BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg482441
Length=4091
Score E
Sequences producing significant alignments: (Bits) Value
AT2G34780.1 | Symbols: EMB1611, MEE22 | maternal effect embryo ... 5869 0.0
> AT2G34780.1 | Symbols: EMB1611, MEE22 | maternal effect embryo
arrest 22 | chr2:14668653-14673904 FORWARD LENGTH=4191
Length=4191
Score = 5869 bits (3178), Expect = 0.0
Identities = 3840/4149 (93%), Gaps = 88/4149 (2%)
Strand=Plus/Plus
Query 1 ATGGCGGCGGCCAATGCTCCACCTGAGCTGGCTTCAGGGAACCCTTGCTGCGTCGCGTGG 60
|||||| || ||||||||||||||||||| |||||||| |||||||||||| |||| |||
Sbjct 1 ATGGCGACGACCAATGCTCCACCTGAGCTAGCTTCAGGAAACCCTTGCTGCCTCGCTTGG 60
Query 61 CAAGGGAAGTACATAGGAATGAAGAAGAGGCGAGATGCTTTTAGAGAAGCCGTAACTCTT 120
||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||
Sbjct 61 CAAGGGAAGTACATAGGAATGAAGAAGAGGCGAGATGCTTTTAAAGAAGGAGTAACTCTT 120
Query 121 CTCCAGAAGGCCATAGCAGATGCTAATACTGAGAAATCCAATCTCGAGAAAAAACTTGGG 180
||||||||||| |||| | ||| |||| |||| |||||||||||||||| |||| |||||
Sbjct 121 CTCCAGAAGGCTATAGAAAATGTTAATGCTGAAAAATCCAATCTCGAGAGAAAATTTGGG 180
Query 181 GAGATGGCGGTTGACAGAGGCACTAAGGCAAATGATTCAACGGT-AACAGCATCTTTGGA 239
||||||||| |||| ||| ||||||| ||||| |||||| || || ||||||||||||
Sbjct 181 GAGATGGCGACTGACGGAGATACTAAGGAAAATGGTTCAACTGTGAA-AGCATCTTTGGA 239
Query 240 GAAAGAAATATCTGGTTTGAAGTCTGAGATATTGTCATTGCAACAACAATTGGAGCGGAA 299
||||||||||||| ||||||||| ||||||| |||| ||||||||| || ||||||||||
Sbjct 240 GAAAGAAATATCTCGTTTGAAGTTTGAGATAGTGTCTTTGCAACAAAAACTGGAGCGGAA 299
Query 300 CCTTAAAGAAAAAAGTCAAGAAACAAAGCTTCTTCAGGATCAAGCTTCTCGTCGAGAAAA 359
|||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||
Sbjct 300 CCTTAAAGAAAAAAGTGAAGAAACAAAGCTTCTTCAGGATCAAGCTTCTGGTCGAGAAAA 359
Query 360 GGAGATCAGTGAACTAAAGGATCTCCTTAAGAAAGAAACATTAAGGGCAGATAATTCTGA 419
|||||||| |||||| | ||||||||||||||||||||||||||||||||||| ||||||
Sbjct 360 GGAGATCAATGAACTGAGGGATCTCCTTAAGAAAGAAACATTAAGGGCAGATAGTTCTGA 419
Query 420 AGAAGAGAGGGAGCATGCTTTTAAGGAACTGAACAAGGCAAAGGCTCTGATAGTAAAAGA 479
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 420 AGAAGAGAGGGAACATGCTTTTAAGGAACTGAACAAGGCAAAGGCTCTGATAGTAAAAGA 479
Query 480 TGAGGAGATCAAGCCACATGTTCCTGAAGTGAGAAA-GGAAATCAGTCTGGTTAAAAATC 538
|||||| ||| ||| | || |||||||||| | ||| |||||| ||||||||||||||||
Sbjct 480 TGAGGAAATCGAGCAAGATATTCCTGAAGT-AAAAAGGGAAATAAGTCTGGTTAAAAATC 538
Query 539 TTCTTGCAAGTgagaggcagaagacagagtcagagagaaagaaagcagaatcagagaaaa 598
||||||| |||||||| |||||||||||||||||||| ||||||||||||||||||||||
Sbjct 539 TTCTTGCTAGTGAGAGACAGAAGACAGAGTCAGAGAGGAAGAAAGCAGAATCAGAGAAAA 598
