BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg482366
Length=2217
Score E
Sequences producing significant alignments: (Bits) Value
AT2G34230.1 | Symbols: | Protein with domains of unknown funct... 1927 0.0
AT2G34220.1 | Symbols: MEE20 | Protein with domains of unknown ... 1585 0.0
AT2G34240.1 | Symbols: | Protein with domains of unknown funct... 894 0.0
> AT2G34230.1 | Symbols: | Protein with domains of unknown function
(DUF627 and DUF629) | chr2:14454639-14457173 FORWARD LENGTH=2355
Length=2355
Score = 1927 bits (1043), Expect = 0.0
Identities = 1333/1471 (91%), Gaps = 28/1471 (2%)
Strand=Plus/Plus
Query 459 GAAGAAGAAGAATAGCAATGCGGCTGTGACTGTTTCCGAGACAAGTAGTATGGATAATCA 518
|||| |||||||||||||||||| |||||||||||| |||||||||| ||||| ||||||
Sbjct 486 GAAGGAGAAGAATAGCAATGCGGTTGTGACTGTTTCTGAGACAAGTACTATGGCTAATCA 545
Query 519 GATGCTATTGATAAAGAAAGATCCTTCTCATCAGTTGAAATACTTTTGGGTTAATTTGGA 578
|||| |||||| ||||||| |||||| ||| || ||||||| ||||||||||||||||||
Sbjct 546 GATGGTATTGAAAAAGAAAAATCCTTTTCAACAATTGAAATTCTTTTGGGTTAATTTGGA 605
Query 579 TGACAAGACTAAAAGGGATTTTTTGGTAGTAGACTTTCGAAAGCTTATAGACTACATTTT 638
|||||||||||||||||||||||||||||||||||||||||||||||| || || | ||
Sbjct 606 TGACAAGACTAAAAGGGATTTTTTGGTAGTAGACTTTCGAAAGCTTATTGAATATA-TTC 664
Query 639 TG-ATGTGTATGGCAAAGAAGTAAAAGGATATTTTCGGAAATGTGTAGCCACCATCCTCG 697
| ||| ||||||||| ||||||||| |||||||||||||||||||| | || ||||
Sbjct 665 AGAATGAGTATGGCAAGGAAGTAAAACGATATTTTCGGAAATGTGTA---ATCAGCCTC- 720
Query 698 AT-TCAAGTCGA-TGGAGATGCTGGAAGTGCCACATTTGTTCTCAGGTTAACTACTGTTT 755
|| ||| || | ||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 721 ATATCACTTC-ATTGGAGATACTGGAAGTGCCACATTTGTTCTCAGGTTAACTACTGTTT 779
Query 756 TACAGATTGCAAGATGCACATCTTAGATAATCATGTGCACAAATATGAACCCGACTTCAG 815
|||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||
Sbjct 780 TACAGATTGCAAGATGCACATCTTAGATAAGCATGTGCACAAATATGAACCCGAGTTCAG 839
Query 816 TGCTCATCCTAAGTATGTGGATGAGATTTTGGCTGACATGATATGTTGTGGGGACTGGAA 875
|| || ||||||||||||||||||||||||||||||||||||||| |||||||| |||||
Sbjct 840 TGATCGTCCTAAGTATGTGGATGAGATTTTGGCTGACATGATATGCTGTGGGGATTGGAA 899
Query 876 GCCAGTGGATATAGAGAAGGCAGCAAATCTGATCAAGGAGAGAACTAAGAGCCGGATAGA 935
|||||||||||||| | |||||||||||||||| || || |||| |||||||| || |||
Sbjct 900 GCCAGTGGATATAGCGCAGGCAGCAAATCTGATTAATGATAGAATTAAGAGCCAGAAAGA 959
Query 936 GTTTGTTTATGTTAATGGATGGTGTAGTGATTGGCCTGTAGCGAATGAT-AAAGACCGGG 994
||||||||||||||||||||||||||||||||||||||||||| |||| ||| | ||||
Sbjct 960 GTTTGTTTATGTTAATGGATGGTGTAGTGATTGGCCTGTAGCGGGTGATGAAA-AGCGGG 1018
Query 995 AAAATATACTCAAACAGTTTGCGGATGTTCTTAAATCTTCTTGCCCCAAGGAGAATCGTA 1054
