| || |||| ||| |||||||||||||||||||||
Sbjct 841 GTTAACTTGGTCTATCTTAACCTCGCGTACAACGCGTTAACCGGAGATATTCCTCGGGAG 900
Query 855 ATTGGAAACTGTTCTAAGCTGGAGGTTATGTTTTTGAACAATAACCAGTTTGGTGGTTCT 914
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 901 ATTGGAAACTGTTCGAAGCTGGAGGTTATGTTTTTGAACAATAACCAGTTTGGTGGTTCC 960
Query 915 ATTCCGGTTGAGATTAGGAAGTTATCGCAGTTGAGAAGTTTTAACATTTGTAATAACAAG 974
||||| || ||||| | ||||||||||||||||||||||| |||||||| |||||||||
Sbjct 961 ATTCCAGTCGAGATCAACAAGTTATCGCAGTTGAGAAGTTTCAACATTTGCAATAACAAG 1020
Query 975 CTTTCGGGTCCTTTGCCAGAAGAGATTGGTGATTTATACAACT-TGGAAGAGCTTGTGGC 1033
||||| ||||||||||||||||||||||||||||||||||| | | ||||||||||||||
Sbjct 1021 CTTTCAGGTCCTTTGCCAGAAGAGATTGGTGATTTATACAA-TCTAGAAGAGCTTGTGGC 1079
Query 1034 TTATACTAACAACTTGACCGGTCCATTGCCTCGTTCTATAGGAAATCTCAACAAGTTGAT 1093
||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1080 TTATACTAATAACTTGACCGGTCCATTGCCTCGTTCTTTAGGAAATCTCAACAAGTTGAC 1139
Query 1094 GACATTTCGAGCAGGGCAGAACGATTTCTCTGGGAATATACCTGCTGAAATCGGTAAATG 1153
|||||||||||||||||||||||||||||| |||||||||||| ||||||| ||||||||
Sbjct 1140 GACATTTCGAGCAGGGCAGAACGATTTCTCGGGGAATATACCTACTGAAATTGGTAAATG 1199
Query 1154 CCTTAACTTGACGTTGCTCGGTCTTGCGCAGAATTTCATTTCTGGAGAGCTTCCTAAGGA 1213
|||||||||| ||||||||||||||| |||||||||||||||||||||||||| |||||
Sbjct 1200 TCTTAACTTGAAGTTGCTCGGTCTTGCTCAGAATTTCATTTCTGGAGAGCTTCCCAAGGA 1259
Query 1214 AATTGGGATGCTTGTTAAACTTCAGGAGGTGATTCTGTGGCAGAACAAGTTTTCCGGGTC 1273
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1260 AATTGGGATGCTTGTTAAACTTCAGGAGGTGATTCTGTGGCAGAACAAGTTTTCAGGGTT 1319
Query 1274 AATTCCGAAAGAGATTGGGAATTTAGCACGTCTCGAGACT-TTGGCTTTATACGGTAACT 1332
||||||||||| |||||||||||| || |||| |||||| || ||||| ||||||||||
Sbjct 1320 TATTCCGAAAGATATTGGGAATTTAACAAGTCTTGAGACTCTT-GCTTTGTACGGTAACT 1378
Query 1333 CATTGGTTGGACCGATACCATCAGAGATTGGTAACATGAAGTCCTTGAAGAAGCTCTATC 1392
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1379 CATTGGTTGGACCTATACCATCAGAGATTGGTAACATGAAGTCCTTGAAGAAGCTCTATC 1438
Query 1393 TTTACCAAAACCAGTTGAATGGGACAATCCCAAAGGAGCTTGGAAAGCTTTCCAAAGTAA 1452
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1439 TTTACCAAAACCAGTTGAATGGGACTATCCCAAAGGAGCTTGGAAAGCTTTCCAAAGTAA 1498
Query 1453 TGGAAATCGATTTCTCGGAGAATTTGTTGAGTGGTGAGATTCCGGTTGAGCTAAGCAAGA 1512
|||||||||||||||||||||||||||||||||| |||||||| |||||||| |||||||
Sbjct 1499 TGGAAATCGATTTCTCGGAGAATTTGTTGAGTGGGGAGATTCCAGTTGAGCTGAGCAAGA 1558
Query 1513 TCAGTGAGTTGAGGCTATTGTATTTGTTTCAGAACAAGTTAACTGGAATCATACCAAATG 1572
|||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct 1559 TCAGTGAGTTGAGGCTGCTCTATTTGTTTCAGAACAAGTTAACTGGAATCATACCAAATG 1618
Query 1573 AGCTCAGTAGGTTGAGGAATTTGGCGAAACTCGATCTCTCCATCAATTCCTTAACCGGTC 1632
||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1619 AGCTCAGTAAGTTGAGGAATTTGGCGAAACTCGATCTCTCCATCAACTCCTTAACCGGTC 1678
