BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg482299
Length=1491
Score E
Sequences producing significant alignments: (Bits) Value
AT2G33530.1 | Symbols: scpl46 | serine carboxypeptidase-like 46... 2338 0.0
AT1G28110.1 | Symbols: SCPL45 | serine carboxypeptidase-like 45... 1417 0.0
> AT2G33530.1 | Symbols: scpl46 | serine carboxypeptidase-like
46 | chr2:14197646-14200560 REVERSE LENGTH=1642
Length=1642
Score = 2338 bits (1266), Expect = 0.0
Identities = 1420/1495 (95%), Gaps = 7/1495 (0%)
Strand=Plus/Plus
Query 2 ACAATGTCTCGCCTACATTGCCTAACAATGGCGACTGCACTAA-T-T-CTGCTTCAAGCT 58
|||||| |||||||||| |||||||||||||||||| |||||| | | ||||||||||||
Sbjct 22 ACAATGCCTCGCCTACAATGCCTAACAATGGCGACTTCACTAATTCTGCTGCTTCAAGCT 81
Query 59 CTGAGTTTAGTAAGCTGC-AGTATCCTATCCCGGGCCGATCGGATCACCCGTTTACCCGG 117
||||||||||| |||| | | ||| || ||||||||||||||||||||||||||||||||
Sbjct 82 CTGAGTTTAGTGAGCT-CAACTATTCTGTCCCGGGCCGATCGGATCACCCGTTTACCCGG 140
Query 118 TCAACCCCGGGTCGGATTTCAGCAGTACTCAGGTTATGTCACTATTGACGATAAGAAACA 177
||||||||| ||||| ||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 141 TCAACCCCGAGTCGGGTTTCAGCAGTACTCAGGTTATGTCACTATTGACGAGAAGAAACA 200
Query 178 GAGAGCTCTGTTTTACTACTTGGCTGAAGCAGAAACCAAACCCATCTCTAAACCTCTCGT 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 201 GAGAGCTCTGTTTTACTACTTGGCTGAAGCAGAAACCAAACCCATCTCTAAACCTCTCGT 260
Query 238 CCTCTGGCTTAATGGAGGACCGGGATGTTCATCATTAGGTGTTGGTGCATTCTCTGAGAA 297
|||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 261 TCTCTGGCTCAATGGAGGACCTGGATGTTCATCATTAGGTGTTGGTGCATTCTCTGAGAA 320
Query 298 TGGACCTTTTAGACCAAAAGGATCAGTCTTGGTGAGGAATCTACACAGCTGGAATCAAGA 357
|||||||||||||||||| |||||| |||||||||| |||| ||||||||||||||||||
Sbjct 321 TGGACCTTTTAGACCAAAGGGATCAATCTTGGTGAGAAATCAACACAGCTGGAATCAAGA 380
Query 358 GGCTAATATGTTGTATCTGGAGACACCTGTTGGAGTTGGATTTTCTTATGCAACTGAGAG 417
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 381 GGCTAATATGTTGTATCTGGAGACACCTGTTGGAGTTGGATTTTCTTATGCAAATGAGAG 440
Query 418 CTCCTCTTATGAGGGTGTGAATGATAAGATCACTGCAAAAGACAATCTTGTGTTCTTGCA 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 441 CTCCTCTTATGAGGGTGTGAATGATAAGATCACTGCAAAAGACAATCTTGTGTTCTTGCA 500
Query 478 AAAATGGTTCCTCAAATTCCCTCAATATCTCAATAGAAGTCTTTTCATCACTGGTGAAAG 537
||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct 501 AAAATGGTTCCTCAAATTCCCTCAATATCTCAACAGAAGTCTCTTCATCACTGGTGAAAG 560
Query 538 CTACGCTGGCCATTATGTTCCTCAGTTAGCTCAGCTTATGATTCAGTACAACAAGAAGCA 597
||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 561 CTATGCTGGCCATTATGTTCCTCAGTTGGCTCAGCTTATGATTCAGTACAACAAGAAGCA 620
Query 598 CAATTTGTTTAATCTCAAAGGCATTGCTATTGGCAATCCGGTTATGGAGTTTGCGACGGA 657