||| || |||||||||||| | || ||||||||| |||||||||| | ||||||| |||
Sbjct 1019 AAACCATTCTCAAACAGTTTTCTGAGGTTCTTAAAGCTTCTTGCCCTAGGGAGAATTGTA 1078
Query 1055 CTCTTTCATGTTCCCTTTGGGACTGGTTGATAGATTACACAGAAGAGCATCTCGAACTAC 1114
||||||||||| ||||||||||||||||||| |||||||||||||||||||| || ||||
Sbjct 1079 CTCTTTCATGTACCCTTTGGGACTGGTTGATCGATTACACAGAAGAGCATCTGGATCTAC 1138
Query 1115 CTGGAGTT-CCTGGGAGCTATCTTGATGAATGTAGCTTCTTTAAGAACCCTCAATGCATT 1173
|||||||| || ||||||||||||||| ||||||||||||||||||||||||| |||||
Sbjct 1139 CTGGAGTTTCC-GGGAGCTATCTTGATAAATGTAGCTTCTTTAAGAACCCTCAGTGCATC 1197
Query 1174 TGCTTCTTAGATCTTAAGCACCTTAAACACATCCTCAAATATTTTAGACAGCTCACCACT 1233
||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||||||
Sbjct 1198 TGCTTCTTAGATCTTAAGCACCTTAAACACATCCTCAAAAAATTTAGCCAGCTCACCACT 1257
Query 1234 GATGTCCGCGGAAGTTTGGTTTCAAAAGTAGTGAATCAGCTCTGGGAAAATTCCCAGGTC 1293
|||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1258 GATGTCCGCGAAAGTTTGGTTTCAAAAGTAGTGAATCAGCTCTGGGAAAATTCCCTGGTC 1317
Query 1294 AAGGAAAGAATCGATCTTGAGGGAGTA-ACTACTTATAATCTGCTTCTGGATAAGAGACT 1352
||||||||| |||||||||||||| | |||| || ||||||||||||||||||||||||
Sbjct 1318 AAGGAAAGACTCGATCTTGAGGGAC-ACACTAATTCTAATCTGCTTCTGGATAAGAGACT 1376
Query 1353 GCTGTATGAAGAAGTGCTTGAATTGGATAAGAATGAGACAGTAGAGCATTATCAATCCAC 1412
||||| |||||||| ||||||||||||| ||||||||||||||||||||||| |||||||
Sbjct 1377 GCTGTGTGAAGAAGAGCTTGAATTGGATCAGAATGAGACAGTAGAGCATTATGAATCCAC 1436
Query 1413 TGGAATTTATGAGGATGTGATGCCTAAAGGTGATAAGATCGTCTCTTGGATTCTTGACTG 1472
||| ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||
Sbjct 1437 TGGCATTTATGAGGATGTGATGCCTAAGGGTGATAAGATAGTCTCTTGGATTCTTGACTG 1496
Query 1473 CCCAGAAATCAATAAGGAATTTATGTCTCAA--G-------TGGCAAAGGGCTTACACAA 1523
|||| ||||| |||||||||||||||||||| | |||||||||||||||||||
Sbjct 1497 CCCAAAAATCGATAAGGAATTTATGTCTCAAATGGCAAAGGTGGCAAAGGGCTTACACAA 1556
Query 1524 TCGTGAGATATGGTTAGCAGTTCTGAGAATAGTACAGGGCATGGTTAGGAAAAAGGAAAG 1583
|||||||||||||||||||||| ||||||| ||||||||| |||||||||||||||||||
Sbjct 1557 TCGTGAGATATGGTTAGCAGTTTTGAGAATCGTACAGGGCCTGGTTAGGAAAAAGGAAAG 1616
Query 1584 CTACTATGATAAGAAACGCAGGATGCTAACCTATGAGAAGATGTTGGGTGTGGTAGACAC 1643
||||||||||||| ||| | |||||||| |||||||||||||||| ||| ||| || ||
Sbjct 1617 CTACTATGATAAGCGACGGAAGATGCTAAGCTATGAGAAGATGTTGTGTGAGGTTGAGAC 1676
Query 1644 CATTTGTGACAGAGAAGACACTAGAAAGAATGTTAATCAGCGGAGCACATATGAGTTTTC 1703
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
Sbjct 1677 CATTTGTGACAGAGAAGACACTAGGAAGAATGTTAATCAGCGGAGCACATATGAGTTTGC 1736
Query 1704 GCTTCGAATGAAATGTGAGGAGCTTGTTGGTAAGCAAGATGATGATACAAAAGT-TTTCT 1762
|||||||| | |||||||| ||||||| ||||||||||||||| ||| |||| | |||||