Query 599 aTAAAGCTGATCAGTATCTTTCCGAGTTGGAGGTCTTAAGAACTTCAGCTCATAAGACTA 658
| ||||||||| |||||||||| ||||||||||| ||||||| |||||||||||||||||
Sbjct 599 AGAAAGCTGATAAGTATCTTTCGGAGTTGGAGGTGTTAAGAAATTCAGCTCATAAGACTA 658
Query 659 GTTCTGATTTGCTTATTTTAACCTCCAATCTTGAGACTATaaaaaagcagcttgagcttg 718
|||||||||| |||| ||| |||||||||||||||||| |||||||||||||||||||||
Sbjct 659 GTTCTGATTTACTTACTTTGACCTCCAATCTTGAGACTGTAAAAAAGCAGCTTGAGCTTG 718
Query 719 aaaaacaaaagacactgaaagagaaaaaaCGTGCAGATATGGAGAGTGCAAAAGCTAGGG 778
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 719 AAAAACAGAAGACACTGAAAGAGAAAAAACGTGCAGATATGGAGAGTGCAAAAGCTAGGG 778
Query 779 ACCAGATGAAGCTGGCAGAAGGTTTGTCTAAGAAGTTTGAAATCGTTAAAGCAAGAAATG 838
||||||||||||||||||||| | |||||||||||||||||||||||| |||||||||||
Sbjct 779 ACCAGATGAAGCTGGCAGAAGATGTGTCTAAGAAGTTTGAAATCGTTAGAGCAAGAAATG 838
Query 839 AAGAGCTCATGAAAGAAATGGAATCGCAGAGCGCTAGTAGCAAAGTAAAATTTGCTGAAA 898
||||||||| |||||||||||||||||||| |||||||||| |||| || ||||||||||
Sbjct 839 AAGAGCTCAAGAAAGAAATGGAATCGCAGACCGCTAGTAGCCAAGTGAAGTTTGCTGAAA 898
Query 899 ACTCGGAAAAACTGGAAGAGAAGATAAGGCTCCTTGAGATGAATAAGAAAACAGCCATGG 958
|||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 899 ACTCGGAAAAGCTGGAAGAGAAGATAAGGCTCCTTGAGATGAATAAAAAAACAGCCATGG 958
Query 959 ACTGGAAATCTCGTGCTGATGATCTGACTCAGCAGTTACAAGAAGCGCAATTAGT-GACT 1017
|||||||||||||| |||||||||||||||| ||||||||||||||||||||||| | ||
Sbjct 959 ACTGGAAATCTCGTACTGATGATCTGACTCAACAGTTACAAGAAGCGCAATTAGTCG-CT 1017
Query 1018 GAAGGTTTGAAGAAACAAGTGCATGAGCTTTCACTTTCCCAAAAATCCATCAAGACTCAC 1077
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1018 GAAGGTTTGAAGAAACAAGTGCATGAGCTTTCACTTTCCCAGAAATCCATCAAGACTCAC 1077
Query 1078 TCTATCTCTCCTCAGGGAGTCAGAGACCTGGAAAAGGCTGAAATGAGGCTTTTGaaaaaa 1137
||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1078 TCTATTTCTCCTCAGAAAGTCAGAGACCTGGAAAAGGCTGAAATGAGGCTTTTGAAAAAA 1137
Query 1138 aaGCTGAAGTTTGAGAGAAATTGTGCAAAACACTCTGAAACAGTGGCTAAATTTGAAAAA 1197
||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1138 AAGATGAAGTTTGAGAGAAATTGTGCAAAACACTCCCAAACAGTGGCTAAATTTGAAAAG 1197
Query 1198 TTTCGAAGGGAATTTCAGGGCGAAGAGCTAGGTCGGCTGAAACTGGAGTTTGGTAGTCTT 1257
|||||||||||||||||| ||||||||||||||||| ||||||||||||| |||||||||
Sbjct 1198 TTTCGAAGGGAATTTCAGTGCGAAGAGCTAGGTCGGTTGAAACTGGAGTTCGGTAGTCTT 1257
Query 1258 ACAAATCGCATGAATCTACTCAATGAGTATTTTTCAAGAGGCGTTGAAGGTACAGCTGGC 1317
|| ||||||||||||||||| ||||||||||||||| || |||||||||||||||||||
Sbjct 1258 ACGAATCGCATGAATCTACTGGATGAGTATTTTTCAACAGACGTTGAAGGTACAGCTGGC 1317
