BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg482264 Length=941 Score E Sequences producing significant alignments: (Bits) Value AT2G33270.1 | Symbols: ACHT3 | atypical CYS HIS rich thioredox... 1343 0.0 > AT2G33270.1 | Symbols: ACHT3 | atypical CYS HIS rich thioredoxin 3 | chr2:14103543-14105204 FORWARD LENGTH=960 Length=960 Score = 1343 bits (727), Expect = 0.0 Identities = 877/947 (93%), Gaps = 19/947 (2%) Strand=Plus/Plus Query 1 GCTTTTGAGGGTTGGGAGAGAGTAGAAGAGAAATATCAAATTTCCCTTCaaaa---aaaC 57 ||||| |||||| |||||||||||||||||||||||||||||||||||||||| | Sbjct 1 GCTTTCGAGGGTGGGGAGAGAGTAGAAGAGAAATATCAAATTTCCCTTCAAAAGCCTCTC 60 Query 58 C-CTC-----TCAAG-TTTTTT-CTTGGATGTCACATGTTTCATGTGGAACAAGGCAGTT 109 | ||| ||||| |||||| ||||||||| |||||||| ||||||||||||||||| Sbjct 61 CTCTCTTTGTTCAAGTTTTTTTCCTTGGATGT-GCATGTTTCTTGTGGAACAAGGCAGTT 119 Query 110 CTGTTTTTAAGTAAAAGTCATGGCGACAGATTCGTTCATCAAGTTAAATCCAATTTCCAT 169 |||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| | Sbjct 120 CTGTTTTTAAGTAAAATTCATGGCGACGGATTCGTTCATCAAGTTAAATCCAATTTCCTT 179 Query 170 TAACCGTCCCCGCTTCAACCTCAGAGAGTTTGCTGGCATAAGTCCTAAAAGCATCTCTTC 229 ||||||| |||||||| ||||| |||| |||||||||||||||||||||||||||||||| Sbjct 180 TAACCGTGCCCGCTTCGACCTCCGAGATTTTGCTGGCATAAGTCCTAAAAGCATCTCTTC 239 Query 230 TTTGTGCTGCATTAGCCCAAGAATGATATCTTGCAACCATTTCAGCCCGAGAACATTGAT 289 | |||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 240 TCTGTGTTGCATTAGCCCAAGATTGATATCTTGCAACCATTTCAGCCCGAGAACATTGAT 299 Query 290 CTCCGGCGAGAATGATATCATATTGTTTCCCAAGAAAAAGATCCCCGCGTTTGTCCGATG 349 ||||||||||||| || |||||||||| ||||||||||||||||||||||||||||||| Sbjct 300 ATCCGGCGAGAATGGTAACATATTGTTTTCCAAGAAAAAGATCCCCGCGTTTGTCCGATG 359 Query 350 TCAGACAAGTCTTGGGATTGGAAGGAACCAAAAATGGTGGGAGAAGGAACTGCAACCGAA 409 |||||||||||||||||| |||||||||||||||||||||||||||||| || ||||||| Sbjct 360 TCAGACAAGTCTTGGGATCGGAAGGAACCAAAAATGGTGGGAGAAGGAATTGAAACCGAA 419 Query 410 CATGAAGTCGGTGACATCACCGGAAGATCTTGTCGGT-TCTTTACGTAACGCCGGAGATA 468 |||||||||||| ||||||||| ||||||||||| || |||||||||||||| ||||||| Sbjct 420 CATGAAGTCGGTTACATCACCGCAAGATCTTGTC-GTCTCTTTACGTAACGCTGGAGATA 478 Query 469 AACTTTTCGTTGTGGATTTCTTCTCACCTAGCTGTGGTGGCTGCAAAGCTCTTCATCCCA 528 ||||| ||||||| ||||||||||| ||||| |||||||||||||||||||||||||||| Sbjct 479 AACTTGTCGTTGTTGATTTCTTCTCGCCTAGTTGTGGTGGCTGCAAAGCTCTTCATCCCA 538 Query 529 AGATATGTAAAATTGCAGAGAAGAATCCGGAAGTAGAGTTTCTACAAGTGAATTATGAAG 588 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 539 AGATATGTAAAATTGCAGAGAAGAATCCGGAAGTAGAGTTTCTACAAGTGAATTATGAAG 598 Query 589 ACCATAGAAGTTTATGTCAAAGTCTTAACGTTCATGTTCTTCCCTTCTTCCGCTTCTACC 648 | ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| | Sbjct 599 AACATAGAAGTTTATGTCAAAGTCTTAACATTCATGTTCTTCCCTTCTTCCGCTTCTATC 658 Query 649 GCGGTTCCTCAGGCCGCGTTTGCAGCTTCAGTTGTACTAATGCCACGATAAAGAAATTCA 708 | |||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 659 GTGGTTCCTCTGGCCGCGTTTGCAGCTTCAGTTGTACTAATGCCACGATAAGGAAATTCA 718 Query 709 AGGAGGCATTAGAGAAGCATGGGAGGGAGCAATGTAGCATTGGAGAAACAAAGGGGCTTG 768 |||| || || ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 719 AGGAAGCGTTGGAGAAGCATGGGAGGGAGCAATGTAGCATTGGAGAAACAAAGGGGCTTG 778 Query 769 AGGAGAAAGAACTTGTCGCCATGGCTGCAAATAAAGACCTATCGTTCGATTATAAATCCA 828 |||||||||||||||||||||||||||||||||||||| | || |||||||||||| ||| Sbjct 779 AGGAGAAAGAACTTGTCGCCATGGCTGCAAATAAAGACTTGTCATTCGATTATAAACCCA 838 Query 829 AATCGAT-TGGAAATAGCCAAGAGCAAAAAGAA-AAAGATATATTTCTCCCAAAATCTCC 886 |||| | |||||||| ||||||||||||| || ||||| ||||||||||| |||||||| Sbjct 839 CATCG-TGTGGAAATATCCAAGAGCAAAAA-AAGAAAGAAATATTTCTCCCGAAATCTCC 896 Query 887 AACTTCGAATAAACAAAAAGAAGTAGAACATTCTCTACTAGTTAGTT 933 ||||| ||||||||||||||||||||||||||||||||| | |||| Sbjct 897 AACTTTTAATAAACAAAAAGAAGTAGAACATTCTCTACTACT-AGTT 942 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 46014478652 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5