Sbjct 1737 GCTTCGAACGGAATGTGAGAAGCTTGTAGGTAAGCAAGATGATAATAGAAAA-TATTTCT 1795
Query 1763 TGACTGTTGTAAGAGATGTTTTTGTAAGACTATGCACTCCAA-ATTTTAAAGCATTAGAA 1821
||||||||||| |||||||||||||| ||||||| ||||| |||| | |||||||
Sbjct 1796 GGACTGTTGTAAAAGATGTTTTTGTAAAACTATGCCCTCCAGTATTTGGC-GTATTAGAA 1854
Query 1822 GATATGGAGTGTATATCCAAACTCTCTGCTACTGTCCCAAATGATGATGTTAAGAAAAGT 1881
|||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||
Sbjct 1855 GATATGGAGTGTATATCCAAACTCTCTGCTACTGTCTCAAATGATGAAGTTAAGAAAAGT 1914
Query 1882 CTTTTGAGGTTAAGGAAATCGTTGAAAGAGA 1912
| ||||||||||||||||||||||||||||
Sbjct 1915 ATGTTGAGGTTAAGGAAATCGTTGAAAGAGA 1945
Score = 521 bits (282), Expect = 9e-147
Identities = 387/436 (89%), Gaps = 14/436 (3%)
Strand=Plus/Plus
Query 1 ATGATGAAGAATTCAGAG-AAAAGTGATGACAAAGAAACAAAAAAGAAGATTGACGATGC 59
|||||||||||| ||||| |||| | |||||||||||||||||||| ||||||||||||
Sbjct 1 ATGATGAAGAATCCAGAGAAAAAAT-ATGACAAAGAAACAAAAAAGGAGATTGACGATGA 59
Query 60 ATACAATCTTGCCAAAGGCTTCTGGAAAAAAGGTAACCGTATTGAGGCCTTGATGTTAAC 119
||||||||| |||||||||| |||||||||||||||||||||||| ||||||||||||||
Sbjct 60 ATACAATCTCGCCAAAGGCTACTGGAAAAAAGGTAACCGTATTGAAGCCTTGATGTTAAC 119
Query 120 CGAGAAAACGATTTCAGATCATGGGA-GAAACGAATCTTGCTGCTATGTTCACCACGAAC 178
||||||||||||||||||||| |||| ||| |||||||| ||||||||||||||||||||
Sbjct 120 CGAGAAAACGATTTCAGATCAGGGGAAGAA-CGAATCTTCCTGCTATGTTCACCACGAAC 178
Query 179 TTCAAGGTGATATCTTCTATCAGCTTGCGGGAGAAATAGAGTTAGAGATCACCAACGACA 238
| |||||||||||||| ||||| || || | ||||| |||| | ||||||||||||
Sbjct 179 TGCAAGGTGATATCTTTTATCAACTAGCAGAAGAAACAGAG--A----TCACCAACGACA 232
Query 239 TCAAACGCGTATACTTGTTTGCTTCTCTCGATGCGTTTTCAATGTCTATTCTTCTGTGTC 298
||||||| ||||||||||||||||||||||||||||||||||||| || ||||| |||||
Sbjct 233 TCAAACGTGTATACTTGTTTGCTTCTCTCGATGCGTTTTCAATGTTTACTCTTCCGTGTC 292
Query 299 CTGACGCTTTGAGGTCATTTCGTGGCTGTGCTCGTTCGCTAATCGAGTTAGGTGATCAGC 358
||||||||||| ||| |||||||| |||| || |||||||||| |||| ||||||||||
Sbjct 293 ATGACGCTTTGAAGTCCTTTCGTGGTTGTGTTCTTTCGCTAATCCAGTTGGGTGATCAGC 352
Query 359 TTGGGATAAAGAAGTTTTATGAG-AAAGCTGCGTCGAGAGCATGTCAGGGAGTGTCCATA 417
|||||||||||||||||||| || ||||||||||||| ||||| ||||| | ||||| ||
Sbjct 353 TTGGGATAAAGAAGTTTTAT-AGGAAAGCTGCGTCGAAAGCATATCAGGCATTGTCCGTA 411
Query 418 ACAAAA-CCTCA-AGA 431
|| || ||||| |||
Sbjct 412 ACGAATTCCTCAGAGA 427
Score = 180 bits (97), Expect = 6e-44
Identities = 106/110 (96%), Gaps = 1/110 (1%)
Strand=Plus/Plus
Query 1951 GATAAACTGAACAAGATGATGGAAACAAATAGCAATTCAGTTGCTGCAGGAGATTCTGTC 2010
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2077 GATAAACTGAAAAAGATGATGGAAACAAATAGCAATTCAGTTGCTGCAGGAGATTCTGTC 2136
Query 2011 AACATGCAGGGCTAAAATTTT-GGAGGATCATTCTTGCAGATGGAGAAAA 2059