Query 1318 CTTGAAAAGGCTACAGGATGCAGGAAACTGCAGACGCTCCCAT-CACAGAAGAACCGTAA 1376
|||| |||||||||||||||||||||||||| |||||| || ||||||||||||||||
Sbjct 1318 CTTGGAAAGGCTACAGGATGCAGGAAACTGCTGACGCTAA-ATTCACAGAAGAACCGTAA 1376
Query 1377 TGGTGAAAAGCATTCTGACGCAAGATGCAATTTGGTTGCCAGCTCTGGTTCTCGGGAGCA 1436
|||||||||||||||||||||||||||||| ||||| |||||||| |||| || ||||||
Sbjct 1377 TGGTGAAAAGCATTCTGACGCAAGATGCAAATTGGTAGCCAGCTCAGGTTATCAGGAGCA 1436
Query 1437 GGCATGCAAGTTGTCTGCCCACTTAATTTCTAAATCTGGACGGGGCGTGAGTGAGTCTGG 1496
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1437 GGCTTGCAAGTTGTCTGCCCACTTAATTTCTAAATCTGGACGGGGCGTGAGTGAGTCTGT 1496
Query 1497 CTCAGGTACTATTTCTCAATTGGAGTCTCCTACTGGAGGCTCTAGAAAATTACAGAGTTC 1556
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1497 CTCAGGTACTATTTCTCAATTGGAGTCTCCTACTGGAGGCTCTAGAAAATTACCGAGTTC 1556
Query 1557 TGGAGTTATTTCCAGCGAAACATCTTTTTCTGATGGGCAGTTACTGGCCTCACAGGGAAG 1616
|||||| |||||||||| |||||||||||||||||||||||||||||| |||||||||||
Sbjct 1557 TGGAGTAATTTCCAGCGCAACATCTTTTTCTGATGGGCAGTTACTGGCATCACAGGGAAG 1616
Query 1617 AGAGCAGTTCTCTGTTACGACTTCAGCAGAAATAGCAAAAGATAAACCGAATATCCAACC 1676
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1617 AGAGCAGTTCTCTGTTACTACTTCAGCAGAAATAGCAAAAGATAAACCGAATATCCAACC 1676
Query 1677 AACAAAATCAAGTATGTTCCAGAAA-ATCTCTGATACCAGTAAAAATGGAAATCTCTGTT 1735
|||||||||||||||| |||| ||| ||||| ||||||||||||||||||||||||||||
Sbjct 1677 AACAAAATCAAGTATGCTCCA-AAAGATCTCCGATACCAGTAAAAATGGAAATCTCTGTT 1735
Query 1736 TGGTGGCTGAAAACTATCTTCAAAGGCGTCAGAGAGATAGTCATGAGGTAGTTGATGAGA 1795
||||||| |||||||||||||||||| |||||||||||| ||||||| | |
Sbjct 1736 TGGTGGCAGAAAACTATCTTCAAAGGTGTCAGAGAGATATTCATGAG--A----A----- 1784
Query 1796 ACTCTCGGAAAAGAAAAAGAATGTTAGAGGCAGTTGTGTCTCGTAAGCATTTGTCATCTG 1855
||||||||||||||||||||||||||||||||||||||| | ||||||| || ||||||
Sbjct 1785 -CTCTCGGAAAAGAAAAAGAATGTTAGAGGCAGTTGTGTCCCATAAGCATCTGGCATCTG 1843
Query 1856 ATGATAACAAGAAAAATTTGCAGATTGGAAAGAAGATGAGC-CGCTTGCAGTCTATGGTT 1914
|||||| ||||||||||||| ||||||| |||||||| || | ||||||||| ||| ||
Sbjct 1844 GTGATAAAAAGAAAAATTTGCCGATTGGAGAGAAGATGGGCAC-CTTGCAGTCCATGATT 1902
Query 1915 TTAGGAACTGGGTCTAGGCCTTTAGAAAAGGAAGAAACCTTGGTCCC---TGATAGGCAA 1971
||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||
Sbjct 1903 GTAGGAACTGGGTCTAGGCCTTCAGAAAAGGAAGAAACCTTGGTCCCCCCTGATAGGCAA 1962
Query 1972 GGTGGCTCCTTCGCA---G---TT----T--CCAAGAAAAGAAGGGTTTCTTGTAAGAAG 2019
|||||||||| |||| | || | |||||||||||||||||||||||||||||
Sbjct 1963 GGTGGCTCCTCCGCAATTGACATTACAGTTTCCAAGAAAAGAAGGGTTTCTTGTAAGAAG 2022