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 621 CAATTTGTTTAATCTCAAAGGCATTGCTATTGGCAATCCGGTTATGGAGTTTGCAACGGA 680
Query 658 TTTCAATTCACGAGCGGAGTATTTCTGGTCTCACGGGTTGATATCGGATCCAACATACAA 717
||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||
Sbjct 681 TTTCAATTCACGAGCAGAGTATTTCTGGTCTCACGGGTTGATATCGGATCCAACTTACAA 740
Query 718 AATGTTCACATCTTATTGTAATTACTCGCGATATGTGAGTGAGTACTATAGAGGATCAGT 777
| |||||||||||| ||||||||||||| ||| | ||||||||||| |||||||||||||
Sbjct 741 ATTGTTCACATCTTCTTGTAATTACTCGAGATTTTTGAGTGAGTACCATAGAGGATCAGT 800
Query 778 GTCAAGTATGTGCACTAAAGTGATGAGTCAAGTTAGCATCGAAACAAGTAGATTCGTAGA 837
||| |||||||||||||||||| | ||||||||| |||||||||||||||||||| ||||
Sbjct 801 GTCGAGTATGTGCACTAAAGTGCTAAGTCAAGTTGGCATCGAAACAAGTAGATTCATAGA 860
Query 838 CAAATATGACGTTACTCTTGACGTGTGCATTCCCTCTGTGCTATCTCAATCCAAAGTAGT 897
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 861 CAAATATGACGTTACTCTTGACGTCTGCATTCCCTCTGTGCTATCTCAATCCAAAGTAGT 920
Query 898 TAACCCTCAACCTCAACAAGTGGGAGAGACGGTGGATGTTTGTGTAGAAGATGAGACGGT 957
|| |||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||
Sbjct 921 TAGCCCTCAACCTCAACAAGTGGGAGAGACGGTGGATGTGTGTCTAGAAGATGAGACGGT 980
Query 958 GAACTATCTTAACCGGAGAGATGTGCAAAAAGCTCTCCATGCTCGGCTTGTCGGAACTCG 1017
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 981 GAACTATCTTAACCGGAGAGATGTGCAAAAAGCTCTCCACGCTCGGCTTGTCGGAACTCG 1040
Query 1018 CAAATGGGCTGTTTGCAGCAATGTGCTGGATTACGAAGTACTTGATGTGGAAGTACCAAC 1077
||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1041 CAAATGGACTGTTTGCAGCGATGTGCTGGATTACGAAGTACTTGATGTGGAAGTACCAAC 1100
Query 1078 GATTAATATTGTAGGAAGTCTGGTTAAAGCTGGAGTTCCGGTTCTTGTGTACAGCGGAGA 1137
||| ||||| ||||||||||| ||||||||||| ||||| ||| |||||||||| |||||
Sbjct 1101 GATAAATATCGTAGGAAGTCTTGTTAAAGCTGGTGTTCCAGTTTTTGTGTACAGTGGAGA 1160
Query 1138 TCAAGATTCTGTGATTCCGTTGACTGGAAGTAGAACATTAGTGAAGCGACTGGCTGAAGA 1197
|||||| |||||||||||||| || |||||||||||||||||||||||||||||||||||
Sbjct 1161 TCAAGACTCTGTGATTCCGTTAACCGGAAGTAGAACATTAGTGAAGCGACTGGCTGAAGA 1220
Query 1198 GTTGGGACTGAGAACAACCGTGCCTTATCGAGTTTGGTTCGCGGGACAACAGGTTGGTGG 1257
||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1221 GTTGGGACTAAGAACAACCGTGCCTTATCGAGTTTGGTTCGCAGGACAACAGGTTGGTGG 1280
Query 1258 GTGGACTCAGGTTTATGGGAATACATTGGCGTTTGCAACTGTGAGAGGAGCAGCCCACGA 1317
||||||||| ||||||||||| |||||||||||||| |||||||||||||||||||||||
Sbjct 1281 GTGGACTCAAGTTTATGGGAACACATTGGCGTTTGCCACTGTGAGAGGAGCAGCCCACGA 1340
Query 1318 AGTACCATTCTCGCAGCCCGCGAGAGCGCTCGTGTTGTTTAAAGCATTCTTGGGCGGTCG 1377
||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||
Sbjct 1341 GGTACCATTCTCGCAGCCCGCGAGAGCGCTTGTGTTGTTTAAAGCATTCTTGGGTGGTCG 1400
Query 1378 TCCTCTCCCTGAAGAATTCTGATGT-TTTCACCATTTTCTAAGCTTGTAAGTAAACATTG 1436
