BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg482410 Length=802 Score E Sequences producing significant alignments: (Bits) Value AT2G34480.1 | Symbols: | Ribosomal protein L18ae/LX family pro... 1269 0.0 AT3G14600.1 | Symbols: | Ribosomal protein L18ae/LX family pro... 501 4e-141 > AT2G34480.1 | Symbols: | Ribosomal protein L18ae/LX family protein | chr2:14532708-14534239 REVERSE LENGTH=823 Length=823 Score = 1269 bits (687), Expect = 0.0 Identities = 766/803 (95%), Gaps = 9/803 (1%) Strand=Plus/Plus Query 1 TCATTTATAAACTAGAAGAACCCTAGCCGCATATATTTATTTGGTTGAGGTTTCTACCGC 60 ||||||||||| ||||||||||||||||| | || ||||||||||||||||| ||||| Sbjct 1 TCATTTATAAAGAAGAAGAACCCTAGCCGC-T-TA--TATTTGGTTGAGGTTTCCACCGC 56 Query 61 ATTGTCTCTCTCCAGACGAAAAATGGGTGCTTTCAGGTTTCACCAGTACCAGGTTGTGGG 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 57 ATTGTCTCTCTCCAGACGAAAAATGGGTGCTTTCAGGTTTCACCAGTACCAGGTTGTGGG 116 Query 121 AAGAGCTCTACCGACAGAGAAGGATGTGCAGCCTAAGATTTACCGGATGAAGCTCTGGGC 180 ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 117 AAGAGCTCTCCCGACAGAGAAGGATGTGCAGCCTAAGATTTACAGGATGAAGCTCTGGGC 176 Query 181 CACGAACGAGGTTCGTGCCAAGTCCAAGTTCTGGTATTTCTTAAGGAAGCTCAAGAAGGT 240 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 177 TACGAACGAGGTTCGTGCCAAGTCCAAGTTCTGGTATTTCTTGAGGAAGCTCAAGAAGGT 236 Query 241 CAAGAAGAGTAACGGACAGATGCTCGCCATCAACGAGATCTATGAGAAGAATCCAACAAC 300 ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 237 GAAGAAGAGTAATGGACAGATGCTCGCCATCAACGAGATCTATGAGAAGAACCCAACAAC 296 Query 301 GATCAAGAACTTCGGTATTTGGTTGAGGTACCAGAGCAGAACTGGGTACCACAACATGTA 360 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 297 GATCAAGAACTTCGGTATTTGGTTGAGGTACCAGAGTAGAACTGGGTACCACAACATGTA 356 Query 361 CAAGGAATACCGTGACACCACTCTTAACGGAGCTGTTGAACAGATGTACACTGAGATGGC 420 |||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 357 CAAGGAGTACCGTGACACCACTCTTAACGGAGCTGTTGAGCAGATGTACACTGAGATGGC 416 Query 421 TTCTCGTCACCGTGTCAGATTCCCTTGCATTCAGATCATCAAGACAGCCACTGTCCCTGC 480 || ||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 417 ATCCCGTCACCGTGTCAGATTCCCTTGCATTCAGATCATCAAGACAGCCACTGTCCCAGC 476 Query 481 CAAGCTGTGCAAGAGAGAGAGCACTAAACAGTTCCACAACAGCAAGATCAAGTTCCCATT 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 477 CAAGCTGTGCAAGAGAGAGAGCACTAAACAGTTCCACAACAGCAAGATCAAGTTCCCATT 536 Query 541 GGTGTTCCGCAAGGTTAGACCACCAAGCAGGAAGCTGAAGACGACTTACAAGGCCAACAA 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 537 GGTGTTCCGCAAGGTTAGACCACCAAGCAGGAAGCTGAAGACGACTTACAAGGCCAACAA 596 Query 601 GCCCAACTTGTTCATGTAAAACGTCTCTGATTGACTCTTTTTTGGGGTGGAATCGATGTT 660 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 597 GCCCAACTTGTTCATGTAAAACGTCTCTGATTGACTCTTTTTTGGGGTGGAATCGATGTT 656 Query 661 GAAGCTATGCTCTCTGTTGTTTTTGATCTTT-TCGGATATTTTTGTTTATCATCAATATG 