Query 2020 AAGACAATTATACAGAATTCTCTTGAGTTCAACCAGTCAGGCAAGACTCCAGGTAATATA 2079
|||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2023 AAGATAATTGTACAGAATTCTCTTGAGTTCAACCAGTCAGGCAAGACTCCAGGTAATATA 2082
Query 2080 GCTGGGAAAACTACGTGCCTCTCTACTGCCAAAGGACATGACGTGACAACATTATTTCCA 2139
||||||||||||||||| ||||||||||| | ||||||||||||| |||||||||| |
Sbjct 2083 GCTGGGAAAACTACGTGTCTCTCTACTGCTACTGGACATGACGTGAAAACATTATTTTCG 2142
Query 2140 GAGGACGTTGCTGCTACAGATTATATGAAGTTGCTAGAGTTAGATAACTTGGAAGAAGAA 2199
|||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 2143 GAGGACTTTGCTGCTACAGATTATATGAAGTTGCTAGAGTTGGATAACTTGGAAGAAGAA 2202
Query 2200 AATTATTACCAGATGGCTAGAGAATCGCTTCTGTCCCCTGATCTTCCTCAGGTAGATTTT 2259
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2203 AATTATTACCAGATGGCTAGAGAATCGCTTCTGTCCCCTGATCTTCCTCAGGTAGATTTT 2262
Query 2260 TTGGGT-GTTGAGATCGTGAATGA---CAAAAATCCTGCTAGGGCTCTTGACTTGGCTGC 2315
|||||| || |||||| ||||||| ||||||||||||||||||| |||||||||||||
Sbjct 2263 TTGGGTTGT-GAGATCATGAATGAGGACAAAAATCCTGCTAGGGCTATTGACTTGGCTGC 2321
Query 2316 CAGTAATAGCATGTGTTTACGTGAGACCATACTTTCTAGTGAATCTCCTAGTCTCAACAC 2375
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2322 CAGTAATAGCATGTATTTACGTGAGACCATACTTTCTAGTGAATCTCCTAGTCTCAACAC 2381
Query 2376 TCTGAATGAT-T---T-A--GT-GA----C-ACC---GTTG---C------ATGGGCATA 2410
|| |||| || | | | || || | ||| |||| | ||||||||
Sbjct 2382 TCAGAAT-ATCTCAGTGACAGTTGAAATGCCACCCATGTTGAAACCGTTGCATGGGCATC 2440
Query 2411 TTCTTAAACACTTTGTTGTGTTTTCAAATATTGAAGACCAGAAAAGTATCATCAAAATT- 2469
|||||||||||||| |||||||||||||||||||||||||||| |||||||||| |||
Sbjct 2441 TTCTTAAACACTTTATTGTGTTTTCAAATATTGAAGACCAGAACAGTATCATCATAATAA 2500
Query 2470 TTCCATGCAACAAACAATTGTGTACAGCGATGCCCGTCAGTTACTAGAGAACAGTGGGCA 2529
||| |||| || ||||||||| ||||||| |||||||||||||||| |||||||||||||
Sbjct 2501 TTC-ATGCTACTAACAATTGTCTACAGCGTTGCCCGTCAGTTACTAAAGAACAGTGGGCA 2559
Query 2530 GTGCCAGCGATTCTGTCTTCTTTGAAAATGGAAGAAAACCTTTTGGCCCGGGAAAGGGTC 2589
|||||||||||| |||||||||||||||||||||||||||||||||||| |||||||| |
Sbjct 2560 GTGCCAGCGATTTTGTCTTCTTTGAAAATGGAAGAAAACCTTTTGGCCCAGGAAAGGGCC 2619
Query 2590 TGTGTGTTCCTCTCCTTGCTGCTGCATAACTTCTCCATGGTTCCCTCAACGAAAA-TCAG 2648
|||||||||||||||||| |||||||||||||||||||||||| | |||| |||| | |
Sbjct 2620 TGTGTGTTCCTCTCCTTGTTGCTGCATAACTTCTCCATGGTTCACACAACAAAAACTGGG 2679
Query 2649 CAATTCTCTGAATGTTGATTCTTTCTCCTGCTTGGATTCTTTCTCAAAGCATATATATGG 2708
||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 2680 -AATACTCTGAATGTTGATTCTTTCTCCTGCTTGGATTCTTTCTCAAAGCATATACGTGG 2738
