BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg482304 Length=2204 Score E Sequences producing significant alignments: (Bits) Value AT2G33580.1 | Symbols: | Protein kinase superfamily protein | ... 3131 0.0 > AT2G33580.1 | Symbols: | Protein kinase superfamily protein | chr2:14219623-14221861 REVERSE LENGTH=2239 Length=2239 Score = 3131 bits (1695), Expect = 0.0 Identities = 2050/2216 (93%), Gaps = 46/2216 (2%) Strand=Plus/Plus Query 1 AACACCACAAAACATGGCTGCGCGTACACTCCACGCGCTGTCAGTCTCCACCTTGTTCCT 60 |||||||||||||||||||||| |||||||||||||||| |||| | |||||| ||||| Sbjct 7 AACACCACAAAACATGGCTGCGTGTACACTCCACGCGCTCTCAG--T-CACCTTATTCCT 63 Query 61 CCTCCTCCTCTTCTTCGCCGCATCACCAGCGAAAGCTCAGCAACCGTACGTCAACAACCA 120 ||| | |||||||| |||| ||||| |||||||||||||||||||||||||||||||| Sbjct 64 CCT--T-CTCTTCTTTGCCGTGTCACCGGCGAAAGCTCAGCAACCGTACGTCAACAACCA 120 Query 121 CCAGCTCGCCTGCGAGGTCCGCGAT-TTCGACAACATAACCAACGGATTCACATGTAACG 179 ||||||||||||||||||||| | | | |||||||||||||||||||||||||||||||| Sbjct 121 CCAGCTCGCCTGCGAGGTCCGTG-TCTACGACAACATAACCAACGGATTCACATGTAACG 179 Query 180 GCCCAACC-TCTTGCCGCTCTTACCTCACTTTCTATTCTCAACCACCGTACAACACGGCG 238 |||| ||| ||||||||||| ||||||||||||| |||||||||||||||||||||||| Sbjct 180 GCCC-ACCTTCTTGCCGCTCATACCTCACTTTCTGGTCTCAACCACCGTACAACACGGCG 238 Query 239 GACTCAATCGCCAAACTCCTCAACGTTTCTGCCGCAGAGATCCAATCAATCAACAAACTT 298 |||||||||||||||||||||||||| || |||||||||||||||||||||||||| || Sbjct 239 GACTCAATCGCCAAACTCCTCAACGTCTCCGCCGCAGAGATCCAATCAATCAACAACCTC 298 Query 299 CCCACCGTCACCACCAGAATCCGTACCCGTGACTTGGTCGTGATCCCAGCTAACTGctcc 358 ||||| | |||||||||||||| |||||||| || |||||||||||||||||||||||| Sbjct 299 CCCACAGCCACCACCAGAATCCCAACCCGTGAATTAGTCGTGATCCCAGCTAACTGCTCC 358 Query 359 tgctcctcctcctcctcctcctccGGAGGATTTTACCAGCACAACGCCACTTACAATCTC 418 || |||||||||| ||||||||||||||| ||||||||||||||||||||| Sbjct 359 TG---------CTCCTCCTCCAGCGGAGGATTTTACCAACACAACGCCACTTACAATCTC 409 Query 419 TCCGGCAACAGAGGAGTA-GAGACGTATTTCTCGGTGGCTAACGATACTTACCAAGCTTT 477 ||||| |||||||||| | || || |||||||| |||||||||||||||||||||||||| Sbjct 410 TCCGGTAACAGAGGAG-ATGAAACCTATTTCTCAGTGGCTAACGATACTTACCAAGCTTT 468 Query 478 ATCCACGTGTCAAGCCATGATGTCACAAAACCGTTACGGCGAGAAAGAACTAACCCCCGG 537 |||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||| Sbjct 469 ATCCACGTGTCAAGCCATGATGTCACAAAACCGTTACGGCGAGAGACAACTAACCCCCGG 528 Query 538 ATTAAACCTCCTTGTTCCTCTCCGATGTGCTTGCCCCACCGCGAATCAAA-CAGCCGCCG 596 |||||||||||||||||||||||||||||||| |||||||| || |||| || |||||| Sbjct 529 CTTAAACCTCCTTGTTCCTCTCCGATGTGCTTGTCCCACCGCCAAACAAACCA-CCGCCG 587 Query 597 GATTTAAATATCTCTTGACTTACTTAGTCGCCAGGGGAGATAGTATCTCCGTCATCGCCG 656 |||||||||||||| |||||||||||||||||| ||||||||||||||||| |||||||| Sbjct 588 GATTTAAATATCTCCTGACTTACTTAGTCGCCATGGGAGATAGTATCTCCGGCATCGCCG 647 Query 657 