719 |||||| |||||||| ||||| ||| ||| |||| ||||||||||| | |||||||| Sbjct 657 GAAGCTGTGCTCTCTCCCGTTTTGGAT-TTTATCGGTTATTTTTGTTT-T--TCAATATG 712 Query 720 TTAGGCGTACTCATGAAACTCAACTCGACTTTGTCTGGATTTTATGGTTCTTGTTTCCTG 779 ||||||||||||||||| | ||||||||||||||||||||||||| |||||||||||| Sbjct 713 TTAGGCGTACTCATGAATGTGAACTCGACTTTGTCTGGATTTTATGCTTCTTGTTTCCTA 772 Query 780 CTTATGaaaaaaaCTTTCCCTTA 802 |||||||||||| |||||||||| Sbjct 773 CTTATGAAAAAACCTTTCCCTTA 795 > AT3G14600.1 | Symbols: | Ribosomal protein L18ae/LX family protein | chr3:4910697-4912173 FORWARD LENGTH=853 Length=853 Score = 501 bits (271), Expect = 4e-141 Identities = 457/546 (84%), Gaps = 16/546 (3%) Strand=Plus/Plus Query 81 AAATGGGTGCTTTCAGGTTTCACCAGTACCAGGTTG-TGGGAAGAGCTCTACCGACAGAG 139 ||||||||| |||| ||||||||||||| ||||| | |||| ||||| || ||||||||| Sbjct 75 AAATGGGTGGTTTCCGGTTTCACCAGTATCAGGTGGTTGGG-AGAGCCCTCCCGACAGAG 133 Query 140 AAGGATGTGCAGCCTAAGATTTACCGGATGAAGCTCTGGGCCACG-AACGAGGT-TCGTG 197 || |||| ||| |||||||| ||| |||||||||| |||| | | || || || | | | Sbjct 134 AACGATGAGCACCCTAAGATCTACAGGATGAAGCTTTGGGGTA-GAAATGAAGTAT-GCG 191 Query 198 CCAAGTCCAAGTTCTGGTATTTCTTAAGGAAGCTCAAGAAGGTCAAGAAGAGTAACGGAC 257 ||||||||||||||||||| ||| | ||||| || |||||||| ||||| || ||||||| Sbjct 192 CCAAGTCCAAGTTCTGGTACTTCATGAGGAAACTGAAGAAGGTGAAGAAAAGCAACGGAC 251 Query 258 AGATGCTCGCCATCAACGAGATCTAT-GAGAAGAATCCAACAACGATCAAGAACTTCGGT 316 ||||||| |||||||| ||||| | | |||||||| ||||| || |||||||||| ||| Sbjct 252 AGATGCTTGCCATCAATGAGAT-TTTCGAGAAGAACCCAACGACCATCAAGAACTACGGG 310 Query 317 ATTTGGTTGAGGTACCAGAGCAGAACTGGGTACCACAACATGTACAAGGAATACCGTGAC 376 || |||||| | || |||||| |||||||||||||||||||||||||||| ||||||||| Sbjct 311 ATCTGGTTGCGTTATCAGAGCCGAACTGGGTACCACAACATGTACAAGGAGTACCGTGAC 370 Query 377 ACCACTCTTAACGGAGCTGTTGAACAGATGTACACTGAGATGGCTTCTCGTCACCGTGTC 436 || || || || || | || || ||||||||||||||||||||||||||||| | || Sbjct 371 ACAACACTCAATGGTGGAGTGGAGCAGATGTACACTGAGATGGCTTCTCGTCATAGAGTG 430 Query 437 AGATTCCCTTGCATTCAGATCATCAAGACAGCCACTGTCCCTGCCAAGCTGTGCAAGAGA 496 || |||||||||||||||||||||||||| || ||||||||||| ||||| ||||||||| Sbjct 431 AGGTTCCCTTGCATTCAGATCATCAAGACTGCGACTGTCCCTGCAAAGCTTTGCAAGAGA 490 Query 497 GAGAGCACTAAACAGTTCCACAACA-GCAAGATCAAGTTCCCA-TTGGTGTTCCGCAAGG 554 |||| ||| || |||||||| ||| | |||||||||||||| ||| | ||| | |||| Sbjct 491 GAGATCACCAAGCAGTTCCATAACTCG-AAGATCAAGTTCCCTCTTGTT-TTCAGGAAGG 548 Query 555 TTAGACCACCAAGCAGGAAGCTGAAGACGACTTACAAGGCCAACAAGCCC-AAC-TTGTT 612 | |||||||||||||||||||| ||||| || |||||||| | ||| || ||| || || Sbjct 549 TCAGACCACCAAGCAGGAAGCTTAAGACTACATACAAGGC-ATCAAAACCTAACCTT-TT 606 Query 613 CATGTA 618 |||||| Sbjct 607 CATGTA 612 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 39031932219 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5