Query 2709 AGTTATGGCTGATACTGAAGCTGGAGTTATGCTTTCTGAATTTTCGGAAGAACTCCTTAG 2768
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
Sbjct 2739 TGTTATGGCTGATACTGAAGCTGGAGTTATGCTTTCTGGATTTTCGGAAGAACTCCTTTG 2798
Query 2769 TCTTCTTCAGGACCTCCTTTCTGCGCAGAGGGTGTTATTTTCTGTTAAACCCTCAGAAAC 2828
||||||||||||||||||||||| |||| |||| |||||||| |||||| ||||||||||
Sbjct 2799 TCTTCTTCAGGACCTCCTTTCTGGGCAGCGGGTATTATTTTCGGTTAAATCCTCAGAAAC 2858
Query 2829 ATCTGAATCTGATTTAAGCATTTCTGTCACCCTGAATGGAGGATATGTAGCTCTCGTCAA 2888
|| |||||||||||||||||| |||||||||||||||||| | ||||||||||||||||
Sbjct 2859 ATGTGAATCTGATTTAAGCATCCCTGTCACCCTGAATGGAGAAAATGTAGCTCTCGTCAA 2918
Query 2889 CAAAATCGCTCTAATTGATCATTTGGTGGCCGGAAGCACTATTTTGGCAGCAATATGTAC 2948
|||||||||||||| |||||| ||||||||||||||| |||||||||| |||||||||||
Sbjct 2919 CAAAATCGCTCTAACTGATCAATTGGTGGCCGGAAGCGCTATTTTGGCGGCAATATGTAC 2978
Query 2949 TGCACTTGATCGTGTTGGATATATCTGCGAAGCTTCCTTTGAAATCCTGCACAAGTACAG 3008
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2979 TGCACTTGATCGTATTGGATATATCTGCGAAGCTTCCTTTGAAATCCTGCACAAGTACAG 3038
Query 3009 TCATGAGAATACCTCAGTGCTACTGACCATTCTTCACGTTTTTGCTTACATTGCTGGAGA 3068
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3039 TCATGAGAAAACCTCAGTGCTACTGACCATTCTTCACGTTTTTGCTTACATTGCTGGAGA 3098
Query 3069 GAAAATGGTGTTGTCTAGTGAGCATGACATATCAATTGCAGTGTTGAAATCCATTGTCAT 3128
|||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||
Sbjct 3099 GAAAATGGTGTTGTCTAGTGAGCATGGCATATCAATTGCAGTGTTGAAATACATTGTCAT 3158
Query 3129 GTTTCTAGAAAACAAACATTTTGGTACTGTGGAGGACAATTCTC-AGTTGCACCCAGGCA 3187
||||||||||||||||||||||||||||||||||| || ||||| | |||||||||||||
Sbjct 3159 GTTTCTAGAAAACAAACATTTTGGTACTGTGGAGGGCAGTTCTCGA-TTGCACCCAGGCA 3217
Query 3188 AGATCAAGTGTCCATTCTCAGACAGGTCTTCCTCGCTGGAGGCTATGGCATCGAAGCTCA 3247
||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 3218 AGAACAAGTGTCCATTCTCAGACAGGTCTTCCTCGCTGGAGGCTATGGCATCTAAGCTCA 3277
Query 3248 TGGAAATTCTTCAGGAGTTTACTCAGTCTTATAGTTTGCATCAAAGCTTGACTGGTTCAT 3307
|||||||||||||||| |||||| ||||| ||| ||||||| ||||||||||||||||||
Sbjct 3278 TGGAAATTCTTCAGGAATTTACTGAGTCTAATACTTTGCATAAAAGCTTGACTGGTTCAT 3337
Query 3308 TGGGTTCTAGTCACCTAGAGAAGACCGAGTTTAGGCCGGCACACAAAGATTTCCAGTGTG 3367
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3338 TGGGTTCTAGCCACCTAGAGAAGACCGAGTTTAGGCCGGCACACAAAGATTTCCAGTGTG 3397
Query 3368 TATTGACCAGGGATCAAAGTGTTAATCTCTGTGACATTCTGTCATTGGTGGAGCTTATTG 3427
|||||||||||||||||||| | ||||||||||||||||| |||||||||||||||||||
Sbjct 3398 TATTGACCAGGGATCAAAGTATCAATCTCTGTGACATTCTATCATTGGTGGAGCTTATTG 3457