|||||||||||||||||||| ||| ||| |||||||||| |||||||||||||||||||
Sbjct 1401 TCCTCTCCCTGAAGAATTCTAATGCGTTT-ACCATTTTCTGAGCTTGTAAGTAAACATTG 1459
Query 1437 GTGAACAATGTCCCAAAATGGCTATATTTGATCCAGGGCGAGAAAATAAAATACT 1491
|||||||||||||||||||||||||||||||| || |||||||||| |||||||
Sbjct 1460 GTGAACAATGTCCCAAAATGGCTATATTTGATTCACGGCGAGAAAAGGAAATACT 1514
> AT1G28110.1 | Symbols: SCPL45 | serine carboxypeptidase-like
45 | chr1:9803865-9806896 REVERSE LENGTH=1738
Length=1738
Score = 1417 bits (767), Expect = 0.0
Identities = 1145/1327 (86%), Gaps = 27/1327 (2%)
Strand=Plus/Plus
Query 95 GATCGGA-TCACCCGTTTACCCGGTCAACCCCGGGTCGGATTTCAGCAGTACTCAGGTTA 153
|||| || |||||||||||||||||||||||||||||||||||||||| ||||| |||||
Sbjct 152 GATC-GAGTCACCCGTTTACCCGGTCAACCCCGGGTCGGATTTCAGCAATACTCCGGTTA 210
Query 154 TGTCACTATTGACGATAAGAAACAGAGAGCTCTGTTTTACTACTTGGCTGAAGCAGAAAC 213
||||||| | ||||| ||||||||||||||||||||||||||||| || || ||||||||
Sbjct 211 TGTCACTGTCGACGACAAGAAACAGAGAGCTCTGTTTTACTACTTCGCCGAGGCAGAAAC 270
Query 214 CAAACCCATC-TCTAAACCTCTCGTCCTCTGGCTTAATGGAGGACCGGGATGTTCATCAT 272
||| || ||| ||||||||||||||||||||||| ||||||||||| ||||||||||| |
Sbjct 271 CAATCC-ATCCTCTAAACCTCTCGTCCTCTGGCTCAATGGAGGACCTGGATGTTCATCTT 329
Query 273 TAGGTGTTGGTGCATTCTCTGAGAATGGACCTTTTAGACCAAAAGGATCAGTCTTGGTGA 332
| || ||||| |||||||| || || ||||| ||||||||||||||| || ||||||| |
Sbjct 330 TGGGCGTTGGGGCATTCTCAGAAAACGGACCATTTAGACCAAAAGGACCAATCTTGGTCA 389
Query 333 GGAATCTA-CACAGCTGGAATCAAGAGGCTAATATGTTGTATCTGGAGACACCTGTTGGA 391
||||| | || |||||||| ||||||||||||||||||||||| |||||||||||||||
Sbjct 390 AGAATC-AGCATAGCTGGAACCAAGAGGCTAATATGTTGTATCTAGAGACACCTGTTGGA 448
Query 392 GTTGGATTTTCTTATGCAACTGAGAGCTCCTC-TTATGAGGGTGTGAATGATAAGATCAC 450
|||||||| |||||| ||||| | |||||| | |||||||||||| ||||||||||||||
Sbjct 449 GTTGGATTCTCTTATTCAACTCAAAGCTCC-CATTATGAGGGTGTTAATGATAAGATCAC 507
Query 451 TGCAAAAGACAATCTTGTGTTCTTGCAAAAATGGTTCCTCAAATTCCCTCAATATCTCAA 510
||||| |||||| |||||||||||||||| |||||| |||||||||||||| || |||||
Sbjct 508 TGCAAGAGACAACCTTGTGTTCTTGCAAAGATGGTTTCTCAAATTCCCTCATTACCTCAA 567
Query 511 TAGAAGTCTTTTCATCACTGGTGAAAGCTACGCTGGCCATTATGTTCCTCAGTTAGCTCA 570
| ||||||| ||||||||||||||||| || |||||||||||||||||||| ||||| |
Sbjct 568 TCGAAGTCTCTTCATCACTGGTGAAAGTTATGCTGGCCATTATGTTCCTCAACTAGCTGA 627
Query 571 GCTTATGATTCAGTACAACAAGAAGCACAATTTGTTTAATCTCAAAGGCATTGCTATTGG 630
|||||||||||||||||||||||||||| ||||||| ||||| | ||| |||||||||||
Sbjct 628 GCTTATGATTCAGTACAACAAGAAGCACCATTTGTTCAATCTGAGAGGAATTGCTATTGG 687
Query 631 CAATCCGGTTATGGAGTTTGCGACGGATTTCAATTCACGAGCGGAGTATTTCTGGTCTCA 690
|||||| ||| ||||||||||||| |||||||| || ||||| ||||| |||||||||||
Sbjct 688 CAATCCAGTTTTGGAGTTTGCGACAGATTTCAACTCGCGAGCTGAGTACTTCTGGTCTCA 747
Query 691 CGGGTTGATATCGGATCCAACATACAAAATGTTCACATCTTATTGTAATTACTCGCGATA 750