||||||||||||||| ||||| |||||||||||||| |||||||||||||
Sbjct 2137 AACATGCAGGGCTAAGATTTTTGGAGGATCATTCTTCCAGATGGAGAAAA 2186
Score = 159 bits (86), Expect = 8e-38
Identities = 97/102 (95%), Gaps = 1/102 (1%)
Strand=Plus/Plus
Query 2054 AGAAAATAGTGTTTTTATGTTCTCGGAAAAACTTTTGGATTGGAGAGAAAA-CTGTATAT 2112
|||||| ||| |||| ||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 2208 AGAAAACAGTCTTTTAATGTTCTCGGAAAAACTTTTGGATTGGAGAGAAAAACTGTATAT 2267
Query 2113 GAAAATTTGTAGTTTGTTTTAGGACCAGATGCATATATGttt 2154
|||||||||||||||||||||||| |||||||||||||||||
Sbjct 2268 GAAAATTTGTAGTTTGTTTTAGGATCAGATGCATATATGTTT 2309
> AT2G34220.1 | Symbols: MEE20 | Protein with domains of unknown
function (DUF627 and DUF629) | chr2:14450536-14453856 FORWARD
LENGTH=2973
Length=2973
Score = 1585 bits (858), Expect = 0.0
Identities = 1262/1455 (87%), Gaps = 36/1455 (2%)
Strand=Plus/Plus
Query 478 GCGGCTGTGACTGTTTCCGAGACAAGTAGTATGGATAATCAG-ATGCTA-TTGATAAAGA 535
||| ||||| ||||||| || | | ||| ||||||||||||| | | | || |||
Sbjct 1037 GCGACTGTGGCTGTTTCTGATATAGGTACTATGGATAATCAGAAAG-AACCTGGGGAAG- 1094
Query 536 AAGAT-C--CTTCTCATCAG-TTGAA-ATACTTTTGGGTTAATTTGGATGACAAGACTAA 590
||||| | ||| | || || ||||| | | |||||||||| |||||||||||||| ||
Sbjct 1095 AAGATACTTCTTTTGAT-AGATTGAAGA-AGATTTGGGTTAAATTGGATGACAAGACCAA 1152
Query 591 AAGGGATTTTTTGGTAGTAGACTTTCG-AAAGCTTATAGACTACATTTTTGATGTGTATG 649
|| | |||||||||||||||||| | ||||||||||| ||| || ||| | |||
Sbjct 1153 AATAAACTTTTTGGTAGTAGACTTT-GAAAAGCTTATAGGCTATATACAAGATAAGCATG 1211
Query 650 GCAAAGAAGTAAAAGGA-TATTTTCGGAAATGTGTAGCCACCATCCTCGATTCAA--GTC 706
| | ||||||||| || | |||| ||||||| || | |||| | | | | || ||
Sbjct 1212 GGACGGAAGTAAAA-GAGCACTTTCAGAAATGTATA--C-CCAT-CGCCAAT-AATCTTC 1265
Query 707 GATGGAGATGCTGGAAGTGCCACATTTGTTCTCAGGTTAACTACTGTTTTACAGATTGCA 766
|||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1266 GATGGAGATGTTGGAAGTGCCACATTTGTTCTCAGGTTAACTACTGTTTTACGGATTGCA 1325
Query 767 AGATGCACATCTTAGATAATCATGTGCACAAATATGAACCCGACTTCAGTGCTCATCCTA 826
||||||||||||||||||||||||||||||| | |||||| ||||| ||||||| |||||
Sbjct 1326 AGATGCACATCTTAGATAATCATGTGCACAACTCTGAACCTGACTTTAGTGCTCGTCCTA 1385
Query 827 AGTATGTGGATGAGATTTTGGCTGACATGATATGTTGTGGGGACTGGAAGCCAGTGGATA 886
||| |||||||||||||||||||||||||||||| |||||||| |||||||| |||||||
Sbjct 1386 AGTGTGTGGATGAGATTTTGGCTGACATGATATGCTGTGGGGATTGGAAGCCTGTGGATA 1445
Query 887 TAGAGAAGGCAGCAAATCTGATCAAGGAGAGAACTAAGAGCCGG-ATAGAGTTTGTTTAT 945
|| | |||||| |||||| |||||||| ||| ||||| || || | |||||||||||||
Sbjct 1446 CAGCGGAGGCAGAAAATCTTATCAAGGATAGAGCTAAGCGCGGGGA-AGAGTTTGTTTAT 1504
Query 946 GTTAATGGATGGTGTAGTGATTGGCCTGTAGCGAATGATAAAGACCGGGAAAATATACTC 1005
