BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg482434 Length=722 Score E Sequences producing significant alignments: (Bits) Value AT2G34700.1 | Symbols: | Pollen Ole e 1 allergen and extensin ... 979 0.0 > AT2G34700.1 | Symbols: | Pollen Ole e 1 allergen and extensin family protein | chr2:14634134-14635627 REVERSE LENGTH=722 Length=722 Score = 979 bits (530), Expect = 0.0 Identities = 664/725 (92%), Gaps = 24/725 (3%) Strand=Plus/Plus Query 1 TCTCTCTTTCTCACTAACAAAGAACAAAAATGGTTTTGGTAATAAAAGCTCTCAAATATC 60 ||| ||||| ||||||||||||||||||||||| | |||||| ||||||||||||||||| Sbjct 2 TCTATCTTTTTCACTAACAAAGAACAAAAATGGGTCTGGTAACAAAAGCTCTCAAATATC 61 Query 61 TCTTACTCCTTTCTATCTCCTTGACTTTCATCTACACCAATGAAGTGTCATCCACTTCTC 120 |||||||||||||||| ||||||||||||||||||||||||| ||| |||||| |||||| Sbjct 62 TCTTACTCCTTTCTATTTCCTTGACTTTCATCTACACCAATGCAGTTTCATCCGCTTCTC 121 Query 121 CGGTGACGACTCCACCGTCTTCGCCGG-TGAAGATGAGCCGGAGACTTGTGGCAGTTGAA 179 | | |||||||||||| ||||||| | ||||||||| |||||||||||||||||||| Sbjct 122 C---AATGACTCCACCGTCATCGCCGGCT-AAGATGAGCAGGAGACTTGTGGCAGTTGAA 177 Query 180 GGCATGGTTTATTGCAAGTCTTGCAAGTATTCCGGCGTCGATACTCTCTTGGAAGCATCT 239 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 178 GGCATGGTTTATTGCAAGTCATGCAAGTATTCCGGCGTCGATACTCTCTTGGAAGCATCT 237 Query 240 CCTCTTCAAGCACTATGCTTAAGGAGCGACGGTAAAGCTTGCATGCAACAACACAAAGAG 299 | | | || | | |||||||||| ||||||||||||||||||||||||||||| Sbjct 238 -C-C-T------CT-T-C--AAGGAGCGACCGTAAAGCTTGCATGCAACAACACAAAGAG 284 Query 300 AGGTGTGACAATGGAGAC-AAAACAGACAAAAACGGATACTTCTTCATGTTAGCCCCCAA 358 |||||||||||||||||| |||||||||||||||||||||||||||||| ||||||| || Sbjct 285 AGGTGTGACAATGGAGACAAAAACAGACAAAAACGGATACTTCTTCATGCTAGCCCCAAA 344 Query 359 AAAACTCACGACCTACGCTTTCCACACGTGCCGGGCTTGGCCCACGAATCCCGGACCCAC 418 ||||||||| |||||||||||||||||||||||||||||||| |||||||| |||||||| Sbjct 345 AAAACTCACCACCTACGCTTTCCACACGTGCCGGGCTTGGCCTACGAATCCTGGACCCAC 404 Query 419 GACTGCAACGATGACATGCACCGTCCCGTCAAAGCTCAACAATGGAATCACTGGTGCTAT 478 |||||||||||||||||||||||| ||||||||||||||||||||||| || |||||||| Sbjct 405 GACTGCAACGATGACATGCACCGTGCCGTCAAAGCTCAACAATGGAATAACCGGTGCTAT 464 Query 479 GCTTAAGCCTTCTAAAACAATCAACATCGGTGAACACGACTACGTTCTCTTCTCTGTTGG 538 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 465 GCTTAAGCCTTCTAAGACAATCAACATCGGTGAACACGACTACGTTCTCTTCTCTGTTGG 524 Query 539 TCCCTTCGCGTTTGAGCCTGCCTGTACTCGTTGAAGACTAGAATTTCGTTTTATGTATTT 598 ||||||||||||||||||||||||| ||| |||||||||| | ||||||||||||||||| Sbjct 525 TCCCTTCGCGTTTGAGCCTGCCTGTGCTCTTTGAAGACTATACTTTCGTTTTATGTATTT 584 Query 599 G-TGTGTGGTTGATTGTTATAATGATGATCACTATCTAGTGTTTTTAATGATGTGTCTTG 657 | |||||| ||||||||||||||||||||||||| ||| |||||||| | ||||||| Sbjct 585 GGTGTGTGCTTGATTGTTATAATGATGATCACTA----GTGATTTTAATGTTCTGTCTTG 640 Query 658 TTTGTTTTCTTGGTACGTTTCTATTTAAAATTTGTGTGTGTTGACATTTTAAGATCGTTA 717 ||||||||||||||||||||| |||| |||||||||||| |||||||| ||||||||||| Sbjct 641 TTTGTTTTCTTGGTACGTTTCCATTTGAAATTTGTGTGTTTTGACATTATAAGATCGTTA 700 Query 718 CTGTG 722 |||| Sbjct 701 GTGTG 705 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 35013200459 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5