Query 3428 CTTGTTATACGGCATGGGATTGGACTAGTGCGAACATTGTTGCTCCACTGCTTAAGATAC 3487
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 3458 CTTGTTATACGGCTTGGGATTGGACTAGTGCGAACATTGTTGCTCCACTGCTTAAGATGC 3517
Query 3488 TGGGAATGCCATTGCCAATGAACCTCTCTGTTGCAATCGTCTCCCTTCTTGGGCAACTTA 3547
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3518 TGGGAATGCCATTGCCAATGAACCTCTCTGTTGCAATCGTCTCCCTTCTTGGGCAACTTA 3577
Query 3548 GCAGTATTGGAGTGGATGCTGGTGGCTATGAAAACAAAGGAATCTCAAACTTGAGAGCGA 3607
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||
Sbjct 3578 GCAGTATTGGAGTGGATGCTGGTGGCTATGAAAACGAAGGAATCTCAAACTTGAGAGTGA 3637
Query 3608 AACTGTCAGCATTTCTGCAGTGTGAGACGACACTAAAGGCCGGTTTTGCAGTGCAGATAG 3667
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 3638 AACTGTCAGCATTTCTACAGTGTGAGACGACACTAAAGGCCGGTTTTGCAGTGCAGATAG 3697
Query 3668 CAACTGTGAGCTCCCTCCTGAAGACGCAGCAGCTGAAGTTCCCAATAGATTTTCAAGACA 3727
||||||||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||
Sbjct 3698 CAACTGTGAGCTCCCTCCTGAAGACGCTGCAGCTGAAATTCCCAATAGACTTTCAAGACA 3757
Query 3728 AAACCACCATGATTCCGGGTAGTGGCGACCAAAGCTTATCTGGTTCAGTCAATGTGGTGA 3787
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3758 AAACCACCATGATTCCGGGTAGTGGCGACCAAAGCTTATCTGGTTCAGTCAATGTGGTGA 3817
Query 3788 CCAAGTGGTTGTCGTTGTTGAGCAATGAACAACGAGTTTTCGCTTTTGAGTT-CTTACAA 3846
||||||||||||||||||||||||| ||||||||||||||||| |||||||| || ||||
Sbjct 3818 CCAAGTGGTTGTCGTTGTTGAGCAAGGAACAACGAGTTTTCGCATTTGAGTTTCT-ACAA 3876
Query 3847 ATTTCTGTTGTTAGATGATTCCTCAGTTCAAAAAGTCATCATCAAAAGCGGTAAAATTTT 3906
| |||||||||||||||||||||||||||||||||||| ||| || ||||| ||||
Sbjct 3877 ACCAATGTTGTTAGATGATTCCTCAGTTCAAAAAGTCATCA--AAA-GCAGTAAA-TTTT 3932
Query 3907 TGGAGATAGTCTCTTAATGTTTGATTCTTCATTGACTGATTCCTTTGGTTC-TAGGATG- 3964
||| ||||||||||| ||||||||||||||||||||| ||||||||| | |||||||
Sbjct 3933 -GGACATAGTCTCTTACTGTTTGATTCTTCATTGACTGCCTCCTTTGGT-CATAGGATGA 3990
Query 3965 --CAGATATGAATGAAGATTGCATTGAGTTTCCAATTTTTTCTATTATTTAAAATTGGGG 4022
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
Sbjct 3991 TGCAGATATGAATGAAGATTGCATTGAGGTTCCAATTTTTTCTATTATTTAAAATTGGAG 4050
Query 4023 CTTTGTGTTTGTGGTGACATTAGTACAAAACAGTAAACGATATGTGGCTAATTCAGAATC 4082
||||||||||||||||||| ||||| ||| || || ||||| |||| ||||||||||||
Sbjct 4051 CTTTGTGTTTGTGGTGACAATAGTATAAACCACTACACGATTTGTGTCTAATTCAGAATG 4110
Query 4083 TTAAGCAAA 4091
|||||||||
Sbjct 4111 TTAAGCAAA 4119
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 203878456352
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5