|||||||| ||||||||||||||||||| |||||| ||| || |||||||| |||||
Sbjct 1505 GTTAATGGGTGGTGTAGTGATTGGCCTGAAGCGAAAGATCGCGAGCGGGAAAACGTACTC 1564
Query 1006 AAACAGTTTGCGGATGTTCTTAAATCTTCTTGCCCCAAGGAGAATCGTACTCTTTCATGT 1065
||||||||||| || ||||| ||||||||||| ||||||||||| ||||||||||||||
Sbjct 1565 AAACAGTTTGCCGAGGTTCTAAAATCTTCTTGTGCCAAGGAGAATTGTACTCTTTCATGT 1624
Query 1066 TCCCTTTGGGACTGGTTGATAGATTACACAGAAGAGCATCTCGAACTACCTGGAGTTCCT 1125
|||||||||||||||||| |||||||||||||||| |||| ||||||||||||||||||
Sbjct 1625 ACCCTTTGGGACTGGTTGAGAGATTACACAGAAGAGAATCTGGAACTACCTGGAGTTCCT 1684
Query 1126 GGGAGCTATCTTGATGAATGTAGCTTCTTTAAGAACCCTCAATGCATTTGCTTCTTAGAT 1185
|||| |||||||||| ||||| ||||||||||||||||||||||||| ||||||||||||
Sbjct 1685 GGGATCTATCTTGATCAATGTTGCTTCTTTAAGAACCCTCAATGCATCTGCTTCTTAGAT 1744
Query 1186 CTTAAGCACCTTAAACACATCCTCAAATATTTTAGACAGCTCACCACTGATGTCCGCG-G 1244
|||||||||||| ||||||||||||| |||||||||||||||||||| ||||| |||| |
Sbjct 1745 CTTAAGCACCTTGAACACATCCTCAAGTATTTTAGACAGCTCACCACAGATGTTCGCGCG 1804
Query 1245 AAGTTTGGTTTCAAAAGTAGTGAATCAGCTCTGGGAAAATTCCCAGGTCAAGGAAAGAAT 1304
| |||| ||| ||||||||||||||||| | |||||||||||||||||||||||||||||
Sbjct 1805 A-GTTTAGTTCCAAAAGTAGTGAATCAGTTTTGGGAAAATTCCCAGGTCAAGGAAAGAAT 1863
Query 1305 CGATCTTGAGGGAGTAACTACTTATAATCTGCTTCTGGATAAGAGACTGCTGTATGAAGA 1364
||| |||||||||||| |||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1864 CGACCTTGAGGGAGTAGCTACTTATAATCTGCTTCTGGACAAGAGACTGCTGTATGAAGA 1923
Query 1365 AGTGCTTGAATTGGATAAGA-ATGAGACAGTAGAGCATTATCAATCCACTGGAATTTATG 1423
|| |||||||| |||||||| | | |||||||||||||||| |||| || || |||| ||
Sbjct 1924 AGAGCTTGAATCGGATAAGATAGG-GACAGTAGAGCATTATAAATCTACAGGGATTTTTG 1982
Query 1424 AGGATGTGATGCCTAAAGGTGATAAGATCGTCTCTTGGATTCTTGACTGCCCAGAAATCA 1483
||||||| |||||||| |||||||| |||||||||||||||||||||||||||||||||
Sbjct 1983 AGGATGTAATGCCTAAGGGTGATAAAATCGTCTCTTGGATTCTTGACTGCCCAGAAATCG 2042
Query 1484 ATAAGGAATTTATGTCTCAAGTGGCAAAGGGCTTACACAATCGTGAGATATGGTTAGCAG 1543
|| ||||||| |||||||| ||||||| ||| |||||||| || || ||||||||||||
Sbjct 2043 ATCGGGAATTTGTGTCTCAAATGGCAAACGGCGTACACAATAGTAAGCTATGGTTAGCAG 2102
Query 1544 -TTCTGAGAATAGTACAGG-GCATGGTTAGGAAAAAGGAAAGCTACTATGATAAGAAACG 1601
|| |||||||||||| || | || |||||||||||||||||||||||||||||| |||
Sbjct 2103 CTT-TGAGAATAGTAC-GGTGTGTGATTAGGAAAAAGGAAAGCTACTATGATAAGAGACG 2160
Query 1602 CAGGATGCTAACCTATGAGAAGATGTTGGGTGTGG-TAGACACCATTTGTGACAGAGAAG 1660
| ||||||||||||||||||||||||||||| || | || || ||||||||||||||||
Sbjct 2161 GAAGATGCTAACCTATGAGAAGATGTTGGGTGAGGCT-GAGACGATTTGTGACAGAGAAG 2219
Query 1661 ACACTAGAAAGAATGTTAATCAGCGGAGCACATATGAGTTTTCGCTTCGAATGAAATGTG 1720
