BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg482424 Length=1079 Score E Sequences producing significant alignments: (Bits) Value AT2G34610.1 | Symbols: | unknown protein; BEST Arabidopsis tha... 1424 0.0 > AT2G34610.1 | Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G30190.1); Has 342 Blast hits to 279 proteins in 74 species: Archae - 0; Bacteria - 7; Metazoa - 76; Fungi - 18; Plants - 51; Viruses - 0; Other Eukaryotes - 190 (source: NCBI BLink). | chr2:14575392-14576517 FORWARD LENGTH=1126 Length=1126 Score = 1424 bits (771), Expect = 0.0 Identities = 996/1098 (91%), Gaps = 41/1098 (4%) Strand=Plus/Plus Query 11 CCTCAAGGCTCAA-TTCTCAAATCCAATGCCCAACTCATCACGAGCTATCCCTGAAAATG 69 |||||||| |||| || ||||||||||||||||||| |||| |||||||||||||||||| Sbjct 19 CCTCAAGGTTCAATTTTTCAAATCCAATGCCCAACTTATCAGGAGCTATCCCTGAAAATG 78 Query 70 ACAGAAATGCCCTCGTACGTTGTTGGAAA-CCCTATTTTCGAGCCTTACAAGCCCAAGAA 128 |||||||||||||||||||||| | |||| ||| | ||||||||||||||||||||| Sbjct 79 ACAGAAATGCCCTCGTACGTTG-TCGAAACCCCCCTCTTCGAGCCTTACAAGCCCAAG-- 135 Query 129 ACAACAATACAAATTGTACTCTTCGTTGCTCCCGATCATCTTATCTATCTTCACCTACAT 188 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 136 A-AACAATACAAATTGTACTCTTCGTTGCTCCCGATCATCTTATCTATCTTCACCTACAT 194 Query 189 TTTGATCTTCCACGTTCTCGACGTGTCTCCTTTGTCGATCTTCAACGACACGAAGATCTT 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 195 TTTGATCTTCCACGTTCTCGACGTGTCTCCTTTGTCGATCTTCAACGACACGAAGATCTT 254 Query 249 GTTTGTCATCTCCAACGCACTTATCATCATCATAGCCGCCGATTACGGAGCATTCACTGA 308 ||| ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| Sbjct 255 GTTCGTCATCTCCAACGCACTTATCATCATCATTGCCGCCGATTACGGTGCATTCACTGA 314 Query 309 TAAAGAGAACCACGATTTTTACGGAGAATACACAGCCTCGATGACAAGAGG-TGCACGAG 367 |||||||||| ||||||||||||||||||||||||| |||||| ||| || ||||| || Sbjct 315 CAAAGAGAACCTCGATTTTTACGGAGAATACACAGCCGCGATGAGAAG-GGATGCACAAG 373 Query 368 AAAACCCTAGACCGGAAAACTTGGGATATCGGGTG-GATATGGCGGAAGAAATCAAGAAC 426 ||||||||||||||||||| | || ||| ||||| | |||||||||||||| ||||||| Sbjct 374 AAAACCCTAGACCGGAAAAGTCGGTCTATGGGGTGAG-TATGGCGGAAGAAACCAAGAAC 432 Query 427 CGTGAGAAACAAGAAGAACTAACGGGAGAAAGAGACTTACAACTTCAGTATTTGCCTAAC 486 |||||||||||||||| || | ||||| |||||||||||| |||||||||||||||| Sbjct 433 CGTGAGAAACAAGAAGGACCAGTGGGAGCGAGAGACTTACAAGATCAGTATTTGCCTAAC 492 Query 487 AAGAAAGCGAAAGTTCCTGAGAGAATCATTCAAGCCGTGAGCAAGAACCAACCGAGAAAC 546 ||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| Sbjct 493 AAGAAAGCGAAAGTTACTGAGAGAATCATACAAGCCGTGAGCAAGAACCAACCGAGAAAC 552 Query 547 ACAA-CTATCCAAAAGT-TCGAGCCAATGACTGAGAAAAACATTCCTATAAAAGCTGCCA 604 | || | || |||||| | |||||| |||||||| |||| ||| ||||| |||||| | Sbjct 553 A-AAGCCATTGAAAAGTGT-GAGCCAGTGACTGAGCAAAATGTTCATATAATAGCTGCAA 610 Query 605 AAGAAGAAACTTGCAT-G-AA-C--TCT-A--AAC-C----G--TACGGGAGAAGCAAAT 649 ||||||||||||||| | || | ||| | ||| | | |||||| ||||||||| Sbjct 611 AAGAAGAAACTTGCAACGCAAGCAATCTGATGAACTCTAAAGCCTACGGGCGAAGCAAAT 670 Query 650 CGGATAAGGCTCGTGGGTCAATGGTAACCAAGGAAAGCCGTCGTCAAGACATCAAACATA 709 |||||||||||||||||||| || || |||||||| | ||||||||||| |||||||||| Sbjct 671 CGGATAAGGCTCGTGGGTCAGTGATATCCAAGGAACGTCGTCGTCAAGAGATCAAACATA 730 Query 710 GACCTAAAAGTTACGATCGAAGCCAGTCGGATAGCTCGAAATGGATGGTTGTTCACAAGG 769 ||| ||||||||||||||| || || |||||||||||||||||||||||||||||||||| Sbjct 731 GACATAAAAGTTACGATCGGAGTCAATCGGATAGCTCGAAATGGATGGTTGTTCACAAGG 790 Query 770 TGACA-AAGGCTGA-G-G-AGATGGAG-ATGGCGACGAAGAAGTGGGAGAATGTAAGAGA 824 || | |||||||| | | |||||||| | |||||||||||||||||||||||||| ||| Sbjct 791 GGA-AGAAGGCTGACGAGGAGATGGAGGA-GGCGACGAAGAAGTGGGAGAATGTAAAAGA 848 Query 825 AGAGTCGGAGGAGTTCTCGAAGATGTCAAACGAGGAGTTGAACAGACGAGTCGAAGATTT 884 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 849 AGAGTCGGAGGAGTTCTCGAAGATGTCGAACGAGGAGTTGAACAGACGAGTCGAAGATTT 908 Query 885 CATCCAACGGTTCAATCGAGATATCAAACGACAAATTTAGTTTAATGTAATTTGTTGTTG 944 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 909 CATCCAACGGTTCAATCGAGATATCAAACGACAAATTTAGTTTAATGTAATTTGTTGTTG 968 Query 945 TACCGATACGGCAAATTTAGTCAACCTTTTTGTGTCATTTCCTTC--TTCTTCTT-TTTT 1001 |||| ||||||||||||||||||||||||||||||| |||||||| || || || |||| Sbjct 969 TACCAATACGGCAAATTTAGTCAACCTTTTTGTGTCGTTTCCTTCCCTTTTT-TTCTTTT 1027 Query 1002 GTCATTCTTGCATCTTGTTTATTAGAGTTGGTAATGAGATCATGGAGATAATTAATCGTT 1061 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 1028 GTCATTCTTGCATCTTGTTTATTAGAGTTGGTAATGAGATCATGGAGATA-TTAATCGTT 1086 Query 1062 AGTTTAATTTCAATGGTT 1079 ||||||||||||| |||| Sbjct 1087 AGTTTAATTTCAAGGGTT 1104 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 52861173885 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5