|| |||||||||||| | || |||||||||||||||||||| |||||||||||||| ||
Sbjct 748 TGGCTTGATATCGGATTCGACTTACAAAATGTTCACATCTTACTGTAATTACTCGCGCTA 807
Query 751 TGTGAGTGAGTACTATAGAGGATCAGTGTCAAGTATGTGCACTAAAGTGATGAGTCAAGT 810
||||||||||||||||||||| ||| |||| ||||||||| |||| ||||||||||||||
Sbjct 808 TGTGAGTGAGTACTATAGAGGGTCAATGTCTAGTATGTGCTCTAAGGTGATGAGTCAAGT 867
Query 811 TAGCA-TCGAAACAAGTAGATTCGTAGACAAATATGACGTTACTCTTGACGTGTGCATTC 869
||||| | || || ||| |||| || || |||||||| || ||||| || || |||||||
Sbjct 868 TAGCACT-GAGACGAGTCGATTTGTTGATAAATATGATGTCACTCTCGATGTTTGCATTC 926
Query 870 CCTCTGTGCTATCTCAATCCAAAGTAGTTAA-CCCTCAACCTCAACAAGTGGGAGAGA-C 927
|||||||||||||||||||||||||||| || ||| ||| |||| |||||||| | |
Sbjct 927 CCTCTGTGCTATCTCAATCCAAAGTAGT-AAGCCC-CAA--TCAA---GTGGGAGA-ATC 978
Query 928 GGTGGATGTTTGTGTAGAAGATGAGACGGTGAACTATCTTAACCGGAGAGATGTGCAAAA 987
|||||||||||||| |||||||||||||| |||||||| ||||| ||||||||||| |
Sbjct 979 TGTGGATGTTTGTGTCGAAGATGAGACGGTCAACTATCTAAACCGAAGAGATGTGCAGGA 1038
Query 988 AGCTCTCCATGCTCGGCTTGTCGGAACT-CGCAAATGGGCTGTTTGCAGCAATGTGCTGG 1046
|||||| ||||||||||| | ||| | || ||||| | ||||||||||||||||| |
Sbjct 1039 AGCTCTTCATGCTCGGCTCATAGGAG-TACGTGAATGGACAGTTTGCAGCAATGTGCTTG 1097
Query 1047 ATTACGAAGTACTTGATGTGGAAGTACCAACGATTAATATTGTAGGAAGTCTGGTTAAAG 1106
||||| || | |||||||||||| |||||||||||||||| ||||| || || |||||||
Sbjct 1098 ATTACCAATTGCTTGATGTGGAAATACCAACGATTAATATCGTAGGGAGCCTTGTTAAAG 1157
Query 1107 CTGGAGTTCCGGTTCTTGTGTACAGCGGAGATCAAGATTCTGTGATTCCGTTGACTGGAA 1166
|||||||||| |||||||| ||||| |||||||||||||||||||| |||||||| ||||
Sbjct 1158 CTGGAGTTCCAGTTCTTGTCTACAGTGGAGATCAAGATTCTGTGATCCCGTTGACAGGAA 1217
Query 1167 GTAGAACATTAGTGAAGC-GACTGGCTGAAGAGTTGGGACTGAGAACAACCGTGCCTTAT 1225
||||||| ||||||| | || |||| || | |||||||||||||||| || ||||||
Sbjct 1218 GTAGAACCTTAGTGA-GTAGATTGGCCAAACAATTGGGACTGAGAACAAGTGTACCTTAT 1276
Query 1226 CGAGTTTGGTTCGCGGGACAACAGGTTGGTGGGTGGACTCAGGTTTATGGGAATA-CATT 1284
||||| ||||| || || ||||||||||| || |||||||| || ||||| ||| | ||
Sbjct 1277 CGAGTCTGGTTTGCAGGCCAACAGGTTGGAGGATGGACTCAAGTCTATGGAAATGTC-TT 1335
Query 1285 GGCGTTTGCAACTGTGAGAGGAGCAGCCCACGAAGTACCATTCTCGCAGCCCGCGAGAGC 1344
| | |||||||| ||| ||||||| | ||||| || |||||||| ||||| | |||| |
Sbjct 1336 GTCCTTTGCAACAGTGCGAGGAGCTTCACACGAGGTCCCATTCTCACAGCCTGAGAGATC 1395
Query 1345 GCTCGTGTTGTTTAAAGCATTCTTGGGCGGTCGTCCTCTCCCTGAAGAATTCTGATGTTT 1404
|| || |||| || || ||||||| ||| | |||||| |||||||||||||||| ||
Sbjct 1396 ACTTGTCCTGTTCAAGGCGTTCTTGGACGGCCATCCTCTTCCTGAAGAATTCTGATATTG 1455
Query 1405 TCACCAT 1411
| |||||
Sbjct 1456 T-ACCAT 1461
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 73543798425
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5