Query 1633 CTATTCCACCGGGTTTCCAGAATCTTACGTCTATGCGCCAACTTCAGCTTTTCCACAATT 1692
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1679 CTATTCCACCGGGTTTCCAGAATCTTACGTCTATGCGCCAACTTCAGCTTTTCCACAATT 1738
Query 1693 CCCTCAGCGGTGTAATCCCTCAAGGTCTTGGTTTGTACAGTCCTCTATGGGTTGTTGATT 1752
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1739 CCCTCAGTGGTGTAATCCCTCAAGGTCTTGGTTTGTACAGTCCTCTATGGGTTGTTGACT 1798
Query 1753 TTTCAGAGAACCAACTTTCCGGAAAAATACCGCCTTTTATCTGTCAACAAG-CTAATCTC 1811
| ||||| ||||||||||| |||||||||||||||||||||||||||| || ||||||||
Sbjct 1799 TCTCAGAAAACCAACTTTCAGGAAAAATACCGCCTTTTATCTGTCAAC-AGTCTAATCTC 1857
Query 1812 ATTCTGTTGAATCTCGGGTCTAACCGGATATTTGGAAACATTCCACCAGGTATATTGAGA 1871
|||||||||||||||||||||||| ||||||||||||| |||||||||||| ||||| |
Sbjct 1858 ATTCTGTTGAATCTCGGGTCTAACAGGATATTTGGAAATATTCCACCAGGTGTATTGCGC 1917
Query 1872 TGCAAATCGCTGCTGCAGCTACGTGTTGTTGGAAACCGACTCACTGGTCAGTTCCCGACC 1931
|||||||| ||||||||||| |||||||||||||||||||||||||||||||| |||||
Sbjct 1918 TGCAAATCTCTGCTGCAGCTTCGTGTTGTTGGAAACCGACTCACTGGTCAGTTTCCGACT 1977
Query 1932 GAGTTATGCAAGCTTGTCAACCTTTCTGCTATAGAGTTGGATCAAAACCGGTTTAGCGGA 1991
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1978 GAGTTATGCAAGCTTGTCAACCTTTCTGCTATTGAGTTGGATCAAAACCGGTTTAGCGGA 2037
Query 1992 CCGCTACCTCCTGAGATAGGCACTTGCCAGAAGCTGCAAAGACTTCATCTTGCAGCTAAC 2051
|| |||||||||||||||||||| || |||||||||||||||||||||||||||||||||
Sbjct 2038 CCACTACCTCCTGAGATAGGCACGTGTCAGAAGCTGCAAAGACTTCATCTTGCAGCTAAC 2097
Query 2052 CAATTTTCCTCAAATATACCCGAA-GAGATCGGTAAACTCTCCAACCTGGTAACATTTAA 2110
||||||||||| ||| ||||| || || ||| ||||||||||||||||||||||||||||
Sbjct 2098 CAATTTTCCTCTAATCTACCC-AACGAAATCAGTAAACTCTCCAACCTGGTAACATTTAA 2156
Query 2111 CGTTTCCTCAAACTCTCTCACCGGACCAATCCCCTCTGAAATAGCTAACTGTAAGATGCT 2170
||||||||||||||||||||| ||||||||||||||||||||||| |||||||| |||||
Sbjct 2157 CGTTTCCTCAAACTCTCTCACTGGACCAATCCCCTCTGAAATAGCCAACTGTAAAATGCT 2216
Query 2171 TCAACGACTTGACTTGAGCCGGAACAGTTTCATTGGTTCTTTACCTTGCGAGCTTGGAAG 2230
||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||
Sbjct 2217 TCAACGACTTGACTTGAGCCGGAACAGTTTCATCGGTTCTTTACCTCCCGAGCTTGGAAG 2276
Query 2231 TCTTCATCAGCTCGAGATCCTCAGACTCTCAGAAAATAGATTCTCTGGCAACATACCGTT 2290
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 2277 CCTTCATCAGCTCGAGATACTCAGACTCTCAGAAAATAGATTCTCTGGCAACATACCGTT 2336
Query 2291 TACCATTGGAAACCTTACGCATCTAACTGAGCTGCAGATGGGAGGAAACTTGCTTTCAGG 2350
|||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||
Sbjct 2337 TACCATTGGAAACCTTACCCATCTAACTGAGCTGCAGATGGGAGGAAACTTGTTTTCAGG 2396
Query 2351 AAGTATACCGCCTCAACTCGGTTTACTCTCGAGTCTGCAAATTGCAATGAACCTGAGCTA 2410
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 2397 AAGTATACCGCCTCAACTCGGTTTACTCTCGAGTCTGCAGATTGCAATGAACCTGAGCTA 2456