||||||| ||||||||||||||||||||||||||||||| | | ||||||||||||||||
Sbjct 2220 ACACTAGGAAGAATGTTAATCAGCGGAGCACATATGAGTCTGCACTTCGAATGAAATGTG 2279
Query 1721 AGGAGCTTGTTGGTAAGCAAGATGATGATACAAAA-GTTTTCTTGACTGTTGTAAGAGAT 1779
|||| ||||| |||||||||||||||||||||||| |||| ||||| |||||||||||||
Sbjct 2280 AGGATCTTGTAGGTAAGCAAGATGATGATACAAAATGTTT-CTTGAGTGTTGTAAGAGAT 2338
Query 1780 GTTTTTGTAAGACTATGCACTCCAAATTTTAAAGCATTAGAAGATATGGAGTGTATATCC 1839
||||||| ||||| | || |||| | ||| ||| ||| ||||||| | |||||||||||
Sbjct 2339 GTTTTTGAAAGACAAAGCTCTCCGAGCTTTGAAGTATTCGAAGATAAGAAGTGTATATCC 2398
Query 1840 AAACTCTCTGCTACTGTCCCAAATGATGATGTTAAGAAAAGTCTTTTGAGGTTAAGGAAA 1899
|||||||| |||||||||| ||||||||||| || |||||||| || | | ||||||||
Sbjct 2399 GAACTCTCTTCTACTGTCCCGAATGATGATGTGAAAAAAAGTCTGTTAACGCTAAGGAAA 2458
Query 1900 TCGTTGAAAGAGAAG 1914
|| |||||||||||
Sbjct 2459 TCACTGAAAGAGAAG 2473
Score = 108 bits (58), Expect = 3e-22
Identities = 80/90 (89%), Gaps = 3/90 (3%)
Strand=Plus/Plus
Query 2066 TTTTATGTTCTCGGAAAAACTTTTGGATTGGAGAGAAA-ACTGTATATGAAAATTTGTAG 2124
|||||||||||||||||| ||||||||| |||||||| | || | ||| |||||||||
Sbjct 2824 TTTTATGTTCTCGGAAAATCTTTTGGATCCGAGAGAAACA-TGG-TGTGAGAATTTGTAG 2881
Query 2125 TTTGTTTTAGGACCAGATGCATATATGttt 2154
|||||||||||| |||||||||||||||||
Sbjct 2882 TTTGTTTTAGGATCAGATGCATATATGTTT 2911
> AT2G34240.1 | Symbols: | Protein with domains of unknown function
DUF627 and DUF632 | chr2:14459157-14461802 FORWARD LENGTH=2316
Length=2316
Score = 894 bits (484), Expect = 0.0
Identities = 889/1077 (83%), Gaps = 57/1077 (5%)
Strand=Plus/Plus
Query 463 AAGAAGAATAGCAATGCGGCTGTGACTGTTTCCGAGACAAGTAGTATGGATAATCAGATG 522
|||||| || || |||||||||||||||||||||| ||| ||| | ||| ||||| ||||
Sbjct 496 AAGAAG-AT-GC-ATGCGGCTGTGACTGTTTCCGATACAGGTACTTTGGCTAATCGGATG 552
Query 523 CTATTGATAAAGAAAGATCCTTC---TCATC-AGTTGAAATA-CTTTTGGGTTAATTTGG 577
|| |||||||||||||||||| | ||| | ||| || | ||||||||||||| |||
Sbjct 553 GTAACGATAAAGAAAGATCCTTCTTTTGATCTA-TTG-AAGACCTTTTGGGTTAATCTGG 610
Query 578 ATGACAAGACTAAAAGGGATTTTTTGGTAGTAGACTT-TCGAAAGCTTATAGACTACAT- 635
|||||||||| ||||| || ||||||| ||||| || | ||||||||||||||| ||
Sbjct 611 ATGACAAGACCAAAAGAGAACTTTTGGTGGTAGA-TTCTAGAAAGCTTATAGACT--ATG 667
Query 636 TTTTG-ATGTGTATG--GCAAAGAAGTAAAAGGATATTTTCGGAAATGTGTAGCCACCAT 692
| | || ||||| | | | |||| |||| | ||||| ||||||||||| | | |
Sbjct 668 TAGAGAATAAGTATGTTG-ACA-AAGTGAAAGAAGATTTTGGGAAATGTGTA-TC-CGTT 723
Query 693 -CCTCGATTCAAGTCGATGGAGATGCTGGAAGTGCCACATTTGTTCTCAGGTTA-ACTAC 750
|| | || ||||||||||| |||||||||||||||||||||||||| || |||||
Sbjct 724 GCCAATAATC--TTCGATGGAGATACTGGAAGTGCCACATTTGTTCTCAGG-TATACTAC 780
Query 751 TGTTTTACAGATTGCAAGATGCACATCTTAGATAATCATGTGCACAAATATGAACCCGAC 810