ATAGGTTCAATAGCACAACCGCCGCTATAACCGAAGGTAACGAGCTTACATCAGAAGACA 716 | | |||||| |||||| ||||||| |||||||||||||||||||||||||| ||||| Sbjct 648 AGATGTTCAACAGCACATCCGCCGCCATAACCGAAGGTAACGAGCTTACATC---AGACA 704 Query 717 CTATCTACTTCTTCACGCCGGTGCTTGTTCCTCTCAGAACTGAACCTACCAAAATCGTGA 776 ||||| ||||||||| ||||| || |||||||||| ||||||||||||||||||||| | Sbjct 705 ATATCTTCTTCTTCACACCGGTTCTAGTTCCTCTCACAACTGAACCTACCAAAATCGTTA 764 Query 777 AATCTCCGTCACCTCCTCCTCCACCTGTTATTGTTACGCCGCCTCAAACGCCGGTGGATC 836 ||||||||| |||||||||||||| ||| ||| |||||||||||||||||| || |||| Sbjct 765 TATCTCCGTCGCCTCCTCCTCCACCCGTTGTTGCTACGCCGCCTCAAACGCCAGTTGATC 824 Query 837 CTCCGGGATCTTCTTCTTCTTCTCACAAATGGATTTACATCGGAATTGGAATCGGAGCTG 896 |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 825 CTCCGGGA---TCTTCTTCTTCTCACAAATGGATCTACATCGGAATTGGAATCGGAGCTG 881 Query 897 GTTTGCTTCTCTTAATCTCAATCTTAGCTCTCTGCTTCTACAAACGAAGGTCTAAGAAGA 956 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 882 GTTTGCTTCTCTTACTCTCAATCTTAGCTCTCTGCTTCTACAAACGAAGGTCTAAGAAGA 941 Query 957 AGTCATCGTCGTCGTCGTTACCGGAGGAGAATAAGCTCTTTGATTCATCAAACAAACAAT 1016 |||||| |||||||||| ||||||||||| ||||||||||||||||||| |||||||| Sbjct 942 AGTCATTACCGTCGTCGTTGCCGGAGGAGAACAAGCTCTTTGATTCATCAACCAAACAAT 1001 Query 1017 CTATT-CC-C-ACAACAACGACTCAATGGTCAACAGATTTATCCAATTCATCAGAAGCTT 1073 ||||| || | |||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 1002 CTATTCCCACAACAACAACGACTCAATGGTCAATAGATTTATCCAATTCATCAGAAGCTT 1061 Query 1074 TTGGTCTT-AAATCCGCCATAGAATCTCTAACACTATACAGATTCAACGATCTTCAATCC 1132 | ||| || |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1062 TCGGT-TTAAAATCCGCCATAGAATCTCTAACACTATACAGATTCAACGATCTTCAATCA 1120 Query 1133 GCTACTTCGAATTTCAGCGACGAAAACAGAATCAAAGGCTCTGTTTATCGCGCGACGATC 1192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 1121 GCTACTTCGAATTTCAGCGACGAAAACAGAATCAAAGGCTCTGTTTATCGCGCGACAATC 1180 Query 1193 AACGGAGATGATGCGGCGGTGAAAGTGATCAAAGGAGATGTTTCTTCCTCCGAGATCAAC 1252 ||||| || ||||| || |||||||||||||||||||||||||||||||| |||||||| Sbjct 1181 AACGGCGACGATGCCGCTGTGAAAGTGATCAAAGGAGATGTTTCTTCCTCTGAGATCAAT 1240 Query 1253 CTTTTGAAGAAGCTAAATCATTCTAATATCATCCGTCTCTCCGGTTTCTGTATCCGCGAA 1312 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| Sbjct 1241 CTTTTGAAGAAGCTAAATCATTCTAATATCATCCGTCTCTCAGGTTTCTGTATCCGTGAA 1300 Query 1313 GGAACCTCGTACCTTGTCTTCGAGTATTCGGAGAATGGATCGATCAGTGATTGGCTTCAC 1372 ||||| |||||||| |||||||||||||| |||||||||||||||||||||||||||||| Sbjct 1301 GGAACATCGTACCTCGTCTTCGAGTATTCAGAGAATGGATCGATCAGTGATTGGCTTCAC 1360 Query 1373 TCGTCGGACAAGAAAACTCTGACATGGAAACAGAGAGTTGAAATAGCTAGGGATGTAGCA 1432 ||||||| |||||| | | |||||||||||||||||||||||||||| |||||||| ||| Sbjct 1361 TCGTCGGGCAAGAAGAGTTTGACATGGAAACAGAGAGTTGAAATAGCAAGGGATGTGGCA 1420 Query 1433 GAGGCATTAGACTATCTTCATAACTATATAACTCCACCTCATATCCACAAGAACTTGGAA 1492 ||||| ||||| ||||| |||||||||||||||||||||||||| || |||||||||||| Sbjct 1421 GAGGCGTTAGATTATCTCCATAACTATATAACTCCACCTCATATTCATAAGAACTTGGAA 1480 Query 1493 TCAACCAACATACTTCTTGATTCTAATTTCAGAGCCAAGATTGCGAATTTCGGGGTTGCG 1552 ||||| ||||||||||| ||||||||||||||||||||||||||||||||||| |||||| Sbjct 1481 TCAACAAACATACTTCTGGATTCTAATTTCAGAGCCAAGATTGCGAATTTCGGTGTTGCG 1540 Query 1553 AGGATTCTTGATGAAGGTGATCTTGATCTTCAGTTAACAAGACATGTTGAAGGAACACAA 1612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1541 AGGATTCTTGATGAAGGTGATCTTGATCTTCAGTTAACAAGACATGTTGAAGGAACACAA 1600 Query 1613 GGCTACTTAGCTCCAGAGTATGTGGAGAATGGAGTCATAACTCCGAAGCTAGACGTGTTT 1672 |||||||||||||||||||||||||||||||||||||| ||| |||| |||||||||||| Sbjct 1601 GGCTACTTAGCTCCAGAGTATGTGGAGAATGGAGTCATTACTTCGAAACTAGACGTGTTT 1660 Query 1673 GCTTTTGGAGTTGTGGTTCTTGAGCTTCTTTCAGGGAGAGAAGCAGTGACGATACATaag 1732 ||||||||||||| |||||||||||||||||| |||||||||||||| |||||||||||| Sbjct 1661 GCTTTTGGAGTTGCGGTTCTTGAGCTTCTTTCGGGGAGAGAAGCAGTAACGATACATAAG 1720 Query 1733 aagaaggagaaggaagaggaagaagaagTGGAGGTGTTGTGTAAAGTGATAAACAATGTG 1792 |||||||| | ||| || | |||||||||||| ||||||||||||||||||||| |||| Sbjct 1721 AAGAAGGA-A-GGA-GA--A-GAAGAAGTGGAGATGTTGTGTAAAGTGATAAACAGTGTG 1774 Query 1793 CTTGGAGGAGAGAATGTGAGAGAGAAGCTAAAAGAGTTCATGGATCCATCTCTAGGGAAT 1852 ||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| Sbjct 1775 CTTGGAGGAGAGAATGTGAGAGAGAAGTTAAAAGAGTTTATGGATCCATCTCTAGGGAAT 1834 Query 1853 GAGTATCCGTTGGAGCTGGCTTACACCATGGCTCAGCTTGCCAAGAGCTGTGTCGCAACT 1912 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 1835 GAGTATCCGTTGGAGCTGGCTTACACCATGGCTCAGCTTGCTAAGAGCTGTGTCGCAACT 1894 Query 1913 GATCTTAACTCGCGTCCATCTGTCACGCAGGTTCTAACCACGCTTTCGATGATAGTCTCC 1972 |||||||||||||||||||||||||| ||||||||||||||||| || ||||| |||||| Sbjct 1895 GATCTTAACTCGCGTCCATCTGTCACTCAGGTTCTAACCACGCTCTCAATGATCGTCTCC 1954 Query 1973 TCCTCCATCGATTGGGAGCCTTCTGATGACCTTCTTCGTTCGGGCTCACTTGGCAACTAG 2032 ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| Sbjct 1955 TCCTCCATCGATTGGGAGCCTTCTGATGACCTTCTTCGTTCCGGCTCTCTTGGCAACTAG 2014 Query 2033 TTTAGttttttttttCTTATTGGTAGTCAATAA---GTATTTAGA-TTTAAGATAAGGAC 2088 || |||||||||||||| ||||||||||||||| ||||||||| |||| ||||||||| Sbjct 2015 TTCAGTTTTTTTTTTCT-ATTGGTAGTCAATAACAAGTATTTAGACTTTA-GATAAGGAC 2072 Query 2089 CATAAGGCTAAAAAGTTGAGATCAAATAAGTACCACACTGTGAAACAAAGTAATAAGAAC 2148 |||| |||||||||||||||||| |||||||||| |||||||||||| |||||||||||| Sbjct 2073 CATACGGCTAAAAAGTTGAGATCTAATAAGTACCCCACTGTGAAACATAGTAATAAGAAC 2132 Query 2149 ATATCATAGAGAAACTTTATTTAGATCTTGGCATGTTATTTCAGTAGTCTTTTGTA 2204 |||||||||||||||||||||||||| ||| |||||| ||||||||||||||||| Sbjct 2133 ATATCATAGAGAAACTTTATTTAGATTTTGACATGTTGCTTCAGTAGTCTTTTGTA 2188 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 109336787010 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5