Query 2411 CAATAATTTCAGTGGTGAAATACCTCCCGAGCTTGGGAATCTTTATCTGCTAATGTACCT 2470
|||| |||||||||||||||||||||||||| | ||||||||| ||||||||||||||||
Sbjct 2457 CAATGATTTCAGTGGTGAAATACCTCCCGAGATCGGGAATCTTCATCTGCTAATGTACCT 2516
Query 2471 ATCTCTGAACAACAACCATCTGAGTGGCGAAATCCCAACCACATTCGAGAACTTATCCAG 2530
||||||||||||||||||||| || ||||||||||| |||||||||||||||||||||||
Sbjct 2517 ATCTCTGAACAACAACCATCTCAGCGGCGAAATCCCGACCACATTCGAGAACTTATCCAG 2576
Query 2531 TTTACTCGGCTGCAACTTTTCATACAACAACCTCACTGGACGGCTTCCGCATACGCAGCT 2590
||||||||| ||||||||||| |||||||||||||| |||| |||||| ||||||||| |
Sbjct 2577 TTTACTCGGGTGCAACTTTTCCTACAACAACCTCACCGGACAGCTTCCACATACGCAGAT 2636
Query 2591 CTTTCAAAACATGACTCTAACCAGTTTTCTCGGAAACAAAGGACTCTGTGGCGGCCATTT 2650
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2637 CTTTCAAAACATGACTCTAACCAGTTTTCTCGGAAACAAAGGACTCTGTGGCGGCCATTT 2696
Query 2651 GAGAAGCTGTGACCCTAACCAGTCCTCTTGGCC-CAACCTTTCATCTCTAAAAGCGGGTT 2709
||||||||||||||||| ||| ||||||||||| | || |||||||||||||||||||||
Sbjct 2697 GAGAAGCTGTGACCCTAGCCACTCCTCTTGGCCTC-ACATTTCATCTCTAAAAGCGGGTT 2755
Query 2710 CTGCTCGTCGCGGGAGAATCATCATCATTGTGTCTTCAGTCATTGGCGGTATCTCTCTTT 2769
||||||| | ||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 2756 CTGCTCGGAGGGGGAGAATCATCATCATCGTGTCTTCAGTCATTGGCGGTATCTCTCTTT 2815
Query 2770 TACTCATAGCTATTGTCGTTCATTTCCTAAGAAATCCCGTGGAACCAACGGCTCCTTATG 2829
|||| || || |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2816 TACTAATCGCGATTGTCGTTCATTTCCTAAGAAATCCCGTGGAACCAACGGCTCCTTATG 2875
Query 2830 TGCACGACAAGGAACCCTTTTTTCAAGAATCCGACATTTACTTTGTCCCTAAAGAACGAT 2889
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 2876 TGCACGACAAGGAACCCTTTTTTCAAGAATCCGACATTTACTTTGTCCCGAAAGAACGAT 2935
Query 2890 TCACAGTCAAAGATATTTTGGAAGCAACAAAAGGCTTCCACGATAGCTACATTGTCGGTA 2949
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2936 TCACAGTCAAAGACATTTTGGAAGCAACAAAAGGCTTCCACGATAGCTACATTGTCGGTA 2995
Query 2950 AAGGCGCTTGCGGAACCGTTTACAAAGCGGTTATGCCTTCGGGTAAAACCATAGCAGTTA 3009
|||||||||||| |||||||||||||| ||||||||||| |||||||| ||||||||||
Sbjct 2996 GAGGCGCTTGCGGGACCGTTTACAAAGCAGTTATGCCTTCAGGTAAAACAATAGCAGTTA 3055
Query 3010 AAAAACTCGAATCCAACAGAGAAGGCAACAACAACAACA-CG--------GATAACAGTT 3060
||||||||||||||||||||||||||||||||||||||| | ||||||||||
Sbjct 3056 AAAAACTCGAATCCAACAGAGAAGGCAACAACAACAACAGCAACAACACTGATAACAGTT 3115
Query 3061 TCCGCGCCGAGATTCTAACACTAGGCAAAATCCGTCACAGGAACATTGTCAGGCTCTACA 3120
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 3116 TCCGCGCCGAGATTCTAACACTAGGCAAAATCCGTCACAGGAACATTGTCAGGCTATACA 3175
Query 3121 GTTTCTGTTACCACCAAGGATCAAACTCAAACCTCTTGCTCTACGAGTACATGTCTCGGG 3180
|||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||
Sbjct 3176 GTTTCTGTTACCACCAAGGATCAAACTCGAACCTCTTGCTCTACGAATACATGTCTCGGG 3235