||||||||||||||| ||| ||||||||||||||| |||||||| |||| || ||||||
Sbjct 781 TGTTTTACAGATTGCCAGAGGCACATCTTAGATAACCATGTGCAAAAATTTGTACCCGA- 839
Query 811 T-TCAGTGCTCATCCTAAGTATGTGGATGAGATTTTGGCTGACATGATATGTTGTGGGGA 869
| |||||||| |||||||| ||||||| || | || ||||||||||||||||||||| |
Sbjct 840 TCCCAGTGCTCGTCCTAAGTGTGTGGATAAGGTATTAGCTGACATGATATGTTGTGGGAA 899
Query 870 CTGGAAGCCAGTGGATATAG-AGAAGGCAGCAAATCTGATCAAGGAGAGAACTAAGAGC- 927
||| |||| ||| ||| || || ||||||||||||||||||||| ||| ||||| ||
Sbjct 900 ATGGGAGCCTGTGAATACAGTAG-CGGCAGCAAATCTGATCAAGGATAGAGCTAAGCGCG 958
Query 928 CGGATAGAGTTTGTTTATGTTAATGGATGGTGTAGTGATTGGCCTGTAGCGAATGATAAA 987
||| ||||||||||||||||||||||||||||||||||||||||| ||| || ||| ||
Sbjct 959 GGGA-AGAGTTTGTTTATGTTAATGGATGGTGTAGTGATTGGCCTGAAGCTAAGGATGAA 1017
Query 988 GACCGG-GAAAATATACTCAAACAGTTTGCGGATGTTCTTAAATCTTCTTGCCCCAAGGA 1046
|| ||| | ||| ||||||||||||||||| | ||||||||||||||||| || ||
Sbjct 1018 GAGCGGAGTAAA-ATACTCAAACAGTTTGCTCAGGTTCTTAAATCTTCTTGT---AATGA 1073
Query 1047 GAATCG-TACTCTTTCATGTTCCCTTTGGGACTGGTTGATAGATTACACAGAAGAGCA-T 1104
||| | ||||||||||||| |||||||||||| ||||||| ||||||||||| || | |
Sbjct 1074 AAAT-GATACTCTTTCATGTACCCTTTGGGACTCGTTGATATATTACACAGAA-AGGAAT 1131
Query 1105 CT-CGAACTACCTGGAGTTCCTGGGAGCTATCTTGATGAATGTAGCTTCTTTAAGAACCC 1163
|| | |||||| || |||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1132 CTGC-AACTACTTGAAGTTCCTGGGAGCTATCTTGATAAATGTAGCTTCTTTAAGAACCC 1190
Query 1164 TCAATGCATTTGCTTCTTAGATCTTAAGCACCTTAAACACATCCTCAAATATTTTAGACA 1223
||| ||||| |||||||||||||||||||||||| ||||||||||||| |||||||||||
Sbjct 1191 TCAGTGCATCTGCTTCTTAGATCTTAAGCACCTTGAACACATCCTCAACTATTTTAGACA 1250
Query 1224 GCTCACCACTGATGTCCGCG-GAAGTTTGGTTTCAAAAGTAGTGAATCAGCT-CTGGGAA 1281
||||||||| |||||||||| || |||| ||| |||||||||||||| || | |||||||
Sbjct 1251 GCTCACCACAGATGTCCGCGCGA-GTTTAGTTCCAAAAGTAGTGAAT-AGGTTCTGGGAA 1308
Query 1282 AATTCCCAGGTCAAGGAAAGAATCGATCTTGAGGGAGTAACTACTTATAATCTGCTTCTG 1341
||||||| ||||||||||| ||||| | ||||| || | || | | ||||||||||||
Sbjct 1309 AATTCCCGGGTCAAGGAAACAATCGGTATTGAGCGACTTAC-A-TC-TAATCTGCTTCTT 1365
Query 1342 GATAAGAGACTGCTGTATGAAGAAGTGCTTGAATTGGATAAGA-ATGAGACAGTAGAG-C 1399
||| ||||||||||| |||||||| || | | || ||| | | | | || |||||| |
Sbjct 1366 GATGGGAGACTGCTGTGTGAAGAAGAGCATCATTTTGATGACACAGG-GAGTGTAGAGAC 1424
Query 1400 ATTATCAA-TCCACTGGAATTTATGAGGATGTGATGCCTAAAGGTGATAAGATCGTCTCT 1458
|| | || |||| ||||||||||||| ||||||| ||| | || || ||||| |||||
Sbjct 1425 TTT-T-AAGTCCAGTGGAATTTATGAGCATGTGATACCTGAGGGGGACAAGATGGTCTCC 1482
Query 1459 TGGATTCTTGACTGCCCAGAAATCAATAAGGAATTTATGTCTCAAGTGGCAAAGGGC 1515