Query 3181 GAAGCCTTGGCGAGTTACTTCACGGCGGGAAATCACATAGCATGGATTGGCCAACTCGGT 3240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3236 GAAGCCTTGGCGAGTTACTTCACGGCGGGAAATCACATAGCATGGATTGGCCAACTCGGT 3295
Query 3241 TTGCTATCGCACTCGGTGCAGCGGAAGGTCTTGCTTACTTGCATCATGATTGTAAACCAA 3300
||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||
Sbjct 3296 TTGCTATCGCACTCGGTGCAGCGGAAGGTCTCGCTTACTTACATCATGATTGTAAACCAA 3355
Query 3301 GGATCATTCACCGCGACATCAAATCTAATAACATTCTCCTTGATGAGAATTTCGAAGCTC 3360
| ||||||||||| ||||||||||| |||||||||||| | ||||||||||||||||| |
Sbjct 3356 GAATCATTCACCGTGACATCAAATCGAATAACATTCTCATCGATGAGAATTTCGAAGCCC 3415
Query 3361 ATGTTGGAGATTTCGGGTTAGCTAAAGTCATCGACATGCCTC-AGTCGAAATCCGTCTCA 3419
|||||||||||||||||||||| ||||||||||||||||| | | || ||||||||||||
Sbjct 3416 ATGTTGGAGATTTCGGGTTAGCAAAAGTCATCGACATGCCACTA-TCAAAATCCGTCTCA 3474
Query 3420 GCCGTCGCTGGATCCTACGGTTACATCGCTCCTGAGTATGCATACACAATGAAAGTAACA 3479
||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 3475 GCCGTTGCTGGATCCTACGGTTACATCGCTCCCGAGTATGCATACACAATGAAAGTAACA 3534
Query 3480 GAGAAATGCGATATCTACAGCTTCGGAGTTGTTCTACTCGAATTGTTAACCGGAAAACCT 3539
||||||||||||||||||||||| ||||||||||| || |||||||||||||| ||| ||
Sbjct 3535 GAGAAATGCGATATCTACAGCTTTGGAGTTGTTCTTCTTGAATTGTTAACCGGGAAAGCT 3594
Query 3540 CCGGTTCAGCCGCTGGAGCAAGGCGGCGATCTTGCCACATGGACAAGAAACCATATCAGA 3599
|||||||||||||| ||||||||||| ||||||||||| |||||||||||||||||||||
Sbjct 3595 CCGGTTCAGCCGCTAGAGCAAGGCGGAGATCTTGCCACGTGGACAAGAAACCATATCAGA 3654
Query 3600 GATCATTCGTTAACATCTGAAATCCTCGATCCTTATTTAACAAAGGTAGAGGACGATGTG 3659
|||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||
Sbjct 3655 GATCATTCGTTAACATCTGAAATCCTTGATCCTTATCTAACAAAGGTAGAGGACGATGTG 3714
Query 3660 ATTCTCAATCATATGATCACAGTGACGAAAATTGCAGTGCTCTGTACGAAATCTTCGCCG 3719
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 3715 ATTCTCAATCATATGATCACAGTGACGAAAATTGCCGTGCTCTGTACGAAATCTTCGCCG 3774
Query 3720 TCGGATCGACCGACAATGAGAGAAGTAGTGTTGATGCTTATAGAGTCCGGAGAACGTGCC 3779
|| ||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 3775 TCTGATCGACCGACGATGAGAGAAGTAGTGTTGATGCTTATAGAGTCCGGTGAACGTGCC 3834
Query 3780 GGAAAAGTAATTGTGTCCACCACGTGCGGTGATTTACCTCCACCGGCGCCGCCGTGAAAA 3839
||||||||||||||||| || |||||| ||||||||||||||||||||||||||||||||
Sbjct 3835 GGAAAAGTAATTGTGTCTACAACGTGCAGTGATTTACCTCCACCGGCGCCGCCGTGAAAA 3894
Query 3840 AGGGTCTTTTTA---CT--C-----C-------GAAATTGATTAATGAATAGATTAATAT 3882
| | |||||||| || | | ||||||||||| || ||||||||||||
Sbjct 3895 AAGTTCTTTTTATAACTTACTTTTTCTTTCTCCGAAATTGATTA-TGTATAGATTAATAT 3953
Query 3883 GATTTGTATAGTCATTATAGAAAAAA 3908
|||||||||||||||||||||| |||
Sbjct 3954 GATTTGTATAGTCATTATAGAAGAAA 3979
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 194697905783
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5