||| |||| |||||||||||||| || || || || |||||||| ||| | |||||
Sbjct 1483 TGGGTTCTCGACTGCCCAGAAATGGATGAGAAACTTGTGTCTCAAATGGGAGAGGGC 1539
Score = 283 bits (153), Expect = 4e-75
Identities = 320/397 (81%), Gaps = 26/397 (7%)
Strand=Plus/Plus
Query 1 ATGATGAAGAATTCAGA-GAAAAGTGATGACAAAGAAACAAAAAAGAAGATTGACGATGC 59
|||| ||||| |||||| | ||||||| |||| ||||||| ||||||||| || || ||
Sbjct 4 ATGACGAAGAGTTCAGATG-AAAGTGACGACAGTGAAACAATAAAGAAGATCGAGGAAGC 62
Query 60 ATAC-AATCTTGCCAAAGGC-TTCTGGAAAAAAGGT-AACCGTATTGAGGCCTT-GATGT 115
| | || ||||||| || | || | | ||| |||| || || ||| |||| || || ||
Sbjct 63 AGCCGAA-CTTGCCAGAGACTTTTTAG-AAAGAGGTGAA-CGCATTAAGGCTTTGGA-GT 118
Query 116 TAACCGAGAAAACGATTTCAGATCATGGGAGA-AACGAATCTTGCTGCTATGT-TCACCA 173
||||||||||||||||||| |||||| ||| | ||||| ||||| | | | ||||||
Sbjct 119 TAACCGAGAAAACGATTTCTGATCATAGGA-ATCACGAAAGTTGCT--T-T-TCTCACCA 173
Query 174 CGAACTTCAAGGTGATATCTTCTATCAGCTTGCGGGAGAAATAGAGTTAGAGATCACCAA 233
|||||| |||||||||| ||| | | ||||| || || | | |||| | ||
Sbjct 174 CGAACTGCAAGGTGATACCTT-T-T----TTGCGCTAG-CCTA-TGAAACAGAT-AACAC 224
Query 234 CGACATCAAACGCGTATACTTGTTTGCTTCTCTCGATGCGTTTTCAATGTCTATTCTTCT 293
|||| ||||| |||||||||||||||||||| ||||||| | |||| |||||||||||||
Sbjct 225 CGACGTCAAATGCGTATACTTGTTTGCTTCTGTCGATGCATATTCAGTGTCTATTCTTCT 284
Query 294 GTGTCCTGACGCTTTGAGGTCATTTCGTGGCTGTGCTCGTTCGCTAATCGAGTTAGGTGA 353
||||||||||||||||||||| |||||||||| |||||||||| | ||| |||| |||||
Sbjct 285 GTGTCCTGACGCTTTGAGGTCCTTTCGTGGCTATGCTCGTTCGATGATCCAGTTGGGTGA 344
Query 354 TCAGCTTGGGATAAAGAAGTTTTATGAGAAAGCTGCG 390
||||||| ||||||| ||||||||| |||||||||||
Sbjct 345 TCAGCTTCGGATAAACAAGTTTTATAAGAAAGCTGCG 381
Score = 228 bits (123), Expect = 2e-58
Identities = 187/217 (86%), Gaps = 8/217 (4%)
Strand=Plus/Plus
Query 1579 GAAAGCTACTATGATAAGAAACGCAGGATGCTAACCTATGAGAAGATGTTGGGTGTGG-T 1637
||||||||||||||||||| || || ||| |||||||||| ||||||||||||| || |
Sbjct 1540 GAAAGCTACTATGATAAGAGACATAGAATGGTAACCTATGATAAGATGTTGGGTGAGGCT 1599
Query 1638 AGACACCATTTGTGACAGAGAAGACACTAGAAAGAATGTTAATCAGCGGAGCACATATGA 1697
|| ||||||||| |||||||||||| ||| ||||||||||||||||||||||||||||
Sbjct 1600 -GAAACCATTTGTAACAGAGAAGACAATAGGAAGAATGTTAATCAGCGGAGCACATATGC 1658
Query 1698 GTTTTCGCTTCGAATGAAATGTGAGGAGCTTGTTG-G-TAAGCAAGATGATGATACAAAA 1755
|| |||| |||||||| |||||||||||||| | | || |||||||||||||| |||
Sbjct 1659 GTCAGCGCTGCGAATGAAGTGTGAGGAGCTTGTAGTGATA--CAAGATGATGATACCAAA 1716
Query 1756 -GTTTTCTTGACTGTTGTAAGAGATGTTTTTGTAAGA 1791
|||| ||||| |||||||||||||||| ||| ||||
Sbjct 1717 TGTTT-CTTGAATGTTGTAAGAGATGTTCTTGAAAGA 1752